Pregenerated sensors for ELAPOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040412Ensembl transcript IDs: ENSMUST00000048012.13, ENSMUST00000106625.10, ENSMUST00000185128.8
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTaGAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: AAGSAGLLAPKLPQA*RVVCPGEEAGEAGR Trigger: CCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | GGCTGGCAAAGCCGTGAGGTAGCTCATCCCACTCATCAAATCGGATaGCAGTGCCGAGGGAGTAGCGGCCCTCCGCGCAGGGCTTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GWQSREVAHPTHQIG*QCRGSSGPPRRACR Trigger: CCTGCAAGCCCTGCGCGGAGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | CAAAGCCGTGAGGTAGCTCATCCCACTCATCAAATCGGATGCCAGTaGCGAGGGAGTAGCGGCCCTCCGCGCAGGGCTTGCAGGACTGGT | + |
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Preference number: 1 (lower is better) Translates to: QSREVAHPTHQIGCQ*RGSSGPPRRACRTG Trigger: ACCAGTCCTGCAAGCCCTGCGCGGAGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCTTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | TTCACAGGTGCTGTTGTCGGTTTTGAAGAAGCCCGGGTTACAGGGTaGGCAGCGGGTCTTCACACCAGAGGCGGGCAGCTTCACCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: FTGAVVGFEEARVTG*AAGLHTRGGQLHRP Trigger: GGGGCGGTGAAGCTGCCCGCCTCTGGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGCACCTGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | CGGCAGGCTCAGTTCCTGCTGGGCAGTGGGTACAATCCGAGCCGTTaGAGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTTGTCGG | + |
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Preference number: 1 (lower is better) Translates to: RQAQFLLGSGYNPSR*STSRMGKVHRCCCR Trigger: CCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | CCAAGGTCATGTCTGTTGACACTCCAACAAGTCGGTCAGCAAGGCTaGCGGGCTGTGAGGACACCCCGGCCTTGTAGCCCATCACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PRSCLLTLQQVGQQG*RAVRTPRPCSPSPQ Trigger: CTGAGGTGATGGGCTACAAGGCCGGGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGACTTGTTGGAGTGTCAACAGACATGACCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | GGGGAACCCACTTGGACGAAGTGCAGTTCTCAGTGGACTCCGAGATaGTGTCATCGACCTCCAAGTTGGCCGAGAGGCTGGCAAAGCCGT | + |
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Preference number: 1 (lower is better) Translates to: GEPTWTKCSSQWTPR*CHRPPSWPRGWQSR Trigger: ACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | TGTAGTCTCCCCGGGGAACCCACTTGGACGAAGTGCAGTTCTCAGTaGACTCCGAGATGCTGTCATCGACCTCCAAGTTGGCCGAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: CSLPGEPTWTKCSSQ*TPRCCHRPPSWPRG Trigger: GCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGGGAGACTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | ATGCTGTCATCGACCTCCAAGTTGGCCGAGAGGCTGGCAAAGCCGTaGGGTAGCTCATCCCACTCATCAAATCGGATGCCAGTGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: MLSSTSKLAERLAKP*GSSSHSSNRMPVPR Trigger: CCTCGGCACTGGCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | AGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTTGTCGGTTTTaGAGAAGCCCGGGTTACAGGGTGGGCAGCGGGTCTTCACACCAG | + |
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Preference number: 1 (lower is better) Translates to: STSRMGKVHRCCCRF*RSPGYRVGSGSSHQ Trigger: CTGGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | TGCTGGGCAGTGGGTACAATCCGAGCCGTTGGAGTACGAGCCGTATaGGCAAGGTTCACAGGTGCTGTTGTCGGTTTTGAAGAAGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: CWAVGTIRAVGVRAV*ARFTGAVVGFEEAR Trigger: CCGGGCTTCTTCAAAACCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | CCCCTGCCAGAGAGACGGTGCCTGCCAGAGCTGAGAAGTTGTAGTTaGAAATCCTGCTGGGGGTGTTTCGGGAGAAGGTGCAGTCGTTGT | + |
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Preference number: 1 (lower is better) Translates to: PLPERRCLPELRSCS*KSCWGCFGRRCSRC Trigger: ACAACGACTGCACCTTCTCCCGAAACACCCCCAGCAGGATTTTCAACTACAACTTCTCAGCTCTGGCAGGCACCGTCTCTCTGGCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | TGGGTAGCCGCAGGGTGCCAGGAGCAGCTTTCATTGGATTGCATCTaGGGCGGATGGTGGTTGATCTTCCAGAACTGCAGGACTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: WVAAGCQEQLSLDCI*GGWWLIFQNCRTGS Trigger: TGACCCAGTCCTGCAGTTCTGGAAGATCAACCACCATCCGCCTCAGATGCAATCCAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | TGTTGGAGGCGATGTAGTCTCCCCGGGGAACCCACTTGGACGAAGTaGAGTTCTCAGTGGACTCCGAGATGCTGTCATCGACCTCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: CWRRCSLPGEPTWTK*SSQWTPRCCHRPPS Trigger: ACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGGGAGACTACATCGCCTCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | TGGACTCCGAGATGCTGTCATCGACCTCCAAGTTGGCCGAGAGGCTaGCAAAGCCGTGAGGTAGCTCATCCCACTCATCAAATCGGATGC | + |
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Preference number: 1 (lower is better) Translates to: WTPRCCHRPPSWPRG*QSREVAHPTHQIGC Trigger: GCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | TGCAGTTCTCAGTGGACTCCGAGATGCTGTCATCGACCTCCAAGTTaGCCGAGAGGCTGGCAAAGCCGTGAGGTAGCTCATCCCACTCAT | + |
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Preference number: 1 (lower is better) Translates to: CSSQWTPRCCHRPPS*PRGWQSREVAHPTH Trigger: ATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | ACAGGAAGTGGAAGTTACAGCCATCACAGGTCCCATCAGAGCACATaGTGGGTAGCCGCAGGGTGCCAGGAGCAGCTTTCATTGGATTGC | + |
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Preference number: 1 (lower is better) Translates to: TGSGSYSHHRSHQST*WVAAGCQEQLSLDC Trigger: GCAATCCAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTAACTTCCACTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | GGAAGTGGAAGTTACAGCCATCACAGGTCCCATCAGAGCACATGCTaGGTAGCCGCAGGGTGCCAGGAGCAGCTTTCATTGGATTGCATC | + |
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Preference number: 1 (lower is better) Translates to: GSGSYSHHRSHQSTC*VAAGCQEQLSLDCI Trigger: GATGCAATCCAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTAACTTCCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | GATCTTGTTATTCTTGGTCCCTGGACCACAGGGCACACAGGCCTGTaGACCGTAAGGCTGGTGAGCTTTCAGGATGGTGTTAGAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: DLVILGPWTTGHTGL*TVRLVSFQDGVRGT Trigger: TGTCCCTCTAACACCATCCTGAAAGCTCACCAGCCTTACGGTGCACAGGCCTGTGTGCCCTGTGGTCCAGGGACCAAGAATAACAAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | ATTCATCTGTGTTGGAGGCGATGTAGTCTCCCCGGGGAACCCACTTaGACGAAGTGCAGTTCTCAGTGGACTCCGAGATGCTGTCATCGA | + |
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Preference number: 1 (lower is better) Translates to: IHLCWRRCSLPGEPT*TKCSSQWTPRCCHR Trigger: TCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGGGAGACTACATCGCCTCCAACACAGATGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | GGTAACTCTCTGCTCAGGCAGGGAAATGCCCCCAGAGCACAGCTTTaGTTCTCGCCACATGTAAGTAGTCTTCTGGATCCCAGCCACACA | + |
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Preference number: 1 (lower is better) Translates to: GNSLLRQGNAPRAQL*FSPHVSSLLDPSHT Trigger: TGTGTGGCTGGGATCCAGAAGACTACTTACATGTGGCGAGAACCAAAGCTGTGCTCTGGGGGCATTTCCCTGCCTGAGCAGAGAGTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | AGGACGTTTCTCCTTTGTTTGAGTAGTAGTTGGCTGGACAAAGCTTaGAGAAAGGGGAGCCCTGCTTGGCAGCGTATGTGCCAGGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: RTFLLCLSSSWLDKA*RKGSPAWQRMCQAC Trigger: GCAAGCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACAAAGGAGAAACGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CCA 90 bp | CATCACACGGATGGCAGGACGTTTCTCCTTTGTTTGAGTAGTAGTTaGCTGGACAAAGCTTGCAGAAAGGGGAGCCCTGCTTGGCAGCGT | + |
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Preference number: 1 (lower is better) Translates to: HHTDGRTFLLCLSSS*LDKACRKGSPAWQR Trigger: ACGCTGCCAAGCAGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACAAAGGAGAAACGTCCTGCCATCCGTGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | CCTGAGCATCACAGGCTGTGTGGGTGTAGAAATAGTCCTTGTCTGTaGAGGCTGGGCGCACTTTGCAGGTGGAAGATCCTTTTTCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: PEHHRLCGCRNSPCL*RLGALCRWKILFLS Trigger: ACTCAGAAAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATTTCTACACCCACACAGCCTGTGATGCTCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | GTATTTGTCAGCATCACACGGATGGCAGGACGTTTCTCCTTTGTTTaGGTAGTAGTTGGCTGGACAAAGCTTGCAGAAAGGGGAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: VFVSITRMAGRFSFV*VVVGWTKLAERGAL Trigger: CAGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACAAAGGAGAAACGTCCTGCCATCCGTGTGATGCTGACAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | ATGAGAGCAGCCATGGCTAGTCAGATGGGCAAGCCATTTTGTGGCTaGCAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACCT | + |
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Preference number: 1 (lower is better) Translates to: MRAAMASQMGKPFCG*QTPQKCLSVLYQPP Trigger: AGGTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATGGCTTGCCCATCTGACTAGCCATGGCTGCTCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR CCA 90 bp | TGTAGAAATAGTCCTTGTCTGTGCAGGCTGGGCGCACTTTGCAGGTaGAAGATCCTTTTTCTGAGTATTTGTCAGCATCACACGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: CRNSPCLCRLGALCR*KILFLSICQHHTDG Trigger: GCCATCCGTGTGATGCTGACAAATACTCAGAAAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATTTCTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR TCA 90 bp | TCTAAATCCTGGTACAACCAGAGTGAGAATCATGAAGTCGTTGTCTaGGGCACCAACAGCTGTATAAATGTGGTCACCAGCCACCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SKSWYNQSENHEVVV*GTNSCINVVTSHLP Trigger: TGGGAGGTGGCTGGTGACCACATTTATACAGCTGTTGGTGCCTCAGACAACGACTTCATGATTCTCACTCTGGTTGTACCAGGATTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR GCA 90 bp | ATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTaGGAGTTGGTACCTAATCTACTTTTCAGAGGGGTGTTGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: IAGVKGRWEEESHST*ELVPNLLFRGVLPE Trigger: TTCTGGCAACACCCCTCTGAAAAGTAGATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR TCA 90 bp | GATGCCTTTGATGGCCAAAAGTCATGGCGTAGCTTCACTTCTTTCTaGTTCTTAGAAGCCATCATGAGAGCAGCCATGGCTAGTCAGATG | + |
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Preference number: 1 (lower is better) Translates to: DAFDGQKSWRSFTSF*FLEAIMRAAMASQM Trigger: CATCTGACTAGCCATGGCTGCTCTCATGATGGCTTCTAAGAATCAGAAAGAAGTGAAGCTACGCCATGACTTTTGGCCATCAAAGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR TCA 90 bp | ATAGACTTTCCCCCATGTCTTCCAGAACAGTCTAAATATCTCCTGTaGTCTTCAACACAGAAAGCAGTTATTCCATGGGAAGCAGACATC | + |
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Preference number: 1 (lower is better) Translates to: IDFPPCLPEQSKYLL*SSTQKAVIPWEADI Trigger: GATGTCTGCTTCCCATGGAATAACTGCTTTCTGTGTTGAAGATCACAGGAGATATTTAGACTGTTCTGGAAGACATGGGGGAAAGTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR CCA 90 bp | TCTATTCTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATaGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATCTA | + |
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Preference number: 1 (lower is better) Translates to: SILGFLLIIAGVKGR*EEESHSTCELVPNL Trigger: TAGATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR CCA 90 bp | GGTGCAAAAAGTGCTATCATTGAATCAGTGCTGTTTGAGGATGCTTaGGAGGAAGGACATTCAATTCCAGGATGTCTGAATAAAGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: GAKSAIIESVLFEDA*EEGHSIPGCLNKEV Trigger: GACTTCTTTATTCAGACATCCTGGAATTGAATGTCCTTCCTCCCAAGCATCCTCAAACAGCACTGATTCAATGATAGCACTTTTTGCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR CCA 90 bp | TTATTCTCTGTATTATTCTATTCTAGGTTTTCTACTGATTATAGCTaGAGTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGA | + |
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Preference number: 1 (lower is better) Translates to: LFSVLFYSRFSTDYS*SEREMGRGIPLYLR Trigger: TCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAATAGAATAATACAGAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGGGTAGTGTGCCCAGGTaGGGAGGCAGGCGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGGSVPR*GGRRGR Trigger: CCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACC...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGGTCGGTCAGCAAGGCTaGCGGGCTGTGAGGACACCC | + |
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Preference number: 2 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGVGQQG*RAVRTP Trigger: GGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGAC...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCGTCCTCTCCTTCCATaGTGGCACAGCTGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGRPLLP*WHSCLL Trigger: CAGCAGACAGCTGTGCCATCATGGAAGGAGAGGACG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCAGGTAGTGTGCCCAGGTaGGGAGGCAGGCGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPGSVPR*GGRRGR Trigger: CCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACC...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCAGCCTGCAGGGTAGTGTaGCCAGGTGAGGAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPACRVV*PGEEAG Trigger: GCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTGCATTCATCTGTGTTaGAGGCGATGTAGTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGCIHLC*RRCSLP Trigger: GGGGAGACTACATCGCCTCCAACACAGATGAATGCA...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CAA 90 bp | GATAAGGCCACAATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTaGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DKATMKRFPAAGSAG*LAPKLPQACRVVCP Trigger: TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCATTGTGGCCTTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
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| 3UTR CAA 90 bp | GAGCCGTTGGAGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTaGTCGGTTTTGAAGAAGCCCGGGTTACAGGGTGGGCAGCGGGTC | + |
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Preference number: 2 (lower is better) Translates to: EPLEYEPYGQGSQVL*SVLKKPGLQGGQRV Trigger: GACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CAA 90 bp | ACGGCAGGCTCAGTTCCTGCTGGGCAGTGGGTACAATCCGAGCCGTaGGAGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTTGTCG | + |
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Preference number: 2 (lower is better) Translates to: TAGSVPAGQWVQSEP*EYEPYGQGSQVLLS Trigger: CGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGCCATCACAGGTCCCATCAGAGCACATGCTGGGTAGCCGCAGGGTGCCAGCGTATGTGCCAGGCTTaGAGGGGAAACACTCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: YSHHRSHQSTCWVAAGCQRMCQA*RGNTRR Trigger: CCTCCGAGTGTTTCCCCTGCAAGCCTGGCACATACG...CTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTCCAAAAGTAGCAGGTCAGGACAGTAAGCAGGATGGCAGTGCAGGTGCCGCCCGGGTTACAGGGTaGGCAGCGGGTCTTCACACC | + |
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Preference number: 2 (lower is better) Translates to: LLPKVAGQDSKQDGSAGAARVTG*AAGLHT Trigger: GGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGC...GGCACCTGCACTGCCATCCTGCTTACTGTCCTGACCTGCTACTTTTGGAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| 3UTR CAA 90 bp | GAGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTTGTCGGTTTaGAAGAAGCCCGGGTTACAGGGTGGGCAGCGGGTCTTCACACCA | + |
|
Preference number: 2 (lower is better) Translates to: EYEPYGQGSQVLLSV*KKPGLQGGQRVFTP Trigger: TGGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGATCCCAGCCACACAGCTGCTGACAAAAGTGTGGTAGTCAGAGGCCGAGCATGGGTAGCCGCAGGGTaGCAGGAGCAGCTTTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LDPSHTAADKSVVVRGRAWVAAG*QEQLSL Trigger: CAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCA...TGCTCGGCCTCTGACTACCACACTTTTGTCAGCAGCTGTGTGGCTGGGATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTGCCTGCAGGGTAGTGTaGCCAGGTGAGGAGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RSVGIFGRLEASVETGLGACRVV*PGEEAG Trigger: GCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCAAACACCTCAGAAATaGCTCTCTGTCTTATACCAA | + |
|
Preference number: 2 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGQTPQK*LSVLYQ Trigger: TTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTCCAAAAGTAGCAGGTCAGGACAGTAAGCAGGATGGCAGTGCAGGTGCCCATCAGAGCACATGCTaGGTAGCCGCAGGGTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLPKVAGQDSKQDGSAGAHQSTC*VAAGCQ Trigger: CTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATG...GGCACCTGCACTGCCATCCTGCTTACTGTCCTGACCTGCTACTTTTGGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCCCAGCCTGTCAGGCCCTTGTATTCAAAGTTGATCCCACTGAGAACCGTAGCTGTGTCTCTCCCTaGGCATCACAGGCTGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: HLPACQALVFKVDPTENRSCVSP*ASQAVW Trigger: CCACACAGCCTGTGATGCTCAGGGAGAGACACAGCT...ACGGTTCTCAGTGGGATCAACTTTGAATACAAGGGCCTGACAGGCTGGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTTCCAAAAGTAGCAGGTCAGGACAGTAAGCAGGATGGCAGTGCAGGTGCCGGCAGGCTCAGTTCCTaGTGGGCAGTGGGTACAATC | + |
|
Preference number: 2 (lower is better) Translates to: LLPKVAGQDSKQDGSAGAGRLSS*WAVGTI Trigger: GATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCC...GGCACCTGCACTGCCATCCTGCTTACTGTCCTGACCTGCTACTTTTGGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 90 bp | TGGTCACCAGCCACCTCCCAGCCTGTCAGGCCCTTGTATTCAAAGTaGATCCCACTGAGAACCGTAGTTTCCATGTTGGAGGGCAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: WSPATSQPVRPLYSK*IPLRTVVSMLEGSV Trigger: CACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGGGATCAACTTTGAATACAAGGGCCTGACAGGCTGGGAGGTGGCTGGTGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCCAAAAGTAGCAGGTCAGGACAGTAAGCAGGATGGCAGTGCAGGTGCCGAGGCGGATGGTGGTTaGTCTTCCAGAACTGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLPKVAGQDSKQDGSAGAEADGG*SSRTAG Trigger: TCCTGCAGTTCTGGAAGATCAACCACCATCCGCCTC...GGCACCTGCACTGCCATCCTGCTTACTGTCCTGACCTGCTACTTTTGGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAATCCGAGCCGTTGGAGTACGAGCCGTATGGGCAAGGTTCACAGGTGCTGTTACTCATCAAATCGGATaGCAGTGCCGAGGGAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TIRAVGVRAVWARFTGAVTHQIG*QCRGSS Trigger: GCTACTCCCTCGGCACTGGCATCCGATTTGATGAGT...AACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGATCCCAGCCACACAGCTGCTGACAAAAGTGTGGTAGTCAGAGGCCGAGCAACATCAGTGTGGCGGTaGATTCATCTGTGTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LDPSHTAADKSVVVRGRATSVWR*IHLCWR Trigger: CCTCCAACACAGATGAATGCACCGCCACACTGATGT...TGCTCGGCCTCTGACTACCACACTTTTGTCAGCAGCTGTGTGGCTGGGATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 90 bp | CAGGTGCCAGCCGAGATGCCCACTTTTAACCAGAAATCGATCGTTTaGCAGATGGTAACTCTCTGCTCAGGCAGGGAAATGCCCCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QVPAEMPTFNQKSIV*QMVTLCSGREMPPE Trigger: CTCTGGGGGCATTTCCCTGCCTGAGCAGAGAGTTACCATCTGCAAAACGATCGATTTCTGGTTAAAAGTGGGCATCTCGGCTGGCACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGTGAGCCTCTTCCTTTGGAAACCATCCCAGGAAAGAGTAAGGTAGAGGTGAAGTCGAGGCTGCCATaGGGACTGTCCCTCAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: TGEPLPLETIPGKSKVEVKSRLP*GLSLRP Trigger: TGGTCTGAGGGACAGTCCTCATGGCAGCCTCGACTT...CACCTCTACCTTACTCTTTCCTGGGATGGTTTCCAAAGGAAGAGGCTCACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTCCAAAAGTAGCAGGTCAGGACAGTAAGCAGGATGGCAGTGCAGGTGCCCTGTTTCATGAAGGGTaGTCCTCTGGAAGGCCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LLPKVAGQDSKQDGSAGALFHEG*SSGRPM Trigger: CATGGGCCTTCCAGAGGACCACCCTTCATGAAACAG...GGCACCTGCACTGCCATCCTGCTTACTGTCCTGACCTGCTACTTTTGGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGCTGGGGGTGTTTCGGGAGAAGGTGCAGTCGTTGTAGCAGAGAGAGTGGACGTTTCTCCTTTGTTTaGGTAGTAGTTGGCTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SCWGCFGRRCSRCSRESGRFSFV*VVVGWT Trigger: TGTCCAGCCAACTACTACTCAAACAAAGGAGAAACG...TCCACTCTCTCTGCTACAACGACTGCACCTTCTCCCGAAACACCCCCAGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGCTTTGGTTCTCGCCACATGTAAGTAGTCTTCTGGATCCCAGCCACACATGGCCCATTTGTACATaGGCTGTGTCTCTCCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: AQLWFSPHVSSLLDPSHTWPICT*AVSLPE Trigger: CTCAGGGAGAGACACAGCTCATGTACAAATGGGCCA...TGTGTGGCTGGGATCCAGAAGACTACTTACATGTGGCGAGAACCAAAGCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGTGCCAGCCGAGATGCCCACTTTTAACCAGAAATCGATCGTTTTGCAGAGGATCCGGAGGTCAGTaGCATTGTCTGTGCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: CRCQPRCPLLTRNRSFCRGSGGQ*HCLCTQ Trigger: CTGTGTGCACAGACAATGTCACTGACCTCCGGATCC...TCTGCAAAACGATCGATTTCTGGTTAAAAGTGGGCATCTCGGCTGGCACCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGGGTAGTGTGCCCAGGTaGGGAGGCAGGCGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRGSVPR*GGRRGR Trigger: CCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACC...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGCTTTGGTTCTCGCCACATGTAAGTAGTCTTCTGGATCCCAGCCACACATCATTGGATTGCATCTaGGGCGGATGGTGGTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: AQLWFSPHVSSLLDPSHTSLDCI*GGWWLI Trigger: GATCAACCACCATCCGCCTCAGATGCAATCCAATGA...TGTGTGGCTGGGATCCAGAAGACTACTTACATGTGGCGAGAACCAAAGCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACTGAGAACCGTAGTTTCCATGTTGGAGGGCAGTGTGTTCCACCATTTGTACAATAGTCCTTGTCTGTaGAGGCTGGGCGCACTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: PLRTVVSMLEGSVFHHLYNSPCL*RLGALC Trigger: GCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATT...GTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 90 bp | ACAGAGCAGATGGTCTCGAAGACAAATGTGATCCTGGCCACCTCTTaGTTCTCTGTGTCTGCCACCACTGACTGTGGAGGTCTAAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TEQMVSKTNVILATS*FSVSATTDCGGLNP Trigger: AGGATTTAGACCTCCACAGTCAGTGGTGGCAGACACAGAGAACAAAGAGGTGGCCAGGATCACATTTGTCTTCGAGACCATCTGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACTGAGAACCGTAGTTTCCATGTTGGAGGGCAGTGTGTTCCACCATTTGTACCGGCATACATCAGTGTaGCGGTGCATTCATCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PLRTVVSMLEGSVFHHLYRHTSV*RCIHLC Trigger: ACACAGATGAATGCACCGCCACACTGATGTATGCCG...GTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 90 bp | AGTATTTGTCAGCATCACACGGATGGCAGGACGTTTCTCCTTTGTTaGAGTAGTAGTTGGCTGGACAAAGCTTGCAGAAAGGGGAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SICQHHTDGRTFLLC*SSSWLDKACRKGSP Trigger: AGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACAAAGGAGAAACGTCCTGCCATCCGTGTGATGCTGACAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAACACTGTGGAATTCCCATCCTTTCTCCGTAGTCTTCATCCACCTGGAGTCACAGACTGCTTTAGGTTaGCGGCATACATCAGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: STLWNSHPFSVVFIHLESQTALG*RHTSVW Trigger: CCACACTGATGTATGCCGTCAACCTAAAGCAGTCTG...TGACTCCAGGTGGATGAAGACTACGGAGAAAGGATGGGAATTCCACAGTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 90 bp | CCCTTGTATTCAAAGTTGATCCCACTGAGAACCGTAGTTTCCATGTaGGAGGGCAGTGTGTTCCACCATTTGTACTCAAATCCCACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PLYSKLIPLRTVVSM*EGSVFHHLYSNPTA Trigger: TGCCGTGGGATTTGAGTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGGGATCAACTTTGAATACAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAATCCCTGATAAGGCCACAATaGAGAGATTCCCAGCAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LGFLLIIAGVKGRWEEESLIRPQ*RDSQQR Trigger: CCGCTGCTGGGAATCTCTTCATTGTGGCCTTATCAG...GGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR TCA 90 bp | GACTGTCCACTGCTCTCTGCTCCAACTTATTACCCAGGAGAAATAAGTCGAGGCAAAGACATCATGAGCTaGAAGCCTGTATCTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: DCPLLSAPTYYPGEISRGKDIMS*KPVSDQ Trigger: CTGGTCAGATACAGGCTTTCAGCTCATGATGTCTTT...GCCTCGACTTATTTCTCCTGGGTAATAAGTTGGAGCAGAGAGCAGTGGACAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCTCAACTGTATGTTCATGGGGAGTGAAAGGGAGATaGGAAGAGGAATCCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: KPFSLADLVYVFSTVCSWGVKGR*EEESHS Trigger: AGAGTGGGATTCCTCTTCCCATCTCCCTTTCACTCC...CCATGAACATACAGTTGAGAACACATACACTAGGTCTGCAAGGGAGAACGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGTGCCAGCCGAGATGCCCACTTTTAACCAGAAATCGATCGTTTTGCAGAAATTCCCGAGGTCTCTaGGTGAAAAAGTTCAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: CRCQPRCPLLTRNRSFCRNSRGL*VKKFNW Trigger: CCAGTTGAACTTTTTCACCCAGAGACCTCGGGAATT...TCTGCAAAACGATCGATTTCTGGTTAAAAGTGGGCATCTCGGCTGGCACCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCCTGATAAGGCCACAATaGAGAGATTCCCAGCAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: KQDVSKETVHEVWVYLVGLIRPQ*RDSQQR Trigger: CCGCTGCTGGGAATCTCTTCATTGTGGCCTTATCAG...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAGATTAGACATTATCTCCTGAGCCAACTCTCTGGCCCTAAAGTTTGCGCAGGCTTGACCAAGAGATaGCTATTCCGGTATGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: IEIRHYLLSQLSGPKVCAGLTKR*LFRYGM Trigger: CATTCCATACCGGAATAGCCATCTCTTGGTCAAGCC...TGCGCAAACTTTAGGGCCAGAGAGTTGGCTCAGGAGATAATGTCTAATCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 90 bp | ACCATCCCAGGAAAGAGTAAGGTAGAGGTGCAAAAAGTGCTATCATaGAATCAGTGCTGTTTGAGGATGCTTGGGAGGAAGGACATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: TIPGKSKVEVQKVLS*NQCCLRMLGRKDIQ Trigger: TTGAATGTCCTTCCTCCCAAGCATCCTCAAACAGCACTGATTCAATGATAGCACTTTTTGCACCTCTACCTTACTCTTTCCTGGGATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACCTTCTAAAGACATCATaGGCTGAAAGCCTGTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: HFVADKHLRNASLSYTNHLLKTS*AESLYL Trigger: CAGATACAGGCTTTCAGCTCATGATGTCTTTAGAAG...GTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCTTAGACATTATCTCCTaGGCCAACTCTCTGGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: IRNPLGLGYTIIFICIPSLDIIS*ANSLAL Trigger: TAGGGCCAGAGAGTTGGCTCAGGAGATAATGTCTAA...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAGATTAGACATTATCTCCTGAGCCAACTCTCTGGCCCTAAAGTTTGCGCAACAGTACACGAAGTGTaGGTATATTTGGTAGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IEIRHYLLSQLSGPKVCATVHEV*VYLVGL Trigger: CAAGCCTACCAAATATACCCACACTTCGTGTACTGT...TGCGCAAACTTTAGGGCCAGAGAGTTGGCTCAGGAGATAATGTCTAATCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGATCCTTTTTCTGAGTATTTGTCAGCATCACACGGATGGCAGGACGTTTCTCACAGTACACGAAGTGTaGGTATATTTGGTAGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KILFLSICQHHTDGRTFLTVHEV*VYLVGL Trigger: CAAGCCTACCAAATATACCCACACTTCGTGTACTGT...GAGAAACGTCCTGCCATCCGTGTGATGCTGACAAATACTCAGAAAAAGGATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGAATCCAACATGTCTTGATGAGACACAGATATGATTTCACAAAGCCAAAAAGATATGACCATAGCTaGTCCATGCCACAGTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KGIQHVLMRHRYDFTKPKRYDHS*SMPQWA Trigger: AGCCCACTGTGGCATGGACCAGCTATGGTCATATCT...TTTTGGCTTTGTGAAATCATATCTGTGTCTCATCAAGACATGTTGGATTCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 90 bp | ACTTACCTGGTTCTTTCTAGTGTCATAAGGAAATGGGAGGGATATTaGACAAAAACAGTCGTGGAGGATAGATCTATTGGACTTTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TYLVLSSVIRKWEGY*TKTVVEDRSIGLWA Trigger: TGCCCAAAGTCCAATAGATCTATCCTCCACGACTGTTTTTGTCAAATATCCCTCCCATTTCCTTATGACACTAGAAAGAACCAGGTAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | GAGGTAGCTCATCCCACTCATCAAATCGGATGCCAGTaGCGAGGGAGTAGCGGCCCTCCGCGCAGGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVAHPTHQIGCQ*RGSSGPPRRAC Trigger: GCAAGCCCTGCGCGGAGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTGATGAGTGGGATGAGCTACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | AGCCGTGAGGTAGCTCATCCCACTCATCAAATCGGATaGCAGTGCCGAGGGAGTAGCGGCCCTCCGCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SREVAHPTHQIG*QCRGSSGPPRR Trigger: CCTGCGCGGAGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCAGCCTGTCAGGCCCTaGTATTCAAAGTTGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGQPVRP*YSKLIP Trigger: TGGGATCAACTTTGAATACAAGGGCCTGACAGGCTG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | CACTCCAACAAGTCGGTCAGCAAGGCTGACGGGCTGTaGGGACACCCCGGCCTTGTAGCCCATCACCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HSNKSVSKADGL*GHPGLVAHHLR Trigger: TCTGAGGTGATGGGCTACAAGGCCGGGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGACTTGTTGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | GCTGTTGTCGGTTTTGAAGAAGCCCGGGTTACAGGGTaGGCAGCGGGTCTTCACACCAGAGGCGGGCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVVGFEEARVTG*AAGLHTRGGQL Trigger: AAGCTGCCCGCCTCTGGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | TGTCTGTTGACACTCCAACAAGTCGGTCAGCAAGGCTaGCGGGCTGTGAGGACACCCCGGCCTTGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLLTLQQVGQQG*RAVRTPRPCSP Trigger: TGGGCTACAAGGCCGGGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGACTTGTTGGAGTGTCAACAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | GCTTGCAGAAAGGGGAGCCCTGCTTGGCAGCGTATGTaGCAGGCTTGCAGGGGAAACACTCGGAGGTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACRKGSPAWQRM*QACRGNTRRCK Trigger: CTTACACCTCCGAGTGTTTCCCCTGCAAGCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTTTCTGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | CAGTTCCTGCTGGGCAGTGGGTACAATCCGAGCCGTTaGAGTACGAGCCGTATGGGCAAGGTTCACAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QFLLGSGYNPSR*STSRMGKVHRC Trigger: GCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | GGAAGTTACAGCCATCACAGGTCCCATCAGAGCACATaGTGGGTAGCCGCAGGGTGCCAGGAGCAGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSYSHHRSHQST*WVAAGCQEQLS Trigger: TGAAAGCTGCTCCTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTAACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | CCCGGGGAACCCACTTGGACGAAGTGCAGTTCTCAGTaGACTCCGAGATGCTGTCATCGACCTCCAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGEPTWTKCSSQ*TPRCCHRPPSW Trigger: CCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | TGTTGGAGGCGATGTAGTCTCCCCGGGGAACCCACTTaGACGAAGTGCAGTTCTCAGTGGACTCCGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: CWRRCSLPGEPT*TKCSSQWTPRC Trigger: GCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGGGAGACTACATCGCCTCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | CGGCATACATCAGTGTGGCGGTGCATTCATCTGTGTTaGAGGCGATGTAGTCTCCCCGGGGAACCCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RHTSVWRCIHLC*RRCSLPGEPTW Trigger: CCAAGTGGGTTCCCCGGGGAGACTACATCGCCTCCAACACAGATGAATGCACCGCCACACTGATGTATGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATCCCAGCCACACAGCTGCTGACAAAAGTGTGGTAGTCAGAGGCCGAGCAACGGGCTTGGACACTTaGGACCACACCGAGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LDPSHTAADKSVVVRGRATGLDT*DHTEKA Trigger: AGCTTTCTCGGTGTGGTCCAAAGTGTCCAAGCCCGT...TGCTCGGCCTCTGACTACCACACTTTTGTCAGCAGCTGTGTGGCTGGGATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | TCGACCTCCAAGTTGGCCGAGAGGCTGGCAAAGCCGTaGGGTAGCTCATCCCACTCATCAAATCGGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: STSKLAERLAKP*GSSSHSSNRMP Trigger: TGGCATCCGATTTGATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | ACTTGGACGAAGTGCAGTTCTCAGTGGACTCCGAGATaGTGTCATCGACCTCCAAGTTGGCCGAGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TWTKCSSQWTPR*CHRPPSWPRGW Trigger: CCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | CGATGTAGTCTCCCCGGGGAACCCACTTGGACGAAGTaGAGTTCTCAGTGGACTCCGAGATGCTGTCATCGA | + |
|
Preference number: 3 (lower is better) Translates to: RCSLPGEPTWTK*SSQWTPRCCHR Trigger: TCGATGACAGCATCTCGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGGTTCCCCGGGGAGACTACATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | ATTCTTGGTCCCTGGACCACAGGGCACACAGGCCTGTaGACCGTAAGGCTGGTGAGCTTTCAGGATGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILGPWTTGHTGL*TVRLVSFQDGV Trigger: AACACCATCCTGAAAGCTCACCAGCCTTACGGTGCACAGGCCTGTGTGCCCTGTGGTCCAGGGACCAAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | AGTTACAGCCATCACAGGTCCCATCAGAGCACATGCTaGGTAGCCGCAGGGTGCCAGGAGCAGCTTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: SYSHHRSHQSTC*VAAGCQEQLSL Trigger: CAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGCCATCACAGGTCCCATCAGAGCACATGCTGGGTAGCCGCAGGGTGCCAGCCTCACCGCAGATTTTaGGTATGGCCCATTTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: YSHHRSHQSTCWVAAGCQPHRRF*VWPICT Trigger: TGTACAAATGGGCCATACCAAAAATCTGCGGTGAGG...CTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATGGGACCTGTGATGGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATCCCAGCCACACAGCTGCTGACAAAAGTGTGGTAGTCAGAGGCCGAGCACGGAGGTCAGTGACATaGTCTGTGCACACAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LDPSHTAADKSVVVRGRARRSVT*SVHTAI Trigger: AATGGCTGTGTGCACAGACAATGTCACTGACCTCCG...TGCTCGGCCTCTGACTACCACACTTTTGTCAGCAGCTGTGTGGCTGGGATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | GAGAGACGGTGCCTGCCAGAGCTGAGAAGTTGTAGTTaGAAATCCTGCTGGGGGTGTTTCGGGAGAAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ERRCLPELRSCS*KSCWGCFGRRC Trigger: GCACCTTCTCCCGAAACACCCCCAGCAGGATTTTCAACTACAACTTCTCAGCTCTGGCAGGCACCGTCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | GCAGGGTGCCAGGAGCAGCTTTCATTGGATTGCATCTaGGGCGGATGGTGGTTGATCTTCCAGAACTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGCQEQLSLDCI*GGWWLIFQNCR Trigger: CCTGCAGTTCTGGAAGATCAACCACCATCCGCCTCAGATGCAATCCAATGAAAGCTGCTCCTGGCACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | CCATTTGTACTCAAATCCCACGGCAGGCTCAGTTCCTaGTGGGCAGTGGGTACAATCCGAGCCGTTGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PFVLKSHGRLSS*WAVGTIRAVGV Trigger: TACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCCGTGGGATTTGAGTACAAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | AGATGCTGTCATCGACCTCCAAGTTGGCCGAGAGGCTaGCAAAGCCGTGAGGTAGCTCATCCCACTCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: RCCHRPPSWPRG*QSREVAHPTHQ Trigger: TTGATGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGACAGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | TTTGTACTCAAATCCCACGGCAGGCTCAGTTCCTGCTaGGCAGTGGGTACAATCCGAGCCGTTGGAGTACGA | + |
|
Preference number: 3 (lower is better) Translates to: FVLKSHGRLSSC*AVGTIRAVGVR Trigger: TCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCCGTGGGATTTGAGTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | GTAGCAGAGAGAGTGGATCTTGTTATTCTTGGTCCCTaGACCACAGGGCACACAGGCCTGTGCACCGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VAERVDLVILGP*TTGHTGLCTVR Trigger: CCTTACGGTGCACAGGCCTGTGTGCCCTGTGGTCCAGGGACCAAGAATAACAAGATCCACTCTCTCTGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | AACTGGGGAGACGATTCCTTCCAAGGTCATGTCTGTTaGCACTCCAACAAGTCGGTCAGCAAGGCTGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: NWGDDSFQGHVC*HSNKSVSKADG Trigger: CCCGTCAGCCTTGCTGACCGACTTGTTGGAGTGTCAACAGACATGACCTTGGAAGGAATCGTCTCCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | AGCAGTTATTCCATGGGAAGCAGACATCTAAGAGGCTaGAGGAGACTGGCTGTGAGCTCATGGCCTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSYSMGSRHLRG*RRLAVSSWPGC Trigger: ACACCCAGGCCATGAGCTCACAGCCAGTCTCCTGCAGCCTCTTAGATGTCTGCTTCCCATGGAATAACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | CACAGGCTGTGTGGGTGTAGAAATAGTCCTTGTCTGTaGAGGCTGGGCGCACTTTGCAGGTGGAAGATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HRLCGCRNSPCL*RLGALCRWKIL Trigger: AAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATTTCTACACCCACACAGCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | CTTCGATGGTGTAGGTATAGGACTGCTTGCCTTTGGTaGCCTTCCACGTCTCCACAGGAGTATTGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRWCRYRTACLW*PSTSPQEYWSW Trigger: CCAGGACCAATACTCCTGTGGAGACGTGGAAGGGCACCAAAGGCAAGCAGTCCTATACCTACACCATCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | GTGGGTACAATCCGAGCCGTTGGAGTACGAGCCGTATaGGCAAGGTTCACAGGTGCTGTTGTCGGTTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGTIRAVGVRAV*ARFTGAVVGFE Trigger: TTCAAAACCGACAACAGCACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | AAGGGTCTGAAATCCAAACTTCTGATAAGGCCACAATaGAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KGLKSKLLIRPQ*RDSQQRGAQGC Trigger: GCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCATTGTGGCCTTATCAGAAGTTTGGATTTCAGACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | GGCTGGGCGCACTTTGCAGGTGGAAGATCCTTTTTCTaGGTATTTGTCAGCATCACACGGATGGCAGGACGT | + |
|
Preference number: 3 (lower is better) Translates to: GWAHFAGGRSFF*VFVSITRMAGR Trigger: ACGTCCTGCCATCCGTGTGATGCTGACAAATACTCAGAAAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CCA 72 bp | AGGACTGAGGTCCTCACAGATGGGGGTGTTTCTCACTaGCAAGCGTTTATTCCCTTCCAGCAAAGCCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: RTEVLTDGGVSH*QAFIPFQQSQW Trigger: CCATTGGCTTTGCTGGAAGGGAATAAACGCTTGCCAGTGAGAAACACCCCCATCTGTGAGGACCTCAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | AAGAGGCTGCAGGAGACTGGCTGTGAGCTCATGGCCTaGGTGTACATAGCCACTCAAGAATATTCCCGTATG | + |
|
Preference number: 3 (lower is better) Translates to: KRLQETGCELMA*VYIATQEYSRM Trigger: CATACGGGAATATTCTTGAGTGGCTATGTACACCCAGGCCATGAGCTCACAGCCAGTCTCCTGCAGCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGAGAACCGTAGTTTCCATGTTGGAGGGCAGTGTGTTCCACCATTTGTACCAGGCTGGGCGCACTTaGCAGGTGGAAGATCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLRTVVSMLEGSVFHHLYQAGRT*QVEDPF Trigger: AAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTG...GTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | CTCAGACCACAGCCCCCTTCTAAAGACATCATGAGCTaGAAGCCTGTATCTGACCAGAAAACCTCCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRPQPPSKDIMS*KPVSDQKTSQL Trigger: CAGCTGGGAGGTTTTCTGGTCAGATACAGGCTTTCAGCTCATGATGTCTTTAGAAGGGGGCTGTGGTCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | TGTCCCTCAGACCACAGCCCCCTTCTAAAGACATCATaGGCTGAAAGCCTGTATCTGACCAGAAAACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CPSDHSPLLKTS*AESLYLTRKPP Trigger: GGGAGGTTTTCTGGTCAGATACAGGCTTTCAGCTCATGATGTCTTTAGAAGGGGGCTGTGGTCTGAGGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | AACTTATTACCCAGGAGAAATAAGTCGAGGCTGCCATaGGGACTGTCCCTCAGACCACAGCCCCCTTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLLPRRNKSRLP*GLSLRPQPPSK Trigger: TTTAGAAGGGGGCTGTGGTCTGAGGGACAGTCCTCATGGCAGCCTCGACTTATTTCTCCTGGGTAATAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTTTTCTTACACAGGCTTCACCCACCATaGCTTCAGACTGTCCACTGCTCTCTGCTCCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVFLHRLHPP*LQTVHCSLLQL Trigger: AAGTTGGAGCAGAGAGCAGTGGACAGTCTGAAGGCATGGTGGGTGAAGCCTGTGTAAGAAAACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | AACCAGAAATCGATCGTTTTGCAGATGGTAACTCTCTaGTCAGGCAGGGAAATGCCCCCAGAGCACAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NQKSIVLQMVTL*SGREMPPEHSF Trigger: AAAGCTGTGCTCTGGGGGCATTTCCCTGCCTGAGCAGAGAGTTACCATCTGCAAAACGATCGATTTCTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | GCCATGGCTAGTCAGATGGGCAAGCCATTTTGTGGCTaGCAAACACCTCAGAAATGCCTCTCTGTCTTATAC | + |
|
Preference number: 3 (lower is better) Translates to: AMASQMGKPFCG*QTPQKCLSVLY Trigger: GTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATGGCTTGCCCATCTGACTAGCCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | TATCTGAACTTGTTGAGCTGCCAGAGAAGCAACAGGTaGGCCTCTTCCTTTGGAAACCATCCCAGGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YLNLLSCQRSNR*ASSFGNHPRKE Trigger: CTCTTTCCTGGGATGGTTTCCAAAGGAAGAGGCTCACCTGTTGCTTCTCTGGCAGCTCAACAAGTTCAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | AGCATCACACGGATGGCAGGACGTTTCTCCTTTGTTTaGGTAGTAGTTGGCTGGACAAAGCTTGCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SITRMAGRFSFV*VVVGWTKLAER Trigger: CCTTTCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACAAAGGAGAAACGTCCTGCCATCCGTGTGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | AAGAAGACTATGTCCGGAATTCCCGAGGTCTCTGGGTaGAAAAGTTCAACTGGGGAGACGATTCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KKTMSGIPEVSG*KSSTGETIPSK Trigger: CTTGGAAGGAATCGTCTCCCCAGTTGAACTTTTTCACCCAGAGACCTCGGGAATTCCGGACATAGTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTaGGAGTTGGTACCTAATCTACTTTTCAGAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VKGRWEEESHST*ELVPNLLFRGV Trigger: CACCCCTCTGAAAAGTAGATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | CATTATCTCCTGAGCCAACTCTCTGGCCCTAAAGTTTaGGCAGACTACCACAGTCCTGGCTCAAAGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HYLLSQLSGPKV*ADYHSPGSKTK Trigger: TTTAGTCTTTGAGCCAGGACTGTGGTAGTCTGCGCAAACTTTAGGGCCAGAGAGTTGGCTCAGGAGATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | CGGGCTTGGACACTTTGGACCACACCGAGAAAGCTGTaGTTCTCCAATAGAGGACGTTATTGCCTCTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: RAWTLWTTPRKL*FSNRGRYCLYL Trigger: TAAATAGAGGCAATAACGTCCTCTATTGGAGAACCACAGCTTTCTCGGTGTGGTCCAAAGTGTCCAAGCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR TCA 72 bp | GATGGCCAAAAGTCATGGCGTAGCTTCACTTCTTTCTaGTTCTTAGAAGCCATCATGAGAGCAGCCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGQKSWRSFTSF*FLEAIMRAAMA Trigger: AGCCATGGCTGCTCTCATGATGGCTTCTAAGAATCAGAAAGAAGTGAAGCTACGCCATGACTTTTGGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | TGGTACAACCAGAGTGAGAATCATGAAGTCGTTGTCTaGGGCACCAACAGCTGTATAAATGTGGTCACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WYNQSENHEVVV*GTNSCINVVTS Trigger: GCTGGTGACCACATTTATACAGCTGTTGGTGCCTCAGACAACGACTTCATGATTCTCACTCTGGTTGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR GCA 72 bp | TTAAAGACAGAAACAGATATGACCATAGCTGGTCCATaGCACAGTGGGCTGGAGTCTAATACTGCCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LKTETDMTIAGP*HSGLESNTAPS Trigger: TGATGGGGCAGTATTAGACTCCAGCCCACTGTGGCATGGACCAGCTATGGTCATATCTGTTTCTGTCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | AGTGGGCTGGAGTCTAATACTGCCCCATCAAACCTTTaGCCCCCTGTGTTCTTTCTAAATAAGATGCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SGLESNTAPSNL*PPVFFLNKMLH Trigger: ATGGAGCATCTTATTTAGAAAGAACACAGGGGGCCAAAGGTTTGATGGGGCAGTATTAGACTCCAGCCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | CCGAGAAAGCTGTGGTTCTCCAATAGAGGACGTTATTaGCTCTATTTAGCTCAACACTGTGGAATTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: PRKLWFSNRGRY*LYLAQHCGIPI Trigger: GATGGGAATTCCACAGTGTTGAGCTAAATAGAGGCAATAACGTCCTCTATTGGAGAACCACAGCTTTCTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCCATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCATGGAGGATAGATCTATaGGACTTTGGGCAAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QAILWLTNTSEMPLCLIPWRIDL*DFGQVL Trigger: AAGAACTTGCCCAAAGTCCAATAGATCTATCCTCCA...TGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATGGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR TCA 72 bp | ATGCTTGGGAGGAAGGACATTCAATTCCAGGATGTCTaGATAAAGAAGTCCAAAGAGATAGACTTTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MLGRKDIQFQDV*IKKSKEIDFPP Trigger: TGGGGGAAAGTCTATCTCTTTGGACTTCTTTATTCAGACATCCTGGAATTGAATGTCCTTCCTCCCAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR GCA 72 bp | AAGGTAGAGGTGCAAAAAGTGCTATCATTGAATCAGTaGTGTTTGAGGATGCTTGGGAGGAAGGACATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KVEVQKVLSLNQ*CLRMLGRKDIQ Trigger: TTGAATGTCCTTCCTCCCAAGCATCCTCAAACAGCACTGATTCAATGATAGCACTTTTTGCACCTCTACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | AGTGCTATCATTGAATCAGTGCTGTTTGAGGATGCTTaGGAGGAAGGACATTCAATTCCAGGATGTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SAIIESVLFEDA*EEGHSIPGCLN Trigger: ATTCAGACATCCTGGAATTGAATGTCCTTCCTCCCAAGCATCCTCAAACAGCACTGATTCAATGATAGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | GTATTATTCTATTCTAGGTTTTCTACTGATTATAGCTaGAGTGAAAGGGAGATGGGAAGAGGAATCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VLFYSRFSTDYS*SEREMGRGIPL Trigger: GAGTGGGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAATAGAATAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CCA 72 bp | AGTGGTAGAACACTTTGCTTAACATGTGAGACACCCTaGGTTTCATCTTCAGCCCAGAAAACTAAAATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGRTLCLTCETP*VSSSAQKTKID Trigger: ATCAATTTTAGTTTTCTGGGCTGAAGATGAAACCCAGGGTGTCTCACATGTTAAGCAAAGTGTTCTACCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTGAAGCTCGGCACCCCTaGCAGAGAGACGGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPEARHP*QRDGAC Trigger: GCAGGCACCGTCTCTCTGGCAGGGGTGCCGAGCTTC...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTCATGTCTGGGCCTCCTaGAGACGTCTTCAGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPHVWAS*RRLQRH Trigger: GTGCCGCTGAAGACGTCTTCAGGAGGCCCAGACATG...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCGGCTCTTTGCAGGCGTaGAGCTCGGGTCCGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPAAGSAGLLAPKLPQACGSLQA*SSGPVP Trigger: GGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGCC...GCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGCCCGGGTTACAGGGTaGGCAGCGGGTCTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: AAGSAGLLAPKLPQACRVARVTG*AAGLHT Trigger: GGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGC...TACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTAGGCTGGCAAAGCCGTaGGGTAGCTCATCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPRLAKP*GSSSHS Trigger: TGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCT...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGGACTCTTTGCAGGCGTaGAGCTCGGGTCCGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVDSLQA*SSGPVP Trigger: GGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTC...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGAGCACTCGGTGCCCTTaGCGGGGTCTGGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRSTRCP*RGLGGW Trigger: CCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCT...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCACACAGGCCTGTaGACCGTAAGGCTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAGHTGL*TVRLVS Trigger: GCTCACCAGCCTTACGGTGCACAGGCCTGTGTGCCC...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGAGAGGCCGAGCAGAGTaGACAAGCGGCCACACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGRGRAE*TSGHTL Trigger: GAGAGTGTGGCCGCTTGTCCACTCTGCTCGGCCTCT...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTCCCGAGGTCTCTGGGTaGAAAAGTTCAACTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPPEVSG*KSSTGE Trigger: CTCCCCAGTTGAACTTTTTCACCCAGAGACCTCGGG...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCCAAATCGGATGCCAGTaGCGAGGGAGTAGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPAAGSAGLLAPKLPQACQIGCQ*RGSSGP Trigger: AGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTG...GCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGGAAGCTCGGCACCCCTaGCAGAGAGACGGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHREARHP*QRDGAC Trigger: GCAGGCACCGTCTCTCTGGCAGGGGTGCCGAGCTTC...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAAAGGGGAGCCCTGCTTaGCAGCGTATGTGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAKGSPA*QRMCQA Trigger: AGCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTT...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCACATCAGAGCACATGCTaGGTAGCCGCAGGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAHQSTC*VAAGCQ Trigger: CTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATG...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGGAGGCGGATGGTGGTTaGTCTTCCAGAACTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGEADGG*SSRTAG Trigger: TCCTGCAGTTCTGGAAGATCAACCACCATCCGCCTC...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCGCTCAGGCAGGGAAATaGCCCCAGAGCACAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPAAGSAGLLAPKLPQACAQAGK*PQSTAL Trigger: CAAAGCTGTGCTCTGGGGGCATTTCCCTGCCTGAGC...GCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAAAGGGGAGCCCTGCTTaGCAGCGTATGTGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPQACRVVCPGEEAGEAKGSPA*QRMCQA Trigger: AGCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTT...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGCTTGTCTGTGCAGGCTaGGCGCACTTTGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVLVCAG*AHFAGG Trigger: TCCACCTGCAAAGTGCGCCCAGCCTGCACAGACAAG...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCGTTCCCAGGGTCACCTaGAAGGTGGTCCCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAVPRVT*KVVPAQ Trigger: TTGGGCTGGGACCACCTTCCAGGTGACCCTGGGAAC...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCACGTATGTGCCAGGCTTaGAGGGGAAACACTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQACRVVCPGEEAGEARMCQA*RGNTRR Trigger: CCTCCGAGTGTTTCCCCTGCAAGCCTGGCACATACG...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGGGTAGCCGCAGGGTaGCAGGAGCAGCTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAWVAAG*QEQLSL Trigger: CAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCA...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGAGCTGTGTCTCTCCCTaGGCATCACAGGCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRSCVSP*ASQAVW Trigger: CCACACAGCCTGTGATGCTCAGGGAGAGACACAGCT...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGGCCCATTTGTACATaGGCTGTGTCTCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVWPICT*AVSLPE Trigger: CTCAGGGAGAGACACAGCTCATGTACAAATGGGCCA...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTCTGAGAAGTTGTAGTTaGAAATCCTGCTGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPLRSCS*KSCWGC Trigger: ACACCCCCAGCAGGATTTTCAACTACAACTTCTCAG...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCCCCGAGGTCTCTGGGTaGAAAAGTTCAACTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAPEVSG*KSSTGE Trigger: CTCCCCAGTTGAACTTTTTCACCCAGAGACCTCGGG...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGACATCAGTGTGGCGGTaGATTCATCTGTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGTSVWR*IHLCWR Trigger: CCTCCAACACAGATGAATGCACCGCCACACTGATGT...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCATGGCTGGACAAAGCTTaGAGAAAGGGGAGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLPQACRVVCPGEEAGEAWLDKA*RKGSPA Trigger: AGCAGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCA...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGAATAGTCCTTGTCTGTaGAGGCTGGGCGCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVNSPCL*RLGALC Trigger: GCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATT...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGAGGTATAGGACTGCTTaGCTTTGGTGCCCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVRYRTA*LWCPST Trigger: CGTGGAAGGGCACCAAAGGCAAGCAGTCCTATACCT...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCAGGGCACACAGGCCTGTaGACCGTAAGGCTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPGHTGL*TVRLVS Trigger: GCTCACCAGCCTTACGGTGCACAGGCCTGTGTGCCC...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGTGGGTAGCCGCAGGGTaGCAGGAGCAGCTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRWVAAG*QEQLSL Trigger: CAATGAAAGCTGCTCCTGGCACCCTGCGGCTACCCA...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTAATTCATGCCCACCATaGAGTAGAGCTCACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPNSCPP*SRAHSS Trigger: TGAACTGTGAGCTCTACTTCATGGTGGGCATGAATT...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCCACAATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACAAATCGGATGCCAGTaGCGAGGGAGTAGCGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATMKRFPAAGSAGLLAPKQIGCQ*RGSSGP Trigger: AGGGCCGCTACTCCCTCGGCACTGGCATCCGATTTG...TTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCATTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCACATCAGTGTGGCGGTaGATTCATCTGTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAAGSAGLLAPKLPQACTSVWR*IHLCWR Trigger: CCTCCAACACAGATGAATGCACCGCCACACTGATGT...GCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGTTTCGGGAGAAGGTaGAGTCGTTGTAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVCFGRR*SRCSRE Trigger: CTCTCTGCTACAACGACTGCACCTTCTCCCGAAACA...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTTTGATCTTCCAGAACTaGAGGACTGGGTCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPLIFQN*RTGSHH Trigger: ATGATGTGACCCAGTCCTGCAGTTCTGGAAGATCAA...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCCAGATGGTAACTCTCTaGTCAGGCAGGGAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAQMVTL*SGREMP Trigger: GGGCATTTCCCTGCCTGAGCAGAGAGTTACCATCTG...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTCATCAGCACTGGGCTaGCACTGGTCATTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQASSALG*HWSFWT Trigger: TGTCCAGAATGACCAGTGCCAGCCCAGTGCTGATGA...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCACTGTTTCATGAAGGGTaGTCCTCTGGAAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLPQACRVVCPGEEAGEALFHEG*SSGRPM Trigger: CATGGGCCTTCCAGAGGACCACCCTTCATGAAACAG...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGGGATCTTGTTATTCTTaGTCCCTGGACCACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVGSCYS*SLDHRA Trigger: TGCCCTGTGGTCCAGGGACCAAGAATAACAAGATCC...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACATCAGAGCACATGCTaGGTAGCCGCAGGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPHQSTC*VAAGCQ Trigger: CTGGCACCCTGCGGCTACCCAGCATGTGCTCTGATG...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGTTGTCGGTTTTGAAGAAGCCCGGGTTACAGGGTGGGCAGCGGGTCTTGTTCCCAGGGTCACCTaGAAGGTGGTCCCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GAVVGFEEARVTGWAAGLVPRVT*KVVPAQ Trigger: TTGGGCTGGGACCACCTTCCAGGTGACCCTGGGAAC...AAGACCCGCTGCCCACCCTGTAACCCGGGCTTCTTCAAAACCGACAACAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | AGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCATTCCTGCCTGTTTCATaGAGGGTGGTCCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGLLAPKLPQACRVVCPFLPVS*RVVLWK Trigger: CTTCCAGAGGACCACCCTTCATGAAACAGGCAGGAA...TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCATCATTGGATTGCATCTaGGGCGGATGGTGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLPQACRVVCPGEEAGEASLDCI*GGWWLI Trigger: GATCAACCACCATCCGCCTCAGATGCAATCCAATGA...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTTAACGGTGCCAGACTaGTTTAGGTTGACGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVLTVPD*FRLTAY Trigger: GTATGCCGTCAACCTAAAGCAGTCTGGCACCGTTAA...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTTGATCTTCCAGAACTaGAGGACTGGGTCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGLIFQN*RTGSHH Trigger: ATGATGTGACCCAGTCCTGCAGTTCTGGAAGATCAA...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCAGATGGTAACTCTCTaGTCAGGCAGGGAAATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRQMVTL*SGREMP Trigger: GGGCATTTCCCTGCCTGAGCAGAGAGTTACCATCTG...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGACACCGAGAAAGCTGTaGTTCTCCAATAGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVTPRKL*FSNRGR Trigger: ACGTCCTCTATTGGAGAACCACAGCTTTCTCGGTGT...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTTGTTTGAGTAGTAGTTaGCTGGACAAAGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPCLSSS*LDKACR Trigger: TCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACA...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTCTCACCGCAGATTTTTaGTATGGCCCATTTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPLTADF*YGPFVH Trigger: ATGTACAAATGGGCCATACCAAAAATCTGCGGTGAG...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCCCCAGAGCACAGCTTTaGTTCTCGCCACATGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAPRAQL*FSPHVS Trigger: ACTTACATGTGGCGAGAACCAAAGCTGTGCTCTGGG...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCAGACTGCTTTAGGTTaGCGGCATACATCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRQTALG*RHTSVW Trigger: CCACACTGATGTATGCCGTCAACCTAAAGCAGTCTG...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGGTTGGTGACATTGATTaGGTAGATCTTGGCGACATC | + |
|
Preference number: 4 (lower is better) Translates to: AGSAGLLAPKLPQACRVVVGDID*VDLGDI Trigger: GATGTCGCCAAGATCTACTCAATCAATGTCACCAAC...CACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTTGGTGACATTGATTaGGTAGATCTTGGCGACATC | + |
|
Preference number: 4 (lower is better) Translates to: AAGSAGLLAPKLPQACRVVGDID*VDLGDI Trigger: GATGTCGCCAAGATCTACTCAATCAATGTCACCAAC...TACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGAGGCTGGGCGCACTTTaGAGGTGGAAGATCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRRLGAL*RWKILF Trigger: AAAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCT...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGTGTTTCGGGAGAAGGTaGAGTCGTTGTAGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRCFGRR*SRCSRE Trigger: CTCTCTGCTACAACGACTGCACCTTCTCCCGAAACA...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCATGCATTCATCTGTGTTaGAGGCGATGTAGTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGLLAPKLPQACRVVCPCIHLC*RRCSLP Trigger: GGGGAGACTACATCGCCTCCAACACAGATGAATGCA...TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCGGCATACATCAGTGTaGCGGTGCATTCATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRRHTSV*RCIHLC Trigger: ACACAGATGAATGCACCGCCACACTGATGTATGCCG...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCCAGAGCACAGCTTTaGTTCTCGCCACATGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRPRAQL*FSPHVS Trigger: ACTTACATGTGGCGAGAACCAAAGCTGTGCTCTGGG...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTCAAGCCCGGGCTGTGTaGCACGGCGACCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGQARAV*HGDPPP Trigger: AGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTG...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGAGCCTCTTCCTTTGGAAACCATCCCAGGAAAGAGTAAGGTAGAGGTGCGGGGTCTGGGAGGCTaGTGCACAAGCCCGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGEPLPLETIPGKSKVEVRGLGG*CTSPGC Trigger: ACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCG...CACCTCTACCTTACTCTTTCCTGGGATGGTTTCCAAAGGAAGAGGCTCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | TCAGTTCCTGCTGGGCAGTGGGTACAATCCGAGCCGTaGGAGTACGAGCCGTATGGGCAAGGTTCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPAGQWVQSEP*EYEPYGQGSQV Trigger: CACCTGTGAACCTTGCCCATACGGCTCGTACTCCAACGGCTCGGATTGTACCCACTGCCCAGCAGGAACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTGTCGGTCAGCAAGGCTaGCGGGCTGTGAGGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGVGQQG*RAVRTP Trigger: GGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGAC...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCATTTAGCTCAACACTGTaGAATTCCCATCCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAFSSTL*NSHPFS Trigger: GGAGAAAGGATGGGAATTCCACAGTGTTGAGCTAAA...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCATGTTTGAGTAGTAGTTaGCTGGACAAAGCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQQRGAQGCWHLNCHRPACLSSS*LDKACR Trigger: TCTGCAAGCTTTGTCCAGCCAACTACTACTCAAACA...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | TTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCGGAAGATCCTTTTTCTaGGTATTTGTCAGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPAAGSAGLLAPKLPQACGRSFF*VFVSIT Trigger: TGTGATGCTGACAAATACTCAGAAAAAGGATCTTCC...GCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGAATTCATGCCCACCATaGAGTAGAGCTCACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRNSCPP*SRAHSS Trigger: TGAACTGTGAGCTCTACTTCATGGTGGGCATGAATT...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTACACAGAGACTCAGGGTaGAATGATGAAAATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGSAGLLAPKLPQACRVHRDSG*NDENTS Trigger: TGAAGTATTTTCATCATTTCACCCTGAGTCTCTGTG...TACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CACAGGCTTCACCCACCATGCCTTCAGACTGTCCACTGCTCTCTGCTCCAACTTGAGGCGGATGGTGGTTaGTCTTCCAGAACTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRLHPPCLQTVHCSLLQLEADGG*SSRTAG Trigger: TCCTGCAGTTCTGGAAGATCAACCACCATCCGCCTC...AAGTTGGAGCAGAGAGCAGTGGACAGTCTGAAGGCATGGTGGGTGAAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GCCACAATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAATCATTGGATTGCATCTaGGGCGGATGGTGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: ATMKRFPAAGSAGLLAPKSLDCI*GGWWLI Trigger: GATCAACCACCATCCGCCTCAGATGCAATCCAATGA...TTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCATTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGTTTAGCTCAACACTGTaGAATTCCCATCCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSQQRGAQGCWHLNCHRFSSTL*NSHPFS Trigger: GGAGAAAGGATGGGAATTCCACAGTGTTGAGCTAAA...CCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCATGGAGGTCTAAATCCTaGTACAACCAGAGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGLLAPKLPQACRVVCPWRSKS*YNQSEN Trigger: ATTCTCACTCTGGTTGTACCAGGATTTAGACCTCCA...TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTCGTCCTCTCCTTCCATaGTGGCACAGCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGRPLLP*WHSCLL Trigger: CAGCAGACAGCTGTGCCATCATGGAAGGAGAGGACG...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGAGCCTCTTCCTTTGGAAACCATCCCAGGAAAGAGTAAGGTAGAGGTGGCTTGGCAGCGTATGTaGCAGGCTTGCAGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGEPLPLETIPGKSKVEVAWQRM*QACRGN Trigger: GTTTCCCCTGCAAGCCTGGCACATACGCTGCCAAGC...CACCTCTACCTTACTCTTTCCTGGGATGGTTTCCAAAGGAAGAGGCTCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CACAGGCTTCACCCACCATGCCTTCAGACTGTCCACTGCTCTCTGCTCCAACTTTGCATTCATCTGTGTTaGAGGCGATGTAGTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRLHPPCLQTVHCSLLQLCIHLC*RRCSLP Trigger: GGGGAGACTACATCGCCTCCAACACAGATGAATGCA...AAGTTGGAGCAGAGAGCAGTGGACAGTCTGAAGGCATGGTGGGTGAAGCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCCATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAGCCCTTGACGGGGTCTaGGAGGCTGGTGCACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAILWLTNTSEMPLCLIPALDGV*EAGAQA Trigger: GGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGC...TGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | GCCACCTCCCAGCCTGTCAGGCCCTTGTATTCAAAGTaGATCCCACTGAGAACCGTAGTTTCCATGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATSQPVRPLYSK*IPLRTVVSMLE Trigger: CTCCAACATGGAAACTACGGTTCTCAGTGGGATCAACTTTGAATACAAGGGCCTGACAGGCTGGGAGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTGGATCCGGAGGTCAGTaGCATTGTCTGTGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGGSGGQ*HCLCTQ Trigger: CTGTGTGCACAGACAATGTCACTGACCTCCGGATCC...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGGTCGGTCAGCAAGGCTaGCGGGCTGTGAGGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLVGQQG*RAVRTP Trigger: GGGTGTCCTCACAGCCCGTCAGCCTTGCTGACCGAC...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTAGGTCTGGGAGGCTGGTaGACAAGCCCGGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHGWTVFRKQDVSKETVGLGGW*TSPGCV Trigger: CACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACC...TACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTAGCCCGGGTTACAGGGTaGGCAGCGGGTCTTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: VSHGWTVFRKQDVSKETVARVTG*AAGLHT Trigger: GGTGTGAAGACCCGCTGCCCACCCTGTAACCCGGGC...TACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGAAGGCTGACGGGCTGTaGGGACACCCCGGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLKADGL*GHPGLV Trigger: TACAAGGCCGGGGTGTCCTCACAGCCCGTCAGCCTT...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCTCAACTGTATGTTCATGGGGCAGGCTCAGTTCCTaGTGGGCAGTGGGTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: KPFSLADLVYVFSTVCSWGRLSS*WAVGTI Trigger: GATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCC...CCATGAACATACAGTTGAGAACACATACACTAGGTCTGCAAGGGAGAACGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCCGGCGACCCTCCACCTaGAACCTGTGCTGTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KQDVSKETVHEVWVYLVGRRPST*NLCCRT Trigger: CGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCG...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | ACCCCTGTTATGGCGATGTTTCTAACAAGCACGGGCTaGGACACTTTGGACCACACCGAGAAAGCTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVMAMFLTSTG*DTLDHTEKAVV Trigger: AACCACAGCTTTCTCGGTGTGGTCCAAAGTGTCCAAGCCCGTGCTTGTTAGAAACATCGCCATAACAGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 72 bp | GTAGTTTCCATGTTGGAGGGCAGTGTGTTCCACCATTaGTACTCAAATCCCACGGCAGGCTCAGTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVSMLEGSVFHH*YSNPTAGSVPA Trigger: AGCAGGAACTGAGCCTGCCGTGGGATTTGAGTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAAAAGGCTGACGGGCTGTaGGGACACCCCGGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILGFLLIIAGVKGRWEEEKADGL*GHPGLV Trigger: TACAAGGCCGGGGTGTCCTCACAGCCCGTCAGCCTT...TTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACCATGTCTGGGCCTCCTaGAGACGTCTTCAGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHHVWAS*RRLQRH Trigger: GTGCCGCTGAAGACGTCTTCAGGAGGCCCAGACATG...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATCTGTTTCATGAAGGGTaGTCCTCTGGAAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKGRWEEESHSTCELVPNLFHEG*SSGRPM Trigger: CATGGGCCTTCCAGAGGACCACCCTTCATGAAACAG...ATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCTCAACTGTATGTTCATGGGTTATTCTTGGTCCCTaGACCACAGGGCACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPFSLADLVYVFSTVCSWVILGP*TTGHTG Trigger: GCCTGTGTGCCCTGTGGTCCAGGGACCAAGAATAAC...CCATGAACATACAGTTGAGAACACATACACTAGGTCTGCAAGGGAGAACGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | GGAAAGGCACAGGTGAAGACCATGGGCAACTCAGGCTaGACCAAGAGATGGCTATTCCGGTATGGAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKAQVKTMGNSG*TKRWLFRYGMK Trigger: TTTCATTCCATACCGGAATAGCCATCTCTTGGTCAAGCCTGAGTTGCCCATGGTCTTCACCTGTGCCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTCTGAGAAGTTGTAGTTaGAAATCCTGCTGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGLRSCS*KSCWGC Trigger: ACACCCCCAGCAGGATTTTCAACTACAACTTCTCAG...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTTTAACGGTGCCAGACTaGTTTAGGTTGACGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGLTVPD*FRLTAY Trigger: GTATGCCGTCAACCTAAAGCAGTCTGGCACCGTTAA...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | CATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACTGGCTGGACAAAGCTTaGAGAAAGGGGAGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFVADKHLRNASLSYTNHWLDKA*RKGSPA Trigger: AGCAGGGCTCCCCTTTCTGCAAGCTTTGTCCAGCCA...GTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTCTCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACTTGTCTGTGCAGGCTaGGCGCACTTTGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSHGWTVFRKQDVSKETVLVCAG*AHFAGG Trigger: TCCACCTGCAAAGTGCGCCCAGCCTGCACAGACAAG...TACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCAGAGGCCGAGCAGAGTaGACAAGCGGCCACACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQDVSKETVHEVWVYLVGRGRAE*TSGHTL Trigger: GAGAGTGTGGCCGCTTGTCCACTCTGCTCGGCCTCT...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | CGCACTTTGCAGGTGGAAGATCCTTTTTCTGAGTATTaGTCAGCATCACACGGATGGCAGGACGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQVEDPFSEY*SASHGWQDVSP Trigger: AGGAGAAACGTCCTGCCATCCGTGTGATGCTGACAAATACTCAGAAAAAGGATCTTCCACCTGCAAAGTGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| 3UTR CAA 72 bp | GCCGAGATGCCCACTTTTAACCAGAAATCGATCGTTTaGCAGATGGTAACTCTCTGCTCAGGCAGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: AEMPTFNQKSIV*QMVTLCSGREM Trigger: CATTTCCCTGCCTGAGCAGAGAGTTACCATCTGCAAAACGATCGATTTCTGGTTAAAAGTGGGCATCTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAAAGGCTGGCAAAGCCGTaGGGTAGCTCATCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGFLLIIAGVKGRWEEERLAKP*GSSSHS Trigger: TGAGTGGGATGAGCTACCTCACGGCTTTGCCAGCCT...TTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTCGTTTCTCCTTTGTTTaGGTAGTAGTTGGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSVGIFGRLEASVETGLGRFSFV*VVVGWT Trigger: TGTCCAGCCAACTACTACTCAAACAAAGGAGAAACG...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCAGCTGTGTCTCTCCCTaGGCATCACAGGCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSSCVSP*ASQAVW Trigger: CCACACAGCCTGTGATGCTCAGGGAGAGACACAGCT...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCCGTCCTCTCCTTCCATaGTGGCACAGCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSRPLLP*WHSCLL Trigger: CAGCAGACAGCTGTGCCATCATGGAAGGAGAGGACG...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACCCCACTTGGACGAAGTaGAGTTCTCAGTGGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHPTWTK*SSQWTP Trigger: CGGAGTCCACTGAGAACTGCACTTCGTCCAAGTGGG...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGCTTGGCAGCGTATGTaGCAGGCTTGCAGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLAWQRM*QACRGN Trigger: GTTTCCCCTGCAAGCCTGGCACATACGCTGCCAAGC...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGGCAGGCTCAGTTCCTaGTGGGCAGTGGGTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLGRLSS*WAVGTI Trigger: GATTGTACCCACTGCCCAGCAGGAACTGAGCCTGCC...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAAGCTCAGGCAGGGAAATaGCCCCAGAGCACAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGFLLIIAGVKGRWEEEAQAGK*PQSTAL Trigger: CAAAGCTGTGCTCTGGGGGCATTTCCCTGCCTGAGC...TTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATTCTCCACAGGAGTATTaGTCCTGGAATTCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGRWEEESHSTCELVPNSPQEY*SWNSCP Trigger: TGGGCATGAATTCCAGGACCAATACTCCTGTGGAGA...ATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCTTAGAGGGACAGAGGTaGCAGGTCCCAGAATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSLEGQR*QVPESR Trigger: CCGGGATTCTGGGACCTGCCACCTCTGTCCCTCTAA...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTCCTGGCTCAAAGACTAAAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCAATTCCCGAGGTCTCTaGGTGAAAAAGTTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLAQRLKPFSLADLVYVFNSRGL*VKKFNW Trigger: CCAGTTGAACTTTTTCACCCAGAGACCTCGGGAATT...GAACACATACACTAGGTCTGCAAGGGAGAACGGCTTTAGTCTTTGAGCCAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCGGATCCGGAGGTCAGTaGCATTGTCTGTGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KQDVSKETVHEVWVYLVGGSGGQ*HCLCTQ Trigger: CTGTGTGCACAGACAATGTCACTGACCTCCGGATCC...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | AAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCTCAACTGTATGTTCATGGCTCAAAATGGTACTCTaGCTCTTTGCAGGCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPFSLADLVYVFSTVCSWLKMVL*LFAGVK Trigger: CTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAG...CCATGAACATACAGTTGAGAACACATACACTAGGTCTGCAAGGGAGAACGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGACTCATCAAATCGGATaGCAGTGCCGAGGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLTHQIG*QCRGSS Trigger: GCTACTCCCTCGGCACTGGCATCCGATTTGATGAGT...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACAGGTATAGGACTGCTTaGCTTTGGTGCCCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHRYRTA*LWCPST Trigger: CGTGGAAGGGCACCAAAGGCAAGCAGTCCTATACCT...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTTCCACCTGGAACCTGTaGTGTCGCACGCTGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLSTWNL*CRTLCT Trigger: AGTACACAGCGTGCGACAGCACAGGTTCCAGGTGGA...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGTTAGAGGGACAGAGGTaGCAGGTCCCAGAATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRLEGQR*QVPESR Trigger: CCGGGATTCTGGGACCTGCCACCTCTGTCCCTCTAA...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCTGGCCCATTTGTACATaGGCTGTGTCTCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSWPICT*AVSLPE Trigger: CTCAGGGAGAGACACAGCTCATGTACAAATGGGCCA...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTTTCCTGCCTGTTTCATaGAGGGTGGTCCTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLFLPVS*RVVLWK Trigger: CTTCCAGAGGACCACCCTTCATGAAACAGGCAGGAA...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAAACTCATCAAATCGGATaGCAGTGCCGAGGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGFLLIIAGVKGRWEEETHQIG*QCRGSS Trigger: GCTACTCCCTCGGCACTGGCATCCGATTTGATGAGT...TTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACAGGCTGGGCGCACTTTaGAGGTGGAAGATCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHRLGAL*RWKILF Trigger: AAAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCT...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCAATAGTCCTTGTCTGTaGAGGCTGGGCGCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSNSPCL*RLGALC Trigger: GCAAAGTGCGCCCAGCCTGCACAGACAAGGACTATT...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR GCA 90 bp | AAGGGAATCCAACATGTCTTGATGAGACACAGATATGATTTCACAAAGCCAAAACCTCCGCGCAGGGCTTaGAGGACTGGTCCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: KGIQHVLMRHRYDFTKPKPPRRA*RTGPSY Trigger: ATATGAAGGACCAGTCCTGCAAGCCCTGCGCGGAGG...TTTTGGCTTTGTGAAATCATATCTGTGTCTCATCAAGACATGTTGGATTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATTGGAGGTCTAAATCCTaGTACAACCAGAGTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKGRWEEESHSTCELVPNWRSKS*YNQSEN Trigger: ATTCTCACTCTGGTTGTACCAGGATTTAGACCTCCA...ATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGGTTATTCTTGGTCCCTaGACCACAGGGCACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRVILGP*TTGHTG Trigger: GCCTGTGTGCCCTGTGGTCCAGGGACCAAGAATAAC...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACTTTTTCCTCCGTCTCTaGCAGAAGGATGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHFFLRL*QKDGGC Trigger: ACAACCCCCATCCTTCTGCCAGAGACGGAGGAAAAA...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTCAGACTGCTTTAGGTTaGCGGCATACATCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLQTALG*RHTSVW Trigger: CCACACTGATGTATGCCGTCAACCTAAAGCAGTCTG...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATCACAGAGACTCAGGGTaGAATGATGAAAATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGRWEEESHSTCELVPNHRDSG*NDENTS Trigger: TGAAGTATTTTCATCATTTCACCCTGAGTCTCTGTG...ATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGACACCGAGAAAGCTGTaGTTCTCCAATAGAGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLTPRKL*FSNRGR Trigger: ACGTCCTCTATTGGAGAACCACAGCTTTCTCGGTGT...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGTCTCCACAGGAGTATTaGTCCTGGAATTCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLSPQEY*SWNSCP Trigger: TGGGCATGAATTCCAGGACCAATACTCCTGTGGAGA...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | GGAAAGAGTAAGGTAGAGGTGCAAAAAGTGCTATCATaGAATCAGTGCTGTTTGAGGATGCTTGGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSKVEVQKVLS*NQCCLRMLGRK Trigger: CTTCCTCCCAAGCATCCTCAAACAGCACTGATTCAATGATAGCACTTTTTGCACCTCTACCTTACTCTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| 3UTR CAA 72 bp | TCAAAGTTGATCCCACTGAGAACCGTAGTTTCCATGTaGGAGGGCAGTGTGTTCCACCATTTGTACTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLIPLRTVVSM*EGSVFHHLYSN Trigger: ATTTGAGTACAAATGGTGGAACACACTGCCCTCCAACATGGAAACTACGGTTCTCAGTGGGATCAACTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACCTCACCGCAGATTTTTaGTATGGCCCATTTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: HFVADKHLRNASLSYTNHLTADF*YGPFVH Trigger: ATGTACAAATGGGCCATACCAAAAATCTGCGGTGAG...GTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGAATTCCCGAGGTCTCTaGGTGAAAAAGTTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDVSKETVHEVWVYLVGLNSRGL*VKKFNW Trigger: CCAGTTGAACTTTTTCACCCAGAGACCTCGGGAATT...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTAGGAGCAGCTTTCATTaGATTGCATCTGAGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLRSSFH*IASEAD Trigger: ATCCGCCTCAGATGCAATCCAATGAAAGCTGCTCCT...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | ATAAGAAATCCCCTGGGCCTTGGATATACCATAATCTTCATATGTATTCCCAGCAGGAGCAGCTTTCATTaGATTGCATCTGAGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRNPLGLGYTIIFICIPSRSSFH*IASEAD Trigger: ATCCGCCTCAGATGCAATCCAATGAAAGCTGCTCCT...GCTGGGAATACATATGAAGATTATGGTATATCCAAGGCCCAGGGGATTTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGTTTTTCCTCCGTCTCTaGCAGAAGGATGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRFFLRL*QKDGGC Trigger: ACAACCCCCATCCTTCTGCCAGAGACGGAGGAAAAA...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCCAGGGCTTGCAGGACTaGTCCTTCATATCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDVSKETVHEVWVYLVGQGLQD*SFISRN Trigger: ATTTCTGGATATGAAGGACCAGTCCTGCAAGCCCTG...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CCA 90 bp | AAGGGAATCCAACATGTCTTGATGAGACACAGATATGATTTCACAAAGCCAAAACGGCATACATCAGTGTaGCGGTGCATTCATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGIQHVLMRHRYDFTKPKRHTSV*RCIHLC Trigger: ACACAGATGAATGCACCGCCACACTGATGTATGCCG...TTTTGGCTTTGTGAAATCATATCTGTGTCTCATCAAGACATGTTGGATTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR TCA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACGGAAGATCCTTTTTCTaGGTATTTGTCAGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHGWTVFRKQDVSKETVHGRSFF*VFVSIT Trigger: TGTGATGCTGACAAATACTCAGAAAAAGGATCTTCC...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS CCA 90 bp | GCCCTTGACGGGGTCTGGGAGGCTGGTGCACAAGCCCGGGCTGTGTaGCACGGCGACCCTCCACCTGGAACCTGTGCTGTCGCACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALDGVWEAGAQARAV*HGDPPPGTCAVARC Trigger: ACAGCGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS CCA 90 bp | CCCGGCATTGCAAGAGAAGGAGCACTCGGTGCCCTTGACGGGGTCTaGGAGGCTGGTGCACAAGCCCGGGCTGTGTGGCACGGCGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGIAREGALGALDGV*EAGAQARAVWHGDP Trigger: AGGGTCGCCGTGCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTCCTTCTCTTGCAATGCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS CCA 90 bp | TGCAGGCGTGAAGCTCGGGTCCGGTTCCCAGGGTCACCTGGAAGGTaGTCCCAGCCCAAAGCAACAGCCACAGAAGCCGGGGTGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRREARVRFPGSPGR*SQPKATATEAGVCA Trigger: GGCGCACACCCCGGCTTCTGTGGCTGTTGCTTTGGGCTGGGACCACCTTCCAGGTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106625.10 ENSMUST00000185128.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCAGGACGGGCACCTTCATCGACCTCCAAGTaGGCCGAGAGGCTGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ACRVVCPGEEAGEAGRAPSSTSK*AERLAK Trigger: CTTTGCCAGCCTCTCGGCCAACTTGGAGGTCGATGA...AGGTGCCCGTCCTGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCAAAGGGGAGCCCTGCTaGGCAGCGTATGTGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAKGEPC*AAYVPG Trigger: GCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTTT...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS TCA 90 bp | CCAGAAATTCCCCGGCATTGCAAGAGAAGGAGCACTCGGTGCCCTTaGCGGGGTCTGGGAGGCTGGTGCACAAGCCCGGGCTGTGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEIPRHCKRRSTRCP*RGLGGWCTSPGCVA Trigger: TGCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTCCTTCTCTTGCAATGCCGGGGAATTTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGATCCTGGCCACCTCTTaGTTCTCTGTGTCTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGILATS*FSVSAT Trigger: GGTGGCAGACACAGAGAACAAAGAGGTGGCCAGGAT...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS CCA 90 bp | GGCTGGTGCACAAGCCCGGGCTGTGTGGCACGGCGACCCTCCACCTaGAACCTGTGCTGTCGCACGCTGTGTACTCAAAATGGTACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GWCTSPGCVARRPST*NLCCRTLCTQNGTL Trigger: CAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTGTGCACCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCACAGGCTGGGCGCACTTaGCAGGTGGAAGATCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAQAGRT*QVEDPF Trigger: AAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTG...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCGGAGGTCAGTGACATaGTCTGTGCACACAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGRRSVT*SVHTAI Trigger: AATGGCTGTGTGCACAGACAATGTCACTGACCTCCG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS GCA 90 bp | ATCGGATGCCAGTGCCGAGGGAGTAGCGGCCCTCCGCGCAGGGCTTaGAGGACTGGTCCTTCATATCCAGAAATTCCCCGGCATTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGCQCRGSSGPPRRA*RTGPSYPEIPRHCK Trigger: CTTGCAATGCCGGGGAATTTCTGGATATGAAGGACCAGTCCTGCAAGCCCTGCGCGGAGGGCCGCTACTCCCTCGGCACTGGCATCCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCACGGGCTTGGACACTTaGGACCACACCGAGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFPAAGSAGLLAPKLPQATGLDT*DHTEKA Trigger: AGCTTTCTCGGTGTGGTCCAAAGTGTCCAAGCCCGT...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAACCGTAGTTTCCATGTaGGAGGGCAGTGTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSAGLLAPKLPQACRVTVVSM*EGSVFH Trigger: GTGGAACACACTGCCCTCCAACATGGAAACTACGGT...TACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGTCTCCACAGGAGTATaGGTCCTGGAATTCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAVSTGV*VLEFMP Trigger: GGGCATGAATTCCAGGACCAATACTCCTGTGGAGAC...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCCTCACCGCAGATTTTaGGTATGGCCCATTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGPHRRF*VWPICT Trigger: TGTACAAATGGGCCATACCAAAAATCTGCGGTGAGG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAAGAAATTCCCCGGCATaGCAAGAGAAGGCTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPARNSPA*QEKALC Trigger: GCAAAGAGCCTTCTCTTGCAATGCCGGGGAATTTCT...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
||
| CDS GCA 90 bp | ACAAGCCCGGGCTGTGTGGCACGGCGACCCTCCACCTGGAACCTGTaGTGTCGCACGCTGTGTACTCAAAATGGTACTCTGACTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPGCVARRPSTWNL*CRTLCTQNGTLTLC Trigger: GCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGCCTTTTTCTGAGTATTaGTCAGCATCACACGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QQRGAQGCWHLNCHRPAGPFSEY*SASHGW Trigger: CCATCCGTGTGATGCTGACAAATACTCAGAAAAAGG...CCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCCAGCCTGTCAGGCCCTaGTATTCAAAGTTGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RFPAAGSAGLLAPKLPQAQPVRP*YSKLIP Trigger: TGGGATCAACTTTGAATACAAGGGCCTGACAGGCTG...GGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAAGAATCATGAAGTCGTaGTCTGAGGCACCAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPARIMKS*SEAPTA Trigger: AGCTGTTGGTGCCTCAGACAACGACTTCATGATTCT...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCATGGATCTTGTTATTCTaGGTCCCTGGACCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAGLLAPKLPQACRVVCPWILLF*VPGPQG Trigger: GCCCTGTGGTCCAGGGACCAAGAATAACAAGATCCA...TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTACCATCAGGAGTCCTCTaGGAGGTAAAGGATTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSAGLLAPKLPQACRVPSGVL*EVKDLI Trigger: GATCAAATCCTTTACCTCCAAGAGGACTCCTGATGG...TACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS TCA 90 bp | TCGCACGCTGTGTACTCAAAATGGTACTCTGACTCTTTGCAGGCGTaGAGCTCGGGTCCGGTTCCCAGGGTCACCTGGAAGGTGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHAVYSKWYSDSLQA*SSGPVPRVTWKVVP Trigger: TGGGACCACCTTCCAGGTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS TCA 90 bp | CCTGGAACCTGTGCTGTCGCACGCTGTGTACTCAAAATGGTACTCTaGCTCTTTGCAGGCGTGAAGCTCGGGTCCGGTTCCCAGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGTCAVARCVLKMVL*LFAGVKLGSGSQGH Trigger: GTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACAGGTTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS GCA 90 bp | CTGTGCTGTCGCACGCTGTGTACTCAAAATGGTACTCTGACTCTTTaGAGGCGTGAAGCTCGGGTCCGGTTCCCAGGGTCACCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCCRTLCTQNGTLTL*RREARVRFPGSPGR Trigger: CCTTCCAGGTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCAGGGTAGTGTGCCCACCAGACTGCTTTAGGTaGACGGCATACATCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGLLAPKLPQACRVVCPPDCFR*TAYISV Trigger: CACACTGATGTATGCCGTCAACCTAAAGCAGTCTGG...TGGGCACACTACCCTGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GCCACAATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAAACGGGCTTGGACACTTaGGACCACACCGAGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATMKRFPAAGSAGLLAPKTGLDT*DHTEKA Trigger: AGCTTTCTCGGTGTGGTCCAAAGTGTCCAAGCCCGT...TTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCATTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCACCCTTGTATTCAAAGTaGATCCCACTGAGAACCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAPLYSK*IPLRTV Trigger: TACGGTTCTCAGTGGGATCAACTTTGAATACAAGGG...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACAGGCCTGCACCAAAGAGGGACTTCTaGCTGGTAAAGATGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQQRGAQGCWHLNCHRPAPKRDF*LVKMKS Trigger: TGACTTCATCTTTACCAGCAAGAAGTCCCTCTTTGG...TGCAGGCCTGTGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GACTGTCCACTGCTCTCTGCTCCAACTTATTACCCAGGAGAAATAAGTCGAGGCGAGCACTCGGTGCCCTaGACGGGGTCTGGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DCPLLSAPTYYPGEISRGEHSVP*TGSGRL Trigger: CAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTC...GCCTCGACTTATTTCTCCTGGGTAATAAGTTGGAGCAGAGAGCAGTGGACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCATGGATCTTGTTATTCTaGGTCCCTGGACCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPWILLF*VPGPQG Trigger: GCCCTGTGGTCCAGGGACCAAGAATAACAAGATCCA...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AAACTGCCACAGGCCTGCAGGGTAGTGTGCCCAGGTGAGGAGGCAGGCGAGGCATTGGAGGTAAAGGATTaGATCTTCCCAAAGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLPQACRVVCPGEEAGEALEVKD*IFPKRD Trigger: GTCCCTCTTTGGGAAGATCAAATCCTTTACCTCCAA...TGCCTCGCCTGCCTCCTCACCTGGGCACACTACCCTGCAGGCCTGTGGCAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GACTGTCCACTGCTCTCTGCTCCAACTTATTACCCAGGAGAAATAAGTCGAGGCCCCTCCGCGCAGGGCTaGCAGGACTGGTCCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: DCPLLSAPTYYPGEISRGPSAQG*QDWSFI Trigger: TATGAAGGACCAGTCCTGCAAGCCCTGCGCGGAGGG...GCCTCGACTTATTTCTCCTGGGTAATAAGTTGGAGCAGAGAGCAGTGGACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCAAGAATCATGAAGTCGTaGTCTGAGGCACCAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPRIMKS*SEAPTA Trigger: AGCTGTTGGTGCCTCAGACAACGACTTCATGATTCT...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAGATTCCCAGCAGCGGGGAGCGCAGGGTTGCTGGCACCTAAACTGCCACCTTTTTCTGAGTATTaGTCAGCATCACACGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: MKRFPAAGSAGLLAPKLPPFSEY*SASHGW Trigger: CCATCCGTGTGATGCTGACAAATACTCAGAAAAAGG...TGGCAGTTTAGGTGCCAGCAACCCTGCGCTCCCCGCTGCTGGGAATCTCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTCCCCAGAGCACAGCTTaGGTTCTCGCCACATGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSVGIFGRLEASVETGLGPQSTA*VLATCK Trigger: CTTACATGTGGCGAGAACCAAAGCTGTGCTCTGGGG...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTTCACCCACCATGCCTTCAGACTGTCCACTGCTCTCTGCTCCAACTTCCATCAGGAGTCCTCTaGGAGGTAAAGGATTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: HRLHPPCLQTVHCSLLQLPSGVL*EVKDLI Trigger: GATCAAATCCTTTACCTCCAAGAGGACTCCTGATGG...AAGTTGGAGCAGAGAGCAGTGGACAGTCTGAAGGCATGGTGGGTGAAGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GACTGTCCACTGCTCTCTGCTCCAACTTATTACCCAGGAGAAATAAGTCGAGGCCGGAGGTCAGTGACATaGTCTGTGCACACAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: DCPLLSAPTYYPGEISRGRRSVT*SVHTAI Trigger: AATGGCTGTGTGCACAGACAATGTCACTGACCTCCG...GCCTCGACTTATTTCTCCTGGGTAATAAGTTGGAGCAGAGAGCAGTGGACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGGGAGATGGGAAGAGGAATCCCACTCTACTTGCGAGTTGGTACCTAATACCGTAGTTTCCATGTaGGAGGGCAGTGTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKGRWEEESHSTCELVPNTVVSM*EGSVFH Trigger: GTGGAACACACTGCCCTCCAACATGGAAACTACGGT...ATTAGGTACCAACTCGCAAGTAGAGTGGGATTCCTCTTCCCATCTCCCTTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
||
| CDS-3UTR CAA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGAAAGGGGAGCCCTGCTaGGCAGCGTATGTGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRKGEPC*AAYVPG Trigger: GCCTGGCACATACGCTGCCAAGCAGGGCTCCCCTTT...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CGAAGTGTGGGTATATTTGGTAGGCTTGAGGCAAGCGTAGAGACAGGTTTGGGTAGTGTGTTCCACCATTaGTACTCAAATCCCACGGCA | + |
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Preference number: 5 (lower is better) Translates to: RSVGIFGRLEASVETGLGSVFHH*YSNPTA Trigger: TGCCGTGGGATTTGAGTACAAATGGTGGAACACACT...ACCCAAACCTGTCTCTACGCTTGCCTCAAGCCTACCAAATATACCCACACTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | AAGCCGTTCTCCCTTGCAGACCTAGTGTATGTGTTCTCAACTGTATGTTCATGGAGAAATTCCCCGGCATaGCAAGAGAAGGAGCACTCG | + |
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Preference number: 5 (lower is better) Translates to: KPFSLADLVYVFSTVCSWRNSPA*QEKEHS Trigger: CGAGTGCTCCTTCTCTTGCAATGCCGGGGAATTTCT...CCATGAACATACAGTTGAGAACACATACACTAGGTCTGCAAGGGAGAACGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTCAGGCTGGGCGCACTTaGCAGGTGGAAGATCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLQAGRT*QVEDPF Trigger: AAAAGGATCTTCCACCTGCAAAGTGCGCCCAGCCTG...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACCAGCCTGTCAGGCCCTaGTATTCAAAGTTGATCCCA | + |
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Preference number: 5 (lower is better) Translates to: HFVADKHLRNASLSYTNHQPVRP*YSKLIP Trigger: TGGGATCAACTTTGAATACAAGGGCCTGACAGGCTG...GTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | AAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCATCCTGGCCACCTCTTaGTTCTCTGTGTCTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: KQDVSKETVHEVWVYLVGILATS*FSVSAT Trigger: GGTGGCAGACACAGAGAACAAAGAGGTGGCCAGGAT...GCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAATCCCCTCACCGCAGATTTTaGGTATGGCCCATTTGTACA | + |
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Preference number: 5 (lower is better) Translates to: LGFLLIIAGVKGRWEEESPHRRF*VWPICT Trigger: TGTACAAATGGGCCATACCAAAAATCTGCGGTGAGG...GGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCAACCACAGTGTGTTCCACCATTaGTACTCAAATCCCACGGCA | + |
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Preference number: 5 (lower is better) Translates to: HFVADKHLRNASLSYTNHSVFHH*YSNPTA Trigger: TGCCGTGGGATTTGAGTACAAATGGTGGAACACACT...GTGGTTGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCCCCAGAGCACAGCTTaGGTTCTCGCCACATGTAAG | + |
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Preference number: 5 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRPQSTA*VLATCK Trigger: CTTACATGTGGCGAGAACCAAAGCTGTGCTCTGGGG...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | ACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTCCAGACTGCTTTAGGTaGACGGCATACATCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: TRCKQGNSTRSVGIFGRLPDCFR*TAYISV Trigger: CACACTGATGTATGCCGTCAACCTAAAGCAGTCTGG...AAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CTAGGTTTTCTACTGATTATAGCTGGAGTGAAAGGGAGATGGGAAGAGGAATCCACGTTTCTCCTTTGTTaGAGTAGTAGTTGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LGFLLIIAGVKGRWEEESTFLLC*SSSWLD Trigger: GTCCAGCCAACTACTACTCAAACAAAGGAGAAACGT...GGATTCCTCTTCCCATCTCCCTTTCACTCCAGCTATAATCAGTAGAAAACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | AAAACAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGGTCTCCACAGGAGTATaGGTCCTGGAATTCATGCCC | + |
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Preference number: 5 (lower is better) Translates to: KTRCKQGNSTRSVGIFGRVSTGV*VLEFMP Trigger: GGGCATGAATTCCAGGACCAATACTCCTGTGGAGAC...CCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | ATAGAGATTAGACATTATCTCCTGAGCCAACTCTCTGGCCCTAAAGTTTGCGCACCAAAGAGGGACTTCTaGCTGGTAAAGATGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: IEIRHYLLSQLSGPKVCAPKRDF*LVKMKS Trigger: TGACTTCATCTTTACCAGCAAGAAGTCCCTCTTTGG...TGCGCAAACTTTAGGGCCAGAGAGTTGGCTCAGGAGATAATGTCTAATCTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CAAGCCATTTTGTGGCTGACAAACACCTCAGAAATGCCTCTCTGTCTTATACCATTGGAGGTAAAGGATTaGATCTTCCCAAAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: QAILWLTNTSEMPLCLIPLEVKD*IFPKRD Trigger: GTCCCTCTTTGGGAAGATCAAATCCTTTACCTCCAA...TGGTATAAGACAGAGAGGCATTTCTGAGGTGTTTGTCAGCCACAAAATGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | TCCCATGGGTGGACTGTGTTTAGAAAACAAGATGTAAGCAAGGAAACAGTACACACGTTTCTCCTTTGTTaGAGTAGTAGTTGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SHGWTVFRKQDVSKETVHTFLLC*SSSWLD Trigger: GTCCAGCCAACTACTACTCAAACAAAGGAGAAACGT...GTGTACTGTTTCCTTGCTTACATCTTGTTTTCTAAACACAGTCCACCCATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS-3UTR CAA 90 bp | CAAGATGTAAGCAAGGAAACAGTACACGAAGTGTGGGTATATTTGGTAGGCTTGCCCTTGTATTCAAAGTaGATCCCACTGAGAACCGTA | + |
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Preference number: 5 (lower is better) Translates to: QDVSKETVHEVWVYLVGLPLYSK*IPLRTV Trigger: TACGGTTCTCAGTGGGATCAACTTTGAATACAAGGG...CAAGCCTACCAAATATACCCACACTTCGTGTACTGTTTCCTTGCTTACATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048012.13 ENSMUST00000106625.10 |
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| CDS CCA 72 bp | GGGGTCTGGGAGGCTGGTGCACAAGCCCGGGCTGTGTaGCACGGCGACCCTCCACCTGGAACCTGTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GVWEAGAQARAV*HGDPPPGTCAV Trigger: GACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS TCA 72 bp | CCCCGGCATTGCAAGAGAAGGAGCACTCGGTGCCCTTaGCGGGGTCTGGGAGGCTGGTGCACAAGCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PRHCKRRSTRCP*RGLGGWCTSPG Trigger: GCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTCCTTCTCTTGCAATGCCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS CCA 72 bp | GCAAGAGAAGGAGCACTCGGTGCCCTTGACGGGGTCTaGGAGGCTGGTGCACAAGCCCGGGCTGTGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AREGALGALDGV*EAGAQARAVWH Trigger: GTGCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTCCTTCTCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS GCA 72 bp | CAGTGCCGAGGGAGTAGCGGCCCTCCGCGCAGGGCTTaGAGGACTGGTCCTTCATATCCAGAAATTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: QCRGSSGPPRRA*RTGPSYPEIPR Trigger: CCGGGGAATTTCTGGATATGAAGGACCAGTCCTGCAAGCCCTGCGCGGAGGGCCGCTACTCCCTCGGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS CAA 90 bp | TCCAGAAATTCCCCGGCATTGCAAGAGAAGGAGCACTCGGTGCCCTaGACGGGGTCTGGGAGGCTGGTGCACAAGCCCGGGCTGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRNSPALQEKEHSVP*TGSGRLVHKPGLCG Trigger: GCCACACAGCCCGGGCTTGTGCACCAGCCTCCCAGACCCCGTCAAGGGCACCGAGTGCTCCTTCTCTTGCAATGCCGGGGAATTTCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS TCA 72 bp | TTCCCCGGCATTGCAAGAGAAGGCTCTTTGCAGGCGTaGAGCTCGGGTCCGGTTCCCAGGGTCACCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPGIAREGSLQA*SSGPVPRVTWK Trigger: CTTCCAGGTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGCCTTCTCTTGCAATGCCGGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| CDS CCA 72 bp | ACAAGCCCGGGCTGTGTGGCACGGCGACCCTCCACCTaGAACCTGTGCTGTCGCACGCTGTGTACTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: TSPGCVARRPST*NLCCRTLCTQN Trigger: ATTTTGAGTACACAGCGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCCCGGGCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS GCA 72 bp | GGCTGTGTGGCACGGCGACCCTCCACCTGGAACCTGTaGTGTCGCACGCTGTGTACTCAAAATGGTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: GCVARRPSTWNL*CRTLCTQNGTL Trigger: CAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACAGGTTCCAGGTGGAGGGTCGCCGTGCCACACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS GCA 72 bp | TCCAGAAATTCCCCGGCATTGCAAGAGAAGGCTCTTTaGAGGCGTGAAGCTCGGGTCCGGTTCCCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SRNSPALQEKAL*RREARVRFPGS Trigger: TGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGCCTTCTCTTGCAATGCCGGGGAATTTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185128.8 |
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| CDS GCA 72 bp | CGCACGCTGTGTACTCAAAATGGTACTCTGACTCTTTaGAGGCGTGAAGCTCGGGTCCGGTTCCCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RTLCTQNGTLTL*RREARVRFPGS Trigger: TGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS TCA 72 bp | GTGTACTCAAAATGGTACTCTGACTCTTTGCAGGCGTaGAGCTCGGGTCCGGTTCCCAGGGTCACCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VYSKWYSDSLQA*SSGPVPRVTWK Trigger: CTTCCAGGTGACCCTGGGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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| CDS TCA 72 bp | TGTGCTGTCGCACGCTGTGTACTCAAAATGGTACTCTaGCTCTTTGCAGGCGTGAAGCTCGGGTCCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CAVARCVLKMVL*LFAGVKLGSGS Trigger: GGAACCGGACCCGAGCTTCACGCCTGCAAAGAGTCAGAGTACCATTTTGAGTACACAGCGTGCGACAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106625.10 |
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