Pregenerated sensors for EIF5A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050192Ensembl transcript IDs: ENSMUST00000060500.9
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAAGAGGAACCCGAGAGCCGGCATCAGAGAGTCAAGGTGGGACTaGGAGGGATTCTGTTCTAAGCTGCACGCCAAGGCCATGATTGTG | + |
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Preference number: 1 (lower is better) Translates to: EKRNPRAGIRESRWD*EGFCSKLHAKAMIV Trigger: CACAATCATGGCCTTGGCGTGCAGCTTAGAACAGAATCCCTCTCAGTCCCACCTTGACTCTCTGATGCCGGCTCTCGGGTTCCTCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 90 bp | ACATTGTTACACATTTTTCCTAGCTGGGAACAAAGGGTCCAGACATaGGAAGAGGAACCCGAGAGCCGGCATCAGAGAGTCAAGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: TLLHIFPSWEQRVQT*EEEPESRHQRVKVG Trigger: TCCCACCTTGACTCTCTGATGCCGGCTCTCGGGTTCCTCTTCTCATGTCTGGACCCTTTGTTCCCAGCTAGGAAAAATGTGTAACAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CCA 90 bp | AAGAGCATGCAACTCCTAAAGAAATATGAAATCAAAACACCAGTGTaGCTACTTATTGGCAAGACAATGACCAGAAGACAGCAAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KSMQLLKKYEIKTPV*LLIGKTMTRRQQSR Trigger: TCTGCTTTGCTGTCTTCTGGTCATTGTCTTGCCAATAAGTAGCCACACTGGTGTTTTGATTTCATATTTCTTTAGGAGTTGCATGCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 90 bp | AATATGAAATCAAAACACCAGTGTGGCTACTTATTGGCAAGACAATaGCCAGAAGACAGCAAAGCAGAAAGAAATCACTTCCTGGAATTC | + |
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Preference number: 1 (lower is better) Translates to: NMKSKHQCGYLLARQ*PEDSKAERNHFLEF Trigger: GAATTCCAGGAAGTGATTTCTTTCTGCTTTGCTGTCTTCTGGTCATTGTCTTGCCAATAAGTAGCCACACTGGTGTTTTGATTTCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 90 bp | TCGTTTCAAGATGTGTGTCTGCCACACAGACCATCTTATAGTCTATaGATTCTAGATATAAAGTCTGAAATCAGCACAAAGCAATTCAAC | + |
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Preference number: 1 (lower is better) Translates to: SFQDVCLPHRPSYSL*ILDIKSEISTKQFN Trigger: GTTGAATTGCTTTGTGCTGATTTCAGACTTTATATCTAGAATTCATAGACTATAAGATGGTCTGTGTGGCAGACACACATCTTGAAACGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGTTGCCTCTGCCCCTGTaGATCTCCACTGCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: YTQSRSLNKNGGALPTMQLPLPL*ISTAWW Trigger: CCACCAGGCAGTGGAGATTCACAGGGGCAGAGGCAA...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 90 bp | AGCAGCAGGAATCGAAAGCAGCATAGAGCAGATACCTGGGAAAAATaGAGCCTAATTCCTAATTGTGCTTTGCACGGGCAGAAGCTAACG | + |
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Preference number: 2 (lower is better) Translates to: SSRNRKQHRADTWEK*SLIPNCALHGQKLT Trigger: CGTTAGCTTCTGCCCGTGCAAAGCACAATTAGGAATTAGGCTCAATTTTTCCCAGGTATCTGCTCTATGCTGCTTTCGATTCCTGCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 90 bp | AGAGCAGATACCTGGGAAAAATTGAGCCTAATTCCTAATTGTGCTTaGCACGGGCAGAAGCTAACGGGTCACACTAAAGTCAACTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: RADTWEKLSLIPNCA*HGQKLTGHTKVNWL Trigger: TAGCCAGTTGACTTTAGTGTGACCCGTTAGCTTCTGCCCGTGCAAAGCACAATTAGGAATTAGGCTCAATTTTTCCCAGGTATCTGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAAGAGTCAAGGTGGGACTaGGAGGGATTCTGTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VYLYIHSHCALMKSMHPQESRWD*EGFCSK Trigger: CTTAGAACAGAATCCCTCTCAGTCCCACCTTGACTC...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAATTGGTCCACTTCAAGTaGCTGGCAGCCCAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: VYLYIHSHCALMKSMHPQLVHFK*LAAQVK Trigger: TTTGACTTGGGCTGCCAGTCACTTGAAGTGGACCAA...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAAAAAGCCAAAAGGGTCTaGTCTAGGTCAGAGGACACA | + |
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Preference number: 2 (lower is better) Translates to: VYLYIHSHCALMKSMHPQKAKRV*SRSEDT Trigger: TGTGTCCTCTGACCTAGATCAGACCCTTTTGGCTTT...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAATGCAGTGTGCTCTCTTaGAGATATCACATCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VYLYIHSHCALMKSMHPQCSVLS*RYHIWL Trigger: CAGCCAGATGTGATATCTTCAAGAGAGCACACTGCA...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 90 bp | TGTCTGAGAACCAATGTATCAATGTCTAGCTCCAAAACTCTTCTTTaGCATCTGTGCCAAAAACATGCTCTCAGATACACCACCAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: CLRTNVSMSSSKTLL*HLCQKHALRYTTKD Trigger: GTCCTTGGTGGTGTATCTGAGAGCATGTTTTTGGCACAGATGCAAAAGAAGAGTTTTGGAGCTAGACATTGATACATTGGTTCTCAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCCTCTGTCACTTTGTGTaGTGGTTGAAAGGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSLCHFV*WLKGLE Trigger: CTCAAGACCTTTCAACCAGCACACAAAGTGACAGAG...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAAAACGTCAATATCTTGTaGTTTAGACATCCCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: VYLYIHSHCALMKSMHPQNVNIL*FRHPFP Trigger: CGGGAAGGGATGTCTAAAGCACAAGATATTGACGTT...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTTATTGGCAAGACAATaGCCAGAAGACAGCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSLLARQ*PEDSKA Trigger: TGCTTTGCTGTCTTCTGGTCATTGTCTTGCCAATAA...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTCTCCTAGGGTATCTTaGTTCATCTCTGGATTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSSPRVS*FISGLV Trigger: AACCAATCCAGAGATGAAGCAAGATACCCTAGGAGA...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCAACTTCTCTAAACACTaGACTGCAGTGTGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSNFSKH*TAVCSL Trigger: AAGAGAGCACACTGCAGTGCAGTGTTTAGAGAAGTT...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 90 bp | TTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTGTGTGTATTaGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: FSSWKDLTNEQSCVY*YIHSHCALMKSMHP Trigger: GGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACACACAGCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGATTTGCTCAGAAAAGTaGCATTTACTGAAGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: YTQSRSLNKNGGALPTMQICSEK*HLLKLL Trigger: CAACAGCTTCAGTAAATGTCACTTTTCTGAGCAAAT...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTATACACTCACACTGTaGGCTAATGAAAAGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSYTLTL*ANEKHA Trigger: TGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATA...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR TCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTACATGCTACATTGCTaGTTTAAAACCCTGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSYMLHC*FKTLVC Trigger: ACAAACCAGGGTTTTAAATCAGCAATGTAGCATGTA...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCCATAGAGCAGATACCTaGGAAAAATTGAGCCTAATT | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSHRADT*EKLSLI Trigger: AATTAGGCTCAATTTTTCCCAGGTATCTGCTCTATG...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCAAGTCTAAACAAAAATaGAGGGGCATTACCTACAAT | + |
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Preference number: 2 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSKSKQK*RGITYN Trigger: ATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTT...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | AACCCGAGAGCCGGCATCAGAGAGTCAAGGTGGGACTaGGAGGGATTCTGTTCTAAGCTGCACGCCAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NPRAGIRESRWD*EGFCSKLHAKA Trigger: GGCCTTGGCGTGCAGCTTAGAACAGAATCCCTCTCAGTCCCACCTTGACTCTCTGATGCCGGCTCTCGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR GCA 72 bp | ACACTAAAGTCAACTGGCTACAACGTCAATATCTTGTaGTTTAGACATCCCTTCCCGGCACGTCTCCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: TLKSTGYNVNIL*FRHPFPARLLG Trigger: CCCTAGGAGACGTGCCGGGAAGGGATGTCTAAAGCACAAGATATTGACGTTGTAGCCAGTTGACTTTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CCA 72 bp | AAATCTGTACTATGGAGGGGAACAGAGTCAAGTGCTTaGTCCACTTCAAGTGACTGGCAGCCCAAGTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: KSVLWRGTESSA*STSSDWQPKSK Trigger: CTTTGACTTGGGCTGCCAGTCACTTGAAGTGGACCAAGCACTTGACTCTGTTCCCCTCCATAGTACAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | AGAGCTCTGTCACTTTGTGTGCTGGTTGAAAGGTCTTaGGTCAACTCTACAGCGTTAACCAGCACTTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RALSLCVLVERS*VNSTALTSTLP Trigger: AGGCAAAGTGCTGGTTAACGCTGTAGAGTTGACTCAAGACCTTTCAACCAGCACACAAAGTGACAGAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | AAGAAAGAAAGAAATGTGTACAGACGCAGATGGCGGTaGCGTCAGAACGAATTCCATTCTCAACATGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: KKERNVYRRRWR*RQNEFHSQHGA Trigger: GGCACCATGTTGAGAATGGAATTCGTTCTGACGTCACCGCCATCTGCGTCTGTACACATTTCTTTCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR GCA 72 bp | GCAGTAAGGATGTTTACAGCAGAGGGTGACCTTGTGTaGACTACCCTACGATATGTCCTTCACATGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: AVRMFTAEGDLV*TTLRYVLHMKK Trigger: TTTCTTCATGTGAAGGACATATCGTAGGGTAGTGCACACAAGGTCACCCTCTGCTGTAAACATCCTTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR-3UTR CAA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGATGAAGGCCATAGCTTaGGGACAACTAGATCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: YTQSRSLNKNGGALPTMQMKAIA*GQLDPD Trigger: GTCTGGATCTAGTTGTCCCAAAGCTATGGCCTTCAT...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR GCA 72 bp | AAAGCAAAAATACAACCAGAGCTCTGTCACTTTGTGTaGTGGTTGAAAGGTCTTGAGTCAACTCTACAGCGT | + |
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Preference number: 3 (lower is better) Translates to: KAKIQPELCHFV*WLKGLESTLQR Trigger: ACGCTGTAGAGTTGACTCAAGACCTTTCAACCAGCACACAAAGTGACAGAGCTCTGGTTGTATTTTTGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CCA 72 bp | AGCAGCAGGAATCGAAAGCAGCATAGAGCAGATACCTaGGAAAAATTGAGCCTAATTCCTAATTGTGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SSRNRKQHRADT*EKLSLIPNCAL Trigger: CAAAGCACAATTAGGAATTAGGCTCAATTTTTCCCAGGTATCTGCTCTATGCTGCTTTCGATTCCTGCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CCA 72 bp | CATTCGCCTACATGCTACATTGCTGATTTAAAACCCTaGTTTGTTAACCACTTAAGATCAGGAGTGATTTGC | + |
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Preference number: 3 (lower is better) Translates to: HSPTCYIADLKP*FVNHLRSGVIC Trigger: GCAAATCACTCCTGATCTTAAGTGGTTAACAAACCAGGGTTTTAAATCAGCAATGTAGCATGTAGGCGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CCA 72 bp | GCACGTCTCCTAGGGTATCTTGCTTCATCTCTGGATTaGTTTATCTTGTTATCAAAAAGAGATGATACCTTT | + |
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Preference number: 3 (lower is better) Translates to: ARLLGYLASSLD*FILLSKRDDTF Trigger: AAAGGTATCATCTCTTTTTGATAACAAGATAAACCAATCCAGAGATGAAGCAAGATACCCTAGGAGACGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | GATGTGTGTCTGCCACACAGACCATCTTATAGTCTATaGATTCTAGATATAAAGTCTGAAATCAGCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: DVCLPHRPSYSL*ILDIKSEISTK Trigger: CTTTGTGCTGATTTCAGACTTTATATCTAGAATTCATAGACTATAAGATGGTCTGTGTGGCAGACACACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | AGAGTTAAGAATTTCCTGTCTGTTCTTGAATGTGTCTaGGAACCAATGTATCAATGTCTAGCTCCAAAACTC | + |
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Preference number: 3 (lower is better) Translates to: RVKNFLSVLECV*EPMYQCLAPKL Trigger: GAGTTTTGGAGCTAGACATTGATACATTGGTTCTCAGACACATTCAAGAACAGACAGGAAATTCTTAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR TCA 72 bp | GAAGATATCACATCTGGCTGCAAGTATTTTGGTCACTaGTATAAAAGCACTGGTATAGAAATCTGTACTATG | + |
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Preference number: 3 (lower is better) Translates to: EDITSGCKYFGH*YKSTGIEICTM Trigger: CATAGTACAGATTTCTATACCAGTGCTTTTATATCAGTGACCAAAATACTTGCAGCCAGATGTGATATCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR TCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAATGCATGGTCGCCCTTTaGGCACGACGAAGCCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VYLYIHSHCALMKSMHPQCMVAL*ARRSRF Trigger: AAAACGGCTTCGTCGTGCTCAAAGGGCGACCATGCA...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR GCA 90 bp | CTGAAATCAGCACAAAGCAATTCAACTGAAATGCATGATACTTCCATTCGCCTACGACGAAGCCGTTTTTaGGCAGGGCTGAGCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LKSAQSNSTEMHDTSIRLRRSRF*AGLSTA Trigger: TGCAGTGCTCAGCCCTGCGCAAAAACGGCTTCGTCG...TAGGCGAATGGAAGTATCATGCATTTCAGTTGAATTGCTTTGTGCTGATTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 72 bp | ACCTGGGAAAAATTGAGCCTAATTCCTAATTGTGCTTaGCACGGGCAGAAGCTAACGGGTCACACTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TWEKLSLIPNCA*HGQKLTGHTKV Trigger: GACTTTAGTGTGACCCGTTAGCTTCTGCCCGTGCAAAGCACAATTAGGAATTAGGCTCAATTTTTCCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR CCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCCTCCACGATTTTGCATaGTCGCCCTTTGAGCACGAC | + |
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Preference number: 4 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSLHDFA*SPFEHD Trigger: GTCGTGCTCAAAGGGCGACCATGCAAAATCGTGGAG...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR CCA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGCAACAAGGTGTACCTTaGCATGACCATGCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YTQSRSLNKNGGALPTMQQQGVP*HDHASQ Trigger: CTGGGAAGCATGGTCATGCCAAGGTACACCTTGTTG...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR CCA 90 bp | GTGTATTTGTATATACACTCACACTGTGCGCTAATGAAAAGCATGCATCCCCAAGCCCAGTTCACCTTCTaGCAGCTTAAGATCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: VYLYIHSHCALMKSMHPQAQFTF*QLKIFT Trigger: CGTGAAGATCTTAAGCTGCCAGAAGGTGAACTGGGC...TTGGGGATGCATGCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 72 bp | AATCGAAAGCAGCATAGAGCAGATACCTGGGAAAAATaGAGCCTAATTCCTAATTGTGCTTTGCACGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NRKQHRADTWEK*SLIPNCALHGQ Trigger: CTGCCCGTGCAAAGCACAATTAGGAATTAGGCTCAATTTTTCCCAGGTATCTGCTCTATGCTGCTTTCGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR TCA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCGTTTTTGCGCAGGGCTaGGCACTGCATAGGATAAGT | + |
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Preference number: 4 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSVFAQG*ALHRIS Trigger: ACTTATCCTATGCAGTGCTCAGCCCTGCGCAAAAAC...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR TCA 90 bp | CTGAAATCAGCACAAAGCAATTCAACTGAAATGCATGATACTTCCATTCGCCTACACTCATGGCACACATaGCAGACACCTGCACATCTT | + |
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Preference number: 4 (lower is better) Translates to: LKSAQSNSTEMHDTSIRLHSWHT*QTPAHL Trigger: AAGATGTGCAGGTGTCTGTCATGTGTGCCATGAGTG...TAGGCGAATGGAAGTATCATGCATTTCAGTTGAATTGCTTTGTGCTGATTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR GCA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGCACATGACAGACACCTaGACATCTTCACCTGCATTG | + |
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Preference number: 4 (lower is better) Translates to: YTQSRSLNKNGGALPTMQHMTDT*TSSPAL Trigger: CAATGCAGGTGAAGATGTGCAGGTGTCTGTCATGTG...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 72 bp | ACAACAAACATGAGGTTTCTTATGAAGGCCATAGCTTaGGGACAACTAGATCCAGACCAATGGACCTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: TTNMRFLMKAIA*GQLDPDQWTWL Trigger: TAACCAGGTCCATTGGTCTGGATCTAGTTGTCCCAAAGCTATGGCCTTCATAAGAAACCTCATGTTTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR TCA 90 bp | TACACACAATCCAGAAGTCTAAACAAAAATGGAGGGGCATTACCTACAATGCAGCATCCTGAATGCATATaGGTTGATAATCGTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YTQSRSLNKNGGALPTMQHPECI*VDNRFS Trigger: AGAGAAACGATTATCAACTCATATGCATTCAGGATG...CTGCATTGTAGGTAATGCCCCTCCATTTTTGTTTAGACTTCTGGATTGTGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| 3UTR CAA 72 bp | TGGAAGGACTTGACAAATGAACAAAGCTGTGTGTATTaGTATATACACTCACACTGTGCGCTAATGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: WKDLTNEQSCVY*YIHSHCALMKS Trigger: GCTTTTCATTAGCGCACAGTGTGAGTGTATATACAAATACACACAGCTTTGTTCATTTGTCAAGTCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR CAA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCACGACGAAGCCGTTTTaGCGCAGGGCTGAGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSTTKPF*RRAEHC Trigger: GCAGTGCTCAGCCCTGCGCAAAAACGGCTTCGTCGT...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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| CDS-3UTR CAA 90 bp | CTACCAGACTACAGTACATTTAGTAGTTGGAAGGACTTGACAAATGAACAAAGCTTGCATGGTCGCCCTTaGAGCACGACGAAGCCGTTT | + |
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Preference number: 5 (lower is better) Translates to: LPDYSTFSSWKDLTNEQSLHGRP*STTKPF Trigger: AAACGGCTTCGTCGTGCTCAAAGGGCGACCATGCAA...GCTTTGTTCATTTGTCAAGTCCTTCCAACTACTAAATGTACTGTAGTCTGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060500.9 |
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