Pregenerated sensors for ELAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036941Ensembl transcript IDs: ENSMUST00000041138.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTaGTTGGAGCTTGGGGCCAGTTTGGGCTGCACGGCGAGACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: ADYKCMFISPAPEQE*LELGASLGCTARPC Trigger: ACAAGGTCTCGCCGTGCAGCCCAAACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR GCA 90 bp | GGCACTGAGTCAGTCATAAAGGGGAACAGACACAGACAAGAGCTCTaGCCCGGTGTGGCTTACAGAGCTGCTGTGGAGGAGAAACATCAC | + |
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Preference number: 1 (lower is better) Translates to: GTESVIKGNRHRQEL*PGVAYRAAVEEKHH Trigger: GTGATGTTTCTCCTCCACAGCAGCTCTGTAAGCCACACCGGGGCAGAGCTCTTGTCTGTGTCTGTTCCCCTTTATGACTGACTCAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CCA 90 bp | TGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTGCCCAGAGTGTaGAATTCTCTCTGTAGCAGCAGCCACAGAGTAAGTCCCTGCACA | + |
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Preference number: 1 (lower is better) Translates to: WQLSSAKLSLTLPRV*NSLCSSSHRVSPCT Trigger: TGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAGAGAATTCCACACTCTGGGCAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR TCA 90 bp | TTACAGAGCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATaGAGCTGTGACCGACAAGTATCAAAAAGACGGGTTGACGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LQSCCGGETSHTEAK*SCDRQVSKRRVDGL Trigger: CAGCCCGTCAACCCGTCTTTTTGATACTTGTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGCTCTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CCA 90 bp | CGTTTTCTAGCCAAGAGGACCCAGTCTTATATACTTTGCCAACAATaGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTGCCCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: RFLAKRTQSYILCQQ*QLSSAKLSLTLPRV Trigger: CACTCTGGGCAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTGGGTCCTCTTGGCTAGAAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR GCA 90 bp | TTCTGCTCCCGTTTTCTAGCCAAGAGGACCCAGTCTTATATACTTTaGCAACAATGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTG | + |
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Preference number: 1 (lower is better) Translates to: FCSRFLAKRTQSYIL*QQWQLSSAKLSLTL Trigger: CAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTGGGTCCTCTTGGCTAGAAAACGGGAGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR TCA 90 bp | AATGTTGAACAAAGTGCTAAGATAAAACTTAGCCCAAACCTGTACTaGCCGTTCCGGCGAAAGCACCACCACGTTATCAATACTGCACCA | + |
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Preference number: 1 (lower is better) Translates to: NVEQSAKIKLSPNLY*PFRRKHHHVINTAP Trigger: TGGTGCAGTATTGATAACGTGGTGGTGCTTTCGCCGGAACGGTCAGTACAGGTTTGGGCTAAGTTTTATCTTAGCACTTTGTTCAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR GCA 90 bp | AGAGTGTGGAATTCTCTCTGTAGCAGCAGCCACAGAGTAAGTCCCTaGACATGGATTGTTTTGTCACACCTGCACTTTAAGAAGGATTTT | + |
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Preference number: 1 (lower is better) Translates to: RVWNSLCSSSHRVSP*TWIVLSHLHFKKDF Trigger: AAAATCCTTCTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAGAGAATTCCACACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CCA 90 bp | TGGAATTCTCTCTGTAGCAGCAGCCACAGAGTAAGTCCCTGCACATaGATTGTTTTGTCACACCTGCACTTTAAGAAGGATTTTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: WNSLCSSSHRVSPCT*IVLSHLHFKKDFSS Trigger: TGATGAAAAATCCTTCTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAGAGAATTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR GCA 90 bp | TTGTCGGTAGGCACTGTAATCAGTGTTTCTCAACACCCATCTCTTTaGCCCTTTATGGTTTGTCAACCTTCCAACATTATTTTTATTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSVGTVISVSQHPSL*PFMVCQPSNIIFIV Trigger: CACAATAAAAATAATGTTGGAAGGTTGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGAGAAACACTGATTACAGTGCCTACCGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCGAGGCAGACGCTCCCTaGGGAGGGGGTGACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSEADAP*GGGDCL Trigger: GAGACAGTCACCCCCTCCCCAGGGAGCGTCTGCCTC...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCGTTCCCTCTCACTACTaGGCCAGCTCGGCAATCCAG | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSVPSHY*ASSAIQ Trigger: CTGGATTGCCGAGCTGGCTCAGTAGTGAGAGGGAAC...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTTCCCTGGGGAGGGGGTaGCTGTCTCTCTCCACATCT | + |
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Preference number: 2 (lower is better) Translates to: QSTLPSRKEPARQTSMRPSLGRG*LSLSTS Trigger: AGATGTGGAGAGAGACAGTCACCCCCTCCCCAGGGA...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGATCCTTGGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTACCACATAGCTCCTGAGCAGGAGTaGTTGGAGCTTGGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LWDPWQVQSPRLRPQYHIAPEQE*LELGAS Trigger: ACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGGAGC...TATGTGGTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCGAACTGTCAGCTCCCTaGAGTGCCTATGTGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSELSAP*SAYVEM Trigger: CATCTCCACATAGGCACTCCAGGGAGCTGACAGTTC...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTGCGTCAAGGCCACTCTaGCCTCCTAACTTGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QSTLPSRKEPARQTSMRPASRPL*PPNLVS Trigger: AGAGACCAAGTTAGGAGGTCAGAGTGGCCTTGACGC...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCGCCCATTTGGGATGTaGACACTTGGGAAGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSRPFGM*TLGKDS Trigger: AGAATCCTTCCCAAGTGTGCACATCCCAAATGGGCG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | GGAGTGCTTGGAGCTTGGGGCCAGTTTGGGCTGCACGGCGAGACCTaGTTAAAAACAGGGAGAGGTGAAAGAGAGGGTAGGACTTCGGTT | + |
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Preference number: 2 (lower is better) Translates to: GVLGAWGQFGLHGET*LKTGRGEREGRTSV Trigger: AACCGAAGTCCTACCCTCTCTTTCACCTCTCCCTGTTTTTAACAAGGTCTCGCCGTGCAGCCCAAACTGGCCCCAAGCTCCAAGCACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGACCACCACGCCCATTTaGGATGTGCACACTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: AHDLAQANQCPIPELHSQTTTPI*DVHTWE Trigger: TTCCCAAGTGTGCACATCCCAAATGGGCGTGGTGGT...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCAATACTCATGTCTTTaGGAATCACCCAGGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSQYSCL*ESPRLL Trigger: AAGCAGCCTGGGTGATTCTCAAAGACATGAGTATTG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGCTGACTAATCTACTGTaGTGTCACCATCTCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AHDLAQANQCPIPELHSQLTNLL*CHHLPS Trigger: GGAGGGGAGATGGTGACAGCACAGTAGATTAGTCAG...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTACACTGCCCAGAGTGTaGAATTCTCTCTGTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QSTLPSRKEPARQTSMRPTLPRV*NSLCSS Trigger: GCTGCTACAGAGAGAATTCCACACTCTGGGCAGTGT...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATACTTTGCCAACAATaGCAACTGAGCTCGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSILCQQ*QLSSAK Trigger: CTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTAT...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACATCACCCAGGCTGCTTaGCAGTGCAGCGTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDITQAA*QCSVKA Trigger: GGCCTTGACGCTGCACTGCCAAGCAGCCTGGGTGAT...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | CTTTTCTGTTGTCGAGTAGACACTCTGGGGATCAAGCCCACGACCTaGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LFCCRVDTLGIKPTT*LRLTSVLSLSYIPS Trigger: GCTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGCTTGATCCCCAGAGTGTCTACTCGACAACAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCTCTTTGCCCCTTTATaGTTTGTCAACCTTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSLFAPL*FVNLPT Trigger: TGTTGGAAGGTTGACAAACCATAAAGGGGCAAAGAG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATTCAAGGTCATCCTTaGCTACATAGCAGGTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSIQGHP*LHSRFK Trigger: CTTGAACCTGCTATGTAGCCAAGGATGACCTTGAAT...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCAGTCTTATATACTTTaGCAACAATGGCAACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSQSYIL*QQWQLS Trigger: GCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCCCAGCCACTTCTCTTaGTTTTTGAAACATAATGTG | + |
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Preference number: 2 (lower is better) Translates to: RAEQSTLPSRKEPARQTSPSHFS*FLKHNV Trigger: CACATTATGTTTCAAAAAGCAAGAGAAGTGGCTGGG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTTTCATGTTCCCTCTCTaGCCCCTTACTTTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QSTLPSRKEPARQTSMRPFMFPL*PLTFLL Trigger: CAACAGAAAAGTAAGGGGGCAGAGAGGGAACATGAA...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGCAACACCCATCTCTTTaGCCCTTTATGGTTTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: AHDLAQANQCPIPELHSQQHPSL*PFMVCQ Trigger: TTGACAAACCATAAAGGGGCAAAGAGATGGGTGTTG...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACTCTCCCCAAACTTCTTaGCCCTTCTCCCAAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDSPQTS*PFSQAF Trigger: GAAGGCTTGGGAGAAGGGGCAAGAAGTTTGGGGAGA...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | CCTGGGGAGGGGGTGACTGTCTCTCTCCACATCTGTAAGATTCACTaGATGGCTCATGTCTCCAAATACTACCTGATGTGGCATCCAATT | + |
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Preference number: 2 (lower is better) Translates to: PGEGVTVSLHICKIH*MAHVSKYYLMWHPI Trigger: AATTGGATGCCACATCAGGTAGTATTTGGAGACATGAGCCATCAAGTGAATCTTACAGATGTGGAGAGAGACAGTCACCCCCTCCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACATCAAAAAGACGGGTTaGCGGGCTGAGCAAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDIKKTG*RAEQST Trigger: TGTACTTTGCTCAGCCCGTCAACCCGTCTTTTTGAT...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR GCA 90 bp | CAACAATGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTGCCCAGAGTGTGGACACAAAATCTGTGGTaGAGGCCTGGTAATACATCC | + |
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Preference number: 2 (lower is better) Translates to: QQWQLSSAKLSLTLPRVWTQNLW*RPGNTS Trigger: GGATGTATTACCAGGCCTGCACCACAGATTTTGTGT...CCACACTCTGGGCAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTTCTGACCTCCTAACTTaGTCTCTGGAAGCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: DYKCMFISPAPEQECLELSDLLT*SLEAEA Trigger: TGCCTCTGCTTCCAGAGACCAAGTTAGGAGGTCAGA...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGCAAAAATTTACATCCTaGGAAAAAGCCCACTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRQKFTS*EKAHSG Trigger: GCCAGAGTGGGCTTTTTCCCAGGATGTAAATTTTTG...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | ATTCTGCTCCCGTTTTCTAGCCAAGAGGACCCAGTCTTATATACTTaGCCAACAATGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACT | + |
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Preference number: 2 (lower is better) Translates to: ILLPFSSQEDPVLYT*PTMATELGKAKSNT Trigger: AGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTGGGTCCTCTTGGCTAGAAAACGGGAGCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | CCTGATGTGGCATCCAATTCCAGCACGCCCATCCTTTGCCTCCTATaGGAGGATATGGCTCATCTACTAATCCATTACACCATTAACTTT | + |
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Preference number: 2 (lower is better) Translates to: PDVASNSSTPILCLL*EDMAHLLIHYTINF Trigger: AAAGTTAATGGTGTAATGGATTAGTAGATGAGCCATATCCTCCAATAGGAGGCAAAGGATGGGCGTGCTGGAATTGGATGCCACATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | CACTTTGAGAGACTATTTGATGCTAATGAGAGCGTGGGTCTGGACTaGTCGGTAGGCACTGTAATCAGTGTTTCTCAACACCCATCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HFERLFDANESVGLD*SVGTVISVSQHPSL Trigger: AAGAGATGGGTGTTGAGAAACACTGATTACAGTGCCTACCGACAAGTCCAGACCCACGCTCTCATTAGCATCAAATAGTCTCTCAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGTTAGCCTGGGCTACATaGGATTCTAATCTTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRLAWAT*DSNLKG Trigger: TCCTTTAAGATTAGAATCTCATGTAGCCCAGGCTAA...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGGAATGTGAATGGACATaGGATATGTTACAAGTCACA | + |
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Preference number: 2 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRECEWT*DMLQVT Trigger: TGTGACTTGTAACATATCTCATGTCCATTCACATTC...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR TCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTGTAACACAGAGAGAATaGGAAAGAACTAACTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: DYKCMFISPAPEQECLELVTQRE*ERTNSL Trigger: CAAGGAGTTAGTTCTTTCTCATTCTCTCTGTGTTAC...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | CTCTGTAGCAGCAGCCACAGAGTAAGTCCCTGCACATGGATTGTTTaGTCACACCTGCACTTTAAGAAGGATTTTTCATCACCTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: LCSSSHRVSPCTWIV*SHLHFKKDFSSPKI Trigger: AATTTTAGGTGATGAAAAATCCTTCTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR CAA 90 bp | ACATTATTAAATGATACAACTCTAAATTACATGAAGTCTCACACTTaGAGAGACTATTTGATGCTAATGAGAGCGTGGGTCTGGACTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLLNDTTLNYMKSHT*RDYLMLMRAWVWTC Trigger: ACAAGTCCAGACCCACGCTCTCATTAGCATCAAATAGTCTCTCAAAGTGTGAGACTTCATGTAATTTAGAGTTGTATCATTTAATAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| 3UTR-3UTR CAA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCCTGAGCAGGAGTGCTaGGAGCTTGGGGCCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RAEQSTLPSRKEPARQTSPEQEC*ELGASL Trigger: CAAACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | CCCAGGCTGCTTGGCAGTGCAGCGTCAAGGCCACTCTaGCCTCCTAACTTGGTCTCTGGAAGCAGAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRLLGSAASRPL*PPNLVSGSRGS Trigger: GCTGCCTCTGCTTCCAGAGACCAAGTTAGGAGGTCAGAGTGGCCTTGACGCTGCACTGCCAAGCAGCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | CTCCTGAGCAGGAGTGCTTGGAGCTTGGGGCCAGTTTaGGCTGCACGGCGAGACCTTGTTAAAAACAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLSRSAWSLGPV*AARRDLVKNRE Trigger: CTCCCTGTTTTTAACAAGGTCTCGCCGTGCAGCCCAAACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCAGCTCTCTACCCAGCTCCGGGACCACCAGGCCTGAGGCAGACGCTCCCTATCTGTAAGATTCACTaGATGGCTCATGTCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AAALYPAPGPPGLRQTLPICKIH*MAHVSK Trigger: TTTGGAGACATGAGCCATCAAGTGAATCTTACAGAT...AGGGAGCGTCTGCCTCAGGCCTGGTGGTCCCGGAGCTGGGTAGAGAGCTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | AGGAAGCAGGAAGGAAGCAGAGACTGGACGGCTCTGTaGCATCAGAAGATCTTGAGGCTGGGGCTGCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: RKQEGSRDWTAL*HQKILRLGLQT Trigger: GGTTTGCAGCCCCAGCCTCAAGATCTTCTGATGTCACAGAGCCGTCCAGTCTCTGCTTCCTTCCTGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | AAACCAAAGCCCCACATACTTGGGCTCTGGGATCCTTaGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KPKPHILGLWDP*QVQSPRLRPQY Trigger: GTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAGCCCAAGTATGTGGGGCTTTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGAATCACCCAGGCTGCTaGGCAGTGCAGCGTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRNHPGC*AVQRQG Trigger: GCCTTGACGCTGCACTGCCAAGCAGCCTGGGTGATT...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCTCAACACCCATCTCTTaGCCCCTTTATGGTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RAEQSTLPSRKEPARQTSSTPIS*PLYGLS Trigger: TGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGA...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGGATCCTTGGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTACCACATATTTCCTGCCTTAGCCTaGCCACCATGCCTAAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LWDPWQVQSPRLRPQYHIFPALA*PPCLRC Trigger: ACACCTTAGGCATGGTGGCAAGGCTAAGGCAGGAAA...TATGTGGTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | AGGCTCCGTCCTCAGTACCACATAGACCTAGCATGGTaGCATAAGACGGTTACCTCAGCACTCTGGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLRPQYHIDLAW*HKTVTSALWRW Trigger: CCACCTCCAGAGTGCTGAGGTAACCGTCTTATGTCACCATGCTAGGTCTATGTGGTACTGAGGACGGAGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | GGCAGATTACAAATGCATGTTTATAAGCCCAGCTCCTaGGCAGGAGTGCTTGGAGCTTGGGGCCAGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GRLQMHVYKPSS*AGVLGAWGQFG Trigger: CCCAAACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGTGCACATGGATTGTTTaGTCACACCTGCACTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: AHDLAQANQCPIPELHSQCTWIV*SHLHFK Trigger: CTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCA...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGCTGCACGGCGAGACCTaGTTAAAAACAGGGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRLHGET*LKTGRG Trigger: ACCTCTCCCTGTTTTTAACAAGGTCTCGCCGTGCAG...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | AAACTGTGCAGCATATATGGCATTCCTGACCCCCACTaGCTAATCTACTGTGCTGTCACCATCTCCCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: KLCSIYGIPDPH*LIYCAVTISPP Trigger: CGGAGGGGAGATGGTGACAGCACAGTAGATTAGTCAGTGGGGGTCAGGAATGCCATATATGCTGCACAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | TTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATaGGGCCTGAAAGCAAAGCTAAGACGTAAGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLAGRSRPGRLP*GLKAKLRRKVN Trigger: ATTAACCTTACGTCTTAGCTTTGCTTTCAGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACGTCCCTGCACATGGATaGTTTTGTCACACCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDVPAHG*FCHTCT Trigger: AGTGCAGGTGTGACAAAACAATCCATGTGCAGGGAC...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGTTGCCCCTTTATGGTTaGTCAACCTTCCAACATTAT | + |
|
Preference number: 3 (lower is better) Translates to: AHDLAQANQCPIPELHSQLPLYG*STFQHY Trigger: ATAATGTTGGAAGGTTGACAAACCATAAAGGGGCAA...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACATCCTTTGCCTCCTATaGGAGGATATGGCTCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDILCLL*EDMAHL Trigger: TAGATGAGCCATATCCTCCAATAGGAGGCAAAGGAT...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR TCA 72 bp | TCCTGGGAAAAAGCCCACTCTGGCGGCAGTAGATGGTaGACAGGAATATTACAAAGACTTGAACTGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SWEKAHSGGSRW*TGILQRLELSA Trigger: AGCTGACAGTTCAAGTCTTTGTAATATTCCTGTTCACCATCTACTGCCGCCAGAGTGGGCTTTTTCCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | CTCTGTAGCAGCAGCCACAGAGTAAGTCCCTGCACATaGATTGTTTTGTCACACCTGCACTTTAAGAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LCSSSHRVSPCT*IVLSHLHFKKD Trigger: ATCCTTCTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | GCCAAGAGGACCCAGTCTTATATACTTTGCCAACAATaGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AKRTQSYILCQQ*QLSSAKLSLTL Trigger: CAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTGGGTCCTCTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | GTGGAGACAGAAGTATCACAAATTCAAGGTCATCCTTaGCTACATAGCAGGTTCAAGGTTAGCCTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: VETEVSQIQGHP*LHSRFKVSLGY Trigger: GTAGCCCAGGCTAACCTTGAACCTGCTATGTAGCCAAGGATGACCTTGAATTTGTGATACTTCTGTCTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | GACGTAAGGTTAATCACTAGGTTGATTTGGGGAGTGTaGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DVRLITRLIWGV*QMPFQEKEAGR Trigger: CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCTAGTGATTAACCTTACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR GCA 72 bp | AATTCTCTCTGTAGCAGCAGCCACAGAGTAAGTCCCTaGACATGGATTGTTTTGTCACACCTGCACTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NSLCSSSHRVSP*TWIVLSHLHFK Trigger: CTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCTGCTACAGAGAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR GCA 72 bp | CGTTTTCTAGCCAAGAGGACCCAGTCTTATATACTTTaGCAACAATGGCAACTGAGCTCGGCAAAGCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RFLAKRTQSYIL*QQWQLSSAKLS Trigger: ACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTGGCAAAGTATATAAGACTGGGTCCTCTTGGCTAGAAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CCA 72 bp | AGCCAGATCACTACCAAGTTTCAAGCCAGGGAGAGATaGCAAAAATTTACATCCTGGGAAAAAGCCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQITTKFQARER*QKFTSWEKAHS Trigger: AGAGTGGGCTTTTTCCCAGGATGTAAATTTTTGCCATCTCTCCCTGGCTTGAAACTTGGTAGTGATCTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR-3UTR CAA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTGACTTCGGTTTTAAGTaGATGAAGTCCTGTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DYKCMFISPAPEQECLELDFGFK*MKSCLQ Trigger: TTGAAGACAGGACTTCATCAACTTAAAACCGAAGTC...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR GCA 72 bp | GGCACTGTAATCAGTGTTTCTCAACACCCATCTCTTTaGCCCTTTATGGTTTGTCAACCTTCCAACATTATT | + |
|
Preference number: 3 (lower is better) Translates to: GTVISVSQHPSL*PFMVCQPSNII Trigger: AATAATGTTGGAAGGTTGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGAGAAACACTGATTACAGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGCTCTCTACCCAGCTCCGGGACCACCAGGCCTGAGGCAGACGCTCCCTGGCGCCACGGGTCGGTaGTGGATATGCTGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAALYPAPGPPGLRQTLPGATGR*WICCSC Trigger: ACAGGAGCAGCATATCCATCACCGACCCGTGGCGCC...AGGGAGCGTCTGCCTCAGGCCTGGTGGTCCCGGAGCTGGGTAGAGAGCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCTCTCTACCCAGCTCCGGGACCACCAGGCCTGAGGCAGACGCTCCCTGCTAGAGTCACTTCTTaGAGCTCTAACACGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAALYPAPGPPGLRQTLPARVTS*SSNTAS Trigger: AGAGGCCGTGTTAGAGCTCCAAGAAGTGACTCTAGC...AGGGAGCGTCTGCCTCAGGCCTGGTGGTCCCGGAGCTGGGTAGAGAGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTGGCACGGCACAGCTTTaGAAACGCCGCTGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSTLPSRKEPARQTSMRPGTAQL*KRRCHL Trigger: CAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCC...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCCTCGCTTTGTCCATCTaGGAATCATCCAGAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAEQSTLPSRKEPARQTSLALSI*ESSRVA Trigger: GGCCACTCTGGATGATTCCCAGATGGACAAAGCGAG...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | TGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTaGGAGCTTGGGGCCAGTTTGGGCTGCACGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CMFISPAPEQEC*ELGASLGCTAR Trigger: TCTCGCCGTGCAGCCCAAACTGGCCCCAAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGATAGGCAGGACCTGGTaGCACACCGAGATCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHDLAQANQCPIPELHSQIGRTW*HTEISQ Trigger: CTGAGAGATCTCGGTGTGCCACCAGGTCCTGCCTAT...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR TCA 90 bp | CAACAATGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTGCCCAGAGTGTGGAGCCACTCTGCAGGCTaGTGGTACAGAGGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQWQLSSAKLSLTLPRVWSHSAG*WYRGGL Trigger: CAGGCCTCCTCTGTACCATCAGCCTGCAGAGTGGCT...CCACACTCTGGGCAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTAACGCCGCTGCCATCTaGGGCGTGCTGTGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DYKCMFISPAPEQECLELNAAAI*GVLWPC Trigger: GCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTT...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCATGAGGCCTTCTCGCCAAGGCGGTTaGTTTGTACCTCTGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSTLPSRKEPARQTSMRPSRQGG*FVPLTE Trigger: TTCAGTCAGAGGTACAAACCAACCGCCTTGGCGAGA...AGGCCTCATGGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCAACAGTCACCCAGGATaGAAACTTTTCTTCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RAEQSTLPSRKEPARQTSNSHPG*KLFFQP Trigger: TGGTTGGAAGAAAAGTTTGCATCCTGGGTGACTGTT...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGCCCATAGGCAGGACCTaGTGGCACACCGAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRPIGRT*WHTEIS Trigger: AGAGATCTCGGTGTGCCACCAGGTCCTGCCTATGGG...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR TCA 90 bp | CAACAATGGCAACTGAGCTCGGCAAAGCTAAGTCTAACACTGCCCAGAGTGTGGAACACCAACTCCGTGTaGGAGAGCTCCATGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQWQLSSAKLSLTLPRVWNTNSV*ESSMVL Trigger: GAGAACCATGGAGCTCTCTCACACGGAGTTGGTGTT...CCACACTCTGGGCAGTGTTAGACTTAGCTTTGCCGAGCTCAGTTGCCATTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | ACTCACAACCCACAACACAAAATCTGTGGTGCAGGCCTGGTAATACATCCATACTTGCTTCCTCAGCTCTaGGATGCCGTCTGCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: THNPQHKICGAGLVIHPYLLPQL*DAVCLP Trigger: GGGGAGGCAGACGGCATCGCAGAGCTGAGGAAGCAA...GTATGGATGTATTACCAGGCCTGCACCACAGATTTTGTGTTGTGGGTTGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACGGTACAGAGGAGGCCTaGAAGGCCAAAGAAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDGTEEA*KAKEVV Trigger: GACCACTTCTTTGGCCTTCCAGGCCTCCTCTGTACC...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGATCCTTGGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTACCACATATCTTCTACAGGACACTaGTCAGCTGTAGGAACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWDPWQVQSPRLRPQYHISSTGH*SAVGTS Trigger: GCTAGTTCCTACAGCTGACCAGTGTCCTGTAGAAGA...TATGTGGTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGATCCTTGGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTACCACATAAAGAAGTGGTCGCCATaGAGATGTGTGATGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LWDPWQVQSPRLRPQYHIKKWSP*RCVMKI Trigger: GATCTTCATCACACATCTCCATGGCGACCACTTCTT...TATGTGGTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGATCCTTGGCAGGTACAGAGTCCTAGGCTCCGTCCTCAGTACCACATATTCGTCCTTGTCCTTTaGGAGAGCTGTCTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWDPWQVQSPRLRPQYHIFVLVL*ESCLFH Trigger: ATGAAACAGACAGCTCTCCCAAAGGACAAGGACGAA...TATGTGGTACTGAGGACGGAGCCTAGGACTCTGTACCTGCCAAGGATCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGGTTTGTACCTCTGACTaGAGTGGGTCAGAACTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRVCTSD*SGSELA Trigger: GGCTAGTTCTGACCCACTTCAGTCAGAGGTACAAAC...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTACCACAGAGCCACTCTaGAGGCTGATGGTACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DYKCMFISPAPEQECLELTTEPL*RLMVQR Trigger: CCTCTGTACCATCAGCCTGCAGAGTGGCTCTGTGGT...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | CACTGTAATCAGTGTTTCTCAACACCCATCTCTTTGCCCCTTTATGGTTTGTCACTTTGCAAACGCCGCTaGCATCTGCGGCGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCNQCFSTPISLPLYGLSLCKRR*HLRRAV Trigger: CACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAG...TGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGAGAAACACTGATTACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGTGGAGGAGAAACATCACATACAGAGGCTAAATGAAGCTGTGACCGACTGGCTTTTCATAAGCTaGGTCTGTGTTCCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVEEKHHIQRLNEAVTDWLFIS*VCVPSP Trigger: TGGGGAGGGAACACAGACCCAGCTTATGAAAAGCCA...GTCGGTCACAGCTTCATTTAGCCTCTGTATGTGATGTTTCTCCTCCACAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGTCAGAACTAGCCTCTTaGCACGGCACAGCTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRSELAS*HGTALQ Trigger: TTGCAAAGCTGTGCCGTGCCAAGAGGCTAGTTCTGA...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | GCATCCAATTCCAGCACGCCCATCCTTTGCCTCCTATaGGAGGATATGGCTCATCTACTAATCCATTACACC | + |
|
Preference number: 4 (lower is better) Translates to: ASNSSTPILCLL*EDMAHLLIHYT Trigger: GGTGTAATGGATTAGTAGATGAGCCATATCCTCCAATAGGAGGCAAAGGATGGGCGTGCTGGAATTGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | GCGGCAGTAGATGGTGAACAGGAATATTACAAAGACTaGAACTGTCAGCTCCCTGGAGTGCCTATGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAVDGEQEYYKD*NCQLPGVPMWR Trigger: TCTCCACATAGGCACTCCAGGGAGCTGACAGTTCAAGTCTTTGTAATATTCCTGTTCACCATCTACTGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | CACTGTAATCAGTGTTTCTCAACACCCATCTCTTTGCCCCTTTATGGTTTGTCAAACACGGCCTCTGCTTaGTTCCTCAGCTCTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: HCNQCFSTPISLPLYGLSNTASA*FLSSAM Trigger: CATCGCAGAGCTGAGGAAGCAAGCAGAGGCCGTGTT...TGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGAGAAACACTGATTACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR TCA 90 bp | ACTCACAACCCACAACACAAAATCTGTGGTGCAGGCCTGGTAATACATCCATACGTTGGTTTGTACCTCTaGCTGAAGTGGGTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: THNPQHKICGAGLVIHPYVGLYL*LKWVRT Trigger: AGTTCTGACCCACTTCAGTCAGAGGTACAAACCAAC...GTATGGATGTATTACCAGGCCTGCACCACAGATTTTGTGTTGTGGGTTGTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTCTCCCTGCTTTAAGCTaGCTTTTCATAAGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DYKCMFISPAPEQECLELLPALS*LFISWV Trigger: GACCCAGCTTATGAAAAGCCAGCTTAAAGCAGGGAG...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CCA 90 bp | CACTGTAATCAGTGTTTCTCAACACCCATCTCTTTGCCCCTTTATGGTTTGTCAGGAAGGCCAAAGAAGTaGTCGCCATGGAGATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCNQCFSTPISLPLYGLSGRPKK*SPWRCV Trigger: CACACATCTCCATGGCGACCACTTCTTTGGCCTTCC...TGACAAACCATAAAGGGGCAAAGAGATGGGTGTTGAGAAACACTGATTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | AGGTTGATTTGGGGAGTGTGGCAAATGCCATTTCAGGAGAAGGAAGCAGGAAGGATGAAAGAGGCGAAATaGTTTTACCACAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLIWGVWQMPFQEKEAGRMKEAK*FYHKLL Trigger: GAGCAGTTTGTGGTAAAAGCATTTCGCCTCTTTCAT...CCTTCCTGCTTCCTTCTCCTGAAATGGCATTTGCCACACTCCCCAAATCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTTGCGTTGAGTTTACCTaGACGCTTCTTTTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DYKCMFISPAPEQECLELCVEFT*TLLFHN Trigger: GTTGTGGAAAAGAAGCGTGCAGGTAAACTCAACGCA...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | ATACACCTTTGTGAGGTGAAATACCACCACGCCCATTaGGGATGTGCACACTTGGGAAGGATTCTTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IHLCEVKYHHAH*GCAHLGRILIS Trigger: TGAAATAAGAATCCTTCCCAAGTGTGCACATCCCAAATGGGCGTGGTGGTATTTCACCTCACAAAGGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | AGCAGCCACAGAGTAAGTCCCTGCACATGGATTGTTTaGTCACACCTGCACTTTAAGAAGGATTTTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHRVSPCTWIV*SHLHFKKDFSS Trigger: TGATGAAAAATCCTTCTTAAAGTGCAGGTGTGACAAAACAATCCATGTGCAGGGACTTACTCTGTGGCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR GCA 90 bp | GATTACAAATGCATGTTTATAAGCCCAGCTCCTGAGCAGGAGTGCTTGGAGCTTTGTTTCATCCATGTGTaGAAATTCTCTCAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DYKCMFISPAPEQECLELCFIHV*KFSQFF Trigger: GAAGAACTGAGAGAATTTGCACACATGGATGAAACA...AAGCTCCAAGCACTCCTGCTCAGGAGCTGGGCTTATAAACATGCATTTGTAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| 3UTR CAA 72 bp | AATGATACAACTCTAAATTACATGAAGTCTCACACTTaGAGAGACTATTTGATGCTAATGAGAGCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NDTTLNYMKSHT*RDYLMLMRAWV Trigger: GACCCACGCTCTCATTAGCATCAAATAGTCTCTCAAAGTGTGAGACTTCATGTAATTTAGAGTTGTATCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | GCCATCTGCGGCGTGCTGTGGCCGTGCTCTCTCGCTTTGTCCATCTaGGAATCATCCAGAGTGGCCTCGTGGATCAGCAGGTCGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AICGVLWPCSLALSI*ESSRVASWISRSAS Trigger: TGAGGCCGACCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 90 bp | CACAGCTTTGCAAACGCCGCTGCCATCTGCGGCGTGCTGTGGCCGTaGTCTCTCGCTTTGTCCATCTGGGAATCATCCAGAGTGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSFANAAAICGVLWP*SLALSIWESSRVAS Trigger: CGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 90 bp | ACTAGCCTCTTGGCACGGCACAGCTTTGCAAACGCCGCTGCCATCTaGGGCGTGCTGTGGCCGTGCTCTCTCGCTTTGTCCATCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLLARHSFANAAAI*GVLWPCSLALSIWE Trigger: TTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCCAAGAGGCTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | GCACGGCACAGCTTTGCAAACGCCGCTGCCATCTGCGGCGTGCTGTaGCCGTGCTCTCTCGCTTTGTCCATCTGGGAATCATCCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARHSFANAAAICGVL*PCSLALSIWESSRV Trigger: CACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 90 bp | CTCGCCCTCGCACCGAAGAACCACCGCAGAGGCGCCACGGGTCGGTaGTGGATATGCTGCTCCTGTCCCAAGAAAGGTCACATCCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: LALAPKNHRRGATGR*WICCSCPKKGHIHR Trigger: TCTATGGATGTGACCTTTCTTGGGACAGGAGCAGCATATCCATCACCGACCCGTGGCGCCTCTGCGGTGGTTCTTCGGTGCGAGGGCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 90 bp | TCTTGGCACGGCACAGCTTTGCAAACGCCGCTGCCATCTGCGGCGTaGTGTGGCCGTGCTCTCTCGCTTTGTCCATCTGGGAATCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWHGTALQTPLPSAA*CGRALSLCPSGNHP Trigger: TGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 90 bp | CTTGGAGCTCTAACACGGCCTCTGCTTGCTTCCTCAGCTCTGCGATaGCGTCTGCCTCCCCTTCTCTCGCCAAGGCGGTTGGTTTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: LGALTRPLLASSALR*RLPPLLSPRRLVCT Trigger: GGTACAAACCAACCGCCTTGGCGAGAGAAGGGGAGGCAGACGGCATCGCAGAGCTGAGGAAGCAAGCAGAGGCCGTGTTAGAGCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | TGCTCTCTCGCTTTGTCCATCTGGGAATCATCCAGAGTGGCCTCGTaGATCAGCAGGTCGGCCTCAAAGCACAGCTTCACGCCCCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLALSIWESSRVAS*ISRSASKHSFTPPS Trigger: TGACGGGGGCGTGAAGCTGTGCTTTGAGGCCGACCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | TGTGGCCGTGCTCTCTCGCTTTGTCCATCTGGGAATCATCCAGAGTaGCCTCGTGGATCAGCAGGTCGGCCTCAAAGCACAGCTTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: CGRALSLCPSGNHPE*PRGSAGRPQSTASR Trigger: GCGTGAAGCTGTGCTTTGAGGCCGACCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CAA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGTGGCACGGCACAGCTTaGCAAACGCCGCTGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: AHDLAQANQCPIPELHSQWHGTA*QTPLPS Trigger: AGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCCA...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 90 bp | CCGTCTGCCTCCCCTTCTCTCGCCAAGGCGGTTGGTTTGTACCTCTaGCTGAAGTGGGTCAGAACTAGCCTCTTGGCACGGCACAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSASPSLAKAVGLYL*LKWVRTSLLARHSF Trigger: AAAGCTGTGCCGTGCCAAGAGGCTAGTTCTGACCCACTTCAGTCAGAGGTACAAACCAACCGCCTTGGCGAGAGAAGGGGAGGCAGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 90 bp | CTGCCTCCCCTTCTCTCGCCAAGGCGGTTGGTTTGTACCTCTGACTaGAGTGGGTCAGAACTAGCCTCTTGGCACGGCACAGCTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPPLLSPRRLVCTSD*SGSELASWHGTALQ Trigger: TTGCAAAGCTGTGCCGTGCCAAGAGGCTAGTTCTGACCCACTTCAGTCAGAGGTACAAACCAACCGCCTTGGCGAGAGAAGGGGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | GGCGACCACAGAGCCACTCTGCAGGCTGATGGTACAGAGGAGGCCTaGAAGGCCAAAGAAGTGGTCGCCATGGAGATGTGTGATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDHRATLQADGTEEA*KAKEVVAMEMCDED Trigger: ATCTTCATCACACATCTCCATGGCGACCACTTCTTTGGCCTTCCAGGCCTCCTCTGTACCATCAGCCTGCAGAGTGGCTCTGTGGTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CAA 90 bp | CGGGCTGAGCAAAGTACACTTCCTAGCAGGAAGGAGCCGGCCAGGCAGACTTCCGTTCGTCCTTGTCCTTaGGGAGAGCTGTCTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAEQSTLPSRKEPARQTSVRPCP*GELSVS Trigger: TGAAACAGACAGCTCTCCCAAAGGACAAGGACGAAC...GGAAGTCTGCCTGGCCGGCTCCTTCCTGCTAGGAAGTGTACTTTGCTCAGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 90 bp | AGGCAGGACCTGGTGGCACACCGAGATCTCTCAGCTTCTGTGCGTTaGGTTTACCTGCACGCTTCTTTTCCACAACTGAAAAGCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQDLVAHRDLSASVR*VYLHASFPQLKSQR Trigger: CCTTTGGCTTTTCAGTTGTGGAAAAGAAGCGTGCAGGTAAACTCAACGCACAGAAGCTGAGAGATCTCGGTGTGCCACCAGGTCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | CTCTGCAGGCTGATGGTACAGAGGAGGCCTGGAAGGCCAAAGAAGTaGTCGCCATGGAGATGTGTGATGAAGATCTTGGTAATTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCRLMVQRRPGRPKK*SPWRCVMKILVILP Trigger: AGGGAGAATTACCAAGATCTTCATCACACATCTCCATGGCGACCACTTCTTTGGCCTTCCAGGCCTCCTCTGTACCATCAGCCTGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | CTGATGGTACAGAGGAGGCCTGGAAGGCCAAAGAAGTGGTCGCCATaGAGATGTGTGATGAAGATCTTGGTAATTCTCCCTGCTTTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMVQRRPGRPKKWSP*RCVMKILVILPALS Trigger: GCTTAAAGCAGGGAGAATTACCAAGATCTTCATCACACATCTCCATGGCGACCACTTCTTTGGCCTTCCAGGCCTCCTCTGTACCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 90 bp | ATCGGAATGCCGATCACCATAAAATCTTCTGCTAGAGTCACTTCTTaGAGCTCTAACACGGCCTCTGCTTGCTTCCTCAGCTCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IGMPITIKSSARVTS*SSNTASACFLSSAM Trigger: CATCGCAGAGCTGAGGAAGCAAGCAGAGGCCGTGTTAGAGCTCCAAGAAGTGACTCTAGCAGAAGATTTTATGGTGATCGGCATTCCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS-3UTR CAA 90 bp | GCCCACGACCTTGCTCAGGCTAACCAGTGTCCTATCCCTGAGCTACATTCCCAGTGTGTGATGAAGATCTaGGTAATTCTCCCTGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AHDLAQANQCPIPELHSQCVMKI*VILPAL Trigger: TAAAGCAGGGAGAATTACCAAGATCTTCATCACACA...CTGGGAATGTAGCTCAGGGATAGGACACTGGTTAGCCTGAGCAAGGTCGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 90 bp | AGTTCGTCCTTGTCCTTTGGGAGAGCTGTCTGTTTCATCCATGTGTaGAAATTCTCTCAGTTCTTCTACAGGACACTGGTCAGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSFGRAVCFIHV*KFSQFFYRTLVSCR Trigger: CCTACAGCTGACCAGTGTCCTGTAGAAGAACTGAGAGAATTTGCACACATGGATGAAACAGACAGCTCTCCCAAAGGACAAGGACGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 72 bp | GGCACAGCTTTGCAAACGCCGCTGCCATCTGCGGCGTaGTGTGGCCGTGCTCTCTCGCTTTGTCCATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTALQTPLPSAA*CGRALSLCPSG Trigger: CCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 72 bp | TTGGCACGGCACAGCTTTGCAAACGCCGCTGCCATCTaGGGCGTGCTGTGGCCGTGCTCTCTCGCTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LARHSFANAAAI*GVLWPCSLALS Trigger: GGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CAA 90 bp | AACGCCGCTGCCATCTGCGGCGTGCTGTGGCCGTGCTCTCTCGCTTaGTCCATCTGGGAATCATCCAGAGTGGCCTCGTGGATCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NAAAICGVLWPCSLA*SIWESSRVASWISR Trigger: CCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 72 bp | CTAACACGGCCTCTGCTTGCTTCCTCAGCTCTGCGATaGCGTCTGCCTCCCCTTCTCTCGCCAAGGCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTRPLLASSALR*RLPPLLSPRRL Trigger: CAACCGCCTTGGCGAGAGAAGGGGAGGCAGACGGCATCGCAGAGCTGAGGAAGCAAGCAGAGGCCGTGTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CAA 72 bp | GCCATCTGCGGCGTGCTGTGGCCGTGCTCTCTCGCTTaGTCCATCTGGGAATCATCCAGAGTGGCCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AICGVLWPCSLA*SIWESSRVASW Trigger: CCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CAA 72 bp | AGTGGGTCAGAACTAGCCTCTTGGCACGGCACAGCTTaGCAAACGCCGCTGCCATCTGCGGCGTGCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSELASWHGTA*QTPLPSAACCG Trigger: GCCACAGCACGCCGCAGATGGCAGCGGCGTTTGCAAAGCTGTGCCGTGCCAAGAGGCTAGTTCTGACCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 72 bp | GCACCGAAGAACCACCGCAGAGGCGCCACGGGTCGGTaGTGGATATGCTGCTCCTGTCCCAAGAAAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: APKNHRRGATGR*WICCSCPKKGH Trigger: GTGACCTTTCTTGGGACAGGAGCAGCATATCCATCACCGACCCGTGGCGCCTCTGCGGTGGTTCTTCGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS GCA 72 bp | GCAAACGCCGCTGCCATCTGCGGCGTGCTGTGGCCGTaGTCTCTCGCTTTGTCCATCTGGGAATCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ANAAAICGVLWP*SLALSIWESSR Trigger: TCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCCGCAGATGGCAGCGGCGTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 72 bp | GGCGTGCTGTGGCCGTGCTCTCTCGCTTTGTCCATCTaGGAATCATCCAGAGTGGCCTCGTGGATCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVLWPCSLALSI*ESSRVASWISR Trigger: CCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGCACGGCCACAGCACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 72 bp | TCCCCTTCTCTCGCCAAGGCGGTTGGTTTGTACCTCTaGCTGAAGTGGGTCAGAACTAGCCTCTTGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SPSLAKAVGLYL*LKWVRTSLLAR Trigger: CCGTGCCAAGAGGCTAGTTCTGACCCACTTCAGTCAGAGGTACAAACCAACCGCCTTGGCGAGAGAAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 72 bp | AGAGCCACTCTGCAGGCTGATGGTACAGAGGAGGCCTaGAAGGCCAAAGAAGTGGTCGCCATGGAGATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RATLQADGTEEA*KAKEVVAMEMC Trigger: ACACATCTCCATGGCGACCACTTCTTTGGCCTTCCAGGCCTCCTCTGTACCATCAGCCTGCAGAGTGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 72 bp | GCTTTGTCCATCTGGGAATCATCCAGAGTGGCCTCGTaGATCAGCAGGTCGGCCTCAAAGCACAGCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: ALSIWESSRVAS*ISRSASKHSFT Trigger: CGTGAAGCTGTGCTTTGAGGCCGACCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS CCA 72 bp | GCTCTCTCGCTTTGTCCATCTGGGAATCATCCAGAGTaGCCTCGTGGATCAGCAGGTCGGCCTCAAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: ALSLCPSGNHPE*PRGSAGRPQST Trigger: TGTGCTTTGAGGCCGACCTGCTGATCCACGAGGCCACTCTGGATGATTCCCAGATGGACAAAGCGAGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
||
| CDS TCA 72 bp | CTTCTCTCGCCAAGGCGGTTGGTTTGTACCTCTGACTaGAGTGGGTCAGAACTAGCCTCTTGGCACGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LLSPRRLVCTSD*SGSELASWHGT Trigger: TGTGCCGTGCCAAGAGGCTAGTTCTGACCCACTTCAGTCAGAGGTACAAACCAACCGCCTTGGCGAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CCA 72 bp | AATTCCGTTTTTCAGCTTCCCATAGGCAGGACCTGGTaGCACACCGAGATCTCTCAGCTTCTGTGCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: NSVFQLPIGRTW*HTEISQLLCVE Trigger: CTCAACGCACAGAAGCTGAGAGATCTCGGTGTGCCACCAGGTCCTGCCTATGGGAAGCTGAAAAACGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CCA 72 bp | CAGAGGAGGCCTGGAAGGCCAAAGAAGTGGTCGCCATaGAGATGTGTGATGAAGATCTTGGTAATTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: QRRPGRPKKWSP*RCVMKILVILP Trigger: AGGGAGAATTACCAAGATCTTCATCACACATCTCCATGGCGACCACTTCTTTGGCCTTCCAGGCCTCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CCA 72 bp | AGAAATTCCGTTTTTCAGCTTCCCATAGGCAGGACCTaGTGGCACACCGAGATCTCTCAGCTTCTGTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: RNSVFQLPIGRT*WHTEISQLLCV Trigger: AACGCACAGAAGCTGAGAGATCTCGGTGTGCCACCAGGTCCTGCCTATGGGAAGCTGAAAAACGGAATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CCA 72 bp | GTAATTCTCCCTGCTTTAAGCTGGCTTTTCATAAGCTaGGTCTGTGTTCCCTCCCCACAGTCAAAGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VILPALSWLFIS*VCVPSPQSKSQ Trigger: CTGGCTCTTTGACTGTGGGGAGGGAACACAGACCCAGCTTATGAAAAGCCAGCTTAAAGCAGGGAGAATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS GCA 72 bp | TTGTCCTTTGGGAGAGCTGTCTGTTTCATCCATGTGTaGAAATTCTCTCAGTTCTTCTACAGGACACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSFGRAVCFIHV*KFSQFFYRTLV Trigger: GACCAGTGTCCTGTAGAAGAACTGAGAGAATTTGCACACATGGATGAAACAGACAGCTCTCCCAAAGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CAA 72 bp | TCTTCTGCATCTAGCAAGATAGTTCGTCCTTGTCCTTaGGGAGAGCTGTCTGTTTCATCCATGTGTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSASSKIVRPCP*GELSVSSMCAN Trigger: ATTTGCACACATGGATGAAACAGACAGCTCTCCCAAAGGACAAGGACGAACTATCTTGCTAGATGCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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| CDS CAA 72 bp | AAGAAGTGGTCGCCATGGAGATGTGTGATGAAGATCTaGGTAATTCTCCCTGCTTTAAGCTGGCTTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: KKWSPWRCVMKI*VILPALSWLFI Trigger: TATGAAAAGCCAGCTTAAAGCAGGGAGAATTACCAAGATCTTCATCACACATCTCCATGGCGACCACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041138.3 |
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