RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELANE (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020125

Ensembl transcript IDs: ENSMUST00000046091.7

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TTACAGACCAAGGGTCCGCCAGAGTCCCCGAAGCAGATGCCTGCCTaGCGACGTGGCACCAGAGTGCATACGTTCACACGACGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: LQTKGPPESPKQMPA*RRGTRVHTFTRRRH
Trigger: GTGCCGCCGTCGTGTGAACGTATGCACTCTGGTGCCACGTCGGCAGGCAGGCATCTGCTTCGGGGACTCTGGCGGACCCTTGGTCTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 90 bp CAAAGCCATTCTCGAAGATCCGCTGCACAGAGAAGGTCTGTCGAGTaGGCTCCTGTCGCCGCAGGTCATGGGCTCCCAGCACTACCTGCA +
Preference number: 5 (lower is better)
Translates to: QSHSRRSAAQRRSVE*APVAAGHGLPALPA
Trigger: TGCAGGTAGTGCTGGGAGCCCATGACCTGCGGCGACAGGAGCGCACTCGACAGACCTTCTCTGTGCAGCGGATCTTCGAGAATGGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 90 bp TGCACAGAGAAGGTCTGTCGAGTGCGCTCCTGTCGCCGCAGGTCATaGGCTCCCAGCACTACCTGCACTGACCGGAAATTTAGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: CTEKVCRVRSCRRRS*APSTTCTDRKFRPF
Trigger: GAACGGCCTAAATTTCCGGTCAGTGCAGGTAGTGCTGGGAGCCCATGACCTGCGGCGACAGGAGCGCACTCGACAGACCTTCTCTGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS TCA 90 bp GCTGACATGACGAAGTTCCTGGCAATGAGGGTGGCACCACAGAAATaGCCTCCACGCCTCTGCAGGGATGCCATGAAGGGCCAAGCATGG +
Preference number: 5 (lower is better)
Translates to: ADMTKFLAMRVAPQK*PPRLCRDAMKGQAW
Trigger: CCATGCTTGGCCCTTCATGGCATCCCTGCAGAGGCGTGGAGGTCATTTCTGTGGTGCCACCCTCATTGCCAGGAACTTCGTCATGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 90 bp CCCAGCACTACCTGCACTGACCGGAAATTTAGGCCGTTCACACAGTaGGCTGCTGACATGACGAAGTTCCTGGCAATGAGGGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: PSTTCTDRKFRPFTQ*AADMTKFLAMRVAP
Trigger: TGGTGCCACCCTCATTGCCAGGAACTTCGTCATGTCAGCAGCCCACTGTGTGAACGGCCTAAATTTCCGGTCAGTGCAGGTAGTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS TCA 90 bp GGGCGAAGGCATCTGGGTACAATCCAGATCCACAGCCTCCTCGGATaGAGGAGTCAATGCCTTGGACAAGGTTGTTACAGACCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: GRRHLGTIQIHSLLG*RSQCLGQGCYRPRV
Trigger: GACCCTTGGTCTGTAACAACCTTGTCCAAGGCATTGACTCCTTCATCCGAGGAGGCTGTGGATCTGGATTGTACCCAGATGCCTTCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 90 bp TGGGCCACCTGCACGTTGGCGTTAATGGTAGCGGAGCCATTGAGCTaGATAATCACAATGTCGTTCAGCAGTTGTGATGGGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: WATCTLALMVAEPLS*IITMSFSSCDGSKP
Trigger: TGGCTTTGACCCATCACAACTGCTGAACGACATTGTGATTATCCAGCTCAATGGCTCCGCTACCATTAACGCCAACGTGCAGGTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 90 bp GGAATTGATCCAATCTGCAAACTCAGCCACAGGGGCGAAGGCATCTaGGTACAATCCAGATCCACAGCCTCCTCGGATGAAGGAGTCAAT +
Preference number: 5 (lower is better)
Translates to: GIDPICKLSHRGEGI*VQSRSTASSDEGVN
Trigger: ATTGACTCCTTCATCCGAGGAGGCTGTGGATCTGGATTGTACCCAGATGCCTTCGCCCCTGTGGCTGAGTTTGCAGATTGGATCAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 90 bp AAGAAGGTGGTCATTATGGCTTCGGATAATGGAATTGATCCAATCTaGAAACTCAGCCACAGGGGCGAAGGCATCTGGGTACAATCCAGA +
Preference number: 5 (lower is better)
Translates to: KKVVIMASDNGIDPI*KLSHRGEGIWVQSR
Trigger: TCTGGATTGTACCCAGATGCCTTCGCCCCTGTGGCTGAGTTTGCAGATTGGATCAATTCCATTATCCGAAGCCATAATGACCACCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS TCA 72 bp CACAGAAATGACCTCCACGCCTCTGCAGGGATGCCATaGAGGGCCAAGCATGGGGCCGGGCCGGCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: HRNDLHASAGMP*RAKHGAGPAGH
Trigger: GTGGCCGGCCGGCCCGGCCCCATGCTTGGCCCTTCATGGCATCCCTGCAGAGGCGTGGAGGTCATTTCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 72 bp TCTCGAAGATCCGCTGCACAGAGAAGGTCTGTCGAGTaGGCTCCTGTCGCCGCAGGTCATGGGCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: SRRSAAQRRSVE*APVAAGHGLPA
Trigger: TGCTGGGAGCCCATGACCTGCGGCGACAGGAGCGCACTCGACAGACCTTCTCTGTGCAGCGGATCTTCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 72 bp AAGGGTCCGCCAGAGTCCCCGAAGCAGATGCCTGCCTaGCGACGTGGCACCAGAGTGCATACGTTCACACGA +
Preference number: 6 (lower is better)
Translates to: KGPPESPKQMPA*RRGTRVHTFTR
Trigger: TCGTGTGAACGTATGCACTCTGGTGCCACGTCGGCAGGCAGGCATCTGCTTCGGGGACTCTGGCGGACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 72 bp TACAGACCAAGGGTCCGCCAGAGTCCCCGAAGCAGATaGCTGCCTGCCGACGTGGCACCAGAGTGCATACGT +
Preference number: 6 (lower is better)
Translates to: YRPRVRQSPRSR*LPADVAPECIR
Trigger: ACGTATGCACTCTGGTGCCACGTCGGCAGGCAGGCATCTGCTTCGGGGACTCTGGCGGACCCTTGGTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 72 bp CCAGTGCTGGGCCACCCAGGAACAATGCCAGTAGCATaGCAGCCAGAGTCCGGCTGGATAGTCTGCCAAGGG +
Preference number: 6 (lower is better)
Translates to: PVLGHPGTMPVA*QPESGWIVCQG
Trigger: CCCTTGGCAGACTATCCAGCCGGACTCTGGCTGCCATGCTACTGGCATTGTTCCTGGGTGGCCCAGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 72 bp TCCTGTCGCCGCAGGTCATGGGCTCCCAGCACTACCTaGACTGACCGGAAATTTAGGCCGTTCACACAGTGG +
Preference number: 6 (lower is better)
Translates to: SCRRRSWAPSTT*TDRKFRPFTQW
Trigger: CCACTGTGTGAACGGCCTAAATTTCCGGTCAGTGCAGGTAGTGCTGGGAGCCCATGACCTGCGGCGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 72 bp AAGGTCTGTCGAGTGCGCTCCTGTCGCCGCAGGTCATaGGCTCCCAGCACTACCTGCACTGACCGGAAATTT +
Preference number: 6 (lower is better)
Translates to: KVCRVRSCRRRS*APSTTCTDRKF
Trigger: AAATTTCCGGTCAGTGCAGGTAGTGCTGGGAGCCCATGACCTGCGGCGACAGGAGCGCACTCGACAGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS TCA 72 bp ACGAAGTTCCTGGCAATGAGGGTGGCACCACAGAAATaGCCTCCACGCCTCTGCAGGGATGCCATGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TKFLAMRVAPQK*PPRLCRDAMKG
Trigger: GCCCTTCATGGCATCCCTGCAGAGGCGTGGAGGTCATTTCTGTGGTGCCACCCTCATTGCCAGGAACTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CAA 90 bp GGCAGCTGGGCCACCTGCACGTTGGCGTTAATGGTAGCGGAGCCATaGAGCTGGATAATCACAATGTCGTTCAGCAGTTGTGATGGGTCA +
Preference number: 6 (lower is better)
Translates to: GSWATCTLALMVAEP*SWIITMSFSSCDGS
Trigger: TGACCCATCACAACTGCTGAACGACATTGTGATTATCCAGCTCAATGGCTCCGCTACCATTAACGCCAACGTGCAGGTGGCCCAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS CCA 72 bp TGCACGTTGGCGTTAATGGTAGCGGAGCCATTGAGCTaGATAATCACAATGTCGTTCAGCAGTTGTGATGGG +
Preference number: 6 (lower is better)
Translates to: CTLALMVAEPLS*IITMSFSSCDG
Trigger: CCCATCACAACTGCTGAACGACATTGTGATTATCCAGCTCAATGGCTCCGCTACCATTAACGCCAACGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7
CDS GCA 72 bp GTCATTATGGCTTCGGATAATGGAATTGATCCAATCTaGAAACTCAGCCACAGGGGCGAAGGCATCTGGGTA +
Preference number: 6 (lower is better)
Translates to: VIMASDNGIDPI*KLSHRGEGIWV
Trigger: TACCCAGATGCCTTCGCCCCTGTGGCTGAGTTTGCAGATTGGATCAATTCCATTATCCGAAGCCATAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046091.7