RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELAPOR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056004

Ensembl transcript IDs: ENSMUST00000069538.14, ENSMUST00000115348.9, ENSMUST00000134991.8, ENSMUST00000152095.8, ENSMUST00000154662.8, ENSMUST00000155764.8

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGGTGCTTTTACTTCCAGGCCCACACGGAATGCAAGCTTCCTTaGCATAGACCTGGTGGATGGACAGGTAGGTGTCAGCTGGACACT +
Preference number: 1 (lower is better)
Translates to: PGCFYFQAHTECKLP*HRPGGWTGRCQLDT
Trigger: AGTGTCCAGCTGACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGCCTGGAAGTAAAAGCACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 90 bp CAGGCCCACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTT +
Preference number: 1 (lower is better)
Translates to: QAHTECKLPCHRPGG*TGRCQLDTPCTGWF
Trigger: AAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR GCA 90 bp AAAGCGAGTGGTCCTGGGTGCTTTTACTTCCAGGCCCACACGGAATaGAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGT +
Preference number: 1 (lower is better)
Translates to: KASGPGCFYFQAHTE*KLPCHRPGGWTGRC
Trigger: ACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 90 bp AGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTTGGTTTCCTTCTCAATGTAGTGGCC +
Preference number: 1 (lower is better)
Translates to: SFLAIDLVDGQVGVS*TLLALVGFLLNVVA
Trigger: GGCCACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 90 bp CGGAGGGCAGGGATGGCAAGAAGACGATCCATTGTTATAGAATCCTaGGTTGCAAGGAGGACAATCCTTCTTCTCTCCAGAAGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: RRAGMARRRSIVIES*VARRTILLLSRRGQ
Trigger: CTGCCCCCTTCTGGAGAGAAGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATAACAATGGATCGTCTTCTTGCCATCCCTGCCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 90 bp TACAGCCATCTGGCCTGCTGTCAGAAGGGCCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAAATCCTGCCGGCAATTCATCCCATT +
Preference number: 1 (lower is better)
Translates to: YSHLACCQKGPPQCP*MLQRWKILPAIHPI
Trigger: AATGGGATGAATTGCCGGCAGGATTTTCCAACGTTGCAACATTCATGGACACTGTGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR GCA 90 bp TATATTCAAACCCAAGTGCTGGCTCTGTTCCGGCCGGACATGACTTaGATTCCTTTGTTCCATCTGAAAACGTCCCCGGAGGGCAGGGAT +
Preference number: 1 (lower is better)
Translates to: YIQTQVLALFRPDMT*IPLFHLKTSPEGRD
Trigger: ATCCCTGCCCTCCGGGGACGTTTTCAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 90 bp CTGATTTCAGCATTACAGAATGGGAGCCCCATTCTCCATTGTCTGTaGGCTTCACCCACTTGTCTGTGGTGGCATCCATCTCCTGGCACT +
Preference number: 1 (lower is better)
Translates to: LISALQNGSPILHCL*ASPTCLWWHPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR GCA 90 bp ATAGAAAGTAGAAGGTACAACCATCACAGGTGCCAGCTGGACACTTaGTGGGGACTGATATCACACCTGCACCAGGTCTCATGGGATTAC +
Preference number: 1 (lower is better)
Translates to: IESRRYNHHRCQLDT*WGLISHLHQVSWDY
Trigger: GTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTGATGGTTGTACCTTCTACTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR TCA 90 bp CCACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTaGAGCAGGAAGTTTTCATGTTGGCAGGGAGGACATTCCACCATT +
Preference number: 1 (lower is better)
Translates to: PPPNRSFHRTWNSQH*SRKFSCWQGGHSTI
Trigger: AATGGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR CCA 90 bp AGGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTaGCTCTATCCACTTGTACATTATCTGTGTCTTCCCTTCTTCGTC +
Preference number: 1 (lower is better)
Translates to: RGQPNSICEILPADF*LYPLVHYLCLPFFV
Trigger: GACGAAGAAGGGAAGACACAGATAATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR GCA 90 bp TGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTGACACCTAAAAACATATCTGCCAGA +
Preference number: 1 (lower is better)
Translates to: WLGDTGNISSLILTF*KAVSTVTPKNISAR
Trigger: TCTGGCAGATATGTTTTTAGGTGTCACTGTTGACACTGCCTTGCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR TCA 90 bp ACAGCATTGTCTCTTCATATATTGGGGCATCTTGAGGATTTCAGCTaGACAGACTCAAAGTGGTCATCTTTTTCCTTTGTGGCCAAAGAC +
Preference number: 1 (lower is better)
Translates to: TALSLHILGHLEDFS*TDSKWSSFSFVAKD
Trigger: GTCTTTGGCCACAAAGGAAAAAGATGACCACTTTGAGTCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATATGAAGAGACAATGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR TCA 90 bp GGTCCTGAATGCTACAGCATTGTCTCTTCATATATTGGGGCATCTTaGGGATTTCAGCTGAACAGACTCAAAGTGGTCATCTTTTTCCTT +
Preference number: 1 (lower is better)
Translates to: GPECYSIVSSYIGAS*GFQLNRLKVVIFFL
Trigger: AAGGAAAAAGATGACCACTTTGAGTCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATATGAAGAGACAATGCTGTAGCATTCAGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR GCA 90 bp TTGACCTTGGTTTGTCCTCTGGAACGCCCATGTAAATGTAAACGTTaGATTCTTGAATATGACATGCGTATAAGCTTGCTTTTCTTTGGT +
Preference number: 1 (lower is better)
Translates to: LTLVCPLERPCKCKR*ILEYDMRISLLFFG
Trigger: ACCAAAGAAAAGCAAGCTTATACGCATGTCATATTCAAGAATGCAACGTTTACATTTACATGGGCGTTCCAGAGGACAAACCAAGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGTCGTTCCCTTGGAGGTaGAGCTGGGGCCATTCATCA +
Preference number: 2 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAESFPWR*SWGHSS
Trigger: TGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGA...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGTTGCCCACTTGTCTGTGGTaGCATCCATCTCCTGGCACT +
Preference number: 2 (lower is better)
Translates to: PLEVKLGPFISEPTLLRLPTCLW*HPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGG...CAACCTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR TCA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGTGTTCCGGCCGGACATaGCTTGCATTCCTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAECSGRT*LAFLCS
Trigger: GGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACA...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp ACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCCATGATGAGGCCGACTaGTCAGAGCCCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: TRNASFLAIDLVDGQVGVHDEAD*SEPRAQ
Trigger: CTGTGCCCTGGGCTCTGAGCAGTCGGCCTCATCATG...GACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp CCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGTTGTGCCAGCTGGACACTTaGTGGGGACTGATATCACAC +
Preference number: 2 (lower is better)
Translates to: PLEVKLGPFISEPTLLRLCQLDT*WGLISH
Trigger: GTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCA...CAACCTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGAGCCTGGTTTGTTGCTaGAAGTGCCTGGCTTACATG +
Preference number: 2 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAESLVCC*KCLAYM
Trigger: CATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCT...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp GCCCACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: AHTECKLPCHRPGGWTGRHRPGG*TGRCQL
Trigger: CAGCTGACACCTACCTGTCCATCCACCAGGTCTATG...CCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp AAACGTCCCCGGAGGGCAGGGATGGCAAGAAGACGATCCATTGTTATAGAATCCTCGTTCCCTTGGAGGTaGAGCTGGGGCCATTCATCA +
Preference number: 2 (lower is better)
Translates to: KRPRRAGMARRRSIVIESSFPWR*SWGHSS
Trigger: TGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGA...GGATTCTATAACAATGGATCGTCTTCTTGCCATCCCTGCCCTCCGGGGACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGTGCTACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 2 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAECYPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTAGCA...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp CACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTGAAGCAGGAGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: HLPTVHSIALGIPNIEAGASGPG*FYFQAH
Trigger: GTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGC...TCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp TTATATTCAAACCCAAGTGCTGGCTCTGTTCCGGCCGGACATGACTTGCATTCCGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LYSNPSAGSVPAGHDLHSASGPG*FYFQAH
Trigger: GTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGC...GGAATGCAAGTCATGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAATATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp GCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAACATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: ARMIDCDDRAARKPLLSEHRPGG*TGRCQL
Trigger: CAGCTGACACCTACCTGTCCATCCACCAGGTCTATG...TTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCATGATGAGGCCGACTaGTCAGAGCCCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: TCYKAISIFASSSHWHTSHDEAD*SEPRAQ
Trigger: CTGTGCCCTGGGCTCTGAGCAGTCGGCCTCATCATG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp AAACGTCCCCGGAGGGCAGGGATGGCAAGAAGACGATCCATTGTTATAGAATCCTACAACCATCACAGGTaGCAGCTGGACACTTGCTGG +
Preference number: 2 (lower is better)
Translates to: KRPRRAGMARRRSIVIESYNHHR*QLDTCW
Trigger: CCAGCAAGTGTCCAGCTGGCACCTGTGATGGTTGTA...GGATTCTATAACAATGGATCGTCTTCTTGCCATCCCTGCCCTCCGGGGACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp CACAGGTGCCAGCTGGACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 2 (lower is better)
Translates to: HRCQLDTCWGLISHLHQVSVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...GACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CCA 90 bp GATGGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCCAGAGCCTGCATGAATaGTGTATGGCCCTTGATGGA +
Preference number: 2 (lower is better)
Translates to: DGQVGVSWTLLALVGFLLQSLHE*CMALDG
Trigger: TCCATCAAGGGCCATACACCATTCATGCAGGCTCTG...GAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR TCA 90 bp CATGGTAGAAAAAGCAGTCGCTATAGCAAAGCGAGTGGTCCTGGGTGCTTTTACGCGAGCCTACACTGCTaGGGTTGCGGAAGTCATAGT +
Preference number: 2 (lower is better)
Translates to: HGRKSSRYSKASGPGCFYASLHC*GCGSHS
Trigger: ACTATGACTTCCGCAACCTCAGCAGTGTAGGCTCGC...GTAAAAGCACCCAGGACCACTCGCTTTGCTATAGCGACTGCTTTTTCTACCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp ACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCTCATCTTCACAGCATCGTTCCCTTGGAGGTaGAGCTGGGGCCATTCATCA +
Preference number: 2 (lower is better)
Translates to: TDITPAPGLMGLHLIFTASFPWR*SWGHSS
Trigger: TGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGA...TGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp CCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGTTGATTTGTGTAATCATCTaGCCCTGTCACCATTTCCTT +
Preference number: 2 (lower is better)
Translates to: PLEVKLGPFISEPTLLRLICVII*PCHHFL
Trigger: AAGGAAATGGTGACAGGGTCAGATGATTACACAAAT...CAACCTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGGTACTTGGCTCGGTaGCACTGGGAACATATCCTC +
Preference number: 2 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFWYLAR*HWEHIL
Trigger: GAGGATATGTTCCCAGTGTCACCGAGCCAAGTACCA...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp AGTTCCGAACCTGTGGCTCCAGTCATAGACGTTGGTGGTTTAAATCCTGGGATGACTGGCTCCTTCCTCTaGAAACTGGGAGTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: SSEPVAPVIDVGGLNPGMTGSFL*KLGVLL
Trigger: AAGGAGGACTCCCAGTTTTCAGAGGAAGGAGCCAGT...CATCCCAGGATTTAAACCACCAACGTCTATGACTGGAGCCACAGGTTCGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACGATAGCACAGCTGTCTaGAGCTGGGAGTTCACACTC +
Preference number: 2 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYDSTAV*SWEFTL
Trigger: GAGTGTGAACTCCCAGCTGCAGACAGCTGTGCTATC...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCTGCAGTGCTCTGGTTaGTGCCTGGTGAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: TCYKAISIFASSSHWHTSLQCSG*CLVRRD
Trigger: ATCCCTCCTCACCAGGCACCAACCAGAGCACTGCAG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp CGAACCTGTGGCTCCAGTCATAGACGTTGGTGGTTTAAATCCTGGGATGTGCAACAAAGCGAGTGGTCCTaGGTGCTTTTACTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: RTCGSSHRRWWFKSWDVQQSEWS*VLLLPG
Trigger: GCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTTG...TTGCACATCCCAGGATTTAAACCACCAACGTCTATGACTGGAGCCACAGGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACCAAAGCGAGTGGTCCTaGGTGCTTTTACTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDQSEWS*VLLLPG
Trigger: GCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTTG...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CAA 90 bp TTTGTGCCTGATTTCAGCATTACAGAATGGGAGCCCCATTCTCCATaGTCTGTGAGCTTCACCCACTTGTCTGTGGTGGCATCCATCTCC +
Preference number: 2 (lower is better)
Translates to: FVPDFSITEWEPHSP*SVSFTHLSVVASIS
Trigger: GGAGATGGATGCCACCACAGACAAGTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAAATCAGGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR CAA 90 bp GTGTATGCCACCCCTTCGATGGTGATATTCTTTACTAGCACGGGCTaGACTGCCTTAGAACCCATAAGGATGCCTGTCGTTCTCCAGTAC +
Preference number: 2 (lower is better)
Translates to: VYATPSMVIFFTSTG*TALEPIRMPVVLQY
Trigger: GTACTGGAGAACGACAGGCATCCTTATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAAGAATATCACCATCGAAGGGGTGGCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR CAA 90 bp GCCACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATaGAAGCAGGAAGTTTTCATGTTGGCAGGGAGGACATTCCACCAT +
Preference number: 2 (lower is better)
Translates to: ATSQPFIPSHLEFPT*KQEVFMLAGRTFHH
Trigger: ATGGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp GACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCAAGCTTCATCTTCAGTaGGACCCACATCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: DTCWGLISHLHQVSWDYTKLHLQ*DPHHLS
Trigger: AGACAGATGATGTGGGTCTCACTGAAGATGAAGCTT...GGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp GGGAACATATCCTCCTTGATATTAACGTTTTGCAAGGCAGTGTCAACAGTGACAGCTCCACTCCGGATGTaGTCTCCAGCCACCTCCCAA +
Preference number: 2 (lower is better)
Translates to: GNISSLILTFCKAVSTVTAPLRM*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCACATCCGGAGTGGAGC...TGTCACTGTTGACACTGCCTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp CCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGTTGAGAACAAGACATACGTaGAAACACAAGGCATATGTT +
Preference number: 2 (lower is better)
Translates to: PLEVKLGPFISEPTLLRLRTRHT*KHKAYV
Trigger: AACATATGCCTTGTGTTTCCACGTATGTCTTGTTCT...CAACCTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACAGGACACTCCTTGCACTaGTTGGTTTCCTTCTCAATG +
Preference number: 2 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTGHSLH*LVSFSM
Trigger: CATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCC...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp CATCTTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGATGGTACTTGGCTCGGTaGCACTGGGAACATATCCTC +
Preference number: 2 (lower is better)
Translates to: HLHSSRSSINTRCGGCGRWYLAR*HWEHIL
Trigger: GAGGATATGTTCCCAGTGTCACCGAGCCAAGTACCA...TCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp GGTACTTGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTGCTGCCAGCTGGACACTTaGTGGGGACTGATATCACAC +
Preference number: 2 (lower is better)
Translates to: GTWLGDTGNISSLILTFCCQLDT*WGLISH
Trigger: GTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCA...GCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCGCCTCCTCCTCTCATTaGCACACCTCCTTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: TCYKAISIFASSSHWHTSASSSH*HTSFVR
Trigger: TCTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGC...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp TCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGTGCACAGAGGGCAACTCCTTGCACTGGTTaGTTTCCTTCTCAATGTAGT +
Preference number: 2 (lower is better)
Translates to: SLAGSLDLMEVMFCAQRATPCTG*FPSQCS
Trigger: ACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGT...TGCCCTCTGTGCACAGAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CCAGGTCTCATGGGATTACACCTCATCTTCACAGCAGTCGATCGTCCATTAATACAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTT +
Preference number: 2 (lower is better)
Translates to: PGLMGLHLIFTAVDRPLIQVGVS*TLLALV
Trigger: AACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTG...TATTAATGGACGATCGACTGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CATCTTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTT +
Preference number: 2 (lower is better)
Translates to: HLHSSRSSINTRCGGCGRQVGVS*TLLALV
Trigger: AACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTG...TCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAAGATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CACAGGTGCCAGCTGGACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCAAGATGTGGTGGCTGTaGAAGACTTATAAAAGAAAT +
Preference number: 2 (lower is better)
Translates to: HRCQLDTCWGLISHLHQVKMWWL*KTYKRN
Trigger: ATTTCTTTTATAAGTCTTCCACAGCCACCACATCTT...GACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp GATCCTCCCTGCAGATTTTTGGCTCTATCCACTTGTACATTATCTGTGTCTTCCGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 2 (lower is better)
Translates to: DPPCRFLALSTCTLSVSSVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...GGAAGACACAGATAATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CCA 90 bp CCAGCCACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTGAAGTTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 2 (lower is better)
Translates to: PATSQPFIPSHLEFPTLKFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAA...CTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp TCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGTGCACAGAGGGCAATTTGTGTAATCATCTaGCCCTGTCACCATTTCCTT +
Preference number: 2 (lower is better)
Translates to: SLAGSLDLMEVMFCAQRAICVII*PCHHFL
Trigger: AAGGAAATGGTGACAGGGTCAGATGATTACACAAAT...TGCCCTCTGTGCACAGAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 2 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR TCA 90 bp ATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAAATCGTCTGTTATCTTaGCCTTGGTTTGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: MIDCDDRAARKPLLSEGINRLLS*PWFVLW
Trigger: CCAGAGGACAAACCAAGGTCAAGATAACAGACGATT...TATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp ATCGCACTTGGAATTCCCAACATTGAAGCAGGAAGTTTTCATGTTGGCAGGGAGCAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: IALGIPNIEAGSFHVGREQLDTP*TGWFPS
Trigger: AGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTG...CTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp AGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTATAAAAGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: SSRSSINTRCGGCGRLIKASGPG*FYFQAH
Trigger: GTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGC...TTTTATAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp GATGGCAAGAAGACGATCCATTGTTATAGAATCCTGGGTTGCAAGGAGGACAATCAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTT +
Preference number: 2 (lower is better)
Translates to: DGKKTIHCYRILGCKEDNQVGVS*TLLALV
Trigger: AACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTG...ATTGTCCTCCTTGCAACCCAGGATTCTATAACAATGGATCGTCTTCTTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR CAA 90 bp ATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTCTATCCACTaGTACATTATCTGTGTCTTCCCTTCTTCGTCACAGGGGGTATGG +
Preference number: 2 (lower is better)
Translates to: IASVRSSLQIFGSIH*YIICVFPSSSQGVW
Trigger: CCATACCCCCTGTGACGAAGAAGGGAAGACACAGATAATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp TGCATTAGTGGCTGTGATAGAATAAATCTTCACCACATCATTGATGAATCGTCTCATGATGAGGCCGACTaGTCAGAGCCCAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: CISGCDRINLHHIIDESSHDEAD*SEPRAQ
Trigger: CTGTGCCCTGGGCTCTGAGCAGTCGGCCTCATCATG...AGACGATTCATCAATGATGTGGTGAAGATTTATTCTATCACAGCCACTAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp CACATCATTGATGAATCGTCTGTTATCTTGACCTTGGTTTGTCCTCTGGAACGCCAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HIIDESSVILTLVCPLERQLDTP*TGWFPS
Trigger: AGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTG...GCGTTCCAGAGGACAAACCAAGGTCAAGATAACAGACGATTCATCAATGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp TCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGTGCACAGAGGGCATTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTG +
Preference number: 2 (lower is better)
Translates to: SLAGSLDLMEVMFCAQRALILTF*KAVSTV
Trigger: CACTGTTGACACTGCCTTGCAAAACGTTAATATCAA...TGCCCTCTGTGCACAGAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp ACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCTCATCTTCACAGCAAACGTTGGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 2 (lower is better)
Translates to: TDITPAPGLMGLHLIFTANVGKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCCAACGTT...TGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR GCA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATTACAGCCATCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 2 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYYSHLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR GCA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTATAGAATCCTGGGTTaGAAGGAGGACAATCCTTCT +
Preference number: 2 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFYRILG*KEDNPS
Trigger: AGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATA...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp AGATCCTCCCTGCAGATTTTTGGCTCTATCCACTTGTACATTATCTGTGTCTTCCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: RSSLQIFGSIHLYIICVFHRPGG*TGRCQL
Trigger: CAGCTGACACCTACCTGTCCATCCACCAGGTCTATG...GAAGACACAGATAATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp GACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCAGTCTGAAATATTGTTaGTACAGAGAGCCATCTTTC +
Preference number: 2 (lower is better)
Translates to: DTCWGLISHLHQVSWDYTSLKYC*YREPSF
Trigger: GAAAGATGGCTCTCTGTACCAACAATATTTCAGACT...GGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTGAAGCAGGACTCCCTGCAGATTTTTaGCTCTATCCACTTGTACAT +
Preference number: 2 (lower is better)
Translates to: HLPTVHSIALGIPNIEAGLPADF*LYPLVH
Trigger: ATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAG...TCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACTCCAGTCATAGACGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYSSHRR*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACGTCTATGACTGGA...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCAAGCTTCATCTTCAGTaGGACCCACATCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: TCYKAISIFASSSHWHTSKLHLQ*DPHHLS
Trigger: AGACAGATGATGTGGGTCTCACTGAAGATGAAGCTT...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCCAGTGCTCTGGTTGGTaGCTGGTGAGGAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAQCSGW*LVRRDG
Trigger: GCCATCCCTCCTCACCAGGCACCAACCAGAGCACTG...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR GCA 90 bp GGTACTTGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTGCTGCTACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 2 (lower is better)
Translates to: GTWLGDTGNISSLILTFCCYPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTAGCA...GCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp ATGCTCCAACCAAATTTGTGTAATCATCTGACCCTGTCACCATTTCCTTTACCGCGGCCGGACATGACTTaGATTCCTTTGTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: MLQPNLCNHLTLSPFPLPRPDMT*IPLFHL
Trigger: CAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCG...CGGTAAAGGAAATGGTGACAGGGTCAGATGATTACACAAATTTGGTTGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGGCCTCCTCCTCTCATTaGCACACCTCCTTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: KELKLPSNHMACSAVHWWASSSH*HTSFVR
Trigger: TCTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGC...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp TTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTAGGACACTCCTTGCACTaGTTGGTTTCCTTCTCAATG +
Preference number: 2 (lower is better)
Translates to: FTAVDRPLIQDVVAVEDLGHSLH*LVSFSM
Trigger: CATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCC...TAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACGGAATAATAGTTGACTaGCATACAAATGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYGIIVD*HTNAPT
Trigger: GGTTGGAGCATTTGTATGCCAGTCAACTATTATTCC...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CAA 90 bp CCATCGCACTTGGAATTCCCAACATTGAAGCAGGAAGTTTTCATGTaGGCAGGGAGGACATTCCACCATTTATATTCAAACCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: PSHLEFPTLKQEVFM*AGRTFHHLYSNPSA
Trigger: AGCACTTGGGTTTGAATATAAATGGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp TGCATTAGTGGCTGTGATAGAATAAATCTTCACCACATCATTGATGAATCGTCTGCGAGCCTACACTGCTaGGGTTGCGGAAGTCATAGT +
Preference number: 2 (lower is better)
Translates to: CISGCDRINLHHIIDESSASLHC*GCGSHS
Trigger: ACTATGACTTCCGCAACCTCAGCAGTGTAGGCTCGC...AGACGATTCATCAATGATGTGGTGAAGATTTATTCTATCACAGCCACTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACCTTTACCGTAAAGTCTaGAATATTGTTGGTACAGAG +
Preference number: 2 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDLYRKV*NIVGTE
Trigger: CTCTGTACCAACAATATTTCAGACTTTACGGTAAAG...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp TCTGAAAACTGGGAGTCCTCCTTACACCTAATACATTCTTTAGCACCCTTCTCACCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: SENWESSLHLIHSLAPFSPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...TGAGAAGGGTGCTAAAGAATGTATTAGGTGTAAGGAGGACTCCCAGTTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR GCA 90 bp ATTGTTATAGAATCCTGGGTTGCAAGGAGGACAATCCTTCTTCTCTCCAGAAGGTGCTACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 2 (lower is better)
Translates to: IVIESWVARRTILLLSRRCYPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTAGCA...CCTTCTGGAGAGAAGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATCAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHQLDTP*TGWFPS
Trigger: AGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTG...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCCTGCAGTGCTCTGGTTaGTGCCTGGTGAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFALQCSG*CLVRRD
Trigger: ATCCCTCCTCACCAGGCACCAACCAGAGCACTGCAG...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATCAGAGCCTGCATGAATaGTGTATGGCCCTTGATGGA +
Preference number: 2 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHQSLHE*CMALDG
Trigger: TCCATCAAGGGCCATACACCATTCATGCAGGCTCTG...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR-3UTR CCA 90 bp GGTACTTGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTGCACTCCTTGCACTGGTTaGTTTCCTTCTCAATGTAGT +
Preference number: 2 (lower is better)
Translates to: GTWLGDTGNISSLILTFCTPCTG*FPSQCS
Trigger: ACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGT...GCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp TTCTTTAGCACCCTTCTCAGAATAGGTGTTTCTGGGACACATCTGGCAGTTAAAGGACACTCCTTGCACTaGTTGGTTTCCTTCTCAATG +
Preference number: 2 (lower is better)
Translates to: FFSTLLRIGVSGTHLAVKGHSLH*LVSFSM
Trigger: CATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCC...TTTAACTGCCAGATGTGTCCCAGAAACACCTATTCTGAGAAGGGTGCTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp ACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCTCATCTTCACAGCAGGAATAATAGTTGACTaGCATACAAATGCTCCAACC +
Preference number: 2 (lower is better)
Translates to: TDITPAPGLMGLHLIFTAGIIVD*HTNAPT
Trigger: GGTTGGAGCATTTGTATGCCAGTCAACTATTATTCC...TGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp TCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTGAAGCAGGAAGTTATTTGTGTAATCATCTaGCCCTGTCACCATTTCCTT +
Preference number: 2 (lower is better)
Translates to: SQPFIPSHLEFPTLKQEVICVII*PCHHFL
Trigger: AAGGAAATGGTGACAGGGTCAGATGATTACACAAAT...AACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCGGCAATCAGCATTTTTaGCTCCTCCTCTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGGNQHF*LLLSLA
Trigger: TGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCC...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGGGCAATCAGCATTTTTaGCTCCTCCTCTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: KELKLPSNHMACSAVHWWGNQHF*LLLSLA
Trigger: TGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCC...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp TTATATTCAAACCCAAGTGCTGGCTCTGTTCCGGCCGGACATGACTTGCATTCCAGTACAGAATATTTGTaGCTGATTTCAGCATTACAG +
Preference number: 2 (lower is better)
Translates to: LYSNPSAGSVPAGHDLHSSTEYL*LISALQ
Trigger: CTGTAATGCTGAAATCAGGCACAAATATTCTGTACT...GGAATGCAAGTCATGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAAACCTGCAGTGCTCTaGTTGGTGCCTGGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAKPAVL*LVPGEE
Trigger: CTCCTCACCAGGCACCAACCAGAGCACTGCAGGTTT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp ATCCATTGTTATAGAATCCTGGGTTGCAAGGAGGACAATCCTTCTTCTCTCCAGACTCCTTGCACTGGTTaGTTTCCTTCTCAATGTAGT +
Preference number: 2 (lower is better)
Translates to: IHCYRILGCKEDNPSSLQTPCTG*FPSQCS
Trigger: ACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGT...CTGGAGAGAAGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATAACAATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAAACTCTTGTAGAGGCTaGACAGGTCATTTCTACTTG +
Preference number: 2 (lower is better)
Translates to: LINSAMGKTISPALSFPKNSCRG*TGHFYL
Trigger: CAAGTAGAAATGACCTGTTCAGCCTCTACAAGAGTT...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000134991.8
ENSMUST00000152095.8
3UTR-3UTR TCA 90 bp TGTGATAGAATAAATCTTCACCACATCATTGATGAATCGTCTGTTATCTTGACCTTCCTTTGTTCCATCTaGAAACGTCCCCGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: CDRINLHHIIDESSVILTFLCSI*KRPRRA
Trigger: TGCCCTCCGGGGACGTTTTCAGATGGAACAAAGGAA...GGTCAAGATAACAGACGATTCATCAATGATGTGGTGAAGATTTATTCTATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGGGCAATCAGCATTTTTaGCTCCTCCTCTCATTGGCA +
Preference number: 2 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPEGNQHF*LLLSLA
Trigger: TGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCC...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCAGTAATCATATGGCATaGTCAGCAGTGCATTGGTGG +
Preference number: 2 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGSNHMA*SAVHWW
Trigger: CCACCAATGCACTGCTGAGCATGCCATATGATTACT...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp GGTACTTGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTGCTTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTG +
Preference number: 2 (lower is better)
Translates to: GTWLGDTGNISSLILTFCLILTF*KAVSTV
Trigger: CACTGTTGACACTGCCTTGCAAAACGTTAATATCAA...GCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATGCCTCCTCCTCTCATTaGCACACCTCCTTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYASSSH*HTSFVR
Trigger: TCTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGC...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp AGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTATAAAACCTTGGTTTGTCCTCTaGAACGCCCATGTAAATGTA +
Preference number: 2 (lower is better)
Translates to: SSRSSINTRCGGCGRLIKPWFVL*NAHVNV
Trigger: TACATTTACATGGGCGTTCCAGAGGACAAACCAAGG...TTTTATAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR TCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGAAGCTTCATCTTCAGTaGGACCCACATCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: HPQNQILQALKHQEKHMVKLHLQ*DPHHLS
Trigger: AGACAGATGATGTGGGTCTCACTGAAGATGAAGCTT...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR TCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGATCTCTCCTTCCTCATaGCTATGCAGGGGTTTACTA +
Preference number: 2 (lower is better)
Translates to: HPQNQILQALKHQEKHMVISPSS*LCRGLL
Trigger: TAGTAAACCCCTGCATAGTCATGAGGAAGGAGAGAT...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR GCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCGCATATGTTTATGTCTaGCTTCCAACACATATTTTG +
Preference number: 2 (lower is better)
Translates to: TCYKAISIFASSSHWHTSAYVYV*LPTHIL
Trigger: CAAAATATGTGTTGGAAGGCAGACATAAACATATGC...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR GCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCGCAGCTGATAAACTCTaGCATGGGAAAGACTATTTC +
Preference number: 2 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIAADKL*HGKDYF
Trigger: GAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR-3UTR GCA 90 bp AGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTCTATCCACTTGAGTACAGAATATTTGTaGCTGATTTCAGCATTACAG +
Preference number: 2 (lower is better)
Translates to: SLIASVRSSLQIFGSIHLSTEYL*LISALQ
Trigger: CTGTAATGCTGAAATCAGGCACAAATATTCTGTACT...CAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CCA 90 bp TTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTAAGTCTGAAATATTGTTaGTACAGAGAGCCATCTTTC +
Preference number: 2 (lower is better)
Translates to: FTAVDRPLIQDVVAVEDLSLKYC*YREPSF
Trigger: GAAAGATGGCTCTCTGTACCAACAATATTTCAGACT...TAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CCA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATTTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 2 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAA...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCTGGCATGCTCAGCAGTaGATTGGTGGGCTTAAACTT +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAWHAQQ*IGGLKL
Trigger: AAGTTTAAGCCCACCAATGCACTGCTGAGCATGCCA...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp AGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTATAAAACTTTACCGTAAAGTCTaGAATATTGTTGGTACAGAG +
Preference number: 2 (lower is better)
Translates to: SSRSSINTRCGGCGRLIKLYRKV*NIVGTE
Trigger: CTCTGTACCAACAATATTTCAGACTTTACGGTAAAG...TTTTATAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR TCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAACTGGTAATCCATCATaGGAAATGTCACAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQTGNPS*EMSQVS
Trigger: AGAAACTTGTGACATTTCTCATGATGGATTACCAGT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAAGAACAAGACATACGTaGAAACACAAGGCATATGTT +
Preference number: 2 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQRTRHT*KHKAYV
Trigger: AACATATGCCTTGTGTTTCCACGTATGTCTTGTTCT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCGTTGAGGCTTCTTCTTaGCTTTTATCACCTCCAATC +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAVEASS*LLSPPI
Trigger: GATTGGAGGTGATAAAAGCCAAGAAGAAGCCTCAAC...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAAATGTCACAAGTTTCTaGGTTGCTTTCGAACAAGAA +
Preference number: 2 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQNVTSF*VAFEQE
Trigger: TTCTTGTTCGAAAGCAACCCAGAAACTTGTGACATT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAAGCAGAGTTTTCTGTaGTTAGGGTTAAGCTGTATC +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAKQSFL*LGLSCI
Trigger: GATACAGCTTAACCCTAAGCACAGAAAACTCTGCTT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCGTAGTGACTGTTTGTTaGAATATACAACATCCTCTT +
Preference number: 2 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAVVTVC*NIQHPL
Trigger: AAGAGGATGTTGTATATTCCAACAAACAGTCACTAC...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR CCA 72 bp CCCACGAGGAAGCCAAGAAGAGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCCCACCACAGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: PTRKPRRVVTAI*PAVRRAHHSVH
Trigger: ATGGACACTGTGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAACTCTTCTTGGCTTCCTCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR GCA 72 bp GGTCCTGGGTGCTTTTACTTCCAGGCCCACACGGAATaGAAGCTTCCTTGCCATAGACCTGGTGGATGGACA +
Preference number: 3 (lower is better)
Translates to: GPGCFYFQAHTE*KLPCHRPGGWT
Trigger: TGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGCCTGGAAGTAAAAGCACCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR GCA 72 bp ACCCAAGTGCTGGCTCTGTTCCGGCCGGACATGACTTaGATTCCTTTGTTCCATCTGAAAACGTCCCCGGAG +
Preference number: 3 (lower is better)
Translates to: TQVLALFRPDMT*IPLFHLKTSPE
Trigger: CTCCGGGGACGTTTTCAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACAGAGCCAGCACTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp GTGCAGGGTGGGCGATCCACACACTCACTGGCTCCTTCCTCTGAAAACTGGGAGTTTACTAGCACGGGCTaGACTGCCTTAGAACCCATA +
Preference number: 3 (lower is better)
Translates to: VQGGRSTHSLAPSSENWEFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAA...CTCCCAGTTTTCAGAGGAAGGAGCCAGTGAGTGTGTGGATCGCCCACCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR GCA 72 bp GGTGGATGGACAGGTAGGTGTCAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCTCAATGTAGTGGCCTG +
Preference number: 3 (lower is better)
Translates to: GGWTGRCQLDTP*TGWFPSQCSGL
Trigger: CAGGCCACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR GCA 72 bp AGAAGGTACAACCATCACAGGTGCCAGCTGGACACTTaGTGGGGACTGATATCACACCTGCACCAGGTCTCA +
Preference number: 3 (lower is better)
Translates to: RRYNHHRCQLDT*WGLISHLHQVS
Trigger: TGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTGATGGTTGTACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 72 bp ACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTGGACACTCCTTGCACT +
Preference number: 3 (lower is better)
Translates to: TECKLPCHRPGG*TGRCQLDTPCT
Trigger: AGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CCAGAAGGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTCAGCTGGACACTCCTaGCACTGGTTGGTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: PEGGSLIASVRSSLQIFGSAGHS*HWLVSF
Trigger: GAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGA...GCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR GCA 72 bp TTTTACTTCCAGGCCCACACGGAATGCAAGCTTCCTTaGCATAGACCTGGTGGATGGACAGGTAGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: FYFQAHTECKLP*HRPGGWTGRCQ
Trigger: CTGACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGCCTGGAAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 72 bp TGCTGGGGACTGATATCACACCTGCACCAGGTCTCATaGGATTACACCTCATCTTCACAGCAGTCGATCGTC +
Preference number: 3 (lower is better)
Translates to: CWGLISHLHQVS*DYTSSSQQSIV
Trigger: GACGATCGACTGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGCCTCCTCCTCTCATaGGCACACCTCCTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFCLLLS*AHLLCE
Trigger: CTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGCA...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp GTGTATGCCACCCCTTCGATGGTGATATTCTTTACTAGCACGGGCTTGACTGCCAAGTATTTCGTTCCCTaGGAGGTGAAGCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: VYATPSMVIFFTSTGLTAKYFVP*EVKLGP
Trigger: TGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT...GGCAGTCAAGCCCGTGCTAGTAAAGAATATCACCATCGAAGGGGTGGCATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACAATGCTCAGCAGTGCATaGGTGGGCTTAAACTTGGGT +
Preference number: 3 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTMLSSA*VGLNLG
Trigger: ACCCAAGTTTAAGCCCACCAATGCACTGCTGAGCAT...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp GAACCTGTGGCTCCAGTCATAGACGTTGGTGGTTTAAATCCTGGGATGTGCAAGAAGTATTTCGTTCCCTaGGAGGTGAAGCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: EPVAPVIDVGGLNPGMCKKYFVP*EVKLGP
Trigger: TGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT...CTTGCACATCCCAGGATTTAAACCACCAACGTCTATGACTGGAGCCACAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACAAGTATTTCGTTCCCTaGGAGGTGAAGCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYKYFVP*EVKLGP
Trigger: TGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CACAGGTGCCAGCTGGACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCGGGAACATATCCTCCTaGATATTAACGTTTTGCAAG +
Preference number: 3 (lower is better)
Translates to: HRCQLDTCWGLISHLHQVGNISS*ILTFCK
Trigger: CTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC...GACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TCTGCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAAATGAGCCTGGTTTGTaGCTGAAAGTGCCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: SARMIDCDDRAARKPLLSNEPGL*LKVPGL
Trigger: TAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATT...TGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 72 bp GCATTACAGAATGGGAGCCCCATTCTCCATTGTCTGTaGGCTTCACCCACTTGTCTGTGGTGGCATCCATCT +
Preference number: 3 (lower is better)
Translates to: ALQNGSPILHCL*ASPTCLWWHPS
Trigger: AGATGGATGCCACCACAGACAAGTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTCCCATTCTGTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR GCA 72 bp AAAAGCAGTCGCTATAGCAAAGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCACACGGAATGCAAGCTT +
Preference number: 3 (lower is better)
Translates to: KSSRYSKASGPG*FYFQAHTECKL
Trigger: AAGCTTGCATTCCGTGTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTTGCTATAGCGACTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp AGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTCTATCCACTTGGTGAGCTTCACCCACTaGTCTGTGGTGGCATCCATC +
Preference number: 3 (lower is better)
Translates to: SLIASVRSSLQIFGSIHLVSFTH*SVVASI
Trigger: GATGGATGCCACCACAGACAAGTGGGTGAAGCTCAC...CAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CAA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAACCTGCAGTGCTCTGGTaGGTGCCTGGTGAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQPAVLW*VPGEEG
Trigger: TCCCTCCTCACCAGGCACCAACCAGAGCACTGCAGG...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR-3UTR CAA 90 bp TCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCTGTGCACAGAGGGCAATGCTCCAACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 3 (lower is better)
Translates to: SLAGSLDLMEVMFCAQRAMLQPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTTGGAGCAT...TGCCCTCTGTGCACAGAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp ATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATATTTACTAGCACGGGCTaGACTGCCTTAGAACCCATA +
Preference number: 3 (lower is better)
Translates to: MIDCDDRAARKPLLSEGIFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAA...TATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 72 bp CTGTGCTTAGGGTTAAGCTGTATCTCTCCTTCCTCATaGCTATGCAGGGGTTTACTAAACAAGGTGCTCCGC +
Preference number: 3 (lower is better)
Translates to: LCLGLSCISPSS*LCRGLLNKVLR
Trigger: GCGGAGCACCTTGTTTAGTAAACCCCTGCATAGTCATGAGGAAGGAGAGATACAGCTTAACCCTAAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR TCA 72 bp AAAATCCTGCCGGCAATTCATCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGTAGGTGCCTTCCACAC +
Preference number: 3 (lower is better)
Translates to: KILPAIHPIHQI*CHCPRSRCLPH
Trigger: GTGTGGAAGGCACCTACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGATGAATTGCCGGCAGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR TCA 72 bp GTTGCTGAAAGTGCCTGGCTTACATGGAAAGCACTCTaGGGTGTATGCCACCCCTTCGATGGTGATATTCTT +
Preference number: 3 (lower is better)
Translates to: VAESAWLTWKAL*GVCHPFDGDIL
Trigger: AAGAATATCACCATCGAAGGGGTGGCATACACCTCAGAGTGCTTTCCATGTAAGCCAGGCACTTTCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp ATTGTTATAGAATCCTGGGTTGCAAGGAGGACAATCCTTCTTCTCTCCAGAAGGTCAGCTGGACACTCCTaGCACTGGTTGGTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: IVIESWVARRTILLLSRRSAGHS*HWLVSF
Trigger: GAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGA...CCTTCTGGAGAGAAGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp TCTGCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGGGAACATATCCTCCTaGATATTAACGTTTTGCAAG +
Preference number: 3 (lower is better)
Translates to: SARMIDCDDRAARKPLLSGNISS*ILTFCK
Trigger: CTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC...TGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CCAGCCACCTCCCAACCGTTCATTCCATCGCACTTGGAATTCCCAACATTGAAGTCAAAGAAGATGTTGTaGTCCACGTACTGGTACTCA +
Preference number: 3 (lower is better)
Translates to: PATSQPFIPSHLEFPTLKSKKML*STYWYS
Trigger: TGAGTACCAGTACGTGGACAACAACATCTTCTTTGA...CTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CAA 90 bp GGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTCTATCAACTCAAAGAAGATGTaGTTGTCCACGTACTGGTAC +
Preference number: 3 (lower is better)
Translates to: GGSLIASVRSSLQIFGSINSKKM*LSTYWY
Trigger: GTACCAGTACGTGGACAACAACATCTTCTTTGAGTT...GATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CAA 90 bp ATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAGACATGCGTATAAGCTaGCTTTTCTTTGGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: MIDCDDRAARKPLLSEGIDMRIS*LFFGSS
Trigger: GGAGGAACCAAAGAAAAGCAAGCTTATACGCATGTC...TATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATTGCCTCCTCCTCTCATaGGCACACCTCCTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHCLLLS*AHLLCE
Trigger: CTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGCA...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACATATATTGGGGCATCTaGAGGATTTCAGCTGAACAG +
Preference number: 3 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDIYWGI*RISAEQ
Trigger: CTGTTCAGCTGAAATCCTCAAGATGCCCCAATATAT...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR CCA 72 bp TATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTaGCACACCTCCTTTGTGAGATCACAGCCATGTCAG +
Preference number: 3 (lower is better)
Translates to: YKAISIFASSSH*HTSFVRSQPCQ
Trigger: CTGACATGGCTGTGATCTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR CCA 72 bp GGGATGGCAAGAAGACGATCCATTGTTATAGAATCCTaGGTTGCAAGGAGGACAATCCTTCTTCTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: GMARRRSIVIES*VARRTILLLSR
Trigger: TCTGGAGAGAAGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATAACAATGGATCGTCTTCTTGCCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATGCCTCCTCCTCTCATaGGCACACCTCCTTTGTGAG +
Preference number: 3 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQCLLLS*AHLLCE
Trigger: CTCACAAAGGAGGTGTGCCAATGAGAGGAGGAGGCA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR CCA 72 bp CTCCCCTCATGTCCACATAAACTGATATTGAAGAAATaGAAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LPSCPHKLILKK*KYFVPLEVKLG
Trigger: CCCCAGCTTCACCTCCAAGGGAACGAAATACTTCCATTTCTTCAATATCAGTTTATGTGGACATGAGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 72 bp GATGAATCGTCTGTTCTAGAAAGAGAGCAGAAAGAGTaGCATATCTTGACCTTGGTTTGTCCTCTGGAACGC +
Preference number: 3 (lower is better)
Translates to: DESSVLEREQKE*HILTLVCPLER
Trigger: GCGTTCCAGAGGACAAACCAAGGTCAAGATATGCCACTCTTTCTGCTCTCTTTCTAGAACAGACGATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR-3UTR CAA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATAGGCAATCAGCATTTTaGCCTCCTCCTCTCATTGGC +
Preference number: 3 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHRQSAF*PPPLIG
Trigger: GCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCT...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCAAGTCTGAAATATTGTaGGTACAGAGAGCCATCTTT +
Preference number: 3 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFKSEIL*VQRAIF
Trigger: AAAGATGGCTCTCTGTACCAACAATATTTCAGACTT...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp GAACCTGTGGCTCCAGTCATAGACGTTGGTGGTTTAAATCCTGGGATGTGCAAGAAGTCTGAAATATTGTaGGTACAGAGAGCCATCTTT +
Preference number: 3 (lower is better)
Translates to: EPVAPVIDVGGLNPGMCKKSEIL*VQRAIF
Trigger: AAAGATGGCTCTCTGTACCAACAATATTTCAGACTT...CTTGCACATCCCAGGATTTAAACCACCAACGTCTATGACTGGAGCCACAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp GGGAACATATCCTCCTTGATATTAACGTTTTGCAAGGCAGTGTCAACAGTGACATCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: GNISSLILTFCKAVSTVTSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...TGTCACTGTTGACACTGCCTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
3UTR GCA 72 bp CATTCCATACATATAATATTTCCTGAAGCCCTCTCTTaGAGGCTCCCTCGATCTCATGGAAGTCATGTTCTG +
Preference number: 3 (lower is better)
Translates to: HSIHIIFPEALS*RLPRSHGSHVL
Trigger: CAGAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGTATGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CCA 72 bp CCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTaGCTCTATCCACTTGTACATTATCTGTGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PNSICEILPADF*LYPLVHYLCLP
Trigger: GGGAAGACACAGATAATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 72 bp TGCTACAGCATTGTCTCTTCATATATTGGGGCATCTTaGGGATTTCAGCTGAACAGACTCAAAGTGGTCATC +
Preference number: 3 (lower is better)
Translates to: CYSIVSSYIGAS*GFQLNRLKVVI
Trigger: GATGACCACTTTGAGTCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATATGAAGAGACAATGCTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATTCAGCTGGACACTCCTaGCACTGGTTGGTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYSAGHS*HWLVSF
Trigger: GAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGA...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CCAGGTCTCATGGGATTACACCTCATCTTCACAGCAGTCGATCGTCCATTAATAAAGTCTGAAATATTGTaGGTACAGAGAGCCATCTTT +
Preference number: 3 (lower is better)
Translates to: PGLMGLHLIFTAVDRPLIKSEIL*VQRAIF
Trigger: AAAGATGGCTCTCTGTACCAACAATATTTCAGACTT...TATTAATGGACGATCGACTGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR TCA 72 bp TCTGTCCAGTCTGTACTTTGCACCAGTTCCTCTGAGTaGTATTTCAAGTGTATTTCCACTCTCCTGGTTAAA +
Preference number: 3 (lower is better)
Translates to: SVQSVLCTSSSE*YFKCISTLLVK
Trigger: TTTAACCAGGAGAGTGGAAATACACTTGAAATATCACTCAGAGGAACTGGTGCAAAGTACAGACTGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115348.9
3UTR-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAGGCAATCAGCATTTTaGCCTCCTCCTCTCATTGGC +
Preference number: 3 (lower is better)
Translates to: FCSLTKYVTCYKAISIFARQSAF*PPPLIG
Trigger: GCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCATGCTCAGCAGTGCATaGGTGGGCTTAAACTTGGGT +
Preference number: 3 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAMLSSA*VGLNLG
Trigger: ACCCAAGTTTAAGCCCACCAATGCACTGCTGAGCAT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATGACATGCGTATAAGCTaGCTTTTCTTTGGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYDMRIS*LFFGSS
Trigger: GGAGGAACCAAAGAAAAGCAAGCTTATACGCATGTC...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR TCA 72 bp TCTCTTCATATATTGGGGCATCTTGAGGATTTCAGCTaGACAGACTCAAAGTGGTCATCTTTTTCCTTTGTG +
Preference number: 3 (lower is better)
Translates to: SLHILGHLEDFS*TDSKWSSFSFV
Trigger: CACAAAGGAAAAAGATGACCACTTTGAGTCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATATGAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR GCA 72 bp GACACTGGGAACATATCCTCCTTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTGACACCTAAAAACATA +
Preference number: 3 (lower is better)
Translates to: DTGNISSLILTF*KAVSTVTPKNI
Trigger: TATGTTTTTAGGTGTCACTGTTGACACTGCCTTGCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR GCA 72 bp GTTTGTCCTCTGGAACGCCCATGTAAATGTAAACGTTaGATTCTTGAATATGACATGCGTATAAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: VCPLERPCKCKR*ILEYDMRISLL
Trigger: AAGCAAGCTTATACGCATGTCATATTCAAGAATGCAACGTTTACATTTACATGGGCGTTCCAGAGGACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTCTGTCTTCTGTAGTTaGACAAAGTATGTGACATGT +
Preference number: 3 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGSVFCS*TKYVTC
Trigger: ACATGTCACATACTTTGTCAAACTACAGAAGACAGA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR TCA 72 bp TCTGATAATGCCAGATTGTCTAAATTAATGGAATGTTaGGGCTTCTTCTTGGCTTTTATCACCTCCAATCCC +
Preference number: 3 (lower is better)
Translates to: SDNARLSKLMEC*GFFLAFITSNP
Trigger: GGGATTGGAGGTGATAAAAGCCAAGAAGAAGCCTCAACATTCCATTAATTTAGACAATCTGGCATTATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR TCA 72 bp CTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTaGCACTGGGAACATATCCTCCTTGATATTAACGTT +
Preference number: 3 (lower is better)
Translates to: LIKEMNIWYLAR*HWEHILLDINV
Trigger: AACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTGTCTTCTGTAGTTaGACAAAGTATGTGACATGT +
Preference number: 3 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKSVFCS*TKYVTC
Trigger: ACATGTCACATACTTTGTCAAACTACAGAAGACAGA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCTCTGTCTTCTGTAGTTaGACAAAGTATGTGACATGT +
Preference number: 3 (lower is better)
Translates to: FCSLTKYVTCYKAISIFASVFCS*TKYVTC
Trigger: ACATGTCACATACTTTGTCAAACTACAGAAGACAGA...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
3UTR-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAAATGCTTTAAGCCTTaGACTTCTGATAATGCCAGA +
Preference number: 3 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAKCFKP*TSDNAR
Trigger: TCTGGCATTATCAGAAGTCAAAGGCTTAAAGCATTT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
3UTR GCA 72 bp AGACATACGTGGAAACACAAGGCATATGTTTATGTCTaGCTTCCAACACATATTTTGTATGTAGACAGTATA +
Preference number: 3 (lower is better)
Translates to: RHTWKHKAYVYV*LPTHILYVDSI
Trigger: TATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp TTCTTCTCTCCAGAAGGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: FFSPEGGSLIASVRSSLQVSSPN*LAACER
Trigger: GCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGAC...CTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCCTTCTGGAGAGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDPAQTA*QPASAQ
Trigger: CTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGG...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134991.8
ENSMUST00000152095.8
CDS-3UTR CCA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTPAQTA*QPASAQ
Trigger: CTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGG...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGTTGCGGTTCTTTGCCTTTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LEVKLGPFISEPTLLRLRFFAFH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAAAGGCAAAGAA...CCGCAACCTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSVSSPN*LAACER
Trigger: GCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGAC...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134991.8
ENSMUST00000152095.8
CDS-3UTR GCA 90 bp CATGGTAGAAAAAGCAGTCGCTATAGCAAAGCGAGTGGTCCTGGGTGCTTTTACGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: HGRKSSRYSKASGPGCFYVSSPN*LAACER
Trigger: GCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGAC...GTAAAAGCACCCAGGACCACTCGCTTTGCTATAGCGACTGCTTTTTCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp ACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCCTGCAGAATTCGGAATaGCGACCCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRNASFLAIDLVDGQVGVLQNSE*RPSTWS
Trigger: GCTCCAGGTGGAGGGTCGCCATTCCGAATTCTGCAG...GACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
3UTR CAA 72 bp GAGCCCCATTCTCCATTGTCTGTGAGCTTCACCCACTaGTCTGTGGTGGCATCCATCTCCTGGCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: EPHSPLSVSFTH*SVVASISWHWS
Trigger: TGACCAGTGCCAGGAGATGGATGCCACCACAGACAAGTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
CDS-3UTR CCA 90 bp CACATCATTGATGAATCGTCTGTTATCTTGACCTTGGTTTGTCCTCTGGAACGCCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: HIIDESSVILTLVCPLERPAQTA*QPASAQ
Trigger: CTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGG...GCGTTCCAGAGGACAAACCAAGGTCAAGATAACAGACGATTCATCAATGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGACCCACTTGTCTGTGGTaGCATCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGPTCLW*HPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGG...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp GCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAATCACCCACTTGTCTGTaGTGGCATCCATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ARMIDCDDRAARKPLLSESPTCL*WHPSPG
Trigger: GCCAGGAGATGGATGCCACCACAGACAAGTGGGTGA...TTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTCAAACCCAAGTGCTaGCTCTGTTCCGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGFKPKC*LCSGRT
Trigger: TGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAA...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCTTCAAACCCAAGTGCTaGCTCTGTTCCGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: TRNASFLAIDLVDGQVGVFKPKC*LCSGRT
Trigger: TGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAA...GACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR CAA 72 bp AACCCAAGTGCTGGCTCTGTTCCGGCCGGACATGACTaGCATTCCTTTGTTCCATCTGAAAACGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: NPSAGSVPAGHD*HSFVPSENVPG
Trigger: TCCGGGGACGTTTTCAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACAGAGCCAGCACTTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp GATGGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCACTGGCTCCTTCCTCTaGAAACTGGGAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DGQVGVSWTLLALVGFLLTGSFL*KLGVLL
Trigger: AAGGAGGACTCCCAGTTTTCAGAGGAAGGAGCCAGT...GAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCTCATCTTCACAGCAGCTCCACTCCGGATGTaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TDITPAPGLMGLHLIFTAAPLRM*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCACATCCGGAGTGGAGC...TGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTCGTTCCCTTGGAGGTaGAGCTGGGGCCATTCATCA +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDSFPWR*SWGHSS
Trigger: TGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGA...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATACAACCATCACAGGTaGCAGCTGGACACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGYNHHR*QLDTCW
Trigger: CCAGCAAGTGTCCAGCTGGCACCTGTGATGGTTGTA...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CCAGAAGGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCTTCTTTGCCTTTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PEGGSLIASVRSSLQIFGFFAFH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAAAGGCAAAGAA...GCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACAGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACAGGTGCCAGCTGGACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCTTTCTGGGACACATCTaGCAGTTAAATGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HRCQLDTCWGLISHLHQVFLGHI*QLNEPG
Trigger: ACCAGGCTCATTTAACTGCCAGATGTGTCCCAGAAA...GACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp GTGCCTGGCTTACATGGAAAGCACTCTGAGGTGTATGCCACCCCTTCGATGGTGCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: VPGLHGKHSEVYATPSMVPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...CACCATCGAAGGGGTGGCATACACCTCAGAGTGCTTTCCATGTAAGCCAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp GCCCACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGCATCTGGCAGTTAAATaGGCCTGGTTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: AHTECKLPCHRPGGWTGRHLAVK*AWFVAE
Trigger: TTCAGCAACAAACCAGGCTCATTTAACTGCCAGATG...CCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATACTGGCTCCTTCCTCTaGAAACTGGGAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDTGSFL*KLGVLL
Trigger: AAGGAGGACTCCCAGTTTTCAGAGGAAGGAGCCAGT...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCGCTCCACTCCGGATGTaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSAPLRM*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCACATCCGGAGTGGAGC...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCTTTGGTTCCTCCCCATaGTTCCACCACATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRNASFLAIDLVDGQVGVFGSSP*FHHIGA
Trigger: AGCACCAATGTGGTGGAATCATGGGGAGGAACCAAA...GACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CACAGGTGCCAGCTGGACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCTCCACCTGGAGCCAGTaGTATCACATTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: HRCQLDTCWGLISHLHQVSTWSQ*YHILYI
Trigger: AATATACAGAATGTGATAGCACTGGCTCCAGGTGGA...GACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp GTGCAGGGTGGGCGATCCACACACTCACTGGCTCCTTCCTCTGAAAACTGGGAGAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: VQGGRSTHSLAPSSENWESVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...CTCCCAGTTTTCAGAGGAAGGAGCCAGTGAGTGTGTGGATCGCCCACCCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR GCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGACGGCCGGACATGACTTaGATTCCTTTGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGRPDMT*IPLFHL
Trigger: CAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCG...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHPAQTA*QPASAQ
Trigger: CTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGG...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACCCCACTTGTCTGTGGTaGCATCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDPTCLW*HPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGG...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCTACAGCCATCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSYSHLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVPAQTA*QPASAQ
Trigger: CTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR CCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp GATGGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCGATCCACACACTCACTaGCTCCTTCCTCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: DGQVGVSWTLLALVGFLLDPHTH*LLPLKT
Trigger: AGTTTTCAGAGGAAGGAGCCAGTGAGTGTGTGGATC...GAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATCAAAACACAGTCAGCTaGGCAGAGAGTCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDQNTVS*AESLKH
Trigger: GTGTTTGAGACTCTCTGCTCAGCTGACTGTGTTTTG...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPEVSSPN*LAACER
Trigger: GCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGAC...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CCAGAAGGGGGCAGCCTAATAGCATCTGTGAGATCCTCCCTGCAGATTTTTGGCAACGTTGGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: PEGGSLIASVRSSLQIFGNVGKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCCAACGTT...GCCAAAAATCTGCAGGGAGGATCTCACAGATGCTATTAGGCTGCCCCCTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR GCA 90 bp GACACTTGCTGGGGACTGATATCACACCTGCACCAGGTCTCATGGGATTACACCAACGTTGGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: DTCWGLISHLHQVSWDYTNVGKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCCAACGTT...GGTGTAATCCCATGAGACCTGGTGCAGGTGTGATATCAGTCCCCAGCAAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp GTTCATTCCATACATATAATATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATACAGCCATCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VHSIHIIFPEALSCRLPRYSHLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA...TCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGTATGGAATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTTCTGGGACACATCTaGCAGTTAAATGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGFLGHI*QLNEPG
Trigger: ACCAGGCTCATTTAACTGCCAGATGTGTCCCAGAAA...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATGGACACTCCTTGCACTaGTTGGTTTCCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDGHSLH*LVSFSM
Trigger: CATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCC...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR CAA 72 bp GATTTCAGCATTACAGAATGGGAGCCCCATTCTCCATaGTCTGTGAGCTTCACCCACTTGTCTGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DFSITEWEPHSP*SVSFTHLSVVA
Trigger: TGCCACCACAGACAAGTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
CDS-3UTR TCA 90 bp GGTACTTGGCTCGGTGACACTGGGAACATATCCTCCTTGATATTAACGTTTTGCTTCCTTTGTTCCATCTaGAAACGTCCCCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTWLGDTGNISSLILTFCFLCSI*KRPRRA
Trigger: TGCCCTCCGGGGACGTTTTCAGATGGAACAAAGGAA...GCAAAACGTTAATATCAAGGAGGATATGTTCCCAGTGTCACCGAGCCAAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCTGTTCCGGCCGGACATaGCTTGCATTCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSCSGRT*LAFLCS
Trigger: GGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACA...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCCAAAACACAGTCAGCTaGGCAGAGAGTCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFQNTVS*AESLKH
Trigger: GTGTTTGAGACTCTCTGCTCAGCTGACTGTGTTTTG...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGAACATATAATATTTCCTaGAGCCCTCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGTYNIS*SPLLQA
Trigger: AGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGT...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATCATGATGAGGCCGACTaGTCAGAGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHHDEAD*SEPRAQ
Trigger: CTGTGCCCTGGGCTCTGAGCAGTCGGCCTCATCATG...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCCAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSQLDTP*TGWFPS
Trigger: AGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTG...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGAAAGCTTGCTTTTCTTTaGTTCCTCCCCATGATTCCA +
Preference number: 4 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGKLAFL*FLPMIP
Trigger: TGGAATCATGGGGAGGAACCAAAGAAAAGCAAGCTT...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSHRPGG*TGRCQL
Trigger: CAGCTGACACCTACCTGTCCATCCACCAGGTCTATG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCAAAGCGAGTGGTCCTaGGTGCTTTTACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSQSEWS*VLLLPG
Trigger: GCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTTG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
3UTR CAA 72 bp CTGGGACACATCTGGCAGTTAAATGAGCCTGGTTTGTaGCTGAAAGTGCCTGGCTTACATGGAAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: LGHIWQLNEPGL*LKVPGLHGKHS
Trigger: AGAGTGCTTTCCATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATTTAACTGCCAGATGTGTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR CAA 72 bp TCTCCAGCCACCTCCCAACCGTTCATTCCATCGCACTaGGAATTCCCAACATTGAAGCAGGAAGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SPATSQPFIPSH*EFPTLKQEVFM
Trigger: CATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTGGGAGGTGGCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp GCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAATGGCACTGGTCATTCTaGATAAAGAACTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARMIDCDDRAARKPLLSEWHWSF*IKNSKK
Trigger: CTTCTTTGAGTTCTTTATTCAGAATGACCAGTGCCA...TTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATGCTCCACTCCGGATGTaGTCTCCAGCCACCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDAPLRM*SPATSQ
Trigger: TTGGGAGGTGGCTGGAGATCACATCCGGAGTGGAGC...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAGCGAGCCTACACTGCTaGGGTTGCGGAAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: LINSAMGKTISPALSFPKASLHC*GCGSHS
Trigger: ACTATGACTTCCGCAACCTCAGCAGTGTAGGCTCGC...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYVSSPN*LAACER
Trigger: GCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGAC...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTCCACCTGGAGCCAGTaGTATCACATTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDSTWSQ*YHILYI
Trigger: AATATACAGAATGTGATAGCACTGGCTCCAGGTGGA...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDSVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTACAGCCATCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGYSHLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGTACAGCCATCTGGCCTaGTGTCAGAAGGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMYSHLA*CQKGPP
Trigger: TGGTGGGCCCTTCTGACAGCAGGCCAGATGGCTGTA...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTATAGAATCCTGGGTTaGAAGGAGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDYRILG*KEDNPS
Trigger: AGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATA...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHASGPG*FYFQAH
Trigger: GTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGC...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGGCGAGTGGTCCTGGGTaGTTTTACTTCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMASGPG*FYFQAH
Trigger: GTGGGCCTGGAAGTAAAAGCACCCAGGACCACTCGC...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp TTCTTTAGCACCCTTCTCAGAATAGGTGTTTCTGGGACACATCTGGCAGTTAAAGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FFSTLLRIGVSGTHLAVKVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...TTTAACTGCCAGATGTGTCCCAGAAACACCTATTCTGAGAAGGGTGCTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp CATGGTAGAAAAAGCAGTCGCTATAGCAAAGCGAGTGGTCCTGGGTGCTTTTACAGGAAGTTTTCATGTTaGCAGGGAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: HGRKSSRYSKASGPGCFYRKFSC*QGGHST
Trigger: GGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCT...GTAAAAGCACCCAGGACCACTCGCTTTGCTATAGCGACTGCTTTTTCTACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp GTTCATTCCATACATATAATATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGAAGCCTGGTTTGTTGCTaGAAGTGCCTGGCTTACATG +
Preference number: 4 (lower is better)
Translates to: VHSIHIIFPEALSCRLPRSLVCC*KCLAYM
Trigger: CATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCT...TCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGTATGGAATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCAACGTTGGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSNVGKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCCAACGTT...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYSVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp GTTCATTCCATACATATAATATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGACGGCCGGACATGACTTaGATTCCTTTGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: VHSIHIIFPEALSCRLPRRPDMT*IPLFHL
Trigger: CAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCG...TCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGTATGGAATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAACTGCAGAATTCGGAATaGCGACCCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQLQNSE*RPSTWS
Trigger: GCTCCAGGTGGAGGGTCGCCATTCCGAATTCTGCAG...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR CCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGCTGCAGAATTCGGAATaGCGACCCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPELQNSE*RPSTWS
Trigger: GCTCCAGGTGGAGGGTCGCCATTCCGAATTCTGCAG...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCTGCAGAATTCGGAATaGCGACCCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDLQNSE*RPSTWS
Trigger: GCTCCAGGTGGAGGGTCGCCATTCCGAATTCTGCAG...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAATTCTTTGCCTTTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LINSAMGKTISPALSFPKFFAFH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAAAGGCAAAGAA...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATTCACCCACTTGTCTGTaGTGGCATCCATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHSPTCL*WHPSPG
Trigger: GCCAGGAGATGGATGCCACCACAGACAAGTGGGTGA...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp AGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTATAAAATCACCCACTTGTCTGTaGTGGCATCCATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSRSSINTRCGGCGRLIKSPTCL*WHPSPG
Trigger: GCCAGGAGATGGATGCCACCACAGACAAGTGGGTGA...TTTTATAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTTCAAACCCAAGTGCTaGCTCTGTTCCGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGFKPKC*LCSGRT
Trigger: TGTCCGGCCGGAACAGAGCCAGCACTTGGGTTTGAA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
3UTR CAA 72 bp TTTCTGGGACACATCTGGCAGTTAAATGAGCCTGGTTaGTTGCTGAAAGTGCCTGGCTTACATGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: FLGHIWQLNEPG*LLKVPGLHGKH
Trigger: GTGCTTTCCATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATTTAACTGCCAGATGTGTCCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
3UTR CAA 72 bp CAACCGTTCATTCCATCGCACTTGGAATTCCCAACATaGAAGCAGGAAGTTTTCATGTTGGCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: QPFIPSHLEFPT*KQEVFMLAGRT
Trigger: TGTCCTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAACGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATTTCCTTTGTTCCATCTaGAAACGTCCCCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHFLCSI*KRPRRA
Trigger: TGCCCTCCGGGGACGTTTTCAGATGGAACAAAGGAA...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCTTCCTTTGTTCCATCTaGAAACGTCCCCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIFLCSI*KRPRRA
Trigger: TGCCCTCCGGGGACGTTTTCAGATGGAACAAAGGAA...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTGTTCCGGCCGGACATaGCTTGCATTCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGCSGRT*LAFLCS
Trigger: GGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGGCGAGCCTACACTGCTaGGGTTGCGGAAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVASLHC*GCGSHS
Trigger: ACTATGACTTCCGCAACCTCAGCAGTGTAGGCTCGC...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATCGTTCCCTTGGAGGTaGAGCTGGGGCCATTCATCA +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQSFPWR*SWGHSS
Trigger: TGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATCTTTACCGTAAAGTCTaGAATATTGTTGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDLYRKV*NIVGTE
Trigger: CTCTGTACCAACAATATTTCAGACTTTACGGTAAAG...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTGGTACTTGGCTCGGTaGCACTGGGAACATATCCTC +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGWYLAR*HWEHIL
Trigger: GAGGATATGTTCCCAGTGTCACCGAGCCAAGTACCA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATTGGTACTTGGCTCGGTaGCACTGGGAACATATCCTC +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHWYLAR*HWEHIL
Trigger: GAGGATATGTTCCCAGTGTCACCGAGCCAAGTACCA...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCCATGATGAGGCCGACTaGTCAGAGCCCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAHDEAD*SEPRAQ
Trigger: CTGTGCCCTGGGCTCTGAGCAGTCGGCCTCATCATG...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDLILTF*KAVSTV
Trigger: CACTGTTGACACTGCCTTGCAAAACGTTAATATCAA...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCTGCCAGCTGGACACTTaGTGGGGACTGATATCACAC +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMICQLDT*WGLISH
Trigger: GTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCA...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGGATAGCACAGCTGTCTaGAGCTGGGAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMDSTAV*SWEFTL
Trigger: GAGTGTGAACTCCCAGCTGCAGACAGCTGTGCTATC...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp TTTTTGACATGTCACAGATTTCAGTCCAGTGACAAGAGAAAGAAGTACCTGGGATTCTTTGCCTTTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLTCHRFQSSDKRKKYLGFFAFH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAAAGGCAAAGAA...TCCCAGGTACTTCTTTCTCTTGTCACTGGACTGAAATCTGTGACATGTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115348.9
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGGTTGTTACAGCCATCTaGCCTGCTGTCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVVVTAI*PAVRRA
Trigger: GGCCCTTCTGACAGCAGGCCAGATGGCTGTAACAAC...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR CCA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATCCCACTTGTCTGTGGTaGCATCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYPTCLW*HPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGG...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGTCACCCACTTGTCTGTaGTGGCATCCATCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVSPTCL*WHPSPG
Trigger: GCCAGGAGATGGATGCCACCACAGACAAGTGGGTGA...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp CCAGGTCTCATGGGATTACACCTCATCTTCACAGCAGTCGATCGTCCATTAATATTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PGLMGLHLIFTAVDRPLIFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAA...TATTAATGGACGATCGACTGCTGTGAAGATGAGGTGTAATCCCATGAGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTCCAGTCATAGACGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSSSHRR*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACGTCTATGACTGGA...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CATGGTAGAAAAAGCAGTCGCTATAGCAAAGCGAGTGGTCCTGGGTGCTTTTACAAGCTTGCTTTTCTTTaGTTCCTCCCCATGATTCCA +
Preference number: 4 (lower is better)
Translates to: HGRKSSRYSKASGPGCFYKLAFL*FLPMIP
Trigger: TGGAATCATGGGGAGGAACCAAAGAAAAGCAAGCTT...GTAAAAGCACCCAGGACCACTCGCTTTGCTATAGCGACTGCTTTTTCTACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATCAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHQVGVS*TLLALV
Trigger: AACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTG...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCAGGTAGGTGTCAGCTaGACACTCCTTGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIQVGVS*TLLALV
Trigger: AACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTG...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATCATAGACCTGGTGGATaGACAGGTAGGTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHHRPGG*TGRCQL
Trigger: CAGCTGACACCTACCTGTCCATCCACCAGGTCTATG...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATCAAAGCGAGTGGTCCTaGGTGCTTTTACTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHQSEWS*VLLLPG
Trigger: GCCTGGAAGTAAAAGCACCCAGGACCACTCGCTTTG...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATAGTCTGAAATATTGTTaGTACAGAGAGCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDSLKYC*YREPSF
Trigger: GAAAGATGGCTCTCTGTACCAACAATATTTCAGACT...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATCAGCTGGACACTTGCTaGGGACTGATATCACACCTG +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHQLDTC*GLISHL
Trigger: CAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTG...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR CAA 72 bp GGACAAGTCCTAATGGGGGTCCTGAATGCTACAGCATaGTCTCTTCATATATTGGGGCATCTTGAGGATTTC +
Preference number: 4 (lower is better)
Translates to: GQVLMGVLNATA*SLHILGHLEDF
Trigger: GAAATCCTCAAGATGCCCCAATATATGAAGAGACAATGCTGTAGCATTCAGGACCCCCATTAGGACTTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATAGCCTGGTTTGTTGCTaGAAGTGCCTGGCTTACATG +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHSLVCC*KCLAYM
Trigger: CATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCT...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGAGCCTGGTTTGTTGCTaGAAGTGCCTGGCTTACATG +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMSLVCC*KCLAYM
Trigger: CATGTAAGCCAGGCACTTTCAGCAACAAACCAGGCT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGACTGGCTCCTTCCTCTaGAAACTGGGAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPETGSFL*KLGVLL
Trigger: AAGGAGGACTCCCAGTTTTCAGAGGAAGGAGCCAGT...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATTGTTCCGGCCGGACATaGCTTGCATTCCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDCSGRT*LAFLCS
Trigger: GGAACAAAGGAATGCAAGTCATGTCCGGCCGGAACA...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGTTTGGTTCCTCCCCATaGTTCCACCACATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KELKLPSNHMACSAVHWWFGSSP*FHHIGA
Trigger: AGCACCAATGTGGTGGAATCATGGGGAGGAACCAAA...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCTTTGGTTCCTCCCCATaGTTCCACCACATTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIFGSSP*FHHIGA
Trigger: AGCACCAATGTGGTGGAATCATGGGGAGGAACCAAA...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp TGTGATAGAATAAATCTTCACCACATCATTGATGAATCGTCTGTTATCTTGACCCTGCAGAATTCGGAATaGCGACCCTCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CDRINLHHIIDESSVILTLQNSE*RPSTWS
Trigger: GCTCCAGGTGGAGGGTCGCCATTCCGAATTCTGCAG...GGTCAAGATAACAGACGATTCATCAATGATGTGGTGAAGATTTATTCTATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGTTCTTTGCCTTTCACTaGGTCAGGCAGGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPEFFAFH*VRQARA
Trigger: TGCTCTGGCCTGCCTGACCCAGTGAAAGGCAAAGAA...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCAGCTGGACACTTGCTaGGGACTGATATCACACCTG +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVQLDTC*GLISHL
Trigger: CAGGTGTGATATCAGTCCCCAGCAAGTGTCCAGCTG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KELKLPSNHMACSAVHWWPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCCAAAACACAGTCAGCTaGGCAGAGAGTCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGQNTVS*AESLKH
Trigger: GTGTTTGAGACTCTCTGCTCAGCTGACTGTGTTTTG...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCATTTGTGTAATCATCTaGCCCTGTCACCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: TCYKAISIFASSSHWHTSICVII*PCHHFL
Trigger: AAGGAAATGGTGACAGGGTCAGATGATTACACAAAT...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp TATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGATCTCATGGAAGTCATGTTCAGTACAGAATATTTGTaGCTGATTTCAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: YFLKPSLAGSLDLMEVMFSTEYL*LISALQ
Trigger: CTGTAATGCTGAAATCAGGCACAAATATTCTGTACT...GAACATGACTTCCATGAGATCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp TTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGACTTATATAGAATCCTGGGTTaGAAGGAGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: FTAVDRPLIQDVVAVEDLYRILG*KEDNPS
Trigger: AGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATA...TAAGTCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAACAGCTGGACACTCCTTaGACTGGTTGGTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKQLDTP*TGWFPS
Trigger: AGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTG...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATCCCACTTGTCTGTGGTaGCATCCATCTCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYPTCLW*HPSPGT
Trigger: AGTGCCAGGAGATGGATGCCACCACAGACAAGTGGG...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAATTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LINSAMGKTISPALSFPKFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAA...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATGATCCACACACTCACTaGCTCCTTCCTCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHDPHTH*LLPLKT
Trigger: AGTTTTCAGAGGAAGGAGCCAGTGAGTGTGTGGATC...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCGATCCACACACTCACTaGCTCCTTCCTCTGAAAACT +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIDPHTH*LLPLKT
Trigger: AGTTTTCAGAGGAAGGAGCCAGTGAGTGTGTGGATC...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp GTTCATTCCATACATATAATATTTCCTGAAGCCCTCTCTTGCAGGCTCCCTCGACTCCCTGCAGATTTTTaGCTCTATCCACTTGTACAT +
Preference number: 4 (lower is better)
Translates to: VHSIHIIFPEALSCRLPRLPADF*LYPLVH
Trigger: ATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAG...TCGAGGGAGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGTATGGAATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGAGGAAGTTTTCATGTTaGCAGGGAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMRKFSC*QGGHST
Trigger: GGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ATGCTCCAACCAAATTTGTGTAATCATCTGACCCTGTCACCATTTCCTTTACCGCCTTGGTTTGTCCTCTaGAACGCCCATGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: MLQPNLCNHLTLSPFPLPPWFVL*NAHVNV
Trigger: TACATTTACATGGGCGTTCCAGAGGACAAACCAAGG...CGGTAAAGGAAATGGTGACAGGGTCAGATGATTACACAAATTTGGTTGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR CAA 72 bp CTAGAAAGAGAGCAGAAAGAGTGGCATATCTTGACCTaGGTTTGTCCTCTGGAACGCCCATGTAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: LEREQKEWHILT*VCPLERPCKCK
Trigger: TTTACATTTACATGGGCGTTCCAGAGGACAAACCAAGGTCAAGATATGCCACTCTTTCTGCTCTCTTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152095.8
CDS-3UTR TCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCATCTGGCAGTTAAATaGGCCTGGTTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIHLAVK*AWFVAE
Trigger: TTCAGCAACAAACCAGGCTCATTTAACTGCCAGATG...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCTGCCAGCTGGACACTTaGTGGGGACTGATATCACAC +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFACQLDT*WGLISH
Trigger: GTGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCA...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATTACAACCATCACAGGTaGCAGCTGGACACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYYNHHR*QLDTCW
Trigger: CCAGCAAGTGTCCAGCTGGCACCTGTGATGGTTGTA...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCGATAGCACAGCTGTCTaGAGCTGGGAGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFADSTAV*SWEFTL
Trigger: GAGTGTGAACTCCCAGCTGCAGACAGCTGTGCTATC...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGTTTCTGGGACACATCTaGCAGTTAAATGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KELKLPSNHMACSAVHWWFLGHI*QLNEPG
Trigger: ACCAGGCTCATTTAACTGCCAGATGTGTCCCAGAAA...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGAGGAAGTTTTCATGTTaGCAGGGAGGACATTCCACC +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPERKFSC*QGGHST
Trigger: GGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCT...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCCTTGGTTTGTCCTCTaGAACGCCCATGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIPWFVL*NAHVNV
Trigger: TACATTTACATGGGCGTTCCAGAGGACAAACCAAGG...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAGGACACTCCTTGCACTaGTTGGTTTCCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQGHSLH*LVSFSM
Trigger: CATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCC...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCGTAGTGACTGTTTGTTaGAATATACAACATCCTCTT +
Preference number: 4 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSVVTVC*NIQHPL
Trigger: AAGAGGATGTTGTATATTCCAACAAACAGTCACTAC...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR CAA 72 bp ATGCTACAGCATTGTCTCTTCATATATTGGGGCATCTaGAGGATTTCAGCTGAACAGACTCAAAGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: MLQHCLFIYWGI*RISAEQTQSGH
Trigger: ATGACCACTTTGAGTCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATATGAAGAGACAATGCTGTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
3UTR CAA 72 bp CACCACATCATTGATGAATCGTCTGTTATCTTGACCTaGGTTTGTCCTCTGGAACGCCCATGTAAATGTAAA +
Preference number: 4 (lower is better)
Translates to: HHIIDESSVILT*VCPLERPCKCK
Trigger: TTTACATTTACATGGGCGTTCCAGAGGACAAACCAAGGTCAAGATAACAGACGATTCATCAATGATGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAATGGCACTGGTCATTCTaGATAAAGAACTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LINSAMGKTISPALSFPKWHWSF*IKNSKK
Trigger: CTTCTTTGAGTTCTTTATTCAGAATGACCAGTGCCA...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAACATCTGGCAGTTAAATaGGCCTGGTTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKHLAVK*AWFVAE
Trigger: TTCAGCAACAAACCAGGCTCATTTAACTGCCAGATG...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGAATCGTCTGTTATCTTaGCCTTGGTTTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPENRLLS*PWFVLW
Trigger: CCAGAGGACAAACCAAGGTCAAGATAACAGACGATT...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATAATCGTCTGTTATCTTaGCCTTGGTTTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDNRLLS*PWFVLW
Trigger: CCAGAGGACAAACCAAGGTCAAGATAACAGACGATT...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAAAACGTTGGAAAATCCTaGCGGCAATTCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKNVGKS*RQFIPF
Trigger: GAATGGGATGAATTGCCGGCAGGATTTTCCAACGTT...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGSVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCCGGCCGGACATGACTTaGATTCCTTTGTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFARPDMT*IPLFHL
Trigger: CAGATGGAACAAAGGAATGCAAGTCATGTCCGGCCG...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATGCTACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQCYPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTAGCA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATTGCTACCCCATCAACTaGATTAGTGGCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDCYPIN*ISGCDR
Trigger: TCTATCACAGCCACTAATGCAGTTGATGGGGTAGCA...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCCTCCCTGCAGATTTTTaGCTCTATCCACTTGTACAT +
Preference number: 4 (lower is better)
Translates to: YLMQAHSRTIILSFRPMILPADF*LYPLVH
Trigger: ATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAG...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGTCCAGTCATAGACGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KELKLPSNHMACSAVHWWSSHRR*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACGTCTATGACTGGA...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCCTTGGTTTGTCCTCTaGAACGCCCATGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVPWFVL*NAHVNV
Trigger: TACATTTACATGGGCGTTCCAGAGGACAAACCAAGG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATCCCATTCATCAAATTTaGTGCCACTGCCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYPIHQI*CHCPRS
Trigger: ACTCCTTGGGCAGTGGCATCAAATTTGATGAATGGG...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp TGTGATAGAATAAATCTTCACCACATCATTGATGAATCGTCTGTTATCTTGACCCCACCACAGTGTCCATaGATGTTGCAACGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: CDRINLHHIIDESSVILTPPQCP*MLQRWK
Trigger: TTTCCAACGTTGCAACATTCATGGACACTGTGGTGG...GGTCAAGATAACAGACGATTCATCAATGATGTGGTGAAGATTTATTCTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR TCA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTGGCACTGGTCATTCTaGATAAAGAACTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGWHWSF*IKNSKK
Trigger: CTTCTTTGAGTTCTTTATTCAGAATGACCAGTGCCA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR TCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATTTGTGTAATCATCTaGCCCTGTCACCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMICVII*PCHHFL
Trigger: AAGGAAATGGTGACAGGGTCAGATGATTACACAAAT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR TCA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAAACATATAATATTTCCTaGAGCCCTCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKTYNIS*SPLLQA
Trigger: AGCCTGCAAGAGAGGGCTTCAGGAAATATTATATGT...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATATATTGGGGCATCTTaGGGATTTCAGCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQYIGAS*GFQLNR
Trigger: TCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR GCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATCCACCTGGAGCCAGTaGTATCACATTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQSTWSQ*YHILYI
Trigger: AATATACAGAATGTGATAGCACTGGCTCCAGGTGGA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR GCA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGTCCACCTGGAGCCAGTaGTATCACATTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPESTWSQ*YHILYI
Trigger: AATATACAGAATGTGATAGCACTGGCTCCAGGTGGA...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATATAGAATCCTGGGTTaGAAGGAGGACAATCCTTCT +
Preference number: 4 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKYRILG*KEDNPS
Trigger: AGAAGGATTGTCCTCCTTGCAACCCAGGATTCTATA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCTCCCTGCAGATTTTTaGCTCTATCCACTTGTACAT +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVLPADF*LYPLVH
Trigger: ATGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATTCCAGTCATAGACGTTaGTGGTTTAAATCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYSSHRR*WFKSWD
Trigger: ATCCCAGGATTTAAACCACCAACGTCTATGACTGGA...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAAAGCTTGCTTTTCTTTaGTTCCTCCCCATGATTCCA +
Preference number: 4 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQKLAFL*FLPMIP
Trigger: TGGAATCATGGGGAGGAACCAAAGAAAAGCAAGCTT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGACTCCTTGCACTGGTTaGTTTCCTTCTCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVTPCTG*FPSQCS
Trigger: ACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGT...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATACTCCTTGCACTGGTTaGTTTCCTTCTCAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDTPCTG*FPSQCS
Trigger: ACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGT...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGGAATAATAGTTGACTaGCATACAAATGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHGIIVD*HTNAPT
Trigger: GGTTGGAGCATTTGTATGCCAGTCAACTATTATTCC...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
3UTR CAA 72 bp TTGGAATTCCCAACATTGAAGCAGGAAGTTTTCATGTaGGCAGGGAGGACATTCCACCATTTATATTCAAAC +
Preference number: 4 (lower is better)
Translates to: LEFPTLKQEVFM*AGRTFHHLYSN
Trigger: GTTTGAATATAAATGGTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000152095.8
ENSMUST00000154662.8
CDS-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCTTCAGCATTACAGAATaGGAGCCCCATTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAFSITE*EPHSPL
Trigger: CAATGGAGAATGGGGCTCCCATTCTGTAATGCTGAA...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
3UTR CAA 72 bp TGTTACTTGTATGTGTACATTTTCAGCACTGGCCGTTaGGTATTTAATAAGCAGCTGATAAACTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: CYLYVYIFSTGR*VFNKQLINSAM
Trigger: CATGGCAGAGTTTATCAGCTGCTTATTAAATACCAAACGGCCAGTGCTGAAAATGTACACATACAAGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000134991.8
ENSMUST00000152095.8
CDS-3UTR TCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCTTTACCGTAAAGTCTaGAATATTGTTGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVLYRKV*NIVGTE
Trigger: CTCTGTACCAACAATATTTCAGACTTTACGGTAAAG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR TCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATTATATTGGGGCATCTTaGGGATTTCAGCTGAACAGA +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYYIGAS*GFQLNR
Trigger: TCTGTTCAGCTGAAATCCTCAAGATGCCCCAATATA...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR GCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATTCCACCTGGAGCCAGTaGTATCACATTCTGTATATT +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYSTWSQ*YHILYI
Trigger: AATATACAGAATGTGATAGCACTGGCTCCAGGTGGA...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CAAGGCATATGTTTATGTCTGCCTTCCAACACATATTTTGTATGTAGACAGTATAGTGTCCATGAATGTTaGAACGTTGGAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: QGICLCLPSNTYFVCRQYSVHEC*NVGKSC
Trigger: GCAGGATTTTCCAACGTTGCAACATTCATGGACACT...ATACTGTCTACATACAAAATATGTGTTGGAAGGCAGACATAAACATATGCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR GCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGAGTACAGAATATTTGTaGCTGATTTCAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMSTEYL*LISALQ
Trigger: CTGTAATGCTGAAATCAGGCACAAATATTCTGTACT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR GCA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGTTGATATTAACGTTTTaGAAGGCAGTGTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: HPQNQILQALKHQEKHMVLILTF*KAVSTV
Trigger: CACTGTTGACACTGCCTTGCAAAACGTTAATATCAA...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGAAGATGTGGTGGCTGTaGAAGACTTATAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMKMWWL*KTYKRN
Trigger: ATTTCTTTTATAAGTCTTCCACAGCCACCACATCTT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCGGAATAATAGTTGACTaGCATACAAATGCTCCAACC +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAGIIVD*HTNAPT
Trigger: GGTTGGAGCATTTGTATGCCAGTCAACTATTATTCC...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAGTCTGAAATATTGTTaGTACAGAGAGCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFASLKYC*YREPSF
Trigger: GAAAGATGGCTCTCTGTACCAACAATATTTCAGACT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR GCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAGTACAGAATATTTGTaGCTGATTTCAGCATTACAG +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFASTEYL*LISALQ
Trigger: CTGTAATGCTGAAATCAGGCACAAATATTCTGTACT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CCA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAAGATGTGGTGGCTGTaGAAGACTTATAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAKMWWL*KTYKRN
Trigger: ATTTCTTTTATAAGTCTTCCACAGCCACCACATCTT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS GCA 90 bp CGCAGGAAGCGGGCGGCCAGAGGAGGACGAGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGCCCAGCAGCAAATCCAGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: RRKRAARGGRVSSPN*LAACERPAANPGGA
Trigger: AGCCCCGCCTGGATTTGCTGCTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGACTCGTCCTCCTCTGGCCGCCCGCTTCCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000134991.8
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS CCA 90 bp GGAAGCGGGCGGCCAGAGGAGGACGAGTCTCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAGCAGCAAATCCAGGCGGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GSGRPEEDESPAQTA*QPASAQQQIQAGLQ
Trigger: CTGGAGCCCCGCCTGGATTTGCTGCTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGACTCGTCCTCCTCTGGCCGCCCGCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000134991.8
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGGAGCCCCATTCTCCATaGTCTGTGAGCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAEEPHSP*SVSFTH
Trigger: GTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTC...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp GCCAGAATGATAGACTGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGTGGTAATCTTTCTCTaGGCACGCAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: ARMIDCDDRAARKPLLSEVVIFL*ARRKRA
Trigger: CGCCCGCTTCCTGCGTGCCAAGAGAAAGATTACCAC...TTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACAGTCTATCATTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACACTGCTGAGTTTACTAGCACGGGCTaGACTGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: RSLGGEAGAIHQRAYTAEFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAA...CTCAGCAGTGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp AGTTCCGAACCTGTGGCTCCAGTCATAGACGTTGGTGGTTTAAATCCTGGGATGGTGGTAATCTTTCTCTaGGCACGCAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SSEPVAPVIDVGGLNPGMVVIFL*ARRKRA
Trigger: CGCCCGCTTCCTGCGTGCCAAGAGAAAGATTACCAC...CATCCCAGGATTTAAACCACCAACGTCTATGACTGGAGCCACAGGTTCGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CAA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACAGTGAGCTTCACCCACTaGTCTGTGGTGGCATCCATC +
Preference number: 5 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTVSFTH*SVVASI
Trigger: GATGGATGCCACCACAGACAAGTGGGTGAAGCTCAC...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACACGGAATGCAAGCTTCCTTGCCATAGACCTGGTGGATGGACAGGTAGGTGTCTCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: TRNASFLAIDLVDGQVGVSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...GACACCTACCTGTCCATCCACCAGGTCTATGGCAAGGAAGCTTGCATTCCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp GTGCCTGGCTTACATGGAAAGCACTCTGAGGTGTATGCCACCCCTTCGATGGTGATGAATGTTGCAACGTaGGAAAATCCTGCCGGCAAT +
Preference number: 5 (lower is better)
Translates to: VPGLHGKHSEVYATPSMVMNVAT*ENPAGN
Trigger: ATTGCCGGCAGGATTTTCCAACGTTGCAACATTCAT...CACCATCGAAGGGGTGGCATACACCTCAGAGTGCTTTCCATGTAAGCCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154662.8
CDS-3UTR CAA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATCCTCCCTGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 5 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDPPCRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGG...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAGTGGTAATCTTTCTCTaGGCACGCAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LINSAMGKTISPALSFPKVVIFL*ARRKRA
Trigger: CGCCCGCTTCCTGCGTGCCAAGAGAAAGATTACCAC...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATATGAATGTTGCAACGTaGGAAAATCCTGCCGGCAAT +
Preference number: 5 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDMNVAT*ENPAGN
Trigger: ATTGCCGGCAGGATTTTCCAACGTTGCAACATTCAT...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp GATGGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCTCAAAGAAGATGTTGTaGTCCACGTACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: DGQVGVSWTLLALVGFLLSKKML*STYWYS
Trigger: TGAGTACCAGTACGTGGACAACAACATCTTCTTTGA...GAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACAATGAGCCTGGTTTGTaGCTGAAAGTGCCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDNEPGL*LKVPGL
Trigger: TAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATT...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp GTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCAATGTAGTGCCTCCCTGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 5 (lower is better)
Translates to: VGVSWTLLALVGFLLNVVPPCRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGG...CACTACATTGAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TGTGACGACAGGGCTGCCCGGAAGCCCTTACTTTCAGAAGGAATAATAGTTGACATGAATGTTGCAACGTaGGAAAATCCTGCCGGCAAT +
Preference number: 5 (lower is better)
Translates to: CDDRAARKPLLSEGIIVDMNVAT*ENPAGN
Trigger: ATTGCCGGCAGGATTTTCCAACGTTGCAACATTCAT...GTCAACTATTATTCCTTCTGAAAGTAAGGGCTTCCGGGCAGCCCTGTCGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAGTGAGCTTCACCCACTaGTCTGTGGTGGCATCCATC +
Preference number: 5 (lower is better)
Translates to: LINSAMGKTISPALSFPKVSFTH*SVVASI
Trigger: GATGGATGCCACCACAGACAAGTGGGTGAAGCTCAC...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp GATGGACAGGTAGGTGTCAGCTGGACACTCCTTGCACTGGTTGGTTTCCTTCTCTTTGGCTCTATCCACTaGTACATTATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: DGQVGVSWTLLALVGFLLFGSIH*YIICVF
Trigger: GAAGACACAGATAATGTACAAGTGGATAGAGCCAAA...GAGAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGACACCTACCTGTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTGGAATTCCCAACATaGAAGCAGGAAGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: HIRAGWQSLHEWCMALDGLEFPT*KQEVFM
Trigger: CATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAA...TCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAAGTGGTAATCTTTCTCTaGGCACGCAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKVVIFL*ARRKRA
Trigger: CGCCCGCTTCCTGCGTGCCAAGAGAAAGATTACCAC...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGGTGGTAATCTTTCTCTaGGCACGCAGGAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPEVVIFL*ARRKRA
Trigger: CGCCCGCTTCCTGCGTGCCAAGAGAAAGATTACCAC...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCTCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: TCYKAISIFASSSHWHTSSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGGAGCCCCATTCTCCATaGTCTGTGAGCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: KELKLPSNHMACSAVHWWEPHSP*SVSFTH
Trigger: GTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTC...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCGAGCCCCATTCTCCATaGTCTGTGAGCTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: YLMQAHSRTIILSFRPMIEPHSP*SVSFTH
Trigger: GTGGGTGAAGCTCACAGACAATGGAGAATGGGGCTC...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCTTTACTAGCACGGGCTaGACTGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: TCYKAISIFASSSHWHTSFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAA...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACATACGTGCTGGATGGCAGAGCCTGCATGAATGGTGTATGGCCCTTGATGGATTTTGGCTCTATCCACTaGTACATTATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TYVLDGRACMNGVWPLMDFGSIH*YIICVF
Trigger: GAAGACACAGATAATGTACAAGTGGATAGAGCCAAA...ATCCATCAAGGGCCATACACCATTCATGCAGGCTCTGCCATCCAGCACGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCCCTCCCTGCAGATTTTaGGCTCTATCCACTTGTACA +
Preference number: 5 (lower is better)
Translates to: TCYKAISIFASSSHWHTSPPCRF*ALSTCT
Trigger: TGTACAAGTGGATAGAGCCAAAAATCTGCAGGGAGG...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGGTGCCAGCTGGACACTaGCTGGGGACTGATATCACA +
Preference number: 5 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMVPAGH*LGTDIT
Trigger: TGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCAC...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp GGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCTCTTCCTGAGGTGAGCTTCACCCACTaGTCTGTGGTGGCATCCATC +
Preference number: 5 (lower is better)
Translates to: GLKLGFQLCVYTAKSLPEVSFTH*SVVASI
Trigger: GATGGATGCCACCACAGACAAGTGGGTGAAGCTCAC...CTCAGGAAGAGATTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp AAGTATTTCGTTCCCTTGGAGGTGAAGCTGGGGCCATTCATCAGCGAGCCTACATCCAGTACAGAATATTaGTGCCTGATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: KYFVPLEVKLGPFISEPTSSTEY*CLISAL
Trigger: TAATGCTGAAATCAGGCACAAATATTCTGTACTGGA...TGTAGGCTCGCTGATGAATGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp GTTCTGTGCACAGAGGGCAAGCTTCTGCACTCTCCCATAGAAAGTAGAAGGTACTTGGAATTCCCAACATaGAAGCAGGAAGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: VLCTEGKLLHSPIESRRYLEFPT*KQEVFM
Trigger: CATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAA...GTACCTTCTACTTTCTATGGGAGAGTGCAGAAGCTTGCCCTCTGTGCACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCTCAGCTGGACACTCCTaGCACTGGTTGGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGSAGHS*HWLVSF
Trigger: GAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGA...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCTCAGCTGGACACTCCTaGCACTGGTTGGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: YLMQAHSRTIILSFRPMISAGHS*HWLVSF
Trigger: GAAGGAAACCAACCAGTGCAAGGAGTGTCCAGCTGA...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGGTGCCAGCTGGACACTaGCTGGGGACTGATATCACA +
Preference number: 5 (lower is better)
Translates to: HPQNQILQALKHQEKHMVVPAGH*LGTDIT
Trigger: TGTGATATCAGTCCCCAGCAAGTGTCCAGCTGGCAC...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCAACTCAAAGAAGATGTaGTTGTCCACGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: TCYKAISIFASSSHWHTSNSKKM*LSTYWY
Trigger: GTACCAGTACGTGGACAACAACATCTTCTTTGAGTT...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CATCTTCACAGCAGTCGATCGTCCATTAATACAAGATGTGGTGGCTGTGGAAGAATGACTTGCATTCCTTaGTTCCATCTGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: HLHSSRSSINTRCGGCGRMTCIP*FHLKTS
Trigger: GGACGTTTTCAGATGGAACAAAGGAATGCAAGTCAT...TCTTCCACAGCCACCACATCTTGTATTAATGGACGATCGACTGCTGTGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGCAGGAAGTTTTCATGTaGGCAGGGAGGACATTCCAC +
Preference number: 5 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMQEVFM*AGRTFH
Trigger: GTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTG...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATCAGGAAGTTTTCATGTaGGCAGGGAGGACATTCCAC +
Preference number: 5 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHQEVFM*AGRTFH
Trigger: GTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTG...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAAAGTATTTCGTTCCCTaGGAGGTGAAGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQKYFVP*EVKLGP
Trigger: TGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATAAGTATTTCGTTCCCTaGGAGGTGAAGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDKYFVP*EVKLGP
Trigger: TGGCCCCAGCTTCACCTCCAAGGGAACGAAATACTT...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCCCTAGTAGTGACTGTTaGTTGGAATATACAACATCC +
Preference number: 5 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSPSSDC*LEYTTS
Trigger: GGATGTTGTATATTCCAACAAACAGTCACTACTAGG...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp GCAGCTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTCCAGTACAGAATATTaGTGCCTGATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: AADKLCHGKDYFSCSQLSSSTEY*CLISAL
Trigger: TAATGCTGAAATCAGGCACAAATATTCTGTACTGGA...GGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATTTTACTAGCACGGGCTaGACTGCCTTAGAACCCATA +
Preference number: 5 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHFTSTG*TALEPI
Trigger: TATGGGTTCTAAGGCAGTCAAGCCCGTGCTAGTAAA...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCAATGAGCCTGGTTTGTaGCTGAAAGTGCCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGNEPGL*LKVPGL
Trigger: TAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATT...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGAATGAGCCTGGTTTGTaGCTGAAAGTGCCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LYLMQAHSRTIILSFRPMNEPGL*LKVPGL
Trigger: TAAGCCAGGCACTTTCAGCAACAAACCAGGCTCATT...CATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGCAGGAAGTTTTCATGTaGGCAGGGAGGACATTCCAC +
Preference number: 5 (lower is better)
Translates to: HPQNQILQALKHQEKHMVQEVFM*AGRTFH
Trigger: GTGGAATGTCCTCCCTGCCAACATGAAAACTTCCTG...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAGACATGCGTATAAGCTaGCTTTTCTTTGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LINSAMGKTISPALSFPKDMRIS*LFFGSS
Trigger: GGAGGAACCAAAGAAAAGCAAGCTTATACGCATGTC...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACATGTTATAAGGCAATCAGCATTTTTGCCTCCTCCTCTCATTGGCACACCTCCGGGAACATATCCTCCTaGATATTAACGTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: TCYKAISIFASSSHWHTSGNISS*ILTFCK
Trigger: CTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC...GGAGGTGTGCCAATGAGAGGAGGAGGCAAAAATGCTGATTGCCTTATAACATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATTCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp ACTTATAAAAGAAATGAACATCTGGTACTTGGCTCGGTGACACTGGGAACATATTCCCATTCATCAAATTaGATGCCACTGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: TYKRNEHLVLGSVTLGTYSHSSN*MPLPKE
Trigger: CTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGA...ATATGTTCCCAGTGTCACCGAGCCAAGTACCAGATGTTCATTTCTTTTATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATATGAATGTTGCAACGTaGGAAAATCCTGCCGGCAAT +
Preference number: 5 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHMNVAT*ENPAGN
Trigger: ATTGCCGGCAGGATTTTCCAACGTTGCAACATTCAT...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CTGATAAACTCTGCCATGGGAAAGACTATTTCTCCTGCTCTCAGCTTTCCTAAAATGACTTGCATTCCTTaGTTCCATCTGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: LINSAMGKTISPALSFPKMTCIP*FHLKTS
Trigger: GGACGTTTTCAGATGGAACAAAGGAATGCAAGTCAT...TTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGCAGAGTTTATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCGACATGCGTATAAGCTaGCTTTTCTTTGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGDMRIS*LFFGSS
Trigger: GGAGGAACCAAAGAAAAGCAAGCTTATACGCATGTC...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGTCAAAGAAGATGTTGTaGTCCACGTACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: KELKLPSNHMACSAVHWWSKKML*STYWYS
Trigger: TGAGTACCAGTACGTGGACAACAACATCTTCTTTGA...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATTCAAAGAAGATGTTGTaGTCCACGTACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHSKKML*STYWYS
Trigger: TGAGTACCAGTACGTGGACAACAACATCTTCTTTGA...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp TATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATCAACTCAAAGAAGATGTaGTTGTCCACGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: YLMQAHSRTIILSFRPMINSKKM*LSTYWY
Trigger: GTACCAGTACGTGGACAACAACATCTTCTTTGAGTT...GATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp AAAGAATTAAAGTTACCCAGTAATCATATGGCATGCTCAGCAGTGCATTGGTGGTTCATTCCATCGCACTaGGAATTCCCAACATTGAAG +
Preference number: 5 (lower is better)
Translates to: KELKLPSNHMACSAVHWWFIPSH*EFPTLK
Trigger: CTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAA...CCACCAATGCACTGCTGAGCATGCCATATGATTACTGGGTAACTTTAATTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACAAGACATACGTGGAAACACAAGGCATATGTTTATGTCTGCCTTCCAACACATATGCTCCAACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: TRHTWKHKAYVYVCLPTHMLQPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTTGGAGCAT...ATGTGTTGGAAGGCAGACATAAACATATGCCTTGTGTTTCCACGTATGTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCAAAGAAGATGTTGTaGTCCACGTACTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKSKKML*STYWYS
Trigger: TGAGTACCAGTACGTGGACAACAACATCTTCTTTGA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATTTCATTCCATCGCACTaGGAATTCCCAACATTGAAG +
Preference number: 5 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDFIPSH*EFPTLK
Trigger: CTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAA...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATTCATTCCATCGCACTaGGAATTCCCAACATTGAAG +
Preference number: 5 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKFIPSH*EFPTLK
Trigger: CTTCAATGTTGGGAATTCCAAGTGCGATGGAATGAA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGATATGCTCCAACCAAATTaGTGTAATCATCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LFDASPFTYNHSLIQTHDMLQPN*CNHLTL
Trigger: CAGGGTCAGATGATTACACAAATTTGGTTGGAGCAT...ATCATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATGGGAACATATCCTCCTaGATATTAACGTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHGNISS*ILTFCK
Trigger: CTTGCAAAACGTTAATATCAAGGAGGATATGTTCCC...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCCCTAGTAGTGACTGTTaGTTGGAATATACAACATCC +
Preference number: 5 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGPSSDC*LEYTTS
Trigger: GGATGTTGTATATTCCAACAAACAGTCACTACTAGG...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGATATATTGGGGCATCTaGAGGATTTCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: HPQNQILQALKHQEKHMVIYWGI*RISAEQ
Trigger: CTGTTCAGCTGAAATCCTCAAGATGCCCCAATATAT...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCATGAATGTTGCAACGTaGGAAAATCCTGCCGGCAAT +
Preference number: 5 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAMNVAT*ENPAGN
Trigger: ATTGCCGGCAGGATTTTCCAACGTTGCAACATTCAT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CACCCACAAAATCAAATATTACAAGCACTGAAACACCAGGAAAAACACATGGTGTTTGGCTCTATCCACTaGTACATTATCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: HPQNQILQALKHQEKHMVFGSIH*YIICVF
Trigger: GAAGACACAGATAATGTACAAGTGGATAGAGCCAAA...CACCATGTGTTTTTCCTGGTGTTTCAGTGCTTGTAATATTTGATTTTGTGGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAATTGGAATTCCCAACATaGAAGCAGGAAGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQLEFPT*KQEVFM
Trigger: CATGAAAACTTCCTGCTTCAATGTTGGGAATTCCAA...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCGACATGCGTATAAGCTaGCTTTTCTTTGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FCSLTKYVTCYKAISIFADMRIS*LFFGSS
Trigger: GGAGGAACCAAAGAAAAGCAAGCTTATACGCATGTC...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTTCCAAATCTTCTCCCAAAGTACAAGAACAAGACATACGTGGAAACACAAGGCATCTTCACCACATCATaGATGAATCGTCTGTTATCT +
Preference number: 5 (lower is better)
Translates to: FPNLLPKYKNKTYVETQGIFTTS*MNRLLS
Trigger: AGATAACAGACGATTCATCAATGATGTGGTGAAGAT...GCCTTGTGTTTCCACGTATGTCTTGTTCTTGTACTTTGGGAGAAGATTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATATCTTCACCACATCATaGATGAATCGTCTGTTATCT +
Preference number: 5 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHIFTTS*MNRLLS
Trigger: AGATAACAGACGATTCATCAATGATGTGGTGAAGAT...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp CCTTTATTTGATGCAAGCCCATTCACGTACAATCATTCTCTCATTCAGACCCATAAGTCTGAAATATTGTaGGTACAGAGAGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: PLFDASPFTYNHSLIQTHKSEIL*VQRAIF
Trigger: AAAGATGGCTCTCTGTACCAACAATATTTCAGACTT...ATGGGTCTGAATGAGAGAATGATTGTACGTGAATGGGCTTGCATCAAATAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134991.8
CDS-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCAACTCAAAGAAGATGTaGTTGTCCACGTACTGGTAC +
Preference number: 5 (lower is better)
Translates to: FCSLTKYVTCYKAISIFANSKKM*LSTYWY
Trigger: GTACCAGTACGTGGACAACAACATCTTCTTTGAGTT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp CAGTGCATTGGTGGGCTTAAACTTGGGTTTCAGTTATGTGTATATACAGCTAAATCCAGTACAGAATATTaGTGCCTGATTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: QCIGGLKLGFQLCVYTAKSSTEY*CLISAL
Trigger: TAATGCTGAAATCAGGCACAAATATTCTGTACTGGA...TTTAGCTGTATATACACATAACTGAAACCCAAGTTTAAGCCCACCAATGCACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCATGACTTGCATTCCTTaGTTCCATCTGAAAACGTCC +
Preference number: 5 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAMTCIP*FHLKTS
Trigger: GGACGTTTTCAGATGGAACAAAGGAATGCAAGTCAT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000155764.8
CDS-3UTR CAA 90 bp ACTCTAATTCCCAGGTCTAAATGTTTACACAAGCTTGATCAAGTTCACCGTCAAAAGTCTGAAATATTGTaGGTACAGAGAGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: TLIPRSKCLHKLDQVHRQKSEIL*VQRAIF
Trigger: AAAGATGGCTCTCTGTACCAACAATATTTCAGACTT...TTGACGGTGAACTTGATCAAGCTTGTGTAAACATTTAGACCTGGGAATTAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069538.14
CDS-3UTR CAA 90 bp TTCTGTAGTTTGACAAAGTATGTGACATGTTATAAGGCAATCAGCATTTTTGCCATATATTGGGGCATCTaGAGGATTTCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: FCSLTKYVTCYKAISIFAIYWGI*RISAEQ
Trigger: CTGTTCAGCTGAAATCCTCAAGATGCCCCAATATAT...GGCAAAAATGCTGATTGCCTTATAACATGTCACATACTTTGTCAAACTACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
CDS GCA 72 bp CGGGCGGCCAGAGGAGGACGAGTCTCCAGCCCAAACTaGCTGGCAGCCTGCGAGCGCCCAGCAGCAAATCCA +
Preference number: 6 (lower is better)
Translates to: RAARGGRVSSPN*LAACERPAANP
Trigger: TGGATTTGCTGCTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGACTCGTCCTCCTCTGGCCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000134991.8
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8
CDS CCA 72 bp CGGCCAGAGGAGGACGAGTCTCCAGCCCAAACTGCCTaGCAGCCTGCGAGCGCCCAGCAGCAAATCCAGGCG +
Preference number: 6 (lower is better)
Translates to: RPEEDESPAQTA*QPASAQQQIQA
Trigger: CGCCTGGATTTGCTGCTGGGCGCTCGCAGGCTGCCAGGCAGTTTGGGCTGGAGACTCGTCCTCCTCTGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000069538.14
ENSMUST00000115348.9
ENSMUST00000134991.8
ENSMUST00000152095.8
ENSMUST00000154662.8
ENSMUST00000155764.8