Pregenerated sensors for EIF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027613Ensembl transcript IDs: ENSMUST00000029142.15, ENSMUST00000109638.2, ENSMUST00000129830.2, ENSMUST00000134278.2, ENSMUST00000154841.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCGCATGCTGGTGGCAATGGTACTTGGCTTGGCTTCATTCAGCTTaGAGACGCTCTCCACCACTGACAGCTCCGTGCTGGTCGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PACWWQWYLAWLHSA*RRSPPLTAPCWSCP Trigger: TGGACACGACCAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCCAAGTACCATTGCCACCAGCATGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| 3UTR CCA 90 bp | TGGAAAATGAGCCAAAGTCCAGAGGCAGGAGCCCACACGGCAGCATaGACGGTGACTCATGTGAGGCTGTCAATGAGGGAATCCCGCATG | + |
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Preference number: 1 (lower is better) Translates to: WKMSQSPEAGAHTAA*TVTHVRLSMRESRM Trigger: CATGCGGGATTCCCTCATTGACAGCCTCACATGAGTCACCGTCCATGCTGCCGTGTGGGCTCCTGCCTCTGGACTTTGGCTCATTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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| 3UTR TCA 90 bp | GACAGGGCAGGCTTTCCAGTAACAATTGTCAAGAGATGGCACAGGTaGAGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: DRAGFPVTIVKRWHR*RVGQSIQLYRALPC Trigger: GCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCTTCACCTGTGCCATCTCTTGACAATTGTTACTGGAAAGCCTGCCCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR CCA 90 bp | AGGCTTTCCAGTAACAATTGTCAAGAGATGGCACAGGTGAAGGGTTaGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: RLSSNNCQEMAQVKG*AINSALPSSAMPHC Trigger: GCAGTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCTTCACCTGTGCCATCTCTTGACAATTGTTACTGGAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR GCA 90 bp | CAAAAACAAGAAGCAACTTGTTCATATTCAGAGGCAGGAGAGAGATaGAAATCCTCTCCTCCGCCCTTAGGTGTGGGACTCTGTAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: QKQEATCSYSEAGER*KSSPPPLGVGLCKS Trigger: TGACTTACAGAGTCCCACACCTAAGGGCGGAGGAGAGGATTTGCATCTCTCTCCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR-3UTR GCA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCGAGGCAGGAGAGAGATaGAAATCCTCTCCTCCGCCC | + |
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Preference number: 2 (lower is better) Translates to: NPSTQEADAGGFLSSRPAEAGER*KSSPPP Trigger: GGGCGGAGGAGAGGATTTGCATCTCTCTCCTGCCTC...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR CAA 90 bp | TCCCGCATGCTGGTGGCAATGGTACTTGGCTTGGCTTCATTCAGCTaGAAGACGCTCTCCACCACTGACAGCTCCGTGCTGGTCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SRMLVAMVLGLASFS*KTLSTTDSSVLVVS Trigger: GGACACGACCAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCCAAGTACCATTGCCACCAGCATGCGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCATCCCAGCAGGCCACAAGGGGGACCTaGAGAAGGGAGGACAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: WSCPDHRKHTNRSPPSQQATRGT*RREDNS Trigger: TGAGTTGTCCTCCCTTCTTCAGGTCCCCCTTGTGGC...CTGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCATCCCAGCAGCCTCAGGCATGGAAAATaGGCCAAAGTCCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRVQTTESTPIVHHHPSSLRHGK*AKVQRQ Trigger: CTGCCTCTGGACTTTGGCTCATTTTCCATGCCTGAG...GCTGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTTTCCAGTATCCCTGTaGAGGAAAAACGAGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: NPSTQEADAGGFLSSRPAFPVSL*RKNETK Trigger: CTTGGTCTCGTTTTTCCTTCACAGGGATACTGGAAA...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTTCATTCAGCTTGAAGACGCTCTCCACCACTGACAGCTCCGTGCTGGTCCTTCCTACTAGCACCTaGTCAGCAACTGTCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LASFSLKTLSTTDSSVLVLPTST*SATVCL Trigger: CAGACAGACAGTTGCTGACCAGGTGCTAGTAGGAAG...GACCAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129830.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTTTCCCCACTGCCAGCATCTaGTACAGACTAGCTCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TFIQEPQELKASMTGQAFPTASI*YRLAQA Trigger: TGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGG...GAAAGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR-3UTR CCA 90 bp | GATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCAAGACTAGCTCAGGCATaGAAAATGAGCCAAAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DGGRQSFNGVGHKIAELSRLAQA*KMSQSP Trigger: TGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCT...TGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGATGCTCAAAAACAAGAAGCAACTTGTTCATATTCAGAGGCAGGAGAGAGAGGCTACTCTCAAGTCTaGGAGACAGTGTTCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TDAQKQEATCSYSEAGERGYSQV*ETVFLI Trigger: GATCAAGAACACTGTCTCTCAGACTTGAGAGTAGCC...TCTCTCTCCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTTTGAGCATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR TCA 72 bp | CTCCCTCGGTTCACAGTGCCTGCCACAAGGGGGACCTaGAGAAGGGAGGACAACTCATCCTGGTCCTCGATA | + |
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Preference number: 3 (lower is better) Translates to: LPRFTVPATRGT*RREDNSSWSSI Trigger: TATCGAGGACCAGGATGAGTTGTCCTCCCTTCTTCAGGTCCCCCTTGTGGCAGGCACTGTGAACCGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| 3UTR CCA 72 bp | AGCCAAAGTCCAGAGGCAGGAGCCCACACGGCAGCATaGACGGTGACTCATGTGAGGCTGTCAATGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQSPEAGAHTAA*TVTHVRLSMRE Trigger: TTCCCTCATTGACAGCCTCACATGAGTCACCGTCCATGCTGCCGTGTGGGCTCCTGCCTCTGGACTTTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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| 3UTR TCA 72 bp | TGGTGGCAATGGTACTTGGCTTGGCTTCATTCAGCTTaGAGACGCTCTCCACCACTGACAGCTCCGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: WWQWYLAWLHSA*RRSPPLTAPCW Trigger: CCAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCCAAGTACCATTGCCACCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| 3UTR CCA 72 bp | CTCTACCGAGCTCTGCCATGCCCCACTGCCAGCATCTaGTACAGACTAGCTCAGGCATGGAAAATGAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LYRALPCPTASI*YRLAQAWKMSQ Trigger: TTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCATGGCAGAGCTCGGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR GCA 72 bp | ATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACTaGCAGCATCTGGTACAGACTAGCTCAGGCATGGAA | + |
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Preference number: 3 (lower is better) Translates to: INSALPSSAMPH*QHLVQTSSGME Trigger: TTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR-3UTR CAA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCAAAACAAGAAGCAACTaGTTCATATTCAGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: NPSTQEADAGGFLSSRPAKTRSN*FIFRGR Trigger: CCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTT...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGAGCCACAAGAACTGAAAGGCACAGGTGAAGGGTaGGGCAATCAATTCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: WGGAQDSRTFIQEPQELKGTGEG*GNQFSS Trigger: AGAGCTGAATTGATTGCCCAACCCTTCACCTGTGCC...TTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR TCA 72 bp | GAAACTAAGAGTGTAGCAATGGGGCACAGTGCCAGGTaGAAGGACTGCAAAGGCATAATGGCACACACCTAC | + |
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Preference number: 3 (lower is better) Translates to: ETKSVAMGHSAR*KDCKGIMAHTY Trigger: GTAGGTGTGTGCCATTATGCCTTTGCAGTCCTTTCACCTGGCACTGTGCCCCATTGCTACACTCTTAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| 3UTR TCA 72 bp | GGCTTTCCAGTAACAATTGTCAAGAGATGGCACAGGTaGAGGGTTGGGCAATCAATTCAGCTCTACCGAGCT | + |
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Preference number: 3 (lower is better) Translates to: GFPVTIVKRWHR*RVGQSIQLYRA Trigger: AGCTCGGTAGAGCTGAATTGATTGCCCAACCCTTCACCTGTGCCATCTCTTGACAATTGTTACTGGAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | CGAGCTCTGCCATGCCCCACTGCCAGCATCTGGTACAGACTAGCTCAGGCATGGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: RALPCPTASIWYRLAQAWAAGDG*VHHGNG Trigger: GCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGC...CCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCATGGCAGAGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: NPSTQEADAGGFLSSRPAAAGDG*VHHGNG Trigger: GCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGC...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCCGTGCTGGTCGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCACACATGCGCCCGATaGTTCGGCAGCCGGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: QLRAGRVQTTESTPIVHHHTCAR*FGSRRW Trigger: CCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTG...GTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACGACCAGCACGGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129830.2 |
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| CDS-3UTR CCA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTTCGGCAGCCGGCGATaGATGCGTGCACCACGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NPSTQEADAGGFLSSRPAFGSRR*MRAPRE Trigger: TTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAA...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
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| CDS-3UTR TCA 90 bp | CAGGTGAAGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACGACGCTCTCCACCACTaGCAGCTCCGTGCTGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: QVKGWAINSALPSSAMPHDALHH*QLRAGR Trigger: ACGACCAGCACGGAGCTGTCAGTGGTGGAGAGCGTC...GTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCTTCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | TGGTCGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCATCCCAGCAGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: WSCPDHRKHTNRSPPSQQAAGDG*VHHGNG Trigger: GCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGC...CTGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129830.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACTGCCAGCCTGTTGCGGATGTGCTaGAGCTCCTGGTCGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RVGQSIQLYRALPCPTASLLRMC*SSWSVV Trigger: CACCACCGACCAGGAGCTGCAGCACATCCGCAACAG...GCTGGCAGTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | GGCTTGGCTTCATTCAGCTTGAAGACGCTCTCCACCACTGACAGCTCCGTGCTGTTCGGCAGCCGGCGATaGATGCGTGCACCACGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GLASFSLKTLSTTDSSVLFGSRR*MRAPRE Trigger: TTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAA...CAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129830.2 |
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| CDS-3UTR TCA 90 bp | AGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACTGCCAGCAGTCATTGCAGGTGGTaGCATTGCCAAGGGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: RVGQSIQLYRALPCPTASSHCRW*HCQGPR Trigger: TCTCGGCCCTTGGCAATGTCACCACCTGCAATGACT...GCTGGCAGTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | GGCACAGGTGAAGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCTCGGTTCACAGTGCCTaGCACAAGGGGGACCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GTGEGLGNQFSSTELCHASVHSA*HKGDLK Trigger: CTTCAGGTCCCCCTTGTGGCAGGCACTGTGAACCGA...GGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCTTCACCTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | CTGGTCGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCATCCCAGCATCTCTGAGCCTCCGATaGCCACCAGGCAGTAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LVVSRPQKAHQSFTTIPASLSLR*PPGSRR Trigger: ACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGA...TGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| CDS-3UTR CCA 90 bp | CTTGGCTTGGCTTCATTCAGCTTGAAGACGCTCTCCACCACTGACAGCTCCGTGTCTCTGAGCCTCCGATaGCCACCAGGCAGTAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LGLASFSLKTLSTTDSSVSLSLR*PPGSRR Trigger: ACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGA...CACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCCAAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| CDS-3UTR TCA 90 bp | CAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGAGCCACCACACATGCGCCCGATaGTTCGGCAGCCGGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: QSFNGVGHKIAELSSKSHHTCAR*FGSRRW Trigger: CCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTG...GTGGCTCTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | GAGGATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTAGGCTGTTGCGGATGTaGTGCAGCTCCTGGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: EDGGRQSFNGVGHKIAELRLLRM*CSSWSV Trigger: CACCGACCAGGAGCTGCAGCACATCCGCAACAGCCT...AAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | GGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGTCCACCCGCCGTATCTaGACGGAGTCAGGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRQSFNGVGHKIAELSSKSTRRI*TESGRL Trigger: CAGCCTGCCTGACTCCGTGCAGATACGGCGGGTGGA...CTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR GCA 90 bp | TGCCCCACTGCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAACCACTGACAGCTCCGTaGTGGTCGTGTCCAGACCAC | + |
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Preference number: 4 (lower is better) Translates to: CPTASIWYRLAQAWKMSQPLTAP*WSCPDH Trigger: GTGGTCTGGACACGACCAGCACGGAGCTGTCAGTGG...TTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | CGAGCTCTGCCATGCCCCACTGCCAGCATCTGGTACAGACTAGCTCAGGCATGGCTTCCTACTAGCACCTaGTCAGCAACTGTCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RALPCPTASIWYRLAQAWLPTST*SATVCL Trigger: CAGACAGACAGTTGCTGACCAGGTGCTAGTAGGAAG...CCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCATGGCAGAGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR TCA 90 bp | CATGTGAGGCTGTCAATGAGGGAATCCCGCATGCTGGTGGCAATGGTACTTGGCCCTATAGAAGTTCTCTaGGCCTCCGATGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: HVRLSMRESRMLVAMVLGPIEVL*ASDGHQ Trigger: CTGGTGGCCATCGGAGGCTCAGAGAACTTCTATAGG...GCCAAGTACCATTGCCACCAGCATGCGGGATTCCCTCATTGACAGCCTCACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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| CDS-3UTR CCA 90 bp | GCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAAGTCCAGAGTCTCTGAGCCTCCGATaGCCACCAGGCAGTAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: ASIWYRLAQAWKMSQSPESLSLR*PPGSRR Trigger: ACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGA...CTCTGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | GCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAAGTCCAGAGCGTGCACCACGGGAATaGCATCGGAGAGCTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: ASIWYRLAQAWKMSQSPERAPRE*HRRAHP Trigger: AGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACG...CTCTGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | AGAACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTTTCGGCAGCCGGCGATaGATGCGTGCACCACGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RTFIQEPQELKASMTGQAFGSRR*MRAPRE Trigger: TTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAA...AGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS-3UTR CCA 90 bp | GCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAAGTCCAGAGGGTCGGTGGTGTTGTTaGGTACCAGGAGCCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: ASIWYRLAQAWKMSQSPEGRWCC*VPGAHA Trigger: GGCATGGGCTCCTGGTACCCAACAACACCACCGACC...CTCTGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| 3UTR CAA 72 bp | CTGGTGGCAATGGTACTTGGCTTGGCTTCATTCAGCTaGAAGACGCTCTCCACCACTGACAGCTCCGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVAMVLGLASFS*KTLSTTDSSVL Trigger: CAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCCAAGTACCATTGCCACCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| CDS-3UTR TCA 90 bp | GGCTTGGCTTCATTCAGCTTGAAGACGCTCTCCACCACTGACAGCTCCGTGCTGGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLASFSLKTLSTTDSSVLGSRRL*VWQNNR Trigger: TCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCC...CAGCACGGAGCTGTCAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGGCCACAAGGGGGACCTaGAGAAGGGAGGACAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRQSFNGVGHKIAELSSKATRGT*RREDNS Trigger: TGAGTTGTCCTCCCTTCTTCAGGTCCCCCTTGTGGC...CTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGGCAGCTCCTGGTCGGTaGTGTTGTTGGGTACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRQSFNGVGHKIAELSSKAAPGR*CCWVPG Trigger: TCCTGGTACCCAACAACACCACCGACCAGGAGCTGC...CTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | GAGGATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTCTCCCTGTCCAAGTCTaGGTGGACCAAGGCCACATA | + |
|
Preference number: 4 (lower is better) Translates to: EDGGRQSFNGVGHKIAELLPVQV*VDQGHI Trigger: TATGTGGCCTTGGTCCACCCAGACTTGGACAGGGAG...AAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR TCA 90 bp | GAGGATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTACTATAGAAGTTCTCTaGGCCTCCGATGGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDGGRQSFNGVGHKIAELTIEVL*ASDGHQ Trigger: CTGGTGGCCATCGGAGGCTCAGAGAACTTCTATAGT...AAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR TCA 90 bp | GAGGATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: EDGGRQSFNGVGHKIAELGSRRL*VWQNNR Trigger: TCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCC...AAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR TCA 90 bp | CGTGTCCAGACCACAGAAAGCACACCAATCGTTCACCACCATCCCAGCAGCAATGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: RVQTTESTPIVHHHPSSNGSRRL*VWQNNR Trigger: TCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCC...ATTGCTGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTGTGGTCTGGACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCCACTGCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAGCATGCTGGTGGCAATaGTACTTGGCTTGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPTASIWYRLAQAWKMSQACWWQ*YLAWLH Trigger: ATGAAGCCAAGCCAAGTACCATTGCCACCAGCATGC...TTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAAGTCCAGAGAATCCCGCATGCTGGTaGCAATGGTACTTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASIWYRLAQAWKMSQSPENPACW*QWYLAW Trigger: CCAAGCCAAGTACCATTGCCACCAGCATGCGGGATT...CTCTGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | AGAACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTGGGAATCCCGCATGCTaGTGGCAATGGTACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTFIQEPQELKASMTGQAGNPAC*WQWYLA Trigger: AGCCAAGTACCATTGCCACCAGCATGCGGGATTCCC...AGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR TCA 90 bp | ACTGATGCTCAAAAACAAGAAGCAACTTGTTCATATTCAGAGGCAGGAGAGAGACACACATGCGCCCGATaGTTCGGCAGCCGGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TDAQKQEATCSYSEAGERHTCAR*FGSRRW Trigger: CCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTG...TCTCTCTCCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTTTGAGCATCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTTTCTGGCTTCATTCAGCTTaGAGACGCTCTCCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TFIQEPQELKASMTGQAFWLHSA*RRSPPL Trigger: CAGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCA...GAAAGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | GATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCAGGTGGCAATGGTACTTaGCTTGGCTTCATTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DGGRQSFNGVGHKIAELSGGNGT*LGFIQL Trigger: AAGCTGAATGAAGCCAAGCCAAGTACCATTGCCACC...TGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CCA 90 bp | ACTGATGCTCAAAAACAAGAAGCAACTTGTTCATATTCAGAGGCAGGAGAGAGATCTCTGAGCCTCCGATaGCCACCAGGCAGTAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TDAQKQEATCSYSEAGERSLSLR*PPGSRR Trigger: ACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGA...TCTCTCTCCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTTTGAGCATCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS-3UTR TCA 90 bp | ACTGATGCTCAAAAACAAGAAGCAACTTGTTCATATTCAGAGGCAGGAGAGAGAGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: TDAQKQEATCSYSEAGERGSRRL*VWQNNR Trigger: TCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCC...TCTCTCTCCTGCCTCTGAATATGAACAAGTTGCTTCTTGTTTTTGAGCATCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS GCA 90 bp | GTGACATTGCCAAGGGCCGAGAGCCGCTCCTCCACCCGCCGTATCTaGACGGAGTCAGGCAGGCTGTTGCGGATGTGCTGCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTLPRAESRSSTRRI*TESGRLLRMCCSSW Trigger: CCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACGGCGGGTGGAGGAGCGGCTCTCGGCCCTTGGCAATGTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS TCA 90 bp | TCCCTCGGCGTCTTCCACCCGCCTTACCCACACACATGCGCCCGATaGTTCGGCAGCCGGCGATGGATGCGTGCACCACGGGAATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLGVFHPPYPHTCAR*FGSRRWMRAPREWH Trigger: ATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGGTAAGGCGGGTGGAAGACGCCGAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS GCA 90 bp | GCCGCTCCTCCACCCGCCGTATCTGCACGGAGTCAGGCAGGCTGTTaGGGATGTGCTGCAGCTCCTGGTCGGTGGTGTTGTTGGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPPPAVSARSQAGC*GCAAAPGRWCCWVP Trigger: TGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACGGCGGGTGGAGGAGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS GCA 90 bp | GTTCCCCACACACATGCGCCCGATGATTCGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGCATCGGAGAGCTCACCCTCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VPHTHAPDDSAAGDG*VHHGNGIGELTLEH Trigger: GTGTTCGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS GCA 90 bp | ACCCGCCGTATCTGCACGGAGTCAGGCAGGCTGTTGCGGATGTGCTaGAGCTCCTGGTCGGTGGTGTTGTTGGGTACCAGGAGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TRRICTESGRLLRMC*SSWSVVLLGTRSPC Trigger: GCATGGGCTCCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACGGCGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS GCA 90 bp | TCCACCCGCCGTATCTGCACGGAGTCAGGCAGGCTGTTGCGGATGTaGTGCAGCTCCTGGTCGGTGGTGTTGTTGGGTACCAGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STRRICTESGRLLRM*CSSWSVVLLGTRSP Trigger: TGGGCTCCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACGGCGGGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS GCA 90 bp | GTCTCCCACACACATGCGCCCGATGATTCGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGCATCGGAGAGCTCACCCTCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VSHTHAPDDSAAGDG*VHHGNGIGELTLEH Trigger: GTGTTCGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGGAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129830.2 |
||
| CDS GCA 90 bp | CCCACACACATGCGCCCGATGATTCGGCAGCCGGCGATGGATGCGTaGACCACGGGAATGGCATCGGAGAGCTCACCCTCGAACACACTA | + |
|
Preference number: 5 (lower is better) Translates to: PTHMRPMIRQPAMDA*TTGMASESSPSNTL Trigger: TAGTGTGTTCGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 |
||
| CDS GCA 90 bp | CTTACCCACACACATGCGCCCGATGATTCGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGCATCGGAGAGCTCACCCTCGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LTHTHAPDDSAAGDG*VHHGNGIGELTLEH Trigger: GTGTTCGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGGTAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS CCA 90 bp | ATCTGCACGGAGTCAGGCAGGCTGTTGCGGATGTGCTGCAGCTCCTaGTCGGTGGTGTTGTTGGGTACCAGGAGCCCATGCCTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICTESGRLLRMCCSS*SVVLLGTRSPCLFP Trigger: GGGGAACAGGCATGGGCTCCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGGGCAATCAATTCAGCTCTACCGAGCTCTGCCATGCCCCACTGCCAGCTTGCAGGTGGTGACATaGCCAAGGGCCGAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGQSIQLYRALPCPTASLQVVT*PRAESR Trigger: GCGGCTCTCGGCCCTTGGCAATGTCACCACCTGCAA...GCTGGCAGTGGGGCATGGCAGAGCTCGGTAGAGCTGAATTGATTGCCCAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS TCA 90 bp | TGTCCAAGTCTGGGTGGACCAAGGCCACATAGTCATTGCAGGTGGTaGCATTGCCAAGGGCCGAGAGCCGCTCCTCCACCCGCCGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CPSLGGPRPHSHCRW*HCQGPRAAPPPAVS Trigger: AGATACGGCGGGTGGAGGAGCGGCTCTCGGCCCTTGGCAATGTCACCACCTGCAATGACTATGTGGCCTTGGTCCACCCAGACTTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | CCAGCAGCAATCACCTCACTCCCTCGGTTCACAGTGCCTGCCACAAGGGGGACCCAACCGACCTCACAGTaGTTCTCGAACGACGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAAITSLPRFTVPATRGTQPTSQ*FSNDAL Trigger: CAGAGCGTCGTTCGAGAACAACTGTGAGGTCGGTTG...GGTCCCCCTTGTGGCAGGCACTGTGAACCGAGGGAGTGAGGTGATTGCTGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
||
| CDS-3UTR CAA 90 bp | AATCCCAGCACTCAGGAGGCAGACGCAGGCGGATTTCTGAGTTCAAGGCCAGCCCAACCGACCTCACAGTaGTTCTCGAACGACGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPSTQEADAGGFLSSRPAQPTSQ*FSNDAL Trigger: CAGAGCGTCGTTCGAGAACAACTGTGAGGTCGGTTG...GGCTGGCCTTGAACTCAGAAATCCGCCTGCGTCTGCCTCCTGAGTGCTGGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTGGGAGGCAGTCCTTTAATGGGGTGGGGCACAAGATAGCAGAACTTTCATCCTGGTCGGTGGTGTaGTTGGGTACCAGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGGRQSFNGVGHKIAELSSWSVV*LGTRSP Trigger: TGGGCTCCTGGTACCCAACAACACCACCGACCAGGA...TGAAAGTTCTGCTATCTTGTGCCCCACCCCATTAAAGGACTGCCTCCCACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGCACACCAATCGTTCACCACCATCCCAGCAGCAATCACCTCACTCCCTCAACCGACCTCACAGTaGTTCTCGAACGACGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QKAHQSFTTIPAAITSLPQPTSQ*FSNDAL Trigger: CAGAGCGTCGTTCGAGAACAACTGTGAGGTCGGTTG...AGGGAGTGAGGTGATTGCTGCTGGGATGGTGGTGAACGATTGGTGTGCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129830.2 ENSMUST00000154841.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGAGCCACAAGAACTGAAAGAGTCAGGCAGGCTGTaGCGGATGTGCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WGGAQDSRTFIQEPQELKESGRL*RMCCSS Trigger: GGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTC...TTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCATGCCCCACTGCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAATGGTGGCAATGGTACTaGGCTTGGCTTCATTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALPCPTASIWYRLAQAWKWWQWY*AWLHSA Trigger: AGCTGAATGAAGCCAAGCCAAGTACCATTGCCACCA...TTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGCAGTGGGGCATGGCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS TCA 90 bp | AGAAGTTCTCTGAGCCTCCGATGGCCACCAGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGACCTCACAGTTGTTCTCGAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: RSSLSLRWPPGSRRL*VWQNNRPHSCSRTT Trigger: CGTCGTTCGAGAACAACTGTGAGGTCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGAACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 ENSMUST00000154841.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTGGGGCACAAGATAGCAGAACTTTCATCCAAGAGCCACAAGAACTGAAATGGTCGGTGGTGTTGTaGGGTACCAGGAGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: WGGAQDSRTFIQEPQELKWSVVL*GTRSPC Trigger: GCATGGGCTCCTGGTACCCAACAACACCACCGACCA...TTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCTGCTATCTTGTGCCCCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | CACAAGGGGGACCTGAAGAAGGGAGGACAACTCATCCTGGTCCTCGATAGAAGTCTGAAGACTTCCACCTaGAGGACATCAGCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HKGDLKKGGQLILVLDRSLKTST*RTSARI Trigger: GATCCTGGCTGATGTCCTCAAGGTGGAAGTCTTCAG...ACTTCTATCGAGGACCAGGATGAGTTGTCCTCCCTTCTTCAGGTCCCCCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTCAACCGACCTCACAGTaGTTCTCGAACGACGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTFIQEPQELKASMTGQAQPTSQ*FSNDAL Trigger: CAGAGCGTCGTTCGAGAACAACTGTGAGGTCGGTTG...AGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATCTGGTACAGACTAGCTCAGGCATGGAAAATGAGCCAAAGTCCAGAGCTGAAGACTTCCACCTaGAGGACATCAGCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASIWYRLAQAWKMSQSPELKTST*RTSARI Trigger: GATCCTGGCTGATGTCCTCAAGGTGGAAGTCTTCAG...CTCTGGACTTTGGCTCATTTTCCATGCCTGAGCTAGTCTGTACCAGATGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS-3UTR CAA 90 bp | ACTTTCATCCAAGAGCCACAAGAACTGAAAGCCAGCATGACAGGGCAGGCTTTCTTGGCTTCATTCAGCTaGAAGACGCTCTCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TFIQEPQELKASMTGQAFLASFS*KTLSTT Trigger: AGTGGTGGAGAGCGTCTTCAAGCTGAATGAAGCCAA...GAAAGCCTGCCCTGTCATGCTGGCTTTCAGTTCTTGTGGCTCTTGGATGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS GCA 72 bp | CCAAGGGCCGAGAGCCGCTCCTCCACCCGCCGTATCTaGACGGAGTCAGGCAGGCTGTTGCGGATGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRAESRSSTRRI*TESGRLLRMCC Trigger: GCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACGGCGGGTGGAGGAGCGGCTCTCGGCCCTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS TCA 72 bp | GTCTTCCACCCGCCTTACCCACACACATGCGCCCGATaGTTCGGCAGCCGGCGATGGATGCGTGCACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: VFHPPYPHTCAR*FGSRRWMRAPR Trigger: CCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGTGTGGGTAAGGCGGGTGGAAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109638.2 |
||
| CDS GCA 72 bp | ATGCGCCCGATGATTCGGCAGCCGGCGATGGATGCGTaGACCACGGGAATGGCATCGGAGAGCTCACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MRPMIRQPAMDA*TTGMASESSPS Trigger: CGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 |
||
| CDS GCA 72 bp | ACACATGCGCCCGATGATTCGGCAGCCGGCGATGGATaGGTGCACCACGGGAATGGCATCGGAGAGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: THAPDDSAAGDG*VHHGNGIGELT Trigger: GGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAATCATCGGGCGCATGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 |
||
| CDS CAA 90 bp | TCAGGCAGGCTGTTGCGGATGTGCTGCAGCTCCTGGTCGGTGGTGTaGTTGGGTACCAGGAGCCCATGCCTGTTCCCCACACACATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRLLRMCCSSWSVV*LGTRSPCLFPTHMR Trigger: GCGCATGTGTGTGGGGAACAGGCATGGGCTCCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
||
| CDS TCA 72 bp | CTGGGTGGACCAAGGCCACATAGTCATTGCAGGTGGTaGCATTGCCAAGGGCCGAGAGCCGCTCCTCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LGGPRPHSHCRW*HCQGPRAAPPP Trigger: GGGTGGAGGAGCGGCTCTCGGCCCTTGGCAATGTCACCACCTGCAATGACTATGTGGCCTTGGTCCACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
||
| CDS CCA 72 bp | GAGTCAGGCAGGCTGTTGCGGATGTGCTGCAGCTCCTaGTCGGTGGTGTTGTTGGGTACCAGGAGCCCATGC | + |
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Preference number: 6 (lower is better) Translates to: ESGRLLRMCCSS*SVVLLGTRSPC Trigger: GCATGGGCTCCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
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| CDS GCA 72 bp | ATCTGCACGGAGTCAGGCAGGCTGTTGCGGATGTGCTaGAGCTCCTGGTCGGTGGTGTTGTTGGGTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: ICTESGRLLRMC*SSWSVVLLGTR Trigger: CCTGGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
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| CDS GCA 72 bp | CGTATCTGCACGGAGTCAGGCAGGCTGTTGCGGATGTaGTGCAGCTCCTGGTCGGTGGTGTTGTTGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: RICTESGRLLRM*CSSWSVVLLGT Trigger: GGTACCCAACAACACCACCGACCAGGAGCTGCAGCACATCCGCAACAGCCTGCCTGACTCCGTGCAGATACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029142.15 ENSMUST00000134278.2 |
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| CDS CCA 72 bp | TTCGGCAGCCGGCGATGGATGCGTGCACCACGGGAATaGCATCGGAGAGCTCACCCTCGAACACACTATAGA | + |
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Preference number: 6 (lower is better) Translates to: FGSRRWMRAPRE*HRRAHPRTHYR Trigger: TCTATAGTGTGTTCGAGGGTGAGCTCTCCGATGCCATTCCCGTGGTGCACGCATCCATCGCCGGCTGCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 |
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| CDS TCA 72 bp | CTGAGCCTCCGATGGCCACCAGGCAGTAGGCGTTTGTaGGTTTGGCAAAACAACCGACCTCACAGTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSLRWPPGSRRL*VWQNNRPHSCS Trigger: AGAACAACTGTGAGGTCGGTTGTTTTGCCAAACTCACAAACGCCTACTGCCTGGTGGCCATCGGAGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029142.15 ENSMUST00000109638.2 ENSMUST00000129830.2 ENSMUST00000154841.8 |
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| CDS TCA 72 bp | CAGCCAGGATCTCTTCTGTCTCCTATAGAAGTTCTCTaGGCCTCCGATGGCCACCAGGCAGTAGGCGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QPGSLLSPIEVL*ASDGHQAVGVC Trigger: ACAAACGCCTACTGCCTGGTGGCCATCGGAGGCTCAGAGAACTTCTATAGGAGACAGAAGAGATCCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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| CDS CAA 72 bp | ACCTGGTCAGCAACTGTCTGTCTGAAGACTTCCACCTaGAGGACATCAGCCAGGATCTCTTCTGTCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TWSATVCLKTST*RTSARISSVSL Trigger: CAGGGAGACAGAAGAGATCCTGGCTGATGTCCTCAAGGTGGAAGTCTTCAGACAGACAGTTGCTGACCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS CAA 90 bp | CCTACTAGCACCTGGTCAGCAACTGTCTGTCTGAAGACTTCCACCTaGAGGACATCAGCCAGGATCTCTTCTGTCTCCCTGTCCAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PTSTWSATVCLKTST*RTSARISSVSLSKS Trigger: AGACTTGGACAGGGAGACAGAAGAGATCCTGGCTGATGTCCTCAAGGTGGAAGTCTTCAGACAGACAGTTGCTGACCAGGTGCTAGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029142.15 |
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| CDS CAA 72 bp | ACCTGGTCAGCAACTGTCTGTCTGAAGACTTCCACCTaGAGGACATCAGCCAGGATCTCTTCTGTCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: TWSATVCLKTST*RTSARISSVSY Trigger: ATAGGAGACAGAAGAGATCCTGGCTGATGTCCTCAAGGTGGAAGTCTTCAGACAGACAGTTGCTGACCAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154841.8 |
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