Pregenerated sensors for EIPR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036613Ensembl transcript IDs: ENSMUST00000035657.9, ENSMUST00000221555.2, ENSMUST00000221877.2, ENSMUST00000222407.2
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCTCATGCTCCGTGTGTCCCATCCTCGGAGGGTCGTGTCACTTaGTGTGGCCACCTGGGTACAGTTGTGGTGTGGGCTCCACCGCCC | + |
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Preference number: 1 (lower is better) Translates to: LAHAPCVPSSEGRVT*CGHLGTVVVWAPPP Trigger: GGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGGATGGGACACACGGAGCATGAGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR GCA 90 bp | CAGCAGGGCAGTGTGCCTGTCCTGCACAGCGTCTGTCCCTGCCTGTaGACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QQGSVPVLHSVCPCL*TGTQIQVQDMNPWA Trigger: TGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTGTGCAGGACAGGCACACTGCCCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | CCTCGGAGGGTCGTGTCACTTGCTGTGGCCACCTGGGTACAGTTGTaGTGTGGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PRRVVSLAVATWVQL*CGLHRPAVNFSCPL Trigger: AAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | CGTGTGTCCCATCCTCGGAGGGTCGTGTCACTTGCTGTGGCCACCTaGGTACAGTTGTGGTGTGGGCTCCACCGCCCCGCGGTGAACTTC | + |
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Preference number: 1 (lower is better) Translates to: RVSHPRRVVSLAVAT*VQLWCGLHRPAVNF Trigger: GAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGGATGGGACACACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | CACTGTGGGGAGGGCACACCTGTCCACAGGCGAGGAATGGCACTGTaGAGAGGGCACACCTGTCCACAGGTGAGGGATGGCACTGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HCGEGTPVHRRGMAL*RGHTCPQVRDGTVG Trigger: CCCCACAGTGCCATCCCTCACCTGTGGACAGGTGTGCCCTCTCCACAGTGCCATTCCTCGCCTGTGGACAGGTGTGCCCTCCCCACAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR GCA 90 bp | AGGCTAGGCACTCATCCACCTGGAGCCAATGGTCCACAGGAGCCTTaGCTAAGGGACGGCACTGTGGGGAGGGCACACCTGTCCCACAGG | + |
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Preference number: 1 (lower is better) Translates to: RLGTHPPGANGPQEP*LRDGTVGRAHLSHR Trigger: CCTGTGGGACAGGTGTGCCCTCCCCACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGATGAGTGCCTAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | TCCAGTGTTGCTGAGCTGGCCAGCACAGCCTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAATGACC | + |
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Preference number: 1 (lower is better) Translates to: SSVAELASTAWLELG*RSHSRMWLSAREMT Trigger: GGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCTGGCCAGCTCAGCAACACTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | GAGGGTCGTGTCACTTGCTGTGGCCACCTGGGTACAGTTGTGGTGTaGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCCCCTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: EGRVTCCGHLGTVVV*APPPRGELQLSPSF Trigger: GAAGGAAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR TCA 90 bp | ACAGGCGAGGAATGGCACTGTGGAGAGGGCACACCTGTCCACAGGTaGGGGATGGCACTGTGGGGAGGGCACACCAGTCTCACAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: TGEEWHCGEGTPVHR*GMALWGGHTSLTGE Trigger: CTCACCTGTGAGACTGGTGTGCCCTCCCCACAGTGCCATCCCTCACCTGTGGACAGGTGTGCCCTCTCCACAGTGCCATTCCTCGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | AGCACAGCCTGGCTCGAGCTGGGCTGGAGGTCCCACAGCAGGATGTaGCTATCGGCCAGGGAAATGACCTTCTTCCCATCCCCCATCGGT | + |
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Preference number: 1 (lower is better) Translates to: STAWLELGWRSHSRM*LSAREMTFFPSPIG Trigger: ACCGATGGGGGATGGGAAGAAGGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | TTCCTTCCAGTGTTGCTGAGCTGGCCAGCACAGCCTGGCTCGAGCTaGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FLPVLLSWPAQPGSS*AGGPTAGCGYRPGK Trigger: TTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCTGGCCAGCTCAGCAACACTGGAAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | AGGAATGGCACTGTGGAGAGGGCACACCTGTCCACAGGTGAGGGATaGCACTGTGGGGAGGGCACACCAGTCTCACAGGTGAGGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: RNGTVERAHLSTGEG*HCGEGTPVSQVRDG Trigger: GCCATCCCTCACCTGTGAGACTGGTGTGCCCTCCCCACAGTGCCATCCCTCACCTGTGGACAGGTGTGCCCTCTCCACAGTGCCATTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | TGGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAATaGCCTTCTTCCCATCCCCCATCGGTTCCCACACGACACAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: WAGGPTAGCGYRPGK*PSSHPPSVPTRHRP Trigger: TGGCCTGTGTCGTGTGGGAACCGATGGGGGATGGGAAGAAGGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | GGGATGGCACTGTGGGGAGGGCACACCAGTCTCACAGGTGAGGGATaGCACTGTGAGGAGGACATATCTGTCCCACAGGTGAGGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: GMALWGGHTSLTGEG*HCEEDISVPQVRDG Trigger: GCCATCCCTCACCTGTGGGACAGATATGTCCTCCTCACAGTGCCATCCCTCACCTGTGAGACTGGTGTGCCCTCCCCACAGTGCCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | TCCACACCCAGTGGGAGTGCTCCTCCAGGGTCTTCACAGGCTCGGTaGCATTCCGTGTGTCCCAGAACTTCACCTTGCAGTCATCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: STPSGSAPPGSSQAR*HSVCPRTSPCSHLH Trigger: GTGGAGATGACTGCAAGGTGAAGTTCTGGGACACACGGAATGTCACCGAGCCTGTGAAGACCCTGGAGGAGCACTCCCACTGGGTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR TCA 90 bp | TCTGTCCCTGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATaGACCCCTGGGCAGTGCTCCACTTCCCAGGTATACAGATATGTC | + |
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Preference number: 1 (lower is better) Translates to: SVPACAQAPRSRSRT*TPGQCSTSQVYRYV Trigger: GACATATCTGTATACCTGGGAAGTGGAGCACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR GCA 90 bp | GCACCAGCTGCCCATGAGCGTTCTCTATGCAGTATATCTGGCTCATaGTCCGTGTGTCCCATCCTCGGAGGGTCGTGTCACTTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: APAAHERSLCSISGS*SVCPILGGSCHLLW Trigger: CCACAGCAAGTGACACGACCCTCCGAGGATGGGACACACGGAGCATGAGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR GCA 90 bp | TGTACTGTGAAAATGACATCATCCAGCAGGGCAGTGTGCCTGTCCTaGACAGCGTCTGTCCCTGCCTGTGCACAGGCACCCAGATCCAGG | + |
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Preference number: 1 (lower is better) Translates to: CTVKMTSSSRAVCLS*TASVPACAQAPRSR Trigger: CCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTGTGCAGGACAGGCACACTGCCCTGCTGGATGATGTCATTTTCACAGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | AGTAAAGCTCCCGCCCATGCTGAGCAGTGTGCTGACAGCATCAGATaGGCTGCTGGCAGAAGCGCCATGTCCCTCAGAGCTCCTGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: SKAPAHAEQCADSIR*AAGRSAMSLRAPVE Trigger: TTCTACAGGAGCTCTGAGGGACATGGCGCTTCTGCCAGCAGCTCATCTGATGCTGTCAGCACACTGCTCAGCATGGGCGGGAGCTTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | TGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTaGGCAGTGCTCCACTTCCCAGGTATACAGATATGTCAGGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: CLCTGTQIQVQDMNP*AVLHFPGIQICQVR Trigger: CCTAACCTGACATATCTGTATACCTGGGAAGTGGAGCACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | GCAGGGGTTCCTTGCTCTTTTCAGCATGGTGCTCTTCTGGATCACTaGTGTCACCGTCGTCCACCAGGTGACCAAAGGGCTCTGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: AGVPCSFQHGALLDH*CHRRPPGDQRALRR Trigger: TCTCCTCAGAGCCCTTTGGTCACCTGGTGGACGACGGTGACATCAGTGATCCAGAAGAGCACCATGCTGAAAAGAGCAAGGAACCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CCA 90 bp | GTTGTCCTGCAGGGGTTCCTTGCTCTTTTCAGCATGGTGCTCTTCTaGATCACTGATGTCACCGTCGTCCACCAGGTGACCAAAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VVLQGFLALFSMVLF*ITDVTVVHQVTKGL Trigger: GAGCCCTTTGGTCACCTGGTGGACGACGGTGACATCAGTGATCCAGAAGAGCACCATGCTGAAAAGAGCAAGGAACCCCTGCAGGACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR GCA 90 bp | TTCATAGAATGTACTGTGAAAATGACATCATCCAGCAGGGCAGTGTaGCTGTCCTGCACAGCGTCTGTCCCTGCCTGTGCACAGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: FIECTVKMTSSSRAV*LSCTASVPACAQAP Trigger: GGGTGCCTGTGCACAGGCAGGGACAGACGCTGTGCAGGACAGGCACACTGCCCTGCTGGATGATGTCATTTTCACAGTACATTCTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | CACAATAGTGAATCACTAACATCGCAGGCTAGGCACTCATCCACCTaGAGCCAATGGTCCACAGGAGCCTTGCCTAAGGGACGGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: HNSESLTSQARHSST*SQWSTGALPKGRHC Trigger: ACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGATGAGTGCCTAGCCTGCGATGTTAGTGATTCACTATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | TACTGCTTGTTGGGGTTGAAGTCTAGGTCACGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTATATCTGGCTCATGCTCCGTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: YCLLGLKSRSRTSCP*AFSMQYIWLMLRVS Trigger: GGACACACGGAGCATGAGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAGACTTCAACCCCAACAAGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR TCA 90 bp | GCATGGTGCTCTTCTGGATCACTGATGTCACCGTCGTCCACCAGGTaGCCAAAGGGCTCTGAGGAGATAGATACCATGTTGGACAGGATG | + |
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Preference number: 1 (lower is better) Translates to: AWCSSGSLMSPSSTR*PKGSEEIDTMLDRM Trigger: CATCCTGTCCAACATGGTATCTATCTCCTCAGAGCCCTTTGGTCACCTGGTGGACGACGGTGACATCAGTGATCCAGAAGAGCACCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR TCA 90 bp | CAGTGGGGCAGGGAGCCTGAAAGGAGGAGGCTGTGCGCATCCCACTaGCTTTATTTCAGTTTGCAATCTCATGACAACAGGAAGGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: QWGREPERRRLCASH*LYFSLQSHDNRKVE Trigger: TTCCACCTTCCTGTTGTCATGAGATTGCAAACTGAAATAAAGTCAGTGGGATGCGCACAGCCTCCTCCTTTCAGGCTCCCTGCCCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | CTGTGCTGCTGGTTGCCCATGGTGACTCTACCCATTCCTGACTTCTaGCATGACAGAGACCAGCAAAGGCTAGCTGGCCAGTTTAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LCCWLPMVTLPIPDF*HDRDQQRLAGQFSC Trigger: ACAACTAAACTGGCCAGCTAGCCTTTGCTGGTCTCTGTCATGTCAGAAGTCAGGAATGGGTAGAGTCACCATGGGCAACCAGCAGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | GCACCCTGTCTACTGCCAAGGTGGCTTCTCGAGCATGAGCATGTGTaGGATAGACAAGCAAAGGCTCCAGGGTTCATACAAGAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: APCLLPRWLLEHEHV*DRQAKAPGFIQERS Trigger: TGACCTCTCTTGTATGAACCCTGGAGCCTTTGCTTGTCTATCTCACACATGCTCATGCTCGAGAAGCCACCTTGGCAGTAGACAGGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR GCA 90 bp | AGATGTGACATGGATTTGGTGGCAGGGCCACAGCTGATCAGCCACTaGCCAGAAATAAAAGTGTCTGTTCTCGGGGACCAGTGCATGTGT | + |
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Preference number: 1 (lower is better) Translates to: RCDMDLVAGPQLISH*PEIKVSVLGDQCMC Trigger: ACACATGCACTGGTCCCCGAGAACAGACACTTTTATTTCTGGGCAGTGGCTGATCAGCTGTGGCCCTGCCACCAAATCCATGTCACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | GAAACCAGAAACCAAACAGAGACTGGGCAGCCATCAATTCACACATaGACAGCTGTGTCCAGTAAAGCTCCCGCCCATGCTGAGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: ETRNQTETGQPSIHT*TAVSSKAPAHAEQC Trigger: ACACTGCTCAGCATGGGCGGGAGCTTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGTCTCTGTTTGGTTTCTGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | AGACAGAAGAGTGGCCCTGGCACTGCCGCCCAAGCAGATGCTCTATaGAAGTCTCCAATGAAAACCATTACAGAGAGGAGGATCCAGATA | + |
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Preference number: 1 (lower is better) Translates to: RQKSGPGTAAQADAL*KSPMKTITERRIQI Trigger: TATCTGGATCCTCCTCTCTGTAATGGTTTTCATTGGAGACTTTCATAGAGCATCTGCTTGGGCGGCAGTGCCAGGGCCACTCTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | AAACAAACAAAGAGCCTAATGACTTCCTCAGTGGGGCAGGGAGCCTaGAAGGAGGAGGCTGTGCGCATCCCACTGACTTTATTTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: KQTKSLMTSSVGQGA*KEEAVRIPLTLFQF Trigger: AAACTGAAATAAAGTCAGTGGGATGCGCACAGCCTCCTCCTTTCAGGCTCCCTGCCCCACTGAGGAAGTCATTAGGCTCTTTGTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | AGGGAATCTGTCTGTGAAAGGAATTACCTCGTAGCTGCAGATTTCTaGGAATTTGCCAAGTACCAAGCAGCAGTGCCATGGGCCACTAGA | + |
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Preference number: 1 (lower is better) Translates to: RESVCERNYLVAADF*EFAKYQAAVPWATR Trigger: TCTAGTGGCCCATGGCACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCTGCAGCTACGAGGTAATTCCTTTCACAGACAGATTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR GCA 90 bp | CTGAAAGGAGGAGGCTGTGCGCATCCCACTGACTTTATTTCAGTTTaGAATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LKGGGCAHPTDFISV*NLMTTGRWKHTGEK Trigger: CTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATTGCAAACTGAAATAAAGTCAGTGGGATGCGCACAGCCTCCTCCTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | GACAGCTCTACTATTGACTACCAATCACATGCCATGGATGACCTTTaGTGGAAACATTGCAATTGCAGAGTGTGGCCTGCAGGGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: DSSTIDYQSHAMDDL*WKHCNCRVWPAGRR Trigger: TCTTCTCCCTGCAGGCCACACTCTGCAATTGCAATGTTTCCATCAAAGGTCATCCATGGCATGTGATTGGTAGTCAATAGTAGAGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | TGTGCTGGGCAATTTTATGTCGACTTGACAGAAGCTAGAGGCATCTaGGAGGAGGGAGCATCAACTAAGAAATGTCTCCAGATGATCATG | + |
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Preference number: 1 (lower is better) Translates to: CAGQFYVDLTEARGI*EEGASTKKCLQMIM Trigger: CATGATCATCTGGAGACATTTCTTAGTTGATGCTCCCTCCTCTCAGATGCCTCTAGCTTCTGTCAAGTCGACATAAAATTGCCCAGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | CCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGTaGTGGAGCACAATGTGGAAGTGTAAGTCAGATAAACCCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PSSCPILSSCPDFLK*WSTMWKCKSDKPFP Trigger: AGGAAAGGGTTTATCTGACTTACACTTCCACATTGTGCTCCATCACTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | GTGAATCCCATTTTACTAAATGTGCTGGGCAATTTTATGTCGACTTaGCAGAAGCTAGAGGCATCTGAGAGGAGGGAGCATCAACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: VNPILLNVLGNFMST*QKLEASERREHQLR Trigger: TCTTAGTTGATGCTCCCTCCTCTCAGATGCCTCTAGCTTCTGTCAAGTCGACATAAAATTGCCCAGCACATTTAGTAAAATGGGATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR TCA 90 bp | GGATCACAAAAGAAAGGAGTGAGGACAATGAGGCTACACTGGATTTaGTCCCATCTAGATGATGTCAGATGTAATTCCCAGGACAACAAA | + |
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Preference number: 1 (lower is better) Translates to: GSQKKGVRTMRLHWI*SHLDDVRCNSQDNK Trigger: TTTGTTGTCCTGGGAATTACATCTGACATCATCTAGATGGGATCAAATCCAGTGTAGCCTCATTGTCCTCACTCCTTTCTTTTGTGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
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| 3UTR GCA 90 bp | GAGCCTGAGACAGCAGGGAAGAGTCTGCGGTTTGACAATCTATTCTaGACTGTAAAGATTCATAGAATGTACTGTGAAAATGACATCATC | + |
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Preference number: 1 (lower is better) Translates to: EPETAGKSLRFDNLF*TVKIHRMYCENDII Trigger: GATGATGTCATTTTCACAGTACATTCTATGAATCTTTACAGTGCAGAATAGATTGTCAAACCGCAGACTCTTCCCTGCTGTCTCAGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR CCA 90 bp | CCCACTGACTTTATTTCAGTTTGCAATCTCATGACAACAGGAAGGTaGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: PTDFISVCNLMTTGR*KHTGEKLNFQHPLN Trigger: GTTTAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATTGCAAACTGAAATAAAGTCAGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| 3UTR CAA 90 bp | CATCCTCGGAGGGTCGTGTCACTTGCTGTGGCCACCTGGGTACAGTaGTGGTGTGGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HPRRVVSLAVATWVQ*WCGLHRPAVNFSCP Trigger: GGGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CAA 90 bp | TCTGGCTCATGCTCCGTGTGTCCCATCCTCGGAGGGTCGTGTCACTaGCTGTGGCCACCTGGGTACAGTTGTGGTGTGGGCTCCACCGCC | + |
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Preference number: 2 (lower is better) Translates to: SGSCSVCPILGGSCH*LWPPGYSCGVGSTA Trigger: GGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGGATGGGACACACGGAGCATGAGCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR CAA 90 bp | CAGGCTAGGCACTCATCCACCTGGAGCCAATGGTCCACAGGAGCCTaGCCTAAGGGACGGCACTGTGGGGAGGGCACACCTGTCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: QARHSSTWSQWSTGA*PKGRHCGEGTPVPQ Trigger: CTGTGGGACAGGTGTGCCCTCCCCACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGATGAGTGCCTAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAGTTGTGGTGTGGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCCCCTTCCAGTGTTGCTGAGCTaGCCAGCACAGCCTGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: VQLWCGLHRPAVNFSCPLPVLLS*PAQPGS Trigger: CGAGCCAGGCTGTGCTGGCCAGCTCAGCAACACTGG...AAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTGGGCAGTGCCCACAGGTGAGGGATaGCACTGTGGGGAGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: CLCTGTQIQVQDMNPWAVPTGEG*HCGEGT Trigger: TGTGCCCTCCCCACAGTGCCATCCCTCACCTGTGGG...CACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGGTCCACAGGAGCCTTGCCTAAGGGACGGCACTGTGGGGAGGGCACACCTGACACCTGTCCACAGGTaGGGGATGGCACTGTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NGPQEPCLRDGTVGRAHLTPVHR*GMALWG Trigger: TCCCCACAGTGCCATCCCTCACCTGTGGACAGGTGT...CAGGTGTGCCCTCCCCACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTGGGCAGTGGGGCACCCTGTCTACTaGCAAGGTGGCTTCTCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: CLCTGTQIQVQDMNPWAVGHPVY*QGGFSS Trigger: GCTCGAGAAGCCACCTTGGCAGTAGACAGGGTGCCC...CACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCCGTGTGTCCCAGAACTTCACCTTGCAGTCATCTCCACAGCTGGCGAGGTTCCACCGCCCCGCGGTaGACTTCAGCTGTCCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HSVCPRTSPCSHLHSWRGSTAPR*TSAVPF Trigger: GAAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGA...ACCTCGCCAGCTGTGGAGATGACTGCAAGGTGAAGTTCTGGGACACACGGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCTGTCGCTGCTGCCAGTGAGGACCAGCTGGTCGTGAGAGTGGTTGTAGCGCACACCCAGTGGGAGTaGTCCTCCAGGGTCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: SAVAAASEDQLVVRVVVAHTQWE*SSRVFT Trigger: TGTGAAGACCCTGGAGGAGCACTCCCACTGGGTGTG...CGCTACAACCACTCTCACGACCAGCTGGTCCTCACTGGCAGCAGCGACAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTGGGCAGTGACTGTTGGTGGACTGTaGTGCTGGTTGCCCATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CLCTGTQIQVQDMNPWAVTVGGL*CWLPMV Trigger: CACCATGGGCAACCAGCAGCACAGTCCACCAACAGT...CACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTGTGCTGACAGCATCAGATGAGCTGCTGGCAGAAGCGCCATGTCCCTCAACCTGGGTACAGTTGTaGTGTGGGCTCCACCGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSVLTASDELLAEAPCPSTWVQL*CGLHRP Trigger: GGGGCGGTGGAGCCCACACCACAACTGTACCCAGGT...TGAGGGACATGGCGCTTCTGCCAGCAGCTCATCTGATGCTGTCAGCACACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACTGCCCAGAAATAAAAGTGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGCCAGACCATCGGGGGTaGGGTCACCCCTGGGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLPRNKSVCSRGPVHVFGPDHRG*GHPWAA Trigger: AGCAGCCCAGGGGTGACCCCACCCCCGATGGTCTGG...CCCAAACACATGCACTGGTCCCCGAGAACAGACACTTTTATTTCTGGGCAGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CAA 90 bp | GCTGTGGGACTGGCTGGACCATCCCCCTCTCTTCCATCTCCTCTTTaGACAGGCAGGAAGGCGGGGCATTTGAGTAAGGAAGCAGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: AVGLAGPSPSLPSPL*TGRKAGHLSKEAEP Trigger: AGGCTCTGCTTCCTTACTCAAATGCCCCGCCTTCCTGCCTGTCAAAAGAGGAGATGGAAGAGAGGGGGATGGTCCAGCCAGTCCCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCAAGCAGCAGTGCCATGGGCCACTAGAGCAGTATGTGGTACTTCAGTGCCCTTCCTTCCAGTGTTGCTaGGCTGGCCAGCACAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TKQQCHGPLEQYVVLQCPSFQCC*AGQHSL Trigger: CAGGCTGTGCTGGCCAGCTCAGCAACACTGGAAGGA...AGGGCACTGAAGTACCACATACTGCTCTAGTGGCCCATGGCACTGCTGCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTTAGGGAAGCAAACAGCCATGGGTCAGCTGAGGCCCAGTCCACTGCATACACCGTCGTCCACCAGGTaGCCAAAGGGCTCTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NLGKQTAMGQLRPSPLHTPSSTR*PKGSEE Trigger: CTCCTCAGAGCCCTTTGGTCACCTGGTGGACGACGG...TGTATGCAGTGGACTGGGCCTCAGCTGACCCATGGCTGTTTGCTTCCCTAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CAA 90 bp | AGGCTCCAGGGTTCATACAAGAGAGGTCAGCAGTTCCCAGGGCTCTaGAGGAACTGTTGGTGGACTGTGCTGCTGGTTGCCCATGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: RLQGSYKRGQQFPGL*RNCWWTVLLVAHGD Trigger: GTCACCATGGGCAACCAGCAGCACAGTCCACCAACAGTTCCTCAAGAGCCCTGGGAACTGCTGACCTCTCTTGTATGAACCCTGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGTATGTGGTACTTCAGTGCCCTGGGAACTCTGTTGATAACCAGTCTCCCGTCTGTCGCTGCTGCCAGTaGGGACCAGCTGGTCGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QYVVLQCPGNSVDNQSPVCRCCQ*GPAGRE Trigger: CTCACGACCAGCTGGTCCTCACTGGCAGCAGCGACA...GACGGGAGACTGGTTATCAACAGAGTTCCCAGGGCACTGAAGTACCACATACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACGCAGTGTGCCTGTCCTaGACAGCGTCTGTCCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: CLFSGTSACVWDSSTIDYAVCLS*TASVPA Trigger: GGCAGGGACAGACGCTGTGCAGGACAGGCACACTGC...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTCTATGCAGTATATCTGGCTCATGCTCCGTGTGTCCCATCCTCGGAGGGTCTTGCTGTGGCCACCTaGGTACAGTTGTGGTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLYAVYLAHAPCVPSSEGLAVAT*VQLWCG Trigger: CCCACACCACAACTGTACCCAGGTGGCCACAGCAAG...ACCCTCCGAGGATGGGACACACGGAGCATGAGCCAGATATACTGCATAGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAACAGAGACTGGGCAGCCATCAATTCACACATGGACAGCTGTGTCCAGTAAAAGCAGCTCCAGGGTCTaGGCAGTGCTTGCAGGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: QTETGQPSIHTWTAVSSKSSSRV*AVLAGS Trigger: CGACCCTGCAAGCACTGCTCAGACCCTGGAGCTGCT...TTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGTCTCTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCGTCTGTCCCTGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACTGTGCGCATCCCACTaGCTTTATTTCAGTTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QRLSLPVHRHPDPGPGHELCASH*LYFSLQ Trigger: TTGCAAACTGAAATAAAGTCAGTGGGATGCGCACAG...TTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACCCCACAGGTGAGGGATaGCACTGTGGGGAGGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: CLFSGTSACVWDSSTIDYPTGEG*HCGEGI Trigger: TATGCCCTCCCCACAGTGCCATCCCTCACCTGTGGG...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTACTTCAGTGCCCTGGGAACTCTGTTGATAACCAGTCTCCCGTCGTAACTCGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: VVLQCPGNSVDNQSPVVTRTSCP*AFSMQY Trigger: ATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCG...AGTTACGACGGGAGACTGGTTATCAACAGAGTTCCCAGGGCACTGAAGTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAACAGAGACTGGGCAGCCATCAATTCACACATGGACAGCTGTGTCCAGTAAATATCTGTCCCACAGGTaGGGGATGGCACTGTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QTETGQPSIHTWTAVSSKYLSHR*GMALWG Trigger: TCCCCACAGTGCCATCCCTCACCTGTGGGACAGATA...TTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGTCTCTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACGCTGGTTGCCCATGGTaGCTCTACCCATTCCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: CLFSGTSACVWDSSTIDYAGCPW*LYPFLT Trigger: AGTCAGGAATGGGTAGAGTCACCATGGGCAACCAGC...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGCCTCCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGTCCACAGGTGAGGGATaGCACTGTGGGGAGGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: LLPPSSCPILSSCPDFLKSTGEG*HCGEGI Trigger: TATGCCCTCCCCACAGTGCCATCCCTCACCTGTGGA...CTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACGGTGGACTGTGCTGCTaGTTGCCCATGGTGACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: CLFSGTSACVWDSSTIDYGGLCC*LPMVTL Trigger: TAGAGTCACCATGGGCAACCAGCAGCACAGTCCACC...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCGTAGCTGCAGATTTCTGAGAATTTGCCAAGTACCAAGCAGCAGTGCCATGTACCTGTCCCACAGGTaGGGGATGGCACTGTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PRSCRFLRICQVPSSSAMYLSHR*GMALCF Trigger: AAAACACAGTGCCATCCCTCACCTGTGGGACAGGTA...CATGGCACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCTGCAGCTACGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCATTTGAGTAAGGAAGCAGAGCCTGCAGGAAAAGATGGGCACCCTGTCTACCTGCCTCCAAGTTCCTaGCCTATTTTGAGTTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GHLSKEAEPAGKDGHPVYLPPSS*PILSSC Trigger: ACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAG...GTAGACAGGGTGCCCATCTTTTCCTGCAGGCTCTGCTTCCTTACTCAAATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGACTACAGATATGTATATCATACCTGAACCCGAAATCTGTTTCTACTTGGAGGGGTGGGGTCACCCCTaGGCTGCTGGTCCTGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: GTTDMYIIPEPEICFYLEGWGHP*AAGPGF Trigger: GAATCCAGGACCAGCAGCCCAGGGGTGACCCCACCC...CTCCAAGTAGAAACAGATTTCGGGTTCAGGTATGATATACATATCTGTAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAACAGAAACTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: RWKHTGEKLNFQHPLNRNWLELG*RSHSRM Trigger: CATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCA...GTTTCTGTTTAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATTCCACAGGTGAGGGATaGCACTGTGGGGAGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: NPCKSYCSASNKVRKTGYSTGEG*HCGEGT Trigger: TGTGCCCTCCCCACAGTGCCATCCCTCACCTGTGGA...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACTACAGATATGTATATCATACCTGAACCCGAAATCTGTTTCTACTTGGAGACTCCTGTCCACAGGTaGGGGATGGCACTGTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GTTDMYIIPEPEICFYLETPVHR*GMALWG Trigger: TCCCCACAGTGCCATCCCTCACCTGTGGACAGGAGT...CTCCAAGTAGAAACAGATTTCGGGTTCAGGTATGATATACATATCTGTAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGGATCACAAAAGAAAGGAGTGAGGACAATGAGGCTACACTGGATTTGATCCTAGCATGGGAGTTCTaGATACCCAGGAAGGCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GRITKERSEDNEATLDLILAWEF*IPRKAL Trigger: CAGCGCCTTCCTGGGTATCCAGAACTCCCATGCTAG...GATCAAATCCAGTGTAGCCTCATTGTCCTCACTCCTTTCTTTTGTGATCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAAACAGAAACCAGAAACCAAACAGAGACTGGGCAGCCATCAATTCACACATGTCCACCTGGAGCCAATaGTCCACAGGAGCCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LNRNQKPNRDWAAINSHMSTWSQ*STGALP Trigger: AGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGA...CATGTGTGAATTGATGGCTGCCCAGTCTCTGTTTGGTTTCTGGTTTCTGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATAGGCACTCATCCACCTaGAGCCAATGGTCCACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NPCKSYCSASNKVRKTGYRHSST*SQWSTG Trigger: TCCTGTGGACCATTGGCTCCAGGTGGATGAGTGCCT...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTACAGGAAGAGGAAGCCATGAAGCCTCCAAAGTACTAGACAGTGTACAACTGGGCTGCTGGTCCTaGATTCTATTAGAAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSTGRGSHEASKVLDSVQLGCWS*ILLESR Trigger: TCTGCTTTCTAATAGAATCCAGGACCAGCAGCCCAG...TTGTACACTGTCTAGTACTTTGGAGGCTTCATGGCTTCCTCTTCCTGTAGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAATATCGGCCAGGGAAATaGCCTTCTTCCCATCCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: NLMTTGRWKHTGEKLNFQYRPGK*PSSHPP Trigger: TGGGGGATGGGAAGAAGGTCATTTCCCTGGCCGATA...TTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR TCA 90 bp | GATAGGGTCTCACCATATATCCCAGGCTGGCCTCAAACTCACAGCAATCCTCCTTTTAGTTGTACAATCTaGAACAAGTATGCCCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DRVSPYIPGWPQTHSNPPFSCTI*NKYAPQ Trigger: CTGTGGGGCATACTTGTTTCAGATTGTACAACTAAA...AGGAGGATTGCTGTGAGTTTGAGGCCAGCCTGGGATATATGGTGAGACCCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTATCGTGTCACTTGCTGTaGCCACCTGGGTACAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TTGRWKHTGEKLNFQHPLSCHLL*PPGYSC Trigger: ACAACTGTACCCAGGTGGCCACAGCAAGTGACACGA...TAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGCCTCCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGCCTTTCCTTTCCATTTaGTTTTTGGCCAGGGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLPPSSCPILSSCPDFLKPFLSI*FLARVF Trigger: AAACACCCTGGCCAAAAAGCAAATGGAAAGGAAAGG...CTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCTACAGGAAGAGGAAGCCATGAAGCCTCCAAAGTACTAGACAGTGTACAACCATCAATTCACACATaGACAGCTGTGTCCAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: GSTGRGSHEASKVLDSVQPSIHT*TAVSSK Trigger: TTTACTGGACACAGCTGTCCATGTGTGAATTGATGG...TTGTACACTGTCTAGTACTTTGGAGGCTTCATGGCTTCCTCTTCCTGTAGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCCAGGACAACAAAGAATAGACAAGAATATTCTTGTAGGAATAGAGGAGTGTACCCAGGAAGGCGCTaGGAATGGCAGAAGTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: IPRTTKNRQEYSCRNRGVYPGRR*EWQKSP Trigger: TGGAGACTTCTGCCATTCTCAGCGCCTTCCTGGGTA...CACTCCTCTATTCCTACAAGAATATTCTTGTCTATTCTTTGTTGTCCTGGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTACAGGAAGAGGAAGCCATGAAGCCTCCAAAGTACTAGACAGTGTACAAAGATTTCTGAGAATTTaGCAAGTACCAAGCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GSTGRGSHEASKVLDSVQRFLRI*QVPSSS Trigger: ACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCT...TTGTACACTGTCTAGTACTTTGGAGGCTTCATGGCTTCCTCTTCCTGTAGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATGTAGCTGCAGATTTCTaGGAATTTGCCAAGTACCAA | + |
|
Preference number: 2 (lower is better) Translates to: NPCKSYCSASNKVRKTGYVAADF*EFAKYQ Trigger: TTGGTACTTGGCAAATTCTCAGAAATCTGCAGCTAC...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATCTACTTCAGGATGAGTaGTGGGACTACAGATATGTA | + |
|
Preference number: 2 (lower is better) Translates to: NPCKSYCSASNKVRKTGYLLQDE*WDYRYV Trigger: TACATATCTGTAGTCCCAGCACTCATCCTGAAGTAG...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAGATTTCTGAGAATTTaGCAAGTACCAAGCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TTGRWKHTGEKLNFQHPLRFLRI*QVPSSS Trigger: ACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCT...TAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATGACTTTATTTCAGTTTaGAATCTCATGACAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NPCKSYCSASNKVRKTGYDFISV*NLMTTG Trigger: TCCTGTTGTCATGAGATTGCAAACTGAAATAAAGTC...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | GCTGAGCTGGCCAGCACAGCCTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AELASTAWLELG*RSHSRMWLSAR Trigger: CCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCTGGCCAGCTCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | CATCCTCGGAGGGTCGTGTCACTTGCTGTGGCCACCTaGGTACAGTTGTGGTGTGGGCTCCACCGCCCCGCG | + |
|
Preference number: 3 (lower is better) Translates to: HPRRVVSLAVAT*VQLWCGLHRPA Trigger: CGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGACCCTCCGAGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | GTCACTTGCTGTGGCCACCTGGGTACAGTTGTGGTGTaGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTCCGHLGTVVV*APPPRGELQLS Trigger: GGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | GTCGTGTCACTTGCTGTGGCCACCTGGGTACAGTTGTaGTGTGGGCTCCACCGCCCCGCGGTGAACTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVSLAVATWVQL*CGLHRPAVNFS Trigger: GCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTACCCAGGTGGCCACAGCAAGTGACACGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | ACTGTGGGGAGGGCACTCCTGTCCACAGGTGAGGGATaGCACTGTGGGGAGGGCATACCTGTCCCACAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVGRALLSTGEG*HCGEGIPVPQV Trigger: CACCTGTGGGACAGGTATGCCCTCCCCACAGTGCCATCCCTCACCTGTGGACAGGAGTGCCCTCCCCACAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGGATGACTCTGCTGTCGCTGCTGCCAGTGAGGACCAGCTGGTCGTGAGAGGGTCTGAGCAGTGCTaGCAGGGTCGTCAGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: GQDDSAVAAASEDQLVVRGSEQC*QGRQGT Trigger: AGTCCCCTGACGACCCTGCAAGCACTGCTCAGACCC...TCTCACGACCAGCTGGTCCTCACTGGCAGCAGCGACAGCAGAGTCATCCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR TCA 72 bp | GAATGGCACTGTGGAGAGGGCACACCTGTCCACAGGTaGGGGATGGCACTGTGGGGAGGGCACACCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EWHCGEGTPVHR*GMALWGGHTSL Trigger: GAGACTGGTGTGCCCTCCCCACAGTGCCATCCCTCACCTGTGGACAGGTGTGCCCTCTCCACAGTGCCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | ACTCATCCACCTGGAGCCAATGGTCCACAGGAGCCTTaGCTAAGGGACGGCACTGTGGGGAGGGCACACCTG | + |
|
Preference number: 3 (lower is better) Translates to: THPPGANGPQEP*LRDGTVGRAHL Trigger: CAGGTGTGCCCTCCCCACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGATGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | CCCGCCCATGCTGAGCAGTGTGCTGACAGCATCAGATaGGCTGCTGGCAGAAGCGCCATGTCCCTCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PAHAEQCADSIR*AAGRSAMSLRA Trigger: AGCTCTGAGGGACATGGCGCTTCTGCCAGCAGCTCATCTGATGCTGTCAGCACACTGCTCAGCATGGGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | CATCCCCCATCGGTTCCCACACGACACAGGCCACGTTaGCTTGGGCCGAGTTGTCAAGGTGACAGAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HPPSVPTRHRPR*LGPSCQGDRAA Trigger: AGCTGCTCTGTCACCTTGACAACTCGGCCCAAGGCAACGTGGCCTGTGTCGTGTGGGAACCGATGGGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR GCA 72 bp | AGTGTGCCTGTCCTGCACAGCGTCTGTCCCTGCCTGTaGACAGGCACCCAGATCCAGGTCCAGGACATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SVPVLHSVCPCL*TGTQIQVQDMN Trigger: GTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTGTGCAGGACAGGCACACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | TGGCTCGAGCTGGGCTGGAGGTCCCACAGCAGGATGTaGCTATCGGCCAGGGAAATGACCTTCTTCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: WLELGWRSHSRM*LSAREMTFFPS Trigger: GGATGGGAAGAAGGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR GCA 72 bp | AAAATGACATCATCCAGCAGGGCAGTGTGCCTGTCCTaGACAGCGTCTGTCCCTGCCTGTGCACAGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: KMTSSSRAVCLS*TASVPACAQAP Trigger: GGGTGCCTGTGCACAGGCAGGGACAGACGCTGTGCAGGACAGGCACACTGCCCTGCTGGATGATGTCATTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | GGTCAGCAGTTCCCAGGGCTCTTGAGGAACTGTTGGTaGACTGTGCTGCTGGTTGCCCATGGTGACTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: GQQFPGLLRNCW*TVLLVAHGDST Trigger: GGTAGAGTCACCATGGGCAACCAGCAGCACAGTCCACCAACAGTTCCTCAAGAGCCCTGGGAACTGCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | AGTGGGAGTGCTCCTCCAGGGTCTTCACAGGCTCGGTaGCATTCCGTGTGTCCCAGAACTTCACCTTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SGSAPPGSSQAR*HSVCPRTSPCS Trigger: ACTGCAAGGTGAAGTTCTGGGACACACGGAATGTCACCGAGCCTGTGAAGACCCTGGAGGAGCACTCCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR GCA 72 bp | GCAGAGCCTGCAGGAAAAGATGGGCACCCTGTCTACTaGCAAGGTGGCTTCTCGAGCATGAGCATGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AEPAGKDGHPVY*QGGFSSMSMCE Trigger: CTCACACATGCTCATGCTCGAGAAGCCACCTTGGCAGTAGACAGGGTGCCCATCTTTTCCTGCAGGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | GCCTGCAGGGAGAAGACAGAAGAGTGGCCCTGGCACTaGCGCCCAAGCAGATGCTCTATGAAAGTCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ACREKTEEWPWH*RPSRCSMKVSN Trigger: ATTGGAGACTTTCATAGAGCATCTGCTTGGGCGGCAGTGCCAGGGCCACTCTTCTGTCTTCTCCCTGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAGAACTTCACCTTGCAGTCATCTCCACAGCTGGCGAGGTAATACTGCTTACGACACAGGCCACGTaGCCTTGGGCCGAGTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VPELHLAVISTAGEVILLTTQAT*PWAELS Trigger: TGACAACTCGGCCCAAGGCAACGTGGCCTGTGTCGT...AAGCAGTATTACCTCGCCAGCTGTGGAGATGACTGCAAGGTGAAGTTCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR TCA 72 bp | AAGAGCCTAATGACTTCCTCAGTGGGGCAGGGAGCCTaGAAGGAGGAGGCTGTGCGCATCCCACTGACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KSLMTSSVGQGA*KEEAVRIPLTL Trigger: TAAAGTCAGTGGGATGCGCACAGCCTCCTCCTTTCAGGCTCCCTGCCCCACTGAGGAAGTCATTAGGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | GTTCATACAAGAGAGGTCAGCAGTTCCCAGGGCTCTTaGGGAACTGTTGGTGGACTGTGCTGCTGGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VHTREVSSSQGS*GTVGGLCCWLP Trigger: GGGCAACCAGCAGCACAGTCCACCAACAGTTCCTCAAGAGCCCTGGGAACTGCTGACCTCTCTTGTATGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | CTAGGTCACGCACCAGCTGCCCATGAGCGTTCTCTATaGAGTATATCTGGCTCATGCTCCGTGTGTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LGHAPAAHERSL*SISGSCSVCPI Trigger: GATGGGACACACGGAGCATGAGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | CAGGGGTTCCTTGCTCTTTTCAGCATGGTGCTCTTCTaGATCACTGATGTCACCGTCGTCCACCAGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QGFLALFSMVLF*ITDVTVVHQVT Trigger: GGTCACCTGGTGGACGACGGTGACATCAGTGATCCAGAAGAGCACCATGCTGAAAAGAGCAAGGAACCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR CCA 72 bp | GAATCACTAACATCGCAGGCTAGGCACTCATCCACCTaGAGCCAATGGTCCACAGGAGCCTTGCCTAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESLTSQARHSST*SQWSTGALPKG Trigger: TCCCTTAGGCAAGGCTCCTGTGGACCATTGGCTCCAGGTGGATGAGTGCCTAGCCTGCGATGTTAGTGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | ACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTaGGCAGTGCTCCACTTCCCAGGTATACAGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: TGTQIQVQDMNP*AVLHFPGIQIC Trigger: ACATATCTGTATACCTGGGAAGTGGAGCACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGCAGCAGTGCCATGGGCCACTAGAGCAGTATGTGGTACTTCAGTGCCCTTACTGCTTGTTGGGGTaGAAGTCTAGGTCACGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TKQQCHGPLEQYVVLQCPYCLLG*KSRSRT Trigger: GGTGCGTGACCTAGACTTCAACCCCAACAAGCAGTA...AGGGCACTGAAGTACCACATACTGCTCTAGTGGCCCATGGCACTGCTGCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR TCA 72 bp | TGGTTGCCCATGGTGACTCTACCCATTCCTGACTTCTaGCATGACAGAGACCAGCAAAGGCTAGCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WLPMVTLPIPDF*HDRDQQRLAGQ Trigger: CTGGCCAGCTAGCCTTTGCTGGTCTCTGTCATGTCAGAAGTCAGGAATGGGTAGAGTCACCATGGGCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | TGCCATGGGCCACTAGAGCAGTATGTGGTACTTCAGTaGCCTGGGAACTCTGTTGATAACCAGTCTCCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: CHGPLEQYVVLQ*PGNSVDNQSPV Trigger: GACGGGAGACTGGTTATCAACAGAGTTCCCAGGGCACTGAAGTACCACATACTGCTCTAGTGGCCCATGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR GCA 72 bp | ATGGATTTGGTGGCAGGGCCACAGCTGATCAGCCACTaGCCAGAAATAAAAGTGTCTGTTCTCGGGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: MDLVAGPQLISH*PEIKVSVLGDQ Trigger: CTGGTCCCCGAGAACAGACACTTTTATTTCTGGGCAGTGGCTGATCAGCTGTGGCCCTGCCACCAAATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | TTGGGGTTGAAGTCTAGGTCACGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTATATCTGGCTCATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGLKSRSRTSCP*AFSMQYIWLML Trigger: GAGCATGAGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAGACTTCAACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR TCA 72 bp | GAACTGTTGGTGGACTGTGCTGCTGGTTGCCCATGGTaGCTCTACCCATTCCTGACTTCTGACATGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ELLVDCAAGCPW*LYPFLTSDMTE Trigger: CTCTGTCATGTCAGAAGTCAGGAATGGGTAGAGTCACCATGGGCAACCAGCAGCACAGTCCACCAACAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | AGTGGCCCTGGCACTGCCGCCCAAGCAGATGCTCTATaGAAGTCTCCAATGAAAACCATTACAGAGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGPGTAAQADAL*KSPMKTITERR Trigger: CCTCCTCTCTGTAATGGTTTTCATTGGAGACTTTCATAGAGCATCTGCTTGGGCGGCAGTGCCAGGGCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | GAACCCGAAATCTGTTTCTACTTGGAGCAGCCCCAGTaGACCTGGAAGGGTCAGAAGACACACCCAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: EPEICFYLEQPQ*TWKGQKTHPEL Trigger: GAGTTCTGGGTGTGTCTTCTGACCCTTCCAGGTTCACTGGGGCTGCTCCAAGTAGAAACAGATTTCGGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | AACCAAACAGAGACTGGGCAGCCATCAATTCACACATaGACAGCTGTGTCCAGTAAAGCTCCCGCCCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NQTETGQPSIHT*TAVSSKAPAHA Trigger: AGCATGGGCGGGAGCTTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGTCTCTGTTTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACCAGTTCCCAGGGCTCTaGAGGAACTGTTGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CLFSGTSACVWDSSTIDYQFPGL*RNCWWT Trigger: AGTCCACCAACAGTTCCTCAAGAGCCCTGGGAACTG...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAAGCCACCTGGGTACAGTaGTGGTGTGGGCTCCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: NLMTTGRWKHTGEKLNFQATWVQ*WCGLHR Trigger: GCGGTGGAGCCCACACCACAACTGTACCCAGGTGGC...TTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR TCA 72 bp | TCTTCTGGATCACTGATGTCACCGTCGTCCACCAGGTaGCCAAAGGGCTCTGAGGAGATAGATACCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSGSLMSPSSTR*PKGSEEIDTML Trigger: CAACATGGTATCTATCTCCTCAGAGCCCTTTGGTCACCTGGTGGACGACGGTGACATCAGTGATCCAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| 3UTR-3UTR CAA 90 bp | GATAGGGTCTCACCATATATCCCAGGCTGGCCTCAAACTCACAGCAATCCTCCTAGTTCCTGCCCTATTTaGAGTTCCTGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRVSPYIPGWPQTHSNPPSSCPI*SSCPDF Trigger: GAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACT...AGGAGGATTGCTGTGAGTTTGAGGCCAGCCTGGGATATATGGTGAGACCCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACATGGAAACATTGCAATaGCAGAGTGTGGCCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLFSGTSACVWDSSTIDYMETLQ*QSVACR Trigger: CCTGCAGGCCACACTCTGCAATTGCAATGTTTCCAT...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | AGGGAGCCTGAAAGGAGGAGGCTGTGCGCATCCCACTaGCTTTATTTCAGTTTGCAATCTCATGACAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: REPERRRLCASH*LYFSLQSHDNR Trigger: CCTGTTGTCATGAGATTGCAAACTGAAATAAAGTCAGTGGGATGCGCACAGCCTCCTCCTTTCAGGCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | CTACTGCCAAGGTGGCTTCTCGAGCATGAGCATGTGTaGGATAGACAAGCAAAGGCTCCAGGGTTCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: LLPRWLLEHEHV*DRQAKAPGFIQ Trigger: TTGTATGAACCCTGGAGCCTTTGCTTGTCTATCTCACACATGCTCATGCTCGAGAAGCCACCTTGGCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | ACAGAAGAGTGGCCCTGGCACTGCCGCCCAAGCAGATaGTCTATGAAAGTCTCCAATGAAAACCATTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEEWPWHCRPSR*SMKVSNENHYR Trigger: TCTGTAATGGTTTTCATTGGAGACTTTCATAGAGCATCTGCTTGGGCGGCAGTGCCAGGGCCACTCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGACTACAGATATGTATATCATACCTGAACCCGAAATCTGTTTCTACTTGGAGTGGTCCACAGGAGCCTaGCCTAAGGGACGGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GTTDMYIIPEPEICFYLEWSTGA*PKGRHC Trigger: ACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCA...CTCCAAGTAGAAACAGATTTCGGGTTCAGGTATGATATACATATCTGTAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | TGCATCAGCTTCTGCCTCCAAGTTCCTGCCCTATTTTaGGTTCCTGTCCTGACTTCCTTAAGTGATGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CISFCLQVPALF*VPVLTSLSDGA Trigger: TGCTCCATCACTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAGCTGATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | CCAGGTATACAGATATGTCAGGTTAGGGCTTCAGACTaGTGCAGAAGTCTGATAGACAAGCTGTGGGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGIQICQVRASD*CRSLIDKLWDW Trigger: CCAGTCCCACAGCTTGTCTATCAGACTTCTGCATCAGTCTGAAGCCCTAACCTGACATATCTGTATACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | GTCTGTGAAAGGAATTACCTCGTAGCTGCAGATTTCTaGGAATTTGCCAAGTACCAAGCAGCAGTGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: VCERNYLVAADF*EFAKYQAAVPW Trigger: CCATGGCACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCTGCAGCTACGAGGTAATTCCTTTCACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | GGAGGCTGTGCGCATCCCACTGACTTTATTTCAGTTTaGAATCTCATGACAACAGGAAGGTGGAAACACACT | + |
|
Preference number: 3 (lower is better) Translates to: GGCAHPTDFISV*NLMTTGRWKHT Trigger: AGTGTGTTTCCACCTTCCTGTTGTCATGAGATTGCAAACTGAAATAAAGTCAGTGGGATGCGCACAGCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | TGTATATCATACCTGAACCCGAAATCTGTTTCTACTTaGAGCAGCCCCAGTGAACCTGGAAGGGTCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CISYLNPKSVST*SSPSEPGRVRR Trigger: TCTTCTGACCCTTCCAGGTTCACTGGGGCTGCTCCAAGTAGAAACAGATTTCGGGTTCAGGTATGATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | GAGAGGAGGGAGCATCAACTAAGAAATGTCTCCAGATaGTCATGCTGTGGGCAAGCCTATAAGGCATTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ERREHQLRNVSR*SCCGQAYKAFS Trigger: AGAAAATGCCTTATAGGCTTGCCCACAGCATGATCATCTGGAGACATTTCTTAGTTGATGCTCCCTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | TGGCCTCAAACTCACAGCAATCCTCCTACTTCAGGATaGGTGCTGGGACTACAGATATGTATATCATACCTG | + |
|
Preference number: 3 (lower is better) Translates to: WPQTHSNPPTSG*VLGLQICISYL Trigger: CAGGTATGATATACATATCTGTAGTCCCAGCACTCATCCTGAAGTAGGAGGATTGCTGTGAGTTTGAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR TCA 72 bp | AAGAAAGGAGTGAGGACAATGAGGCTACACTGGATTTaGTCCCATCTAGATGATGTCAGATGTAATTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KKGVRTMRLHWI*SHLDDVRCNSQ Trigger: CTGGGAATTACATCTGACATCATCTAGATGGGATCAAATCCAGTGTAGCCTCATTGTCCTCACTCCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
||
| 3UTR TCA 72 bp | TGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGTaGTGGAGCACAATGTGGAAGTGTAAGTCAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CPILSSCPDFLK*WSTMWKCKSDK Trigger: TTTATCTGACTTACACTTCCACATTGTGCTCCATCACTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR GCA 72 bp | ACAGCAGGGAAGAGTCTGCGGTTTGACAATCTATTCTaGACTGTAAAGATTCATAGAATGTACTGTGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TAGKSLRFDNLF*TVKIHRMYCEN Trigger: ATTTTCACAGTACATTCTATGAATCTTTACAGTGCAGAATAGATTGTCAAACCGCAGACTCTTCCCTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CCA 72 bp | TTTATTTCAGTTTGCAATCTCATGACAACAGGAAGGTaGAAACACACTGGGGAAAAGTTAAACTTCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: FISVCNLMTTGR*KHTGEKLNFQH Trigger: GTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATTGCAAACTGAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGGGATGGCACTGTGGGGAGGGCATACCTGTCCCACAGGTGAGGGATGGCAGCAGCTCCAGGGTCTaGGCAGTGCTTGCAGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GEGWHCGEGIPVPQVRDGSSSRV*AVLAGS Trigger: CGACCCTGCAAGCACTGCTCAGACCCTGGAGCTGCT...GCCATCCCTCACCTGTGGGACAGGTATGCCCTCCCCACAGTGCCATCCCTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCGAGCTGGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGACTTGCTGGCAGAAGCTaGGACCAGCTGCTTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LARAGLEVPQQDVAIGQGLAGRS*DQLLHA Trigger: AGCATGAAGCAGCTGGTCTCAGCTTCTGCCAGCAAG...TCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGTCTGTCCCTGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCAGTGTTGCTGAGCTaGCCAGCACAGCCTGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QRLSLPVHRHPDPGPGHEPVLLS*PAQPGS Trigger: CGAGCCAGGCTGTGCTGGCCAGCTCAGCAACACTGG...TTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCACAGGTGAGGGATGGCACTGTGGGGAGGGCATACCTGTCCCACAGACCTGGGTACAGTTGTaGTGTGGGCTCCACCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ICPTGEGWHCGEGIPVPQTWVQL*CGLHRP Trigger: GGGGCGGTGGAGCCCACACCACAACTGTACCCAGGT...CTGTGGGACAGGTATGCCCTCCCCACAGTGCCATCCCTCACCTGTGGGACAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CAA 72 bp | CCCCATCGGTTCCCACACGACACAGGCCACGTTGCCTaGGGCCGAGTTGTCAAGGTGACAGAGCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHRFPHDTGHVA*GRVVKVTEQLQ Trigger: CTGGAGCTGCTCTGTCACCTTGACAACTCGGCCCAAGGCAACGTGGCCTGTGTCGTGTGGGAACCGATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGATGGCACTGTGGGGAGGGCATACCTGTCCCACAGGTGAGGGATGGCTCCCACAGCAGGATGTaGCTATCGGCCAGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GEGWHCGEGIPVPQVRDGSHSRM*LSAREM Trigger: CATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGA...GCCATCCCTCACCTGTGGGACAGGTATGCCCTCCCCACAGTGCCATCCCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGTGCTGACAGCATCAGATGAGCTGCTGGCAGAAGCGCCATGTCCCTCACCGTCGTCCACCAGGTaGCCAAAGGGCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVLTASDELLAEAPCPSPSSTR*PKGSEE Trigger: CTCCTCAGAGCCCTTTGGTCACCTGGTGGACGACGG...TGAGGGACATGGCGCTTCTGCCAGCAGCTCATCTGATGCTGTCAGCACACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGCAGGAAGGCGGGGCATTTGAGTAAGGAAGCAGAGCCTGCAGGAAAAGATCAGCCTGGCTCGAGCTaGGCTGGAGGTCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGRKAGHLSKEAEPAGKDQPGSS*AGGPTA Trigger: TGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTG...ATCTTTTCCTGCAGGCTCTGCTTCCTTACTCAAATGCCCCGCCTTCCTGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGGATGACTCTGCTGTCGCTGCTGCCAGTGAGGACCAGCTGGTCGTGAGATGTAGCTTGATTGAGTaGAGGCATGCTGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQDDSAVAAASEDQLVVRCSLIE*RHAAAS Trigger: GGAGGCTGCAGCATGCCTTCACTCAATCAAGCTACA...TCTCACGACCAGCTGGTCCTCACTGGCAGCAGCGACAGCAGAGTCATCCTGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGCTCGAGCTGGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCACAACCAAGAAGCGAATaGCATCTGTTTCCGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPGSSWAGGPTAGCGYRPQPRSE*HLFPQF Trigger: AAACTGCGGAAACAGATGCCATTCGCTTCTTGGTTG...TGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR TCA 90 bp | TGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAACCCCTGGGCAGTGCAGATCTCACCCGCTTaGTGGAGGAGGACATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTGTQIQVQDMNPWAVQISPA*WRRTFL Trigger: TAAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTG...CACTGCCCAGGGGTTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGTGCTGACAGCATCAGATGAGCTGCTGGCAGAAGCGCCATGTCCCTCACCTGCAGGGGTTCCTTaGTCTTTTCAGCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVLTASDELLAEAPCPSPAGVP*SFQHGA Trigger: AGCACCATGCTGAAAAGAGCAAGGAACCCCTGCAGG...TGAGGGACATGGCGCTTCTGCCAGCAGCTCATCTGATGCTGTCAGCACACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLFSGTSACVWDSSTIDYWLELG*RSHSRM Trigger: CATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCA...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTTCTGGATACCCAGGAAGGCGCTGAGAATGGCAGAAGTCTCCAGTGAGATCATGGTCCAGGTCTaGAGAACTCCCTGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WEFWIPRKALRMAEVSSEIMVQV*RTPWEM Trigger: CATCTCCCAGGGAGTTCTTCAGACCTGGACCATGAT...CTCACTGGAGACTTCTGCCATTCTCAGCGCCTTCCTGGGTATCCAGAACTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
||
| CDS-3UTR GCA 90 bp | GATAGGGTCTCACCATATATCCCAGGCTGGCCTCAAACTCACAGCAATCCTCCTCACACCCAGTGGGAGTaGTCCTCCAGGGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DRVSPYIPGWPQTHSNPPHTQWE*SSRVFT Trigger: TGTGAAGACCCTGGAGGAGCACTCCCACTGGGTGTG...AGGAGGATTGCTGTGAGTTTGAGGCCAGCCTGGGATATATGGTGAGACCCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTGTAGCGCACACTCCACACCCAGTGGGAGTGCTCCTCCAGGGTCTTCACTTTTGTTGTAGCAGGTaGCCAGCACACCTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVVAHTPHPVGVLLQGLHFCCSR*PAHLYL Trigger: CAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAA...GTGAAGACCCTGGAGGAGCACTCCCACTGGGTGTGGAGTGTGCGCTACAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCACAGGTGAGGGATGGCACTGTGGGGAGGGCATACCTGTCCCACAGTTTTGTTGTAGCAGGTaGCCAGCACACCTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICPTGEGWHCGEGIPVPQFCCSR*PAHLYL Trigger: CAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAA...CTGTGGGACAGGTATGCCCTCCCCACAGTGCCATCCCTCACCTGTGGGACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCTACAGGAAGAGGAAGCCATGAAGCCTCCAAAGTACTAGACAGTGTACAATCCTTCCAGTGTTGCTaGGCTGGCCAGCACAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSTGRGSHEASKVLDSVQSFQCC*AGQHSL Trigger: CAGGCTGTGCTGGCCAGCTCAGCAACACTGGAAGGA...TTGTACACTGTCTAGTACTTTGGAGGCTTCATGGCTTCCTCTTCCTGTAGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTACTTCAGTGCCCTGGGAACTCTGTTGATAACCAGTCTCCCGTCGTAACTAGCACCCACACTTGCTaGCAGAAGCTGAGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVLQCPGNSVDNQSPVVTSTHTC*QKLRPA Trigger: AGCTGGTCTCAGCTTCTGCCAGCAAGTGTGGGTGCT...AGTTACGACGGGAGACTGGTTATCAACAGAGTTCCCAGGGCACTGAAGTACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCAGAGTGAACAAGCCTGCAAGGCCTCTGCATCAGCTTCTGCCTCCAAGTCGTCAGGGGACTCGTaGCTACCGGATTCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKQSEQACKASASASASKSSGDS*LPDSNS Trigger: GGAATTAGAATCCGGTAGCCACGAGTCCCCTGACGA...CTTGGAGGCAGAAGCTGATGCAGAGGCCTTGCAGGCTTGTTCACTCTGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | GTACAGTTGTGGTGTGGGCTCCACCGCCCCGCGGTGAACTTCAGCTGTCCCCTTCGTCATCAAAGTCTATaGTGTGGATCTGATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQLWCGLHRPAVNFSCPLRHQSL*CGSDYH Trigger: ATGATAATCAGATCCACATCATAGACTTTGATGACG...AAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGAGCCCACACCACAACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR TCA 90 bp | ACTGGGCAGCCATCAATTCACACATGGACAGCTGTGTCCAGTAAAGCTCCCGCCCAGATCTCACCCGCTTaGTGGAGGAGGACATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGQPSIHTWTAVSSKAPAQISPA*WRRTFL Trigger: TAAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTG...GGCGGGAGCTTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAACAGAAACTCCACCGCCCCGCGGTaGACTTCAGCTGTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWKHTGEKLNFQHPLNRNSTAPR*TSAVPF Trigger: GAAGGGGACAGCTGAAGTTCACCGCGGGGCGGTGGA...GTTTCTGTTTAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | GAACTTCACCTTGCAGTCATCTCCACAGCTGGCGAGGTAATACTGCTTGTTGGGCGGATTCTAATTCCTTaGGCATCCTCCACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELHLAVISTAGEVILLVGRILIP*ASSTQL Trigger: CAGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCG...CCCAACAAGCAGTATTACCTCGCCAGCTGTGGAGATGACTGCAAGGTGAAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR TCA 90 bp | AATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAATGTCGCTGCTGCCAGTaGGGACCAGCTGGTCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLMTTGRWKHTGEKLNFQCRCCQ*GPAGRE Trigger: CTCACGACCAGCTGGTCCTCACTGGCAGCAGCGACA...TTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGAGACTGGGCAGCCATCAATTCACACATGGACAGCTGTGTCCAGTAAAGCCCAGAACTTCACCTTaGAGTCATCTCCACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRLGSHQFTHGQLCPVKPRTSP*SHLHSW Trigger: CCAGCTGTGGAGATGACTGCAAGGTGAAGTTCTGGG...CTTTACTGGACACAGCTGTCCATGTGTGAATTGATGGCTGCCCAGTCTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | GATAGGGTCTCACCATATATCCCAGGCTGGCCTCAAACTCACAGCAATCCTCCTGCAATAACGTTGTCCTaGAGGGGTTCCTTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRVSPYIPGWPQTHSNPPAITLS*RGSLLF Trigger: AAAGAGCAAGGAACCCCTGCAGGACAACGTTATTGC...AGGAGGATTGCTGTGAGTTTGAGGCCAGCCTGGGATATATGGTGAGACCCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACCGGATTCTAATTCCTTaGGCATCCTCCACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLFSGTSACVWDSSTIDYRILIP*ASSTQL Trigger: CAGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCG...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGCAGGAAGGCGGGGCATTTGAGTAAGGAAGCAGAGCCTGCAGGAAAAGATTTGCTCTTTTCAGCATaGTGCTCTTCTGGATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRKAGHLSKEAEPAGKDLLFSA*CSSGSL Trigger: CAGTGATCCAGAAGAGCACCATGCTGAAAAGAGCAA...ATCTTTTCCTGCAGGCTCTGCTTCCTTACTCAAATGCCCCGCCTTCCTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAACAGAAACACACTCCACACCCAGTaGGAGTGCTCCTCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RWKHTGEKLNFQHPLNRNTLHTQ*ECSSRV Trigger: GACCCTGGAGGAGCACTCCCACTGGGTGTGGAGTGT...GTTTCTGTTTAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| 3UTR CAA 72 bp | CGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATaGACTACCAATCACATGCCATGGATGACCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPVHVFGTALL*TTNHMPWMTFD Trigger: ATCAAAGGTCATCCATGGCATGTGATTGGTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATCGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NPCKSYCSASNKVRKTGYRTSCP*AFSMQY Trigger: ATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCG...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | CAGTATGTGGTACTTCAGTGCCCTGGGAACTCTGTTGATAACCAGTCTCCCGTCGAAGCTGAGACCAGCTaGTTCATGCTTTCTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QYVVLQCPGNSVDNQSPVEAETS*FMLSFV Trigger: AACAAAAGAAAGCATGAAGCAGCTGGTCTCAGCTTC...GACGGGAGACTGGTTATCAACAGAGTTCCCAGGGCACTGAAGTACCACATACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
||
| CDS-3UTR CCA 90 bp | AATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACTTGCTGTGGCCACCTaGGTACAGTTGTGGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLMTTGRWKHTGEKLNFQLAVAT*VQLWCG Trigger: CCCACACCACAACTGTACCCAGGTGGCCACAGCAAG...TTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | CCTCGTAGCTGCAGATTTCTGAGAATTTGCCAAGTACCAAGCAGCAGTGCCATGTCATATTTAAGAGACTaGGTCCCAACCAAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSCRFLRICQVPSSSAMSYLRD*VPTKKR Trigger: TCGCTTCTTGGTTGGGACGCAGTCTCTTAAATATGA...CATGGCACTGCTGCTTGGTACTTGGCAAATTCTCAGAAATCTGCAGCTACGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCCTCCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGCAACCAAGAAGCGAATaGCATCTGTTTCCGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPSSCPILSSCPDFLKQPRSE*HLFPQF Trigger: AAACTGCGGAAACAGATGCCATTCGCTTCTTGGTTG...CTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATTATGTGGTACTTCAGTaGCCTGGGAACTCTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPCKSYCSASNKVRKTGYYVVLQ*PGNSVD Trigger: ATCAACAGAGTTCCCAGGGCACTGAAGTACCACATA...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR GCA 90 bp | GGGACTACAGATATGTATATCATACCTGAACCCGAAATCTGTTTCTACTTGGAGTCATATTTAAGAGACTaGGTCCCAACCAAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GTTDMYIIPEPEICFYLESYLRD*VPTKKR Trigger: TCGCTTCTTGGTTGGGACGCAGTCTCTTAAATATGA...CTCCAAGTAGAAACAGATTTCGGGTTCAGGTATGATATACATATCTGTAGTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR TCA 90 bp | AATCCCTGTAAGTCATACTGCTCAGCAAGCAACAAGGTGAGGAAAACAGGTTATCGTCATCAAAGTCTATaGTGTGGATCTGATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NPCKSYCSASNKVRKTGYRHQSL*CGSDYH Trigger: ATGATAATCAGATCCACATCATAGACTTTGATGACG...ATAACCTGTTTTCCTCACCTTGTTGCTTGCTGAGCAGTATGACTTACAGGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS CCA 90 bp | GGCACAGCCTGGCTCGAGCTGGGCTGGAGGTCCCACAGCAGGATGTaGCTATCGGCCAGGGAAATGACCTTCTTCCCATCCCCCATCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTAWLELGWRSHSRM*LSAREMTFFPSPIG Trigger: ACCGATGGGGGATGGGAAGAAGGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
||
| CDS-3UTR CAA 90 bp | AATGGTCCACAGGAGCCTTGCCTAAGGGACGGCACTGTGGGGAGGGCACACCTGGGGTCTGAGCAGTGCTaGCAGGGTCGTCAGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: NGPQEPCLRDGTVGRAHLGSEQC*QGRQGT Trigger: AGTCCCCTGACGACCCTGCAAGCACTGCTCAGACCC...CAGGTGTGCCCTCCCCACAGTGCCGTCCCTTAGGCAAGGCTCCTGTGGACCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCTGTCCCTGCCTGTGCACAGGCACCCAGATCCAGGTCCAGGACATGAAGCCACCTGGGTACAGTaGTGGTGTGGGCTCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLSLPVHRHPDPGPGHEATWVQ*WCGLHR Trigger: GCGGTGGAGCCCACACCACAACTGTACCCAGGTGGC...TTCATGTCCTGGACCTGGATCTGGGTGCCTGTGCACAGGCAGGGACAGACGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS CCA 90 bp | CGTTCTCTATGCAGTATATCTGGCACAGCCTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAATGACC | + |
|
Preference number: 5 (lower is better) Translates to: RSLCSISGTAWLELG*RSHSRMWLSAREMT Trigger: GGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCCAGATATACTGCATAGAGAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
||
| CDS CCA 90 bp | TTGCAGGGTCGTCAGGGGACTCGTGGCTACCGGATTCTAATTCCTTaGGCATCCTCCACACAGCTGCACACGCCTGGACTCGACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGRQGTRGYRILIP*ASSTQLHTPGLDCL Trigger: CAGACAGTCGAGTCCAGGCGTGTGCAGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCGGTAGCCACGAGTCCCCTGACGACCCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
||
| CDS CCA 90 bp | ATGAGCGTTCTCTATGCAGTATATCTGGCACAGCCTGGCTCGAGCTaGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSVLYAVYLAQPGSS*AGGPTAGCGYRPGK Trigger: TTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCCAGATATACTGCATAGAGAACGCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS TCA 90 bp | ATCCTCCACACAGCTGCACACGCCTGGACTCGACTGTCTGTAGCTTaGTTGAGTGAAGGCATGCTGCAGCCTCCACAGCACCCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: ILHTAAHAWTRLSVA*LSEGMLQPPQHPHL Trigger: CAAGTGTGGGTGCTGTGGAGGCTGCAGCATGCCTTCACTCAATCAAGCTACAGACAGTCGAGTCCAGGCGTGTGCAGCTGTGTGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS TCA 90 bp | TGGGCTGGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGGGAAATaGCCTTCTTCCCATCCCCCATCGGTTCCCACACGACATTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: WAGGPTAGCGYRPGK*PSSHPPSVPTRHFV Trigger: AACAAAATGTCGTGTGGGAACCGATGGGGGATGGGAAGAAGGTCATTTCCCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS GCA 90 bp | CCCACACGACATTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGCTTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: PTRHFVVAGGQHTFI*RAGTDVPDLTRLME Trigger: CTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAATGTCGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS TCA 90 bp | TACTGCTTGTTGGGGTTGAAGTCTAGGTCACGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTATATCTGGCACAGCCTGGCTCGAGCT | + |
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Preference number: 5 (lower is better) Translates to: YCLLGLKSRSRTSCP*AFSMQYIWHSLARA Trigger: AGCTCGAGCCAGGCTGTGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAGACTTCAACCCCAACAAGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS GCA 90 bp | ACTGTCTGTAGTTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGCTTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: TVCSFVVAGGQHTFI*RAGTDVPDLTRLME Trigger: CTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAACTACAGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS TCA 90 bp | TGTTGTAGCAGGTGGCCAGCACACCTTTATCTGCCGGGCTGGCACTaGTGTGCCAGATCTCACCCGCTTGATGGAGGAGGACATTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: CCSRWPAHLYLPGWH*CARSHPLDGGGHFY Trigger: ATAAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035657.9 ENSMUST00000221555.2 ENSMUST00000221877.2 |
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| CDS TCA 90 bp | AGGTCTGAAGAACTCCCTGGGAGATGGAAACCCTCATCCCACTATTaGCTCGAATCTGGAATTCCAGCCCGTAAATCACCGGGGCGTCGT | + |
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Preference number: 5 (lower is better) Translates to: RSEELPGRWKPSSHY*LESGIPARKSPGRR Trigger: ACGACGCCCCGGTGATTTACGGGCTGGAATTCCAGATTCGAGTCAATAGTGGGATGAGGGTTTCCATCTCCCAGGGAGTTCTTCAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
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| CDS GCA 90 bp | TTCATGCTTTCTTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGCTTGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: FMLSFVVAGGQHTFI*RAGTDVPDLTRLME Trigger: CTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAAGAAAGCATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGCAGAGTGAACAAGCCTGCAAGGCCTCTGCATCAGCTTCTGCCTCCAAGTCCCAGAACTTCACCTaGCAGTCATCTCCACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKQSEQACKASASASASKSQNFT*QSSPQL Trigger: CAGCTGTGGAGATGACTGCAAGGTGAAGTTCTGGGA...CTTGGAGGCAGAAGCTGATGCAGAGGCCTTGCAGGCTTGTTCACTCTGCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCTCCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGACAGGCCACGTTGCCTaGGGCCGAGTTGTCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLPPSSCPILSSCPDFLKTGHVA*GRVVKV Trigger: CACCTTGACAACTCGGCCCAAGGCAACGTGGCCTGT...CTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | GTTCTCTATGCAGTATATCTGGCTCATGCTCCGTGTGTCCCATCCTCGGAGGGTCCAGATCTCACCCGCTaGATGGAGGAGGACATTTTT | + |
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Preference number: 5 (lower is better) Translates to: VLYAVYLAHAPCVPSSEGPDLTR*MEEDIF Trigger: AAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTGG...ACCCTCCGAGGATGGGACACACGGAGCATGAGCCAGATATACTGCATAGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS-3UTR CAA 90 bp | TGTCTGTTCTCGGGGACCAGTGCATGTGTTTGGGACAGCTCTACTATTGACTACCCGGATTCTAATTCCTaGGGCATCCTCCACACAGCT | + |
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Preference number: 5 (lower is better) Translates to: CLFSGTSACVWDSSTIDYPDSNS*GILHTA Trigger: AGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCGG...GTAGTCAATAGTAGAGCTGTCCCAAACACATGCACTGGTCCCCGAGAACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCTCCAAGTTCCTGCCCTATTTTGAGTTCCTGTCCTGACTTCCTTAAGTACTGCTTGTTGGGGTaGAAGTCTAGGTCACGCACC | + |
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Preference number: 5 (lower is better) Translates to: LLPPSSCPILSSCPDFLKYCLLG*KSRSRT Trigger: GGTGCGTGACCTAGACTTCAACCCCAACAAGCAGTA...CTTAAGGAAGTCAGGACAGGAACTCAAAATAGGGCAGGAACTTGGAGGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | GGCTCTACAGGAAGAGGAAGCCATGAAGCCTCCAAAGTACTAGACAGTGTACAACCAGATCTCACCCGCTaGATGGAGGAGGACATTTTT | + |
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Preference number: 5 (lower is better) Translates to: GSTGRGSHEASKVLDSVQPDLTR*MEEDIF Trigger: AAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTGG...TTGTACACTGTCTAGTACTTTGGAGGCTTCATGGCTTCCTCTTCCTGTAGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACACCCTTTAAACAGAAACACGACACAGGCCACGTaGCCTTGGGCCGAGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RWKHTGEKLNFQHPLNRNTTQAT*PWAELS Trigger: TGACAACTCGGCCCAAGGCAACGTGGCCTGTGTCGT...GTTTCTGTTTAAAGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS-3UTR CAA 90 bp | AATCTCATGACAACAGGAAGGTGGAAACACACTGGGGAAAAGTTAAACTTCCAACCGGATTCTAATTCCTaGGGCATCCTCCACACAGCT | + |
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Preference number: 5 (lower is better) Translates to: NLMTTGRWKHTGEKLNFQPDSNS*GILHTA Trigger: AGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCGG...TTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTGTCATGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035657.9 ENSMUST00000221877.2 |
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| CDS CCA 72 bp | TGCAGTATATCTGGCACAGCCTGGCTCGAGCTGGGCTaGAGGTCCCACAGCAGGATGTGGCTATCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSISGTAWLELG*RSHSRMWLSAR Trigger: CCTGGCCGATAGCCACATCCTGCTGTGGGACCTCCAGCCCAGCTCGAGCCAGGCTGTGCCAGATATACTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS TCA 72 bp | AGGTGGCCAGCACACCTTTATCTGCCGGGCTGGCACTaGTGTGCCAGATCTCACCCGCTTGATGGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RWPAHLYLPGWH*CARSHPLDGGG Trigger: TCCTCCTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035657.9 ENSMUST00000221555.2 ENSMUST00000221877.2 |
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| CDS GCA 72 bp | CTAGGTCACGCACCAGCTGCCCATGAGCGTTCTCTATaGAGTATATCTGGCACAGCCTGGCTCGAGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGHAPAAHERSL*SISGTAWLELG Trigger: GCCCAGCTCGAGCCAGGCTGTGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS CCA 72 bp | CGTCAGGGGACTCGTGGCTACCGGATTCTAATTCCTTaGGCATCCTCCACACAGCTGCACACGCCTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: RQGTRGYRILIP*ASSTQLHTPGL Trigger: GAGTCCAGGCGTGTGCAGCTGTGTGGAGGATGCCCAAGGAATTAGAATCCGGTAGCCACGAGTCCCCTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS GCA 72 bp | TCTTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: SFVVAGGQHTFI*RAGTDVPDLTR Trigger: GCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS GCA 72 bp | GTGAAGGCATGCTGCAGCCTCCACAGCACCCACACTTaGTGGCAGAAGCTGAGACCAGCTGCTTCATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VKACCSLHSTHT*WQKLRPAASCF Trigger: AAAGCATGAAGCAGCTGGTCTCAGCTTCTGCCAGCAAGTGTGGGTGCTGTGGAGGCTGCAGCATGCCTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS GCA 72 bp | CATTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: HFVVAGGQHTFI*RAGTDVPDLTR Trigger: GCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS GCA 72 bp | AGTTTTGTTGTAGCAGGTGGCCAGCACACCTTTATCTaGCGGGCTGGCACTGATGTGCCAGATCTCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: SFVVAGGQHTFI*RAGTDVPDLTR Trigger: GCGGGTGAGATCTGGCACATCAGTGCCAGCCCGGCAGATAAAGGTGTGCTGGCCACCTGCTACAACAAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221877.2 |
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| CDS TCA 72 bp | ACACGCCTGGACTCGACTGTCTGTAGCTTGATTGAGTaGAGGCATGCTGCAGCCTCCACAGCACCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: TRLDSTVCSLIE*RHAAASTAPTL Trigger: AAGTGTGGGTGCTGTGGAGGCTGCAGCATGCCTTCACTCAATCAAGCTACAGACAGTCGAGTCCAGGCGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS TCA 72 bp | CCAACCAAGAAGCGAATGGCATCTGTTTCCGCAGTTTaGGGTGTTAGAGCACGTGCCTGGAATTCCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PTKKRMASVSAV*GVRARAWNSSP Trigger: CGGGCTGGAATTCCAGGCACGTGCTCTAACACCTCAAACTGCGGAAACAGATGCCATTCGCTTCTTGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035657.9 ENSMUST00000221555.2 ENSMUST00000221877.2 |
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| CDS TCA 72 bp | GCAGCCTCCACAGCACCCACACTTGCTGGCAGAAGCTaGGACCAGCTGCTTCATGCTTTCTTTTGTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: AASTAPTLAGRS*DQLLHAFFCCS Trigger: GCTACAACAAAAGAAAGCATGAAGCAGCTGGTCTCAGCTTCTGCCAGCAAGTGTGGGTGCTGTGGAGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035657.9 |
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| CDS TCA 72 bp | TTGGGGTTGAAGTCTAGGTCACGCACCAGCTGCCCATaGGCGTTCTCTATGCAGTATATCTGGCACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGLKSRSRTSCP*AFSMQYIWHSL Trigger: CAGGCTGTGCCAGATATACTGCATAGAGAACGCTCATGGGCAGCTGGTGCGTGACCTAGACTTCAACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221555.2 |
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| CDS TCA 72 bp | GAACTCCCTGGGAGATGGAAACCCTCATCCCACTATTaGCTCGAATCTGGAATTCCAGCCCGTAAATCACCG | + |
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Preference number: 6 (lower is better) Translates to: ELPGRWKPSSHY*LESGIPARKSP Trigger: CGGTGATTTACGGGCTGGAATTCCAGATTCGAGTCAATAGTGGGATGAGGGTTTCCATCTCCCAGGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222407.2 |
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