Pregenerated sensors for EIF4H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040731Ensembl transcript IDs: ENSMUST00000036125.10, ENSMUST00000202622.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGGTGCAGCTCCAGCACCACCCCTGCTTCCTACAGGCCTCAGCTaGAGGAAGCGGATTGAGCTGCAGCGGGTTGCACCCCCAAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: PGAAPAPPLLPTGLS*RKRIELQRVAPPSG Trigger: GCCGCTTGGGGGTGCAACCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAGCTGCACCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 90 bp | CTCAGTGCAAAGCACAGCTGCCCGGTGCAGCTCCAGCACCACCCCTaGTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LSAKHSCPVQLQHHP*FLQASAAGSGLSCS Trigger: GCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAGCTGCACCGGGCAGCTGTGCTTTGCACTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 90 bp | AGCGCCCTGGATCAGACAGACACAAGGGAAAGAGCGCAGACTCAGTaGAAAGCACAGCTGCCCGGTGCAGCTCCAGCACCACCCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SALDQTDTRERAQTQ*KAQLPGAAPAPPLL Trigger: AAGCAGGGGTGGTGCTGGAGCTGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGTCTGATCCAGGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 90 bp | AGACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTaGCCGGTGCAGCTCCAGCACCACCCCTGCTTCCTACAGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: RQTQGKERRLSAKHS*PVQLQHHPCFLQAS Trigger: TGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAGCTGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR TCA 90 bp | AGAAAGAAAGCAAAGGATGAAGCACCTCAGCCCACCTTCCACACGTaGCCAACATCCACACCACGTGGGAAGGGCGGGGAGAGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RKKAKDEAPQPTFHT*PTSTPRGKGGERAG Trigger: TCCTGCCCTCTCCCCGCCCTTCCCACGTGGTGTGGATGTTGGTCACGTGTGGAAGGTGGGCTGAGGTGCTTCATCCTTTGCTTTCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR TCA 90 bp | AGCCACAGCAACACAGAACTCGACATGCAGGTTGGAGAGAAGCTCTaGGAAAAAGCAGAGGACAGCACGCCCGGAGTGTGGCCAGGGCGT | + |
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Preference number: 1 (lower is better) Translates to: SHSNTELDMQVGEKL*EKAEDSTPGVWPGR Trigger: ACGCCCTGGCCACACTCCGGGCGTGCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGTTGCTGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | ATGAGCTTCCACTTGGTCTTAAGAGCGAGCAGGAGCAAAGCCACATaGCCACTGCCACCCAGGTCGCCACCAGTGCAGAAGGTCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: MSFHLVLRASRSKAT*PLPPRSPPVQKVQT Trigger: AGTCTGGACCTTCTGCACTGGTGGCGACCTGGGTGGCAGTGGCCATGTGGCTTTGCTCCTGCTCGCTCTTAAGACCAAGTGGAAGCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | GTAACTGATCAGAGAAAGTGCCAGACTCTAGGCCTTGAGCTGTGGTaGCGAGCAGCCTCTTGGGCTAAGCGCCCTGGATCAGACAGACAC | + |
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Preference number: 1 (lower is better) Translates to: VTDQRKCQTLGLELW*RAASWAKRPGSDRH Trigger: GTGTCTGTCTGATCCAGGGCGCTTAGCCCAAGAGGCTGCTCGCCACCACAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTGATCAGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | TGGGTAACTGATCAGAGAAAGTGCCAGACTCTAGGCCTTGAGCTGTaGTGGCGAGCAGCCTCTTGGGCTAAGCGCCCTGGATCAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: WVTDQRKCQTLGLEL*WRAASWAKRPGSDR Trigger: TCTGTCTGATCCAGGGCGCTTAGCCCAAGAGGCTGCTCGCCACCACAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTGATCAGTTACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 90 bp | CTAGGTACTGAGGGTCTCAACAGCTGGGTAACTGATCAGAGAAAGTaGCAGACTCTAGGCCTTGAGCTGTGGTGGCGAGCAGCCTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LGTEGLNSWVTDQRK*QTLGLELWWRAASW Trigger: CCAAGAGGCTGCTCGCCACCACAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTGATCAGTTACCCAGCTGTTGAGACCCTCAGTACCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | GCTCTTTCCCAGAAGCCACAGCAACACAGAACTCGACATGCAGGTTaGAGAGAAGCTCTGAGAAAAAGCAGAGGACAGCACGCCCGGAGT | + |
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Preference number: 1 (lower is better) Translates to: ALSQKPQQHRTRHAG*REALRKSRGQHARS Trigger: ACTCCGGGCGTGCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGTTGCTGTGGCTTCTGGGAAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 90 bp | GGCTCTAGCTCTTTCCCAGAAGCCACAGCAACACAGAACTCGACATaGAGGTTGGAGAGAAGCTCTGAGAAAAAGCAGAGGACAGCACGC | + |
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Preference number: 1 (lower is better) Translates to: GSSSFPEATATQNST*RLERSSEKKQRTAR Trigger: GCGTGCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGTTGCTGTGGCTTCTGGGAAAGAGCTAGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | CACCTAGAGGTTTCTAGACACCTAGGTACTGAGGGTCTCAACAGCTaGGTAACTGATCAGAGAAAGTGCCAGACTCTAGGCCTTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: HLEVSRHLGTEGLNS*VTDQRKCQTLGLEL Trigger: CAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTGATCAGTTACCCAGCTGTTGAGACCCTCAGTACCTAGGTGTCTAGAAACCTCTAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 90 bp | TTGGAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATaGACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCT | + |
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Preference number: 1 (lower is better) Translates to: LEFHSYSQLGAQQCG*TGLSFPHWRWITSS Trigger: AGATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | CACCCCTGCTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGCGGGAACATCCACACCACGTaGGAAGGGCGGGGAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HPCFLQASAAGSGLSCSGNIHTT*EGRGEG Trigger: GCCCTCTCCCCGCCCTTCCCACGTGGTGTGGATGTT...CCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAGCCTGCTACGGCTGATCAGGCTGCTGGGGCGGGTGATAGACCCCAAAAACATCCACACCACGTaGGAAGGGCGGGGAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: DRSLLRLIRLLGRVIDPKNIHTT*EGRGEG Trigger: GCCCTCTCCCCGCCCTTCCCACGTGGTGTGGATGTT...TTTGGGGTCTATCACCCGCCCCAGCAGCCTGATCAGCCGTAGCAGGCTCCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGGGAGCCTGCTACGGCTaGTCAGGCTGCTGGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLGACYG*SGCWGG Trigger: CCCGCCCCAGCAGCCTGATCAGCCGTAGCAGGCTCC...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAGGAAGAGCAGGGAATGAGCTTCCACTTGGTCTTAAGAGCGAGCAGGAGTGTAGGGCGACCGGCTaGCACCAGGCCGTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GPGRAGNELPLGLKSEQECRATG*HQAVVL Trigger: CAAGACCACGGCCTGGTGGCAGCCGGTCGCCCTACA...CTCCTGCTCGCTCTTAAGACCAAGTGGAAGCTCATTCCCTGCTCTTCCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTGCCCGGTGCATGTAGGGCGACCGGCTaGCACCAGGCCGTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TDTRERAQTQCKAQLPGACRATG*HQAVVL Trigger: CAAGACCACGGCCTGGTGGCAGCCGGTCGCCCTACA...TGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | CATACTGTCTGCGGGAGCAGGGGTCTGCCCCACAGAGGAAGCAGCACACCTAGACTCCAGCACCACCCCTaGTTCCTACAGGCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTVCGSRGLPHRGSSTPRLQHHP*FLQASA Trigger: AGCTGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAG...TCTAGGTGTGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGCAGACAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATAGCACAGCTGCCCGGTaGAGCTCCAGCACCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: GCPAMWMDGPVFSALEMDSTAAR*SSSTTP Trigger: AGGGGTGGTGCTGGAGCTGCACCGGGCAGCTGTGCT...ATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCATACTGTCTGCGGGAGCAGGGGTCTGCCCCACAGAGGAAGCAGCACACTCCCCTGCACCCATCTaGCCTCACTGTCTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: CSILSAGAGVCPTEEAAHSPAPI*PHCLTG Trigger: TCCTGTCAGACAGTGAGGCCAGATGGGTGCAGGGGA...GTGTGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGCAGACAGTATGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGGTTGCACCCCCAAGCGGCCTCCATGGCCCAGGAAGAGCAGGGAATGAGGTTGGAGAGAAGCTCTaGGAAAAAGCAGAGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: QRVAPPSGLHGPGRAGNEVGEKL*EKAEDS Trigger: GCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAAC...CTCATTCCCTGCTCTTCCTGGGCCATGGAGGCCGCTTGGGGGTGCAACCCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | CATACTGTCTGCGGGAGCAGGGGTCTGCCCCACAGAGGAAGCAGCACACCTAGAAGAGCGCAGACTCAGTaGAAAGCACAGCTGCCCGGT | + |
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Preference number: 2 (lower is better) Translates to: HTVCGSRGLPHRGSSTPRRAQTQ*KAQLPG Trigger: ACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCT...TCTAGGTGTGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGCAGACAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTGCGGGAGCAGGGGTCTaGCCCACAGAGGAAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLAGAGV*PTEEAA Trigger: TGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGC...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGACAGGAGCCTGCTACGGCTGATCAGGCTGCTGGGGCGGGTGATAGACCCCCATGCTCATCCCAGCTaGACACCAACAAGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: SDRSLLRLIRLLGRVIDPHAHPS*TPTSHH Trigger: GTGGTGACTTGTTGGTGTCCAGCTGGGATGAGCATG...GGGGTCTATCACCCGCCCCAGCAGCCTGATCAGCCGTAGCAGGCTCCTGTCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTGCCCGGTGCATCTGGCCTCACTGTCTaGCAGGAGCCTGCTACGGCT | + |
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Preference number: 2 (lower is better) Translates to: TDTRERAQTQCKAQLPGASGLTV*QEPATA Trigger: AGCCGTAGCAGGCTCCTGTCAGACAGTGAGGCCAGA...TGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATCTCCAGCACCACCCCTaGTTCCTACAGGCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GCPAMWMDGPVFSALEMDLQHHP*FLQASA Trigger: AGCTGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAG...ATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGCCCAAGCGGCCTCCATaGCCCAGGAAGAGCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLPKRPP*PRKSRE Trigger: TTCCCTGCTCTTCCTGGGCCATGGAGGCCGCTTGGG...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTCCCAAGCGGCCTCCATaGCCCAGGAAGAGCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLPKRPP*PRKSRE Trigger: TTCCCTGCTCTTCCTGGGCCATGGAGGCCGCTTGGG...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | CACCCCTGCTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGCGGGACACAGAACTCGACATaGAGGTTGGAGAGAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HPCFLQASAAGSGLSCSGTQNST*RLERSS Trigger: AGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGT...CCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTAGTGCAAAGCACAGCTaGCCGGTGCAGCTCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLSAKHS*PVQLQH Trigger: GTGCTGGAGCTGCACCGGGCAGCTGTGCTTTGCACT...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTAGGAGCAAAGCCACATaGCCACTGCCACCCAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLRSKAT*PLPPRS Trigger: CGACCTGGGTGGCAGTGGCCATGTGGCTTTGCTCCT...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGAGGCTGGCAGGAAGCTaGTGGCTACCAAGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLRLAGS*WLPSKL Trigger: CAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAGCCT...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTAGGCTGGCAGGAAGCTaGTGGCTACCAAGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLRLAGS*WLPSKL Trigger: CAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAGCCT...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGCTGGCAGGAAGCTGCTaGCTACCAAGCAAGCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLLAGSC*LPSKLH Trigger: GTGCAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAG...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGCCACATGGCCACTGCCACCCAGGTCGCCACCAGTGCAGAAGGTCCAGATGTTCTACCCCAAGGTaGATCAATTCTGCATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: AKPHGHCHPGRHQCRRSRCSTPR*INSACS Trigger: TGAGCATGCAGAATTGATGCACCTTGGGGTAGAACA...TCTGGACCTTCTGCACTGGTGGCGACCTGGGTGGCAGTGGCCATGTGGCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAGCCTGCTACGGCTGATCAGGCTGCTGGGGCGGGTGATAGACCCCAAAACTCGACATGCAGGTTaGAGAGAAGCTCTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: DRSLLRLIRLLGRVIDPKTRHAG*REALRK Trigger: TTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGT...TTTGGGGTCTATCACCCGCCCCAGCAGCCTGATCAGCCGTAGCAGGCTCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTGCCCGGTGCACATGCTCATCCCAGCTaGACACCAACAAGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: TDTRERAQTQCKAQLPGAHAHPS*TPTSHH Trigger: GTGGTGACTTGTTGGTGTCCAGCTGGGATGAGCATG...TGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | CATACTGTCTGCGGGAGCAGGGGTCTGCCCCACAGAGGAAGCAGCACACCTAGAGAGGGTCTCAACAGCTaGGTAACTGATCAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HTVCGSRGLPHRGSSTPREGLNS*VTDQRK Trigger: CTTTCTCTGATCAGTTACCCAGCTGTTGAGACCCTC...TCTAGGTGTGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGCAGACAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CAA 90 bp | AGCTCTTTCCCAGAAGCCACAGCAACACAGAACTCGACATGCAGGTaGGAGAGAAGCTCTGAGAAAAAGCAGAGGACAGCACGCCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSFPEATATQNSTCR*ERSSEKKQRTARPE Trigger: CTCCGGGCGTGCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGTTGCTGTGGCTTCTGGGAAAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTCTGTAAATTGCCGAGACCTTGCAACAAAGACAATCCCGAGCCAAGGGGTAGGCCTTGAGCTGTGGTaGCGAGCAGCCTCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVNCRDLATKTIPSQGVGLELW*RAASWA Trigger: AGCCCAAGAGGCTGCTCGCCACCACAGCTCAAGGCC...TACCCCTTGGCTCGGGATTGTCTTTGTTGCAAGGTCTCGGCAATTTACAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTGCCCGGTGCAAAAGAAAGCAAAGGATaGAGCACCTCAGCCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: TDTRERAQTQCKAQLPGAKESKG*STSAHL Trigger: AAGGTGGGCTGAGGTGCTTCATCCTTTGCTTTCTTT...TGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGTAAATTGCCGAGACCTTGCAACAAAGACAATCCCGAGCCAAGGGGTATCTGGCCTCACTGTCTaGCAGGAGCCTGCTACGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVNCRDLATKTIPSQGVSGLTV*QEPATA Trigger: AGCCGTAGCAGGCTCCTGTCAGACAGTGAGGCCAGA...TACCCCTTGGCTCGGGATTGTCTTTGTTGCAAGGTCTCGGCAATTTACAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATAGGTCCAGACTCCCCTaGACCCATCTGGCCTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SNVDGRACLFRIGDGLHHRSRLP*THLASL Trigger: CAGTGAGGCCAGATGGGTGCAGGGGAGTCTGGACCT...ATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | ACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCTGAAAGCATCAGCAGGTCCAGACTCCCCTaGACCCATCTGGCCTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: TGLSFPHWRWITSSESISRSRLP*THLASL Trigger: CAGTGAGGCCAGATGGGTGCAGGGGAGTCTGGACCT...GCTGATGCTTTCAGATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGCTGGTTGATCCCCTTTaGTCTCTCTCAAGTGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLLVDPL*SLSSEC Trigger: GCACTCACTTGAGAGAGAGCAAAGGGGATCAACCAG...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCTGAAAGCATCAGCAGGAGCAAAGCCACATaGCCACTGCCACCCAGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: TGLSFPHWRWITSSESISRSKAT*PLPPRS Trigger: CGACCTGGGTGGCAGTGGCCATGTGGCTTTGCTCCT...GCTGATGCTTTCAGATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCTGAAAGCATCAGCTGGCGAGCAGCCTCTTaGGCTAAGCGCCCTGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: TGLSFPHWRWITSSESISWRAAS*AKRPGS Trigger: TGATCCAGGGCGCTTAGCCCAAGAGGCTGCTCGCCA...GCTGATGCTTTCAGATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGACACAGAACTCGACATaGAGGTTGGAGAGAAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLTQNST*RLERSS Trigger: AGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGT...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTAAGGTGCATCAATTCTaGATGCTCATCCCAGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLKVHQF*MLIPAG Trigger: TCCAGCTGGGATGAGCATGCAGAATTGATGCACCTT...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCTGAAAGCATCAGCTCCCCTGCACCCATCTaGCCTCACTGTCTGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TGLSFPHWRWITSSESISSPAPI*PHCLTG Trigger: TCCTGTCAGACAGTGAGGCCAGATGGGTGCAGGGGA...GCTGATGCTTTCAGATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTGAGGGTCTCAACAGCTaGGTAACTGATCAGAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SILTVSWVPSNVDGRACLEGLNS*VTDQRK Trigger: CTTTCTCTGATCAGTTACCCAGCTGTTGAGACCCTC...AAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGTGTTCTACCCCAAGGTaGATCAATTCTGCATGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLCSTPR*INSACS Trigger: TGAGCATGCAGAATTGATGCACCTTGGGGTAGAACA...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | AGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATGTTGGAGAGAAGCTCTaGGAAAAAGCAGAGGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNVDGRACLFRIGDGLHHVGEKL*EKAEDS Trigger: GCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAAC...ATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGTAAATTGCCGAGACCTTGCAACAAAGACAATCCCGAGCCAAGGGGTAAAAGAAAGCAAAGGATaGAGCACCTCAGCCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSVNCRDLATKTIPSQGVKESKG*STSAHL Trigger: AAGGTGGGCTGAGGTGCTTCATCCTTTGCTTTCTTT...TACCCCTTGGCTCGGGATTGTCTTTGTTGCAAGGTCTCGGCAATTTACAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGACAGGAGCCTGCTACGGCTGATCAGGCTGCTGGGGCGGGTGATAGACCCCCACCAGGCCGTGGTCTaGCTCCAGCTCCCCCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: SDRSLLRLIRLLGRVIDPHQAVV*LQLPHA Trigger: GGCGTGGGGGAGCTGGAGCAAGACCACGGCCTGGTG...GGGGTCTATCACCCGCCCCAGCAGCCTGATCAGCCGTAGCAGGCTCCTGTCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR TCA 72 bp | CCTGCTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTaGGCTGCAGCGGGTTGCACCCCCAAGCGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PASYRPQLQEAD*AAAGCTPKRPP Trigger: TGGAGGCCGCTTGGGGGTGCAACCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | GCTCCAGCACCACCCCTGCTTCCTACAGGCCTCAGCTaGAGGAAGCGGATTGAGCTGCAGCGGGTTGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: APAPPLLPTGLS*RKRIELQRVAP Trigger: GGGTGCAACCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTGGTGCTGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | GACAATCCCGAGCCAAGGGGTAGGCTGGCAGGAAGCTaGTGGCTACCAAGCAAGCTGCACACCTCTCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DNPEPRGRLAGS*WLPSKLHTSQP Trigger: GGGCTGAGAGGTGTGCAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAGCCTACCCCTTGGCTCGGGATTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | CAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTaGCCGGTGCAGCTCCAGCACCACCCCTGCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QGKERRLSAKHS*PVQLQHHPCFL Trigger: TAGGAAGCAGGGGTGGTGCTGGAGCTGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CCA 72 bp | AATCCCGAGCCAAGGGGTAGGCTGGCAGGAAGCTGCTaGCTACCAAGCAAGCTGCACACCTCTCAGCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NPEPRGRLAGSC*LPSKLHTSQPL Trigger: AAGGGGCTGAGAGGTGTGCAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAGCCTACCCCTTGGCTCGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | GTAGGCTGGCAGGAAGCTGCTGGCTACCAAGCAAGCTaGACACCTCTCAGCCCCTTTCCCCAAGGCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VGWQEAAGYQAS*TPLSPFPQGSS Trigger: ACTAGAGCCTTGGGGAAAGGGGCTGAGAGGTGTGCAGCTTGCTTGGTAGCCAGCAGCTTCCTGCCAGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CCA 72 bp | CACTTGGTCTTAAGAGCGAGCAGGAGCAAAGCCACATaGCCACTGCCACCCAGGTCGCCACCAGTGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLVLRASRSKAT*PLPPRSPPVQK Trigger: CTTCTGCACTGGTGGCGACCTGGGTGGCAGTGGCCATGTGGCTTTGCTCCTGCTCGCTCTTAAGACCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CCA 72 bp | CAGAGAAAGTGCCAGACTCTAGGCCTTGAGCTGTGGTaGCGAGCAGCCTCTTGGGCTAAGCGCCCTGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: QRKCQTLGLELW*RAASWAKRPGS Trigger: TGATCCAGGGCGCTTAGCCCAAGAGGCTGCTCGCCACCACAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CCA 72 bp | GATCAGAGAAAGTGCCAGACTCTAGGCCTTGAGCTGTaGTGGCGAGCAGCCTCTTGGGCTAAGCGCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DQRKCQTLGLEL*WRAASWAKRPG Trigger: TCCAGGGCGCTTAGCCCAAGAGGCTGCTCGCCACCACAGCTCAAGGCCTAGAGTCTGGCACTTTCTCTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | AGTGAGTGCTCCATACTGTCTGCGGGAGCAGGGGTCTaGCCCACAGAGGAAGCAGCACACCTAGAGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SECSILSAGAGV*PTEEAAHLEVS Trigger: AGAAACCTCTAGGTGTGCTGCTTCCTCTGTGGGGCAGACCCCTGCTCCCGCAGACAGTATGGAGCACTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | AACCTGGTTGATCCCCTTTGCTCTCTCTCAAGTGAGTaGTCCATACTGTCTGCGGGAGCAGGGGTCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: NLVDPLCSLSSE*SILSAGAGVCP Trigger: GGGGCAGACCCCTGCTCCCGCAGACAGTATGGAGCACTCACTTGAGAGAGAGCAAAGGGGATCAACCAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGCCACATGGCCACTGCCACCCAGGTCGCCACCAGTGCAGAAGGTCCAGAAACTCGACATGCAGGTaGGAGAGAAGCTCTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AKPHGHCHPGRHQCRRSRNSTCR*ERSSEK Trigger: TTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTT...TCTGGACCTTCTGCACTGGTGGCGACCTGGGTGGCAGTGGCCATGTGGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR-3UTR CAA 90 bp | GGGTGCCCAGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATAACTCGACATGCAGGTaGGAGAGAAGCTCTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCPAMWMDGPVFSALEMDNSTCR*ERSSEK Trigger: TTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTT...ATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | AGGAGCAGCAGGCAGTTTCTTTGTTCTACCCCAAGGTaGATCAATTCTGCATGCTCATCCCAGCTGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: RSSRQFLCSTPR*INSACSSQLDT Trigger: GGTGTCCAGCTGGGATGAGCATGCAGAATTGATGCACCTTGGGGTAGAACAAAGAAACTGCCTGCTGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR GCA 72 bp | GACCATGGTCAACACGCCAGCCTAACTCCTTGTAAATaGTTCTCTGTAGCACCCCAAGGTTCACAGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DHGQHASLTPCK*FSVAPQGSQLP Trigger: TGGGAGCTGTGAACCTTGGGGTGCTACAGAGAAGCATTTACAAGGAGTTAGGCTGGCGTGTTGACCATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202622.4 |
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| 3UTR CCA 72 bp | CATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATaGACGGGCCTGTCTTTTCCGCATTGGAGATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: HSYSQLGAQQCG*TGLSFPHWRWI Trigger: AATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CCA 72 bp | CAGAAGCCACAGCAACACAGAACTCGACATGCAGGTTaGAGAGAAGCTCTGAGAAAAAGCAGAGGACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QKPQQHRTRHAG*REALRKSRGQH Trigger: GTGCTGTCCTCTGCTTTTTCTCAGAGCTTCTCTCCAACCTGCATGTCGAGTTCTGTGTTGCTGTGGCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 72 bp | TGTTCAAGCCAAAAGCCAAACCTGGTTGATCCCCTTTaGTCTCTCTCAAGTGAGTGCTCCATACTGTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: CSSQKPNLVDPL*SLSSECSILSA Trigger: CGCAGACAGTATGGAGCACTCACTTGAGAGAGAGCAAAGGGGATCAACCAGGTTTGGCTTTTGGCTTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR GCA 72 bp | TTTCTTTGTTCTACCCCAAGGTGCATCAATTCTGCATaGTCATCCCAGCTGGACACCAACAAGTCACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: FLCSTPRCINSA*SSQLDTNKSPP Trigger: TGGTGGTGACTTGTTGGTGTCCAGCTGGGATGAGCATGCAGAATTGATGCACCTTGGGGTAGAACAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| 3UTR CAA 72 bp | GCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGCGGGTaGCACCCCCAAGCGGCCTCCATGGCCCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASAAGSGLSCSG*HPQAASMAQEE Trigger: CTCTTCCTGGGCCATGGAGGCCGCTTGGGGGTGCAACCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| CDS-3UTR GCA 90 bp | CAGCGGGTTGCACCCCCAAGCGGCCTCCATGGCCCAGGAAGAGCAGGGAATGAGTACCGCCGCCGAAGCTaGTGTAGGCCCGATCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QRVAPPSGLHGPGRAGNEYRRRS*CRPDRR Trigger: ACGACGATCGGGCCTACAGCAGCTTCGGCGGCGGTA...CTCATTCCCTGCTCTTCCTGGGCCATGGAGGCCGCTTGGGGGTGCAACCCGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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| CDS-3UTR GCA 90 bp | CACCTCAGCCCACCTTCCACACGTGACCAACATCCACACCACGTGGGAAGGGCGTACCGCCGCCGAAGCTaGTGTAGGCCCGATCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSPPSTRDQHPHHVGRAYRRRS*CRPDRR Trigger: ACGACGATCGGGCCTACAGCAGCTTCGGCGGCGGTA...CGCCCTTCCCACGTGGTGTGGATGTTGGTCACGTGTGGAAGGTGGGCTGAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR TCA 90 bp | CACCCCTGCTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGCGGGCCCTGTAGCCAGAGTTaGAGTCATCCCGGGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HPCFLQASAAGSGLSCSGPCSQS*SHPGNP Trigger: GGGATTCCCGGGATGACTTCAACTCTGGCTACAGGG...CCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202622.4 |
||
| CDS-3UTR CCA 90 bp | CACCCCTGCTTCCTACAGGCCTCAGCTGCAGGAAGCGGATTGAGCTGCAGCGGGTGGCTCCCCCAAAGATaGCTGAGTTGGGGTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HPCFLQASAAGSGLSCSGWLPQR*LSWGWL Trigger: TAGCCAACCCCAACTCAGCCATCTTTGGGGGAGCCA...CCCGCTGCAGCTCAATCCGCTTCCTGCAGCTGAGGCCTGTAGGAAGCAGGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR GCA 90 bp | GAATTCCATTCTTACAGTCAGCTGGGTGCCCAGCAATGTGGATGGACGGGCCTGCATGGCCACCAGCACTaGCTCGGGACCCTCTACCGC | + |
|
Preference number: 4 (lower is better) Translates to: EFHSYSQLGAQQCGWTGLHGHQH*LGTLYR Trigger: GCGGTAGAGGGTCCCGAGGCAGTGCTGGTGGCCATG...CAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGACTGTAAGAATGGAATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACACAAGGGAAAGAGCGCAGACTCAGTGCAAAGCACAGCTGCCCGGTGCACCGGTCACCCAAGAGTaGACCGTCATAAGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDTRERAQTQCKAQLPGAPVTQE*TVISQS Trigger: GCTCTGACTTATGACGGTGCACTCTTGGGTGACCGG...TGCACCGGGCAGCTGTGCTTTGCACTGAGTCTGCGCTCTTTCCCTTGTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR CCA 90 bp | AACACAGCAGCCTCTCAGGAGCAGCAGGCAGTTTCTTTGTTCTACCCCAAGGTGCTTCCTCTCTGGGCCTaGCTCCCCCAAAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTAASQEQQAVSLFYPKVLPLWA*LPQRWL Trigger: CAGCCATCTTTGGGGGAGCCAGGCCCAGAGAGGAAG...CACCTTGGGGTAGAACAAAGAAACTGCCTGCTGCTCCTGAGAGGCTGCTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CAA 72 bp | TCCATGGCCCAGGAAGAGCAGGGAATGAGCTTCCACTaGGTCTTAAGAGCGAGCAGGAGCAAAGCCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SMAQEEQGMSFH*VLRASRSKATW Trigger: CCATGTGGCTTTGCTCCTGCTCGCTCTTAAGACCAAGTGGAAGCTCATTCCCTGCTCTTCCTGGGCCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR GCA 90 bp | TGGCCAGGGCGTGTAAAGGAAAGAAAGAAAGCAAAGGATGAAGCACCTCAGCCCCCGGTCACCCAAGAGTaGACCGTCATAAGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPGRVKERKKAKDEAPQPPVTQE*TVISQS Trigger: GCTCTGACTTATGACGGTGCACTCTTGGGTGACCGG...GGGCTGAGGTGCTTCATCCTTTGCTTTCTTTCTTTCCTTTACACGCCCTGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATCTTCCTCTCTGGGCCTaGCTCCCCCAAAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNVDGRACLFRIGDGLHHLPLWA*LPQRWL Trigger: CAGCCATCTTTGGGGGAGCCAGGCCCAGAGAGGAAG...ATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATGTGGATGGACGGGCCTGTCTTTTCCGCATTGGAGATGGATTACATCATTGGCTCCCCCAAAGATaGCTGAGTTGGGGTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SNVDGRACLFRIGDGLHHWLPQR*LSWGWL Trigger: TAGCCAACCCCAACTCAGCCATCTTTGGGGGAGCCA...ATGATGTAATCCATCTCCAATGCGGAAAAGACAGGCCCGTCCATCCACATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
||
| 3UTR CAA 72 bp | AACACAGCAGCCTCTCAGGAGCAGCAGGCAGTTTCTTaGTTCTACCCCAAGGTGCATCAATTCTGCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NTAASQEQQAVS*FYPKVHQFCML Trigger: GAGCATGCAGAATTGATGCACCTTGGGGTAGAACAAAGAAACTGCCTGCTGCTCCTGAGAGGCTGCTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036125.10 ENSMUST00000202622.4 |
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