RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF4G1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045983

Ensembl transcript IDs: ENSMUST00000044783.14, ENSMUST00000073840.12, ENSMUST00000115457.8, ENSMUST00000115460.8, ENSMUST00000115461.8, ENSMUST00000115463.8, ENSMUST00000128594.8, ENSMUST00000128840.8, ENSMUST00000136713.5, ENSMUST00000140576.8, ENSMUST00000141034.8, ENSMUST00000142344.8, ENSMUST00000143939.8, ENSMUST00000150333.8, ENSMUST00000151679.3, ENSMUST00000154594.8, ENSMUST00000154950.8, ENSMUST00000156226.8, ENSMUST00000231598.2, ENSMUST00000231618.2

Found 877 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGAGGTGCCCCGCACAGAGCAGTTGGTGCAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTACGCTCCAGCGTGGACTCGATACCA +
Preference number: 1 (lower is better)
Translates to: ERCPAQSSWCSSRPI*SRAMVLRSSVDSIP
Trigger: TGGTATCGAGTCCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACTGCTCTGTGCGGGGCACCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR TCA 90 bp TGGTACTACGCTCCAGCGTGGACTCGATACCAAGCCGTACGAAGATaGAGAGCAAGGAGGGTGAAGCCAGCTCCTGGACACACTGTACTG +
Preference number: 1 (lower is better)
Translates to: WYYAPAWTRYQAVRR*RARRVKPAPGHTVL
Trigger: CAGTACAGTGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTCATCTTCGTACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CCA 90 bp CACAGAGCAGTTGGTGCAGTAGTCGCCCCATATGCTCACGAGCAATaGTACTACGCTCCAGCGTGGACTCGATACCAAGCCGTACGAAGA +
Preference number: 1 (lower is better)
Translates to: HRAVGAVVAPYAHEQ*YYAPAWTRYQAVRR
Trigger: TCTTCGTACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACTGCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 90 bp GCTCATTTAGGTTGGCGTCTATCCAGTCGAACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCTTCTCTAGCTGCCTACGAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: AHLGWRLSSRTHADY*RRPSAASLAAYEAP
Trigger: AGGAGCTTCGTAGGCAGCTAGAGAAGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTGGATAGACGCCAACCTAAATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR CCA 90 bp AAGGTATATTCCACCTTCTTTTCAGCCACAAATGAGCCAACGTCTTaGCCCTCTGCTAGAAATTCCCTCCAGCTCAGCCCAGCCTCTCGC +
Preference number: 1 (lower is better)
Translates to: KVYSTFFSATNEPTS*PSARNSLQLSPASR
Trigger: GCGAGAGGCTGGGCTGAGCTGGAGGGAATTTCTAGCAGAGGGCCAAGACGTTGGCTCATTTGTGGCTGAAAAGAAGGTGGAATATACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 90 bp TCCCATGGGCACCCCATCTTCCTGGAGAATAGGTGTAATCAGTTCTaGCAGGTAAAGCCATACATGAGGGATATCAATTTCCATGTCCTC +
Preference number: 1 (lower is better)
Translates to: SHGHPIFLENRCNQF*QVKPYMRDINFHVL
Trigger: GAGGACATGGAAATTGATATCCCTCATGTATGGCTTTACCTGGCAGAACTGATTACACCTATTCTCCAGGAAGATGGGGTGCCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGCACCCACTGCCACTaGCGCCACTGCTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGTHCH*RHCCCR
Trigger: GCGGCAGCAGCAGTGGCGGCAGTGGCAGTGGGTGCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGCACCCACTGCCACTaGCGCCACTGCTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGTHCH*RHCCCR
Trigger: GCGGCAGCAGCAGTGGCGGCAGTGGCAGTGGGTGCC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGCACCCACTGCCACTaGCGCCACTGCTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGTHCH*RHCCCR
Trigger: GCGGCAGCAGCAGTGGCGGCAGTGGCAGTGGGTGCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGCGGCTGGCTGGCTaGGCCATCCACGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRRLAG*AIHVSM
Trigger: CATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGCAGTCCAGGCGGCTaGCTGGCTGGGCCATCCACG +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVCSPGG*LAGPST
Trigger: CGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGGTGGTGCAGGGGCTaGGGCATATGCCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGWCRG*GICPQQ
Trigger: CTGCTGGGGGCATATGCCCCAGCCCCTGCACCACCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGGTGGTGCAGGGGCTaGGGCATATGCCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGWCRG*GICPQQ
Trigger: CTGCTGGGGGCATATGCCCCAGCCCCTGCACCACCC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGGCGGCTGGCTGGCTaGGCCATCCACGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVRRLAG*AIHVSM
Trigger: CATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGGCGGCTGGCTGGCTaGGCCATCCACGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSRRLAG*AIHVSM
Trigger: CATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACTACAGGCACCCACTaGCACTGCCGCCACTGCTGC +
Preference number: 2 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTTGTH*HCRHCC
Trigger: GCAGCAGTGGCGGCAGTGGCAGTGGGTGCCTGTAGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPSTCP*LQVPCP
Trigger: GGGGCAGGGGACTTGGAGCCATGGACACGTGGATGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPSTCP*LQVPCP
Trigger: GGGGCAGGGGACTTGGAGCCATGGACACGTGGATGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVTHADY*RRPSAA
Trigger: AGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp GGCCATCCACGTGTCCATGGCTCCAAGTCCCCTGCCCCACCCGCCATCAGTTGTGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 2 (lower is better)
Translates to: GHPRVHGSKSPAPPAISCAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...ACAACTGATGGCGGGTGGGGCAGGGGACTTGGAGCCATGGACACGTGGATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 2 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp CGTGTCCATGGCTCCAAGTCCCCTGCCCCACCCGCCATCAGTTGTGATCAGACTGCCACACCCTTGCCCTaGTGTTCAGCAGGATCCTTG +
Preference number: 2 (lower is better)
Translates to: RVHGSKSPAPPAISCDQTATPLP*CSAGSL
Trigger: CAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGC...AGTCTGATCACAACTGATGGCGGGTGGGGCAGGGGACTTGGAGCCATGGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTTGTAGCTCCTTCTaGTCATCACACAGGTATTTC +
Preference number: 2 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPACSSF*SSHRYF
Trigger: GAAATACCTGTGTGATGAGCAGAAGGAGCTACAAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGGCGGCTGGCTGGCTaGGCCATCCACGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: FISSRHIALQAPTATAATRRLAG*AIHVSM
Trigger: CATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTGCAGTCCAGGCGGCTaGCTGGCTGGGCCATCCACG +
Preference number: 2 (lower is better)
Translates to: LISHFISSRHIALQAPTACSPGG*LAGPST
Trigger: CGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTGCAGTCCAGGCGGCTaGCTGGCTGGGCCATCCACG +
Preference number: 2 (lower is better)
Translates to: SCLISHFISSRHIALQAPCSPGG*LAGPST
Trigger: CGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR GCA 90 bp CAGGTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACTTGAACATCCACTCGGGCACCCACTGCCACTaGCGCCACTGCTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: QVFLQQSCSHFQHLNIHSGTHCH*RHCCCR
Trigger: GCGGCAGCAGCAGTGGCGGCAGTGGCAGTGGGTGCC...CGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTGCAGTCCAGGCGGCTaGCTGGCTGGGCCATCCACG +
Preference number: 2 (lower is better)
Translates to: CLISHFISSRHIALQAPTCSPGG*LAGPST
Trigger: CGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SCLISHFISSRHIALQAPPSTCP*LQVPCP
Trigger: GGGGCAGGGGACTTGGAGCCATGGACACGTGGATGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: LISHFISSRHIALQAPTAPSTCP*LQVPCP
Trigger: GGGGCAGGGGACTTGGAGCCATGGACACGTGGATGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGGCGGCTGGCTGGCTaGGCCATCCACGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: CLISHFISSRHIALQAPTRRLAG*AIHVSM
Trigger: CATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: CLISHFISSRHIALQAPTPSTCP*LQVPCP
Trigger: GGGGCAGGGGACTTGGAGCCATGGACACGTGGATGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000156226.8
3UTR-3UTR TCA 90 bp TCTCTAGCTGCCTACGAAGCTCCTCAAAGGCAAGTGTCCTCTGGCCAGGAGCTTCAAGCCGTACGAAGATaGAGAGCAAGGAGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SLAAYEAPQRQVSSGQELQAVRR*RARRVK
Trigger: CTTCACCCTCCTTGCTCTTCATCTTCGTACGGCTTG...AAGCTCCTGGCCAGAGGACACTTGCCTTTGAGGAGCTTCGTAGGCAGCTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TGCTCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCAGTCCAGGCGGCTaGCTGGCTGGGCCATCCACG +
Preference number: 2 (lower is better)
Translates to: CSHFQHLNIHSERSLKDNCSPGG*LAGPST
Trigger: CGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA...ATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR TCA 90 bp CTTCTGCTCATCACACAGGTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTC +
Preference number: 2 (lower is better)
Translates to: LLLITQVFLQQSCSHFQHQSNTR*LLPPSF
Trigger: GAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTG...GTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR-3UTR TCA 90 bp TCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 2 (lower is better)
Translates to: SHFQHLNIHSERSLKDNCEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...GCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CAA 90 bp CTTGTAGCTCCTTCTGCTCATCACACAGGTATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: LVAPSAHHTGISAAV*LALSTLEHPLGEES
Trigger: AGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAGGAGCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CAA 90 bp CTCTTGCATAAGAGACCCAGGATCTCCAGCAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGCTTCGTAATTTCCCTGAAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LLHKRPRISSNKEVA*PMGLRGFVISLKSS
Trigger: AGAGCTCTTCAGGGAAATTACGAAGCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATTGCTGGAGATCCTGGGTCTCTTATGCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCTATGCTCACGAGCAATaGTACTACGCTCCAGCGTGG +
Preference number: 2 (lower is better)
Translates to: SHFQHLNIHSERSLKDNCYAHEQ*YYAPAW
Trigger: CCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATA...GCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 2 (lower is better)
Translates to: SHFQHLNIHSERSLKDNCKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...GCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR-3UTR TCA 90 bp CCTTCTGCTCATCACACAGGTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 2 (lower is better)
Translates to: PSAHHTGISAAVLLALSTPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...TGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTCATGTCATTGAGATaGAGATATTCCTCAATGATG +
Preference number: 2 (lower is better)
Translates to: SCLISHFISSRHIALQAPFMSLR*RYSSMM
Trigger: CATCATTGAGGAATATCTCCATCTCAATGACATGAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CAA 90 bp ATCACACAGGTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACTaGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCAGAATA +
Preference number: 2 (lower is better)
Translates to: ITQVFLQQSCSHFQH*NIHSERSLKDNCRI
Trigger: TATTCTGCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR CCA 72 bp CCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATaGCTCCAAGTCCCCTGCCCCACCCGCCATCAGTTG +
Preference number: 3 (lower is better)
Translates to: PGGWLAGPSTCP*LQVPCPTRHQL
Trigger: CAACTGATGGCGGGTGGGGCAGGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 72 bp CCCGCACAGAGCAGTTGGTGCAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTACGCTCCAGCGTGGAC +
Preference number: 3 (lower is better)
Translates to: PAQSSWCSSRPI*SRAMVLRSSVD
Trigger: GTCCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACTGCTCTGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 72 bp GGGCCACACCCTTGCCCTGCTGTTCAGCAGGATCCTTaGTGCTCTCCCAGCTGTAGAAGGCGTCTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: GPHPCPAVQQDP*CSPSCRRRLPS
Trigger: TGAAGGAAGACGCCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 72 bp TGGGCAGTAGAGAGGTGCCCCGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGCTCACGAGCAATGGTA +
Preference number: 3 (lower is better)
Translates to: WAVERCPAQSSW*SSRPICSRAMV
Trigger: TACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACTGCTCTGTGCGGGGCACCTCTCTACTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CCA 72 bp TACTGGGCAGTAGAGAGGTGCCCCGCACAGAGCAGTTaGTGCAGTAGTCGCCCCATATGCTCACGAGCAATG +
Preference number: 3 (lower is better)
Translates to: YWAVERCPAQSS*CSSRPICSRAM
Trigger: CATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACTGCTCTGTGCGGGGCACCTCTCTACTGCCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 72 bp GGTTGGCGTCTATCCAGTCGAACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCTTCTCTAGCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: GWRLSSRTHADY*RRPSAASLAAY
Trigger: GTAGGCAGCTAGAGAAGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTGGATAGACGCCAACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR CCA 72 bp GTTGGTGCAGTAGTCGCCCCATATGCTCACGAGCAATaGTACTACGCTCCAGCGTGGACTCGATACCAAGCC +
Preference number: 3 (lower is better)
Translates to: VGAVVAPYAHEQ*YYAPAWTRYQA
Trigger: GGCTTGGTATCGAGTCCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR TCA 72 bp TCATTTAGGTTGGCGTCTATCCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTCAGCAGCTTCTCTAGC +
Preference number: 3 (lower is better)
Translates to: SFRLASIQSNTR*LLPPSFSSFSS
Trigger: GCTAGAGAAGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTGGATAGACGCCAACCTAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR CCA 72 bp TCCACCTTCTTTTCAGCCACAAATGAGCCAACGTCTTaGCCCTCTGCTAGAAATTCCCTCCAGCTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: STFFSATNEPTS*PSARNSLQLSP
Trigger: TGGGCTGAGCTGGAGGGAATTTCTAGCAGAGGGCCAAGACGTTGGCTCATTTGTGGCTGAAAAGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR-3UTR CAA 90 bp AGTTGGTGCAGTAGTCGCCCCATATGCTCACGAGCAATGGTACTACGCTCCAGCGCCTCCTTCATGTCATaGAGATGGAGATATTCCTCA +
Preference number: 3 (lower is better)
Translates to: SWCSSRPICSRAMVLRSSASFMS*RWRYSS
Trigger: TGAGGAATATCTCCATCTCAATGACATGAAGGAGGC...GCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR GCA 72 bp CTTCTGCTCATCACACAGGTATTTCTGCAGCAGTCTTaGTCGCACTTTCAACACTTGAACATCCACTCGGAG +
Preference number: 3 (lower is better)
Translates to: LLLITQVFLQQS*SHFQHLNIHSE
Trigger: CTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR GCA 72 bp GTCATGAGGGCTCGAACTAATGTATTGGATGCTATCTaGTGCTCATTTAGGTTGGCGTCTATCCAGTCGAAC +
Preference number: 3 (lower is better)
Translates to: VMRARTNVLDAI*CSFRLASIQSN
Trigger: GTTCGACTGGATAGACGCCAACCTAAATGAGCAGCAGATAGCATCCAATACATTAGTTCGAGCCCTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR GCA 72 bp ATGAGGGCTCGAACTAATGTATTGGATGCTATCTGCTaGTCATTTAGGTTGGCGTCTATCCAGTCGAACACA +
Preference number: 3 (lower is better)
Translates to: MRARTNVLDAIC*SFRLASIQSNT
Trigger: TGTGTTCGACTGGATAGACGCCAACCTAAATGAGCAGCAGATAGCATCCAATACATTAGTTCGAGCCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
3UTR GCA 72 bp CACCCCATCTTCCTGGAGAATAGGTGTAATCAGTTCTaGCAGGTAAAGCCATACATGAGGGATATCAATTTC +
Preference number: 3 (lower is better)
Translates to: HPIFLENRCNQF*QVKPYMRDINF
Trigger: GAAATTGATATCCCTCATGTATGGCTTTACCTGGCAGAACTGATTACACCTATTCTCCAGGAAGATGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR TCA 72 bp TATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACTTaGACATCCACTCGGAGAGGAGTCTCAAAGATAATT +
Preference number: 3 (lower is better)
Translates to: YFCSSLARTFNT*TSTRRGVSKII
Trigger: AATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTGCTGAGAGCGCCTaGGTCCCAGGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPAESA*VPGQPA
Trigger: GGCCGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGCTGAGAGCGCCTaGGTCCCAGGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPAESA*VPGQPA
Trigger: GGCCGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCTGCTGAGAGCGCCTaGGTCCCAGGCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPAESA*VPGQPA
Trigger: CGCAGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000115461.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGGGCCCACGGTTGCTaGGGGCTGGTCGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGAHGC*GLVGQD
Trigger: ATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPFRGPC*ERLGPR
Trigger: CCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACCACCGGTGCAGTCTaGCCCGGGGGAAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTTGAV*PGGNAG
Trigger: GCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCCAGGGCTATGCTCTaGGCCAGGCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPARAML*ARQSWP
Trigger: CGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGTGAGGGGGCTCCGTTaGGCAGTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPVRGLR*AVPQAG
Trigger: CCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCAC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGGGCCCACGGTTGCTaGGGGCTGGTCGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGAHGC*GLVGQD
Trigger: ATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGGGCCCACGGTTGCTaGGGGCTGGTCGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGAHGC*GLVGQD
Trigger: ATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFRGPC*ERLGPR
Trigger: CCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFRGPC*ERLGPR
Trigger: CCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCACCACCGGTGCAGTCTaGCCCGGGGGAAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVTTGAV*PGGNAG
Trigger: GCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLHSGG*TARGLG
Trigger: GCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCAGGGGCTGCACTCTaGACTCGGGAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAGAAL*TREAAL
Trigger: CAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSRTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGGAAACGCTGGCTGTaGGAGTCCAGGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGKRWL*ESRGPG
Trigger: GCCAGGTCCCCTGGACTCCCACAGCCAGCGTTTCCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTAGACATGGGGAGCTaGGCCAGGACGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVDMGS*ARTGRG
Trigger: GCCCCTGCCCGTCCTGGCCCAGCTCCCCATGTCTAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTGAGGGGGCTCCGTTaGGCAGTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVRGLR*AVPQAG
Trigger: CCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCAGGGGCTGCACTCTaGACTCGGGAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAGAAL*TREAAL
Trigger: CAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCAGGGGCTGCACTCTaGACTCGGGAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAGAAL*TREAAL
Trigger: CAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCAATGGCTGCTCCCTaGGACCGGTCATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPMAAP*DRSSGR
Trigger: CCGGCCAGATGACCGGTCGCAGGGAGCAGCCATTGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAATGGCTGCTCCCTaGGACCGGTCATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPMAAP*DRSSGR
Trigger: CCGGCCAGATGACCGGTCGCAGGGAGCAGCCATTGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTGTGTGGGCACCATaGTGCCCTCAGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAVWAP*CPQTLG
Trigger: GCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTCCTGAGCCCCCACTaGTGCCCTTGCCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLLSPH*CPCPNS
Trigger: TGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPEAWGS*LHRVLL
Trigger: CAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGACTGCCTCCCGTCTaGGGAGGAGTGGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRLPPV*GGVGVE
Trigger: CTCCACACCCACTCCTCCCCAGACGGGAGGCAGTCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAGGCACCAGGGCCGTaGAAACCTGGAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPEAPGP*KPGEDW
Trigger: CCAGTCCTCTCCAGGTTTCCACGGCCCTGGTGCCTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAKHHR*SLPRGK
Trigger: TTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTTGAGGCTCCAGACTaGCTCCCGTCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVEAPD*LPSGEE
Trigger: CTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTCTGTGCCAGGGCTATaGTCTGGGCCAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSVPGL*SGPGSP
Trigger: AGGACTGCCTGGCCCAGAGCATAGCCCTGGCACAGA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTGTGTGGGCACCATaGTGCCCTCAGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAVWAP*CPQTLG
Trigger: GCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCCTGAGCCCCCACTaGTGCCCTTGCCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLLSPH*CPCPNS
Trigger: TGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTCCTGAGCCCCCACTaGTGCCCTTGCCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLLSPH*CPCPNS
Trigger: TGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTCTGTGAGGCTAGCTaGCTTGCGGAGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLCEAS*LAESLR
Trigger: CCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSEAWGS*LHRVLL
Trigger: CAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTWIEA*GSWLHR
Trigger: CCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGTAGGGCTTGCACCTaGATAGAAGCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGRACT*IEAWGS
Trigger: GGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGACTGCCTCCCGTCTaGGGAGGAGTGGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVRLPPV*GGVGVE
Trigger: CTCCACACCCACTCCTCCCCAGACGGGAGGCAGTCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGAGGCACCAGGGCCGTaGAAACCTGGAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVEAPGP*KPGEDW
Trigger: CCAGTCCTCTCCAGGTTTCCACGGCCCTGGTGCCTC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGAGGCACCAGGGCCGTaGAAACCTGGAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSEAPGP*KPGEDW
Trigger: CCAGTCCTCTCCAGGTTTCCACGGCCCTGGTGCCTC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTGCCCTCAGACTCTaGGCTTGGGTTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAALRL*AWVAAS
Trigger: ACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCGAGTTTCCTTTCGTaGGCCCTGCTGAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPASFLS*ALLRAP
Trigger: AGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSLRLG*PLSTSL
Trigger: GAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAAGGCGACGAAGGCTaGGATTCTGTGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPEGDEG*DSVPGL
Trigger: TAGCCCTGGCACAGAATCTCAGCCTTCGTCGCCTTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCACTTTCAGCGCCATaGGGCAGCGGCACATGTTGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVALSAP*GSGTCW
Trigger: CCAACATGTGCCGCTGCCTCATGGCGCTGAAAGTGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPDLGEP*GVNGAT
Trigger: AGTCGCCCCATTGACACCTCACGGCTCACCAAGATC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAKHHR*SLPRGK
Trigger: TTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSVWAPC*PQTLGL
Trigger: CAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACAC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVWAPC*PQTLGL
Trigger: CAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCTGTGAGGCTAGCTaGCTTGCGGAGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLCEAS*LAESLR
Trigger: CCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCCACACCCTTGCCCTaGTGTTCAGCAGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPATPLP*CSAGSL
Trigger: CAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVTWIEA*GSWLHR
Trigger: CCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGTAGGGCTTGCACCTaGATAGAAGCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGRACT*IEAWGS
Trigger: GGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGAGGCGACTCCCCATTaGGTTGAGGCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSEATPH*VEAPDC
Trigger: GCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGAGGCGACTCCCCATTaGGTTGAGGCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVEATPH*VEAPDC
Trigger: GCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCAGGCTGGGCAGTTaGAGCAATGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLRLGS*SNGHER
Trigger: TCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSSSSG*AVGAMG
Trigger: GCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACAGACACTGCCACCTaGGTAGCTGCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTDTAT*VAAATS
Trigger: AGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTGCCCTCAGACTCTaGGCTTGGGTTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAALRL*AWVAAS
Trigger: ACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTTCCTCAGGCTGTGTaGGCACCATGCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPFPQAV*APCCPQ
Trigger: CTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCGAGTTTCCTTTCGTaGGCCCTGCTGAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVASFLS*ALLRAP
Trigger: AGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSLRLG*PLSTSL
Trigger: GAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSLRLG*PLSTSL
Trigger: GAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGTGAAGCCAGCTCCTaGACACACTGTACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGEASS*THCTAS
Trigger: GGAGGCAGTACAGTGTGTCCAGGAGCTGGCTTCACC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCCGCACAGAGCAGTTaGTGCAGTAGTCGCCCCATA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPAQSS*CSSRPI
Trigger: TATGGGGCGACTACTGCACCAACTGCTCTGTGCGGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGCAGGAGAAGTATCTaGAGGAGCCACAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSRRSI*RSHRWS
Trigger: GCTCCACCTGTGGCTCCTTCAGATACTTCTCCTGCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVDLGEP*GVNGAT
Trigger: AGTCGCCCCATTGACACCTCACGGCTCACCAAGATC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSDLGEP*GVNGAT
Trigger: AGTCGCCCCATTGACACCTCACGGCTCACCAAGATC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSQSNTR*LLPPSF
Trigger: GAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CGTGTCCATGGCTCCAAGTCCCCTGCCCCACCCGCCATCAGTTGTGATCAGACTGCAGGGGCTGCACTCTaGACTCGGGAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RVHGSKSPAPPAISCDQTAGAAL*TREAAL
Trigger: CAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGC...AGTCTGATCACAACTGATGGCGGGTGGGGCAGGGGACTTGGAGCCATGGACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACACTAGCAGGAAACTaGTGCACACCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTLAGN*CTPWAG
Trigger: CCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAGCAGGAGAGAGAATaGTGGCCAGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPEQERE*WPVLLM
Trigger: CATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTTTGGCACAGACACTaGCACCTGGGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLWHRH*HLGSCC
Trigger: GCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTTGGCACAGACACTaGCACCTGGGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLWHRH*HLGSCC
Trigger: GCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTLGLG*CQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVTLGLG*CQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTHADY*RRPSAA
Trigger: AGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCAGCAGGATCCTTGCTaGTCTCCCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPQQDPC*SPSCRR
Trigger: CCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCCACACCCTTGCCCTaGTGTTCAGCAGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVATPLP*CSAGSL
Trigger: CAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGKSGF*REAIRL
Trigger: GAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGGCCGTGGAAACCTaGAGAGGACTGGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRAVET*RGLEEN
Trigger: GTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSSSSG*AVGAMG
Trigger: GCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACAGACACTGCCACCTaGGTAGCTGCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTDTAT*VAAATS
Trigger: AGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTTCCTCAGGCTGTGTaGGCACCATGCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFPQAV*APCCPQ
Trigger: CTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGGTGGCAGGTGTTCTaGCACGATCAAGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVWWQVF*HDQVGP
Trigger: GGGACCGACTTGATCGTGCCAGAACACCTGCCACCA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTGGTGGCAGGTGTTCTaGCACGATCAAGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSWWQVF*HDQVGP
Trigger: GGGACCGACTTGATCGTGCCAGAACACCTGCCACCA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCACAGAGCAGTTaGTGCAGTAGTCGCCCCATA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPAQSS*CSSRPI
Trigger: TATGGGGCGACTACTGCACCAACTGCTCTGTGCGGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGCAGGAGAAGTATCTaGAGGAGCCACAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSRRSI*RSHRWS
Trigger: GCTCCACCTGTGGCTCCTTCAGATACTTCTCCTGCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAAGTGCTGGCGGGGCTaGGAAGGCGTGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVKCWRG*EGVFIC
Trigger: ACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000073840.12
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAACTCGGTAGGGCTTaGACCTGGATAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKLGRA*TWIEAW
Trigger: CCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACACTAGCAGGAAACTaGTGCACACCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTLAGN*CTPWAG
Trigger: CCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAAGGCTGAGATTCTGTaGCAGGGCTATGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSKAEIL*QGYALG
Trigger: GCCCAGAGCATAGCCCTGGCACAGAATCTCAGCCTT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAAGGCTGAGATTCTGTaGCAGGGCTATGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVKAEIL*QGYALG
Trigger: GCCCAGAGCATAGCCCTGGCACAGAATCTCAGCCTT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGAGCAGGAGAGAGAATaGTGGCCAGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVEQERE*WPVLLM
Trigger: CATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGCAGGATCCTTGCTaGTCTCCCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSQQDPC*SPSCRR
Trigger: CCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTGGGACAACATATGTaGAACGCCCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLGQHM*NAPVQG
Trigger: TCCCTGGACAGGGGCGTTCCACATATGTTGTCCCAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGKSGF*REAIRL
Trigger: GAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTGATTCTCTACCTCTaGTACTGCTGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLILYL*YCWVHL
Trigger: GAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLGCCQ*EADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCTGCTGAGAGCGCCTaGGTCCCAGGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATPAESA*VPGQPA
Trigger: GGCCGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGCGGAACAGGTCCTaGGTCTTGCTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLRNRS*VLLPSA
Trigger: TGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGCGGAACAGGTCCTaGGTCTTGCTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLRNRS*VLLPSA
Trigger: TGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTATGCTCACGAGCAATaGTACTACGCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPYAHEQ*YYAPAW
Trigger: CCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTATAATGACAGCAACCTaGGGCGACTCCCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSIMTAT*GDSPLG
Trigger: ACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTAT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATAATGACAGCAACCTaGGGCGACTCCCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVIMTAT*GDSPLG
Trigger: ACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCATGCTGGCAAAGATaGACTGAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVACWQR*TESPAG
Trigger: TCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAAGCCGTACGAAGATaGAGAGCAAGGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVQAVRR*RARRVK
Trigger: CTTCACCCTCCTTGCTCTTCATCTTCGTACGGCTTG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAAGCCGTACGAAGATaGAGAGCAAGGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSQAVRR*RARRVK
Trigger: CTTCACCCTCCTTGCTCTTCATCTTCGTACGGCTTG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCGCACTTTCAACACTTaGACATCCACTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRTFNT*TSTRRG
Trigger: TCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTTGGTGCAGTAGTCGCCCCATATGCTCACGAGCAATGGTACTACGCTCCAGCAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SWCSSRPICSRAMVLRSSRTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...GCTGGAGCGTAGTACCATTGCTCGTGAGCATATGGGGCGACTACTGCACCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGCTGCACAGGGTACTaGTGTGTTGGGACAACATAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGCTGY*CVGTTY
Trigger: ATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAAACTCGGTAGGGCTTaGACCTGGATAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVKLGRA*TWIEAW
Trigger: CCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGGGCCACAGTTTATaGCAGGTAGTCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLGHSL*QVVWRD
Trigger: ATCCCTCCAGACTACCTGGCATAAACTGTGGCCCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAGCTGCTGTCCGTTTaGTACTGGGTTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVQLLSV*YWVSKP
Trigger: AGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTCGATCCTTATCAGCTaGTGTCCGTTTGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSILIS*CPFATG
Trigger: CCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACAGGTCCTGGGTCTTaGTTCCATCAGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTGPGS*FHQHPL
Trigger: AAGAGGATGCTGATGGAAGCAAGACCCAGGACCTGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTTCAGCAGGATCCTTaGTGCTCTCCCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVQQDP*CSPSCR
Trigger: TCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGTTCAGCAGGATCCTTaGTGCTCTCCCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSVQQDP*CSPSCR
Trigger: TCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAAC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTGGGACAACATATGTaGAACGCCCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLGQHM*NAPVQG
Trigger: TCCCTGGACAGGGGCGTTCCACATATGTTGTCCCAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLVHQN*GRSHTS
Trigger: GCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGAGCAATCTGGGGTaGCTGGTTCATCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRSNLG*LVHQNW
Trigger: CCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCCAGATCCTCAGATaGGATCACGCCATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFQILR*DHAIGL
Trigger: GAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTCCAGATCCTCAGATaGGATCACGCCATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFQILR*DHAIGL
Trigger: GAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTGATGAAACCTTCTTaGCCTGTTCCTCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLMKPS*PVPLAH
Trigger: GTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTTCCGTCTCCTCTTTaGCACAGACACTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFPSPL*HRHCHL
Trigger: CAGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGATTCTCTACCTCTaGTACTGCTGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLILYL*YCWVHL
Trigger: GAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLGCCQ*EADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCTGCTGAGAGCGCCTaGGTCCCAGGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPPAESA*VPGQPA
Trigger: GGCCGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTACTACGCTCCAGCGTaGACTCGATACCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSYYAPA*TRYQAV
Trigger: TACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTACTACGCTCCAGCGTaGACTCGATACCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVYYAPA*TRYQAV
Trigger: TACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTATGCTCACGAGCAATaGTACTACGCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSYAHEQ*YYAPAW
Trigger: CCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCATCCCCACCTTTTTaGGACCCATGCTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPASPPF*DPCSCI
Trigger: TATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTCATTTGTGTCGCTTaGGGCGTGCTAAACACCACC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFICVA*GVLNTT
Trigger: GGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCATTTGTGTCGCTTaGGGCGTGCTAAACACCACC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFICVA*GVLNTT
Trigger: GGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGGGGCCCACGGTTGCTaGGGGCTGGTCGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATGAHGC*GLVGQD
Trigger: ATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFRGPC*ERLGPR
Trigger: CCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACCACCGGTGCAGTCTaGCCCGGGGGAAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTTGAV*PGGNAG
Trigger: GCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLHSGG*TARGLG
Trigger: GCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGCTGCACAGGGTACTaGTGTGTTGGGACAACATAT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGCTGY*CVGTTY
Trigger: ATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGCTGCACAGGGTACTaGTGTGTTGGGACAACATAT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGCTGY*CVGTTY
Trigger: ATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTGTACTCATACTTCTaGTCCCCAGGCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLYSYF*SPGWMF
Trigger: GAACATCCAGCCTGGGGAGCAGAAGTATGAGTACAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCGATCCTTATCAGCTaGTGTCCGTTTGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSILIS*CPFATG
Trigger: CCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCGATCCTTATCAGCTaGTGTCCGTTTGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSILIS*CPFATG
Trigger: CCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACAGGTCCTGGGTCTTaGTTCCATCAGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTGPGS*FHQHPL
Trigger: AAGAGGATGCTGATGGAAGCAAGACCCAGGACCTGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCGAGGCTTGGCTTTTaGAAAGTCCAGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSRLGF*KVQVFA
Trigger: GGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCAGTCGTCCTCCAGGTaGAAAAAGCTGGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPQSSSR*KKLVVR
Trigger: TCTAACAACCAGCTTTTTGCACCTGGAGGACGACTG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGCAGCTTCTCTAGCTaGCTACGAAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSSFSS*LRSSSK
Trigger: CTTTGAGGAGCTTCGTAGGCAGCTAGAGAAGCTGCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGGAGCAATCTGGGGTaGCTGGTTCATCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVRSNLG*LVHQNW
Trigger: CCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTTCCCTCCTTGGTTTaGGTCTCGAATTCGGATAGT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLPSLV*VSNSDS
Trigger: ACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCCAGGGCTATGCTCTaGGCCAGGCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATARAML*ARQSWP
Trigger: CGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTTCTACTTCCAGTATaGGTTCGGCAAGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLLLPV*VRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCATGGGATCACGCCATTaGGCTCATGAGTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPMGSRH*AHEFQP
Trigger: AGGTTGAAACTCATGAGCCCAATGGCGTGATCCCAT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGATGAAACCTTCTTaGCCTGTTCCTCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLMKPS*PVPLAH
Trigger: GTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGATGGAGTGAAATCTaGGCCACAGTTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRWSEI*ATVYAR
Trigger: CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSAYSG*SVPCGT
Trigger: TGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPTIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCATCCCCACCTTTTTaGGACCCATGCTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVASPPF*DPCSCI
Trigger: TATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCATCCCCACCTTTTTaGGACCCATGCTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSASPPF*DPCSCI
Trigger: TATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLEWVC*VSLLLP
Trigger: TGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLEWVC*VSLLLP
Trigger: TGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTCCATTTCTTCCTCCTaGGCAGGAGAAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSISSS*AGEVSE
Trigger: TTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTGGCAAAAGATGGAGTaGAATCTGGGCCACAGTTTA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPWQKME*NLGHSL
Trigger: TAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPFRGPC*ERLGPR
Trigger: CCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACCACCGGTGCAGTCTaGCCCGGGGGAAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTTGAV*PGGNAG
Trigger: GCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALHSGG*TARGLG
Trigger: GCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCAATGGCTGCTCCCTaGGACCGGTCATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATPMAAP*DRSSGR
Trigger: CCGGCCAGATGACCGGTCGCAGGGAGCAGCCATTGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTGTACTCATACTTCTaGTCCCCAGGCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLYSYF*SPGWMF
Trigger: GAACATCCAGCCTGGGGAGCAGAAGTATGAGTACAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTGTACTCATACTTCTaGTCCCCAGGCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLYSYF*SPGWMF
Trigger: GAACATCCAGCCTGGGGAGCAGAAGTATGAGTACAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAATCCTTCTGGCTTCTaGATGCTGGCAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPNPSGF*MLAKMN
Trigger: GTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTAATATGTTCTCGGTaGTCTTCCATCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLICSR*SSISAS
Trigger: GGAGGCTGAGATGGAAGAGCACCGAGAACATATTAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAGTCGTCCTCCAGGTaGAAAAAGCTGGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVQSSSR*KKLVVR
Trigger: TCTAACAACCAGCTTTTTGCACCTGGAGGACGACTG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSSRPI*SRAMVL
Trigger: TAGTACCATTGCTCGTGAGCATATGGGGCGACTACT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSSRPI*SRAMVL
Trigger: TAGTACCATTGCTCGTGAGCATATGGGGCGACTACT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTTTTTGGGACCCATaGTCTTGCATAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPFWDP*SCIRDP
Trigger: TGGGTCTCTTATGCAAGAGCATGGGTCCCAAAAAGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCACACAGGTATTTCTaGAGCAGTCTTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSHRYF*SSLART
Trigger: AGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSRVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVRVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTTCCCTCCTTGGTTTaGGTCTCGAATTCGGATAGT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLPSLV*VSNSDS
Trigger: ACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCCCTCCTTGGTTTaGGTCTCGAATTCGGATAGT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLPSLV*VSNSDS
Trigger: ACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATATCCTTCCCTCCTTaGTTTGGGTCTCGAATTCGG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVISFPP*FGSRIR
Trigger: CCGAATTCGAGACCCAAACCAAGGAGGGAAGGATAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCCAGGGCTATGCTCTaGGCCAGGCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPARAML*ARQSWP
Trigger: CGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCCAGGGCTATGCTCTaGGCCAGGCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAARAML*ARQSWP
Trigger: CGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCTACTTCCAGTATaGGTTCGGCAAGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLLLPV*VRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTATGGGATCACGCCATTaGGCTCATGAGTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSMGSRH*AHEFQP
Trigger: AGGTTGAAACTCATGAGCCCAATGGCGTGATCCCAT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATGGGATCACGCCATTaGGCTCATGAGTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVMGSRH*AHEFQP
Trigger: AGGTTGAAACTCATGAGCCCAATGGCGTGATCCCAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCATCCAGTTGCCGAAGTaGTGTTTTATTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPIQLPK*CFIGLV
Trigger: GACAAGGCCAATAAAACACCACTTCGGCAACTGGAT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSTIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGTGAGGGGGCTCCGTTaGGCAGTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPVRGLR*AVPQAG
Trigger: CCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCAC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCCATTTCTTCCTCCTaGGCAGGAGAAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSISSS*AGEVSE
Trigger: TTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCCATTTCTTCCTCCTaGGCAGGAGAAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSISSS*AGEVSE
Trigger: TTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTTAGAGGCTTCCACTaGTCTGACTTGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPFRGFH*SDLYSY
Trigger: GTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTGGCAAAAGATGGAGTaGAATCTGGGCCACAGTTTA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSWQKME*NLGHSL
Trigger: TAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGGGCCCACGGTTGCTaGGGGCTGGTCGGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGAHGC*GLVGQD
Trigger: ATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGAGAAGTTGGGCTCTaGAATGGCTTTCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPREVGL*NGFLKD
Trigger: ATCTTTGAGAAAGCCATTTCAGAGCCCAACTTCTCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAGNVC*RAEKRF
Trigger: GAATCGCTTTTCTGCTCTTCAACAAACATTACCCGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAGNVC*RAEKRF
Trigger: GAATCGCTTTTCTGCTCTTCAACAAACATTACCCGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAACAGACAGTTGTCATaGGGGCTCGAACTAATGTAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPNRQLS*GLELMY
Trigger: ATACATTAGTTCGAGCCCTCATGACAACTGTCTGTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLHSGG*TARGLG
Trigger: GCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCAGGGGCTGCACTCTaGACTCGGGAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAGAAL*TREAAL
Trigger: CAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGGACGGGCAGGGGCTaGACTCTGCACTCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRTGRG*TLHSGG
Trigger: GCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGTTGAGGCTCCAGACTaGCTCCCGTCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATVEAPD*LPSGEE
Trigger: CTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAAC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCAATGGCTGCTCCCTaGGACCGGTCATCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAPMAAP*DRSSGR
Trigger: CCGGCCAGATGACCGGTCGCAGGGAGCAGCCATTGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAATCCTTCTGGCTTCTaGATGCTGGCAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVNPSGF*MLAKMN
Trigger: GTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTAATATGTTCTCGGTaGTCTTCCATCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLICSR*SSISAS
Trigger: GGAGGCTGAGATGGAAGAGCACCGAGAACATATTAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPLAMS*CTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTCCTGAGCCCCCACTaGTGCCCTTGCCCCAACTCA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLLSPH*CPCPNS
Trigger: TGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTTGTAGCTCCTTCTaGTCATCACACAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVACSSF*SSHRYF
Trigger: GAAATACCTGTGTGATGAGCAGAAGGAGCTACAAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGGGAAACGCTGGCTGTaGGAGTCCAGGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPGKRWL*ESRGPG
Trigger: GCCAGGTCCCCTGGACTCCCACAGCCAGCGTTTCCC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGGGCTATGCTCTaGGCCAGGCAGTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTARAML*ARQSWP
Trigger: CGGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTATCCAGTTGCCGAAGTaGTGTTTTATTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSIQLPK*CFIGLV
Trigger: GACAAGGCCAATAAAACACCACTTCGGCAACTGGAT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATCCAGTTGCCGAAGTaGTGTTTTATTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVIQLPK*CFIGLV
Trigger: GACAAGGCCAATAAAACACCACTTCGGCAACTGGAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAGATTGGCAAAAGATaGAGTGAAATCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKIGKR*SEIWAT
Trigger: TGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGTGCTGCAGAGACCTaGATCCTCCCTGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASAAET*ILPGGA
Trigger: AGCCCCGCCAGGGAGGATTCAGGTCTCTGCAGCACT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044783.14
ENSMUST00000115460.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGTGAGGGGGCTCCGTTaGGCAGTTCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTVRGLR*AVPQAG
Trigger: CCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCAC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTTAGAGGCTTCCACTaGTCTGACTTGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFRGFH*SDLYSY
Trigger: GTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTTAGAGGCTTCCACTaGTCTGACTTGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFRGFH*SDLYSY
Trigger: GTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTCAGTCATTATCACTaGGGAAATGATCTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPFSHYH*GNDLAS
Trigger: ACTCGCAAGATCATTTCCTCAGTGATAATGACTGAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATTTGGTTGAAATACTaGTCCATTCGAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVIWLKY*SIRGLA
Trigger: AGCCAAGCCTCGAATGGATCAGTATTTCAACCAAAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTATTTGGTTGAAATACTaGTCCATTCGAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSIWLKY*SIRGLA
Trigger: AGCCAAGCCTCGAATGGATCAGTATTTCAACCAAAT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGTCCTCTGGCCAGGAGCTTCAGATTCTTCTCCCAAGGTATATTCCACCTTCTTACCACCGGTGCAGTCTaGCCCGGGGGAAACGCTGGC +
Preference number: 4 (lower is better)
Translates to: CPLARSFRFFSQGIFHLLTTGAV*PGGNAG
Trigger: GCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGT...AAGAAGGTGGAATATACCTTGGGAGAAGAATCTGAAGCTCCTGGCCAGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGTTGAGGCTCCAGACTaGCTCCCGTCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAVEAPD*LPSGEE
Trigger: CTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAAC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGTTGAGGCTCCAGACTaGCTCCCGTCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPVEAPD*LPSGEE
Trigger: CTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAAC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATVWAPC*PQTLGL
Trigger: CAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACAC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGTGTGGGCACCATaGTGCCCTCAGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAVWAP*CPQTLG
Trigger: GCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPLAMS*CTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAGCCAATTGAAGAATaGTGTGACAGATTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKPIEE*CDRFKG
Trigger: GCCCTTAAATCTGTCACAGCATTCTTCAATTGGCTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGGAAACGCTGGCTGTaGGAGTCCAGGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGKRWL*ESRGPG
Trigger: GCCAGGTCCCCTGGACTCCCACAGCCAGCGTTTCCC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTWIEA*GSWLHR
Trigger: CCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGGTAGGGCTTGCACCTaGATAGAAGCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATGRACT*IEAWGS
Trigger: GGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGACTGCCTCCCGTCTaGGGAGGAGTGGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARLPPV*GGVGVE
Trigger: CTCCACACCCACTCCTCCCCAGACGGGAGGCAGTCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGAGGCGACTCCCCATTaGGTTGAGGCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATEATPH*VEAPDC
Trigger: GCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSRELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVRELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGAGGCACCAGGGCCGTaGAAACCTGGAGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPEAPGP*KPGEDW
Trigger: CCAGTCCTCTCCAGGTTTCCACGGCCCTGGTGCCTC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTCAGGCTGGGCAGTTaGAGCAATGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLRLGS*SNGHER
Trigger: TCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTCAGACTCTGGGCTTaGGTTGCTGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLRLWA*VAASGR
Trigger: CCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAAGATTGGCAAAAGATaGAGTGAAATCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSKIGKR*SEIWAT
Trigger: TGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAAGATTGGCAAAAGATaGAGTGAAATCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVKIGKR*SEIWAT
Trigger: TGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAA +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPGAKS*LLESME
Trigger: TTCCATTGATTCTAACAACCAGCTTTTTGCACCTGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSLRLG*PLSTSL
Trigger: GAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGTGCTGCAGAGACCTaGATCCTCCCTGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSAAET*ILPGGA
Trigger: AGCCCCGCCAGGGAGGATTCAGGTCTCTGCAGCACT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044783.14
ENSMUST00000115460.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTCAGTCATTATCACTaGGGAAATGATCTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFSHYH*GNDLAS
Trigger: ACTCGCAAGATCATTTCCTCAGTGATAATGACTGAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCAGTCATTATCACTaGGGAAATGATCTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFSHYH*GNDLAS
Trigger: ACTCGCAAGATCATTTCCTCAGTGATAATGACTGAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCACTTTCAGCGCCATaGGGCAGCGGCACATGTTGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAALSAP*GSGTCW
Trigger: CCAACATGTGCCGCTGCCTCATGGCGCTGAAAGTGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCACTTTCAGCGCCATaGGGCAGCGGCACATGTTGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPALSAP*GSGTCW
Trigger: CCAACATGTGCCGCTGCCTCATGGCGCTGAAAGTGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAAACGGATGCGAGATaGGGTCTTCTTTTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKTDAR*GLLFFN
Trigger: ATTAAAGAAAAGAAGACCTCATCTCGCATCCGTTTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATQSNTR*LLPPSF
Trigger: GAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPAKHHR*SLPRGK
Trigger: TTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAKHHR*SLPRGK
Trigger: TTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGTTGAGGCTCCAGACTaGCTCCCGTCTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTVEAPD*LPSGEE
Trigger: CTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAAC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCTGTGCCAGGGCTATaGTCTGGGCCAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASVPGL*SGPGSP
Trigger: AGGACTGCCTGGCCCAGAGCATAGCCCTGGCACAGA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTTTGGCACAGACACTaGCACCTGGGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLWHRH*HLGSCC
Trigger: GCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTLGLG*CQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPVWAPC*PQTLGL
Trigger: CAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACAC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCTGTGTGGGCACCATaGTGCCCTCAGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTAVWAP*CPQTLG
Trigger: GCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTCTGTGAGGCTAGCTaGCTTGCGGAGTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALCEAS*LAESLR
Trigger: CCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTEAWGS*LHRVLL
Trigger: CAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTWIEA*GSWLHR
Trigger: CCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGGTAGGGCTTGCACCTaGATAGAAGCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAGRACT*IEAWGS
Trigger: GGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGACTGCCTCCCGTCTaGGGAGGAGTGGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRLPPV*GGVGVE
Trigger: CTCCACACCCACTCCTCCCCAGACGGGAGGCAGTCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGAGGCGACTCCCCATTaGGTTGAGGCTCCAGACTGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAEATPH*VEAPDC
Trigger: GCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTCAGGCTGGGCAGTTaGAGCAATGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLRLGS*SNGHER
Trigger: TCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTCAGGCTGGGCAGTTaGAGCAATGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALRLGS*SNGHER
Trigger: TCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSSSSG*AVGAMG
Trigger: GCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACAGACACTGCCACCTaGGTAGCTGCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTDTAT*VAAATS
Trigger: AGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTCAGACTCTGGGCTTaGGTTGCTGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALRLWA*VAASGR
Trigger: CCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTCAGACTCTGGGCTTaGGTTGCTGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLRLWA*VAASGR
Trigger: CCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGCCCTCAGACTCTaGGCTTGGGTTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPAALRL*AWVAAS
Trigger: ACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGCCCTCAGACTCTaGGCTTGGGTTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAALRL*AWVAAS
Trigger: ACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCGAGTTTCCTTTCGTaGGCCCTGCTGAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPASFLS*ALLRAP
Trigger: AGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALIPSA*HPITLP
Trigger: CGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAA +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPGAKS*LLESME
Trigger: TTCCATTGATTCTAACAACCAGCTTTTTGCACCTGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPSLRLG*PLSTSL
Trigger: GAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGGTGAAGCCAGCTCCTaGACACACTGTACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATGEASS*THCTAS
Trigger: GGAGGCAGTACAGTGTGTCCAGGAGCTGGCTTCACC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CGCTCCAGCGTGGACTCGATACCAAGCCGTACGAAGATGAAGAGCAAGGAGGGTTTCATTTGTGTCGCTTaGGGCGTGCTAAACACCACC +
Preference number: 4 (lower is better)
Translates to: RSSVDSIPSRTKMKSKEGFICVA*GVLNTT
Trigger: GGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAA...ACCCTCCTTGCTCTTCATCTTCGTACGGCTTGGTATCGAGTCCACGCTGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCTCCCTGGCGGGGCTaGGAAGGCGTGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPPWRG*EGVFIC
Trigger: ACAAATGAACACGCCTTCTCAGCCCCGCCAGGGAGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044783.14
ENSMUST00000115460.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGAAGGCGACGAAGGCTaGGATTCTGTGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAEGDEG*DSVPGL
Trigger: TAGCCCTGGCACAGAATCTCAGCCTTCGTCGCCTTC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGAAGGCGACGAAGGCTaGGATTCTGTGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPEGDEG*DSVPGL
Trigger: TAGCCCTGGCACAGAATCTCAGCCTTCGTCGCCTTC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGCAGGAGAAGTATCTaGAGGAGCCACAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSRRSI*RSHRWS
Trigger: GCTCCACCTGTGGCTCCTTCAGATACTTCTCCTGCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAAAACGGATGCGAGATaGGGTCTTCTTTTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSKTDAR*GLLFFN
Trigger: ATTAAAGAAAAGAAGACCTCATCTCGCATCCGTTTT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTATAGTCTTAGGACCCTaGTCCCCTCGGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTIVLGP*SPRRGT
Trigger: GGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTAT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTADLGEP*GVNGAT
Trigger: AGTCGCCCCATTGACACCTCACGGCTCACCAAGATC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPDLGEP*GVNGAT
Trigger: AGTCGCCCCATTGACACCTCACGGCTCACCAAGATC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPQSNTR*LLPPSF
Trigger: GAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAGTGCTGGCGGGGCTaGGAAGGCGTGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATKCWRG*EGVFIC
Trigger: ACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000073840.12
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHFQHLNIHSERSLKDNCLHSGG*TARGLG
Trigger: GCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAG...GCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACACTAGCAGGAAACTaGTGCACACCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTLAGN*CTPWAG
Trigger: CCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCTGTGCCAGGGCTATaGTCTGGGCCAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSVPGL*SGPGSP
Trigger: AGGACTGCCTGGCCCAGAGCATAGCCCTGGCACAGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTTTGGCACAGACACTaGCACCTGGGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLWHRH*HLGSCC
Trigger: GCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTATLGLG*CQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTVWAPC*PQTLGL
Trigger: CAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACAC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCCACACCCTTGCCCTaGTGTTCAGCAGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAATPLP*CSAGSL
Trigger: CAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGTAGGGCTTGCACCTaGATAGAAGCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGRACT*IEAWGS
Trigger: GGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATGKSGF*REAIRL
Trigger: GAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTCAGGCTGGGCAGTTaGAGCAATGGGCACGAGCGA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLRLGS*SNGHER
Trigger: TCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASSSSG*AVGAMG
Trigger: GCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACAGACACTGCCACCTaGGTAGCTGCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTATDTAT*VAAATS
Trigger: AGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTCAGACTCTGGGCTTaGGTTGCTGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLRLWA*VAASGR
Trigger: CCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTTCCTCAGGCTGTGTaGGCACCATGCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFPQAV*APCCPQ
Trigger: CTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCGAGTTTCCTTTCGTaGGCCCTGCTGAGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTASFLS*ALLRAP
Trigger: AGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTGGTGGCAGGTGTTCTaGCACGATCAAGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPWWQVF*HDQVGP
Trigger: GGGACCGACTTGATCGTGCCAGAACACCTGCCACCA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTGGTGGCAGGTGTTCTaGCACGATCAAGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAWWQVF*HDQVGP
Trigger: GGGACCGACTTGATCGTGCCAGAACACCTGCCACCA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGGTGAAGCCAGCTCCTaGACACACTGTACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAGEASS*THCTAS
Trigger: GGAGGCAGTACAGTGTGTCCAGGAGCTGGCTTCACC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCCGCACAGAGCAGTTaGTGCAGTAGTCGCCCCATA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAPAQSS*CSSRPI
Trigger: TATGGGGCGACTACTGCACCAACTGCTCTGTGCGGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTATAATGACAGCAACCTaGGGCGACTCCCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATIMTAT*GDSPLG
Trigger: ACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTAT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGAAGGCGACGAAGGCTaGGATTCTGTGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTEGDEG*DSVPGL
Trigger: TAGCCCTGGCACAGAATCTCAGCCTTCGTCGCCTTC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGCAGGAGAAGTATCTaGAGGAGCCACAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASRRSI*RSHRWS
Trigger: GCTCCACCTGTGGCTCCTTCAGATACTTCTCCTGCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGCAGGAGAAGTATCTaGAGGAGCCACAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPSRRSI*RSHRWS
Trigger: GCTCCACCTGTGGCTCCTTCAGATACTTCTCCTGCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCATGCTGGCAAAGATaGACTGAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATACWQR*TESPAG
Trigger: TCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGAAGAGCAAGGAGGGTaGAGCCAGCTCCTGGACACA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTEEQGG*SQLLDT
Trigger: TGTGTCCAGGAGCTGGCTTCACCCTCCTTGCTCTTC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCAAGCCGTACGAAGATaGAGAGCAAGGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATQAVRR*RARRVK
Trigger: CTTCACCCTCCTTGCTCTTCATCTTCGTACGGCTTG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGTCGAACACACGCTaGTTACTGCCGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTQSNTR*LLPPSF
Trigger: GAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAACTCGGTAGGGCTTaGACCTGGATAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATKLGRA*TWIEAW
Trigger: CCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACACTAGCAGGAAACTaGTGCACACCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTLAGN*CTPWAG
Trigger: CCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAAGGCTGAGATTCTGTaGCAGGGCTATGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPKAEIL*QGYALG
Trigger: GCCCAGAGCATAGCCCTGGCACAGAATCTCAGCCTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAAGGCTGAGATTCTGTaGCAGGGCTATGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAKAEIL*QGYALG
Trigger: GCCCAGAGCATAGCCCTGGCACAGAATCTCAGCCTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGAGCAGGAGAGAGAATaGTGGCCAGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPEQERE*WPVLLM
Trigger: CATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGAGCAGGAGAGAGAATaGTGGCCAGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAEQERE*WPVLLM
Trigger: CATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTTTGGCACAGACACTaGCACCTGGGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLWHRH*HLGSCC
Trigger: GCAGCAGCTACCCAGGTGGCAGTGTCTGTGCCAAAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTTLGLG*CQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTGGGCCACAGTTTATaGCAGGTAGTCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLGHSL*QVVWRD
Trigger: ATCCCTCCAGACTACCTGGCATAAACTGTGGCCCAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCAGCTGCTGTCCGTTTaGTACTGGGTTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATQLLSV*YWVSKP
Trigger: AGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTHADY*RRPSAA
Trigger: AGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTATHADY*RRPSAA
Trigger: AGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCAGCAGGATCCTTGCTaGTCTCCCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAQQDPC*SPSCRR
Trigger: CCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCAGCAGGATCCTTGCTaGTCTCCCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPQQDPC*SPSCRR
Trigger: CCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGTTCAGCAGGATCCTTaGTGCTCTCCCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATVQQDP*CSPSCR
Trigger: TCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAAC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACACCCTTGCCCTaGTGTTCAGCAGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTATPLP*CSAGSL
Trigger: CAAGGATCCTGCTGAACAGCAGGGCAAGGGTGTGGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTGGGACAACATATGTaGAACGCCCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLGQHM*NAPVQG
Trigger: TCCCTGGACAGGGGCGTTCCACATATGTTGTCCCAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGGGCCGTGGAAACCTaGAGAGGACTGGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARAVET*RGLEEN
Trigger: GTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGGGCCGTGGAAACCTaGAGAGGACTGGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRAVET*RGLEEN
Trigger: GTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTCCAGATCCTCAGATaGGATCACGCCATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFQILR*DHAIGL
Trigger: GAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTACAGACACTGCCACCTaGGTAGCTGCTGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTTDTAT*VAAATS
Trigger: AGAGGTGGCAGCAGCTACCCAGGTGGCAGTGTCTGT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTTCCGTCTCCTCTTTaGCACAGACACTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFPSPL*HRHCHL
Trigger: CAGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTGATTCTCTACCTCTaGTACTGCTGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLILYL*YCWVHL
Trigger: GAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLGCCQ*EADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTGCGGAACAGGTCCTaGGTCTTGCTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLRNRS*VLLPSA
Trigger: TGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGCGGAACAGGTCCTaGGTCTTGCTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALRNRS*VLLPSA
Trigger: TGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTGGTGGCAGGTGTTCTaGCACGATCAAGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTWWQVF*HDQVGP
Trigger: GGGACCGACTTGATCGTGCCAGAACACCTGCCACCA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCATGTCATTGAGATaGAGATATTCCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFMSLR*RYSSMM
Trigger: CATCATTGAGGAATATCTCCATCTCAATGACATGAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGTGAAGCCAGCTCCTaGACACACTGTACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGEASS*THCTAS
Trigger: GGAGGCAGTACAGTGTGTCCAGGAGCTGGCTTCACC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTACTACGCTCCAGCGTaGACTCGATACCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATYYAPA*TRYQAV
Trigger: TACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTATGCTCACGAGCAATaGTACTACGCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATYAHEQ*YYAPAW
Trigger: CCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCCGCACAGAGCAGTTaGTGCAGTAGTCGCCCCATA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPAQSS*CSSRPI
Trigger: TATGGGGCGACTACTGCACCAACTGCTCTGTGCGGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTCATTTGTGTCGCTTaGGGCGTGCTAAACACCACC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFICVA*GVLNTT
Trigger: GGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACCTCTAAATTCTaGGACAGCTGGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTATSKF*DSWAGT
Trigger: TGTCCCAGCCCAGCTGTCTCAGAATTTAGAGGTGGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCATGCTGGCAAAGATaGACTGAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPACWQR*TESPAG
Trigger: TCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCATGCTGGCAAAGATaGACTGAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAACWQR*TESPAG
Trigger: TCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAGTGCTGGCGGGGCTaGGAAGGCGTGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTKCWRG*EGVFIC
Trigger: ACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000073840.12
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp ATGAGGGCTCGAACTAATGTATTGGATGCTATCTGCTGCTCATTTAGGTTGGCGGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: MRARTNVLDAICCSFRLAAKHHR*SLPRGK
Trigger: TTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGC...CGCCAACCTAAATGAGCAGCAGATAGCATCCAATACATTAGTTCGAGCCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAAACTCGGTAGGGCTTaGACCTGGATAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPKLGRA*TWIEAW
Trigger: CCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTACACTAGCAGGAAACTaGTGCACACCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTTLAGN*CTPWAG
Trigger: CCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGAGCAGGAGAGAGAATaGTGGCCAGTGCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTEQERE*WPVLLM
Trigger: CATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGGGCCACAGTTTATaGCAGGTAGTCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALGHSL*QVVWRD
Trigger: ATCCCTCCAGACTACCTGGCATAAACTGTGGCCCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTGGGCCACAGTTTATaGCAGGTAGTCTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLGHSL*QVVWRD
Trigger: ATCCCTCCAGACTACCTGGCATAAACTGTGGCCCAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCAGCTGCTGTCCGTTTaGTACTGGGTTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAQLLSV*YWVSKP
Trigger: AGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACAGGTCCTGGGTCTTaGTTCCATCAGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTGPGS*FHQHPL
Trigger: AAGAGGATGCTGATGGAAGCAAGACCCAGGACCTGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCGAGGCTTGGCTTTTaGAAAGTCCAGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSRLGF*KVQVFA
Trigger: GGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCACAGAGCAGTTGGTaGAGTAGTCGCCCCATATGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTAQSSW*SSRPIC
Trigger: GCATATGGGGCGACTACTGCACCAACTGCTCTGTGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGCAGCTTCTCTAGCTaGCTACGAAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSSFSS*LRSSSK
Trigger: CTTTGAGGAGCTTCGTAGGCAGCTAGAGAAGCTGCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTACACACGCTGATTACTaGCGCCGTCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTTHADY*RRPSAA
Trigger: AGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGCAGGATCCTTGCTaGTCTCCCAGCTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTQQDPC*SPSCRR
Trigger: CCTTCTACAGCTGGGAGAGCAGCAAGGATCCTGCTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGTTCAGCAGGATCCTTaGTGCTCTCCCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAVQQDP*CSPSCR
Trigger: TCTACAGCTGGGAGAGCAGCAAGGATCCTGCTGAAC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CCAGGTAAAGCCATACATGAGGGATATCAATTTCCATGTCCTCAGCCAATTCTAGGGAAACGCTGGCTGTaGGAGTCCAGGGGACCTGGC +
Preference number: 4 (lower is better)
Translates to: PGKAIHEGYQFPCPQPILGKRWL*ESRGPG
Trigger: GCCAGGTCCCCTGGACTCCCACAGCCAGCGTTTCCC...TAGAATTGGCTGAGGACATGGAAATTGATATCCCTCATGTATGGCTTTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALVHQN*GRSHTS
Trigger: GCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLVHQN*GRSHTS
Trigger: GCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGGAGCAATCTGGGGTaGCTGGTTCATCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATRSNLG*LVHQNW
Trigger: CCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGKSGF*REAIRL
Trigger: GAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGGGCCGTGGAAACCTaGAGAGGACTGGAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRAVET*RGLEEN
Trigger: GTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTCCAGATCCTCAGATaGGATCACGCCATTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFQILR*DHAIGL
Trigger: GAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTTCCGTCTCCTCTTTaGCACAGACACTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFPSPL*HRHCHL
Trigger: CAGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGATTCTCTACCTCTaGTACTGCTGGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALILYL*YCWVHL
Trigger: GAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALGCCQ*EADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLGCCQ*EADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGCGGAACAGGTCCTaGGTCTTGCTTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLRNRS*VLLPSA
Trigger: TGCTGATGGAAGCAAGACCCAGGACCTGTTCCGCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSAYSG*SVPCGT
Trigger: TGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTACTACGCTCCAGCGTaGACTCGATACCAAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAYYAPA*TRYQAV
Trigger: TACGGCTTGGTATCGAGTCCACGCTGGAGCGTAGTA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTATGCTCACGAGCAATaGTACTACGCTCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAYAHEQ*YYAPAW
Trigger: CCACGCTGGAGCGTAGTACCATTGCTCGTGAGCATA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTATAATGACAGCAACCTaGGGCGACTCCCCATTGGGT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTIMTAT*GDSPLG
Trigger: ACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTAT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCATGCTGGCAAAGATaGACTGAAAGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTACWQR*TESPAG
Trigger: TCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCGCACTTTCAACACTTaGACATCCACTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRTFNT*TSTRRG
Trigger: TCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCGCACTTTCAACACTTaGACATCCACTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARTFNT*TSTRRG
Trigger: TCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGTCCTCTGGCCAGGAGCTTCAGATTCTTCTCCCAAGGTATATTCCACCTTCTTAAGTGCTGGCGGGGCTaGGAAGGCGTGTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CPLARSFRFFSQGIFHLLKCWRG*EGVFIC
Trigger: ACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTT...AAGAAGGTGGAATATACCTTGGGAGAAGAATCTGAAGCTCCTGGCCAGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGGCTGCACAGGGTACTaGTGTGTTGGGACAACATAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAGCTGY*CVGTTY
Trigger: ATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAACTCGGTAGGGCTTaGACCTGGATAGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTKLGRA*TWIEAW
Trigger: CCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGCTGCTGTCCGTTTaGTACTGGGTTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTQLLSV*YWVSKP
Trigger: AGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACAGGTCCTGGGTCTTaGTTCCATCAGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTGPGS*FHQHPL
Trigger: AAGAGGATGCTGATGGAAGCAAGACCCAGGACCTGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCGAGGCTTGGCTTTTaGAAAGTCCAGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASRLGF*KVQVFA
Trigger: GGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp GGCGTCTATCCAGTCGAACACACGCTGATTACTGCCGCCGTCCTTCAGCAGCTTCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCT +
Preference number: 4 (lower is better)
Translates to: GVYPVEHTLITAAVLQQLPLAMS*CTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGG...AAGCTGCTGAAGGACGGCGGCAGTAATCAGCGTGTGTTCGACTGGATAGACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231598.2
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCAGTCGTCCTCCAGGTaGAAAAAGCTGGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATQSSSR*KKLVVR
Trigger: TCTAACAACCAGCTTTTTGCACCTGGAGGACGACTG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCTTTTTGGGACCCATaGTCTTGCATAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATPFWDP*SCIRDP
Trigger: TGGGTCTCTTATGCAAGAGCATGGGTCCCAAAAAGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGCAGCTTCTCTAGCTaGCTACGAAGCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASSFSS*LRSSSK
Trigger: CTTTGAGGAGCTTCGTAGGCAGCTAGAGAAGCTGCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCACACAGGTATTTCTaGAGCAGTCTTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATSHRYF*SSLART
Trigger: AGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTGGGACAACATATGTaGAACGCCCCTGTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLGQHM*NAPVQG
Trigger: TCCCTGGACAGGGGCGTTCCACATATGTTGTCCCAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATRVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLVHQN*GRSHTS
Trigger: GCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGGAGCAATCTGGGGTaGCTGGTTCATCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRSNLG*LVHQNW
Trigger: CCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTTCCCTCCTTGGTTTaGGTCTCGAATTCGGATAGT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLPSLV*VSNSDS
Trigger: ACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTTCTACTTCCAGTATaGGTTCGGCAAGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLLLPV*VRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTTCCGTCTCCTCTTTaGCACAGACACTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTFPSPL*HRHCHL
Trigger: CAGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGATGGAGTGAAATCTaGGCCACAGTTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATRWSEI*ATVYAR
Trigger: CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTASAYSG*SVPCGT
Trigger: TGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPSAYSG*SVPCGT
Trigger: TGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATTIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCATCCCCACCTTTTTaGGACCCATGCTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPASPPF*DPCSCI
Trigger: TATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALEWVC*VSLLLP
Trigger: TGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTGGCAAAAGATGGAGTaGAATCTGGGCCACAGTTTA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATWQKME*NLGHSL
Trigger: TAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATAGNVC*RAEKRF
Trigger: GAATCGCTTTTCTGCTCTTCAACAAACATTACCCGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCGCACTTTCAACACTTaGACATCCACTCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRTFNT*TSTRRG
Trigger: TCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGCTGCACAGGGTACTaGTGTGTTGGGACAACATAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTGCTGY*CVGTTY
Trigger: ATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTGTACTCATACTTCTaGTCCCCAGGCTGGATGTTC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLYSYF*SPGWMF
Trigger: GAACATCCAGCCTGGGGAGCAGAAGTATGAGTACAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCGATCCTTATCAGCTaGTGTCCGTTTGCTACTGGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSILIS*CPFATG
Trigger: CCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTACAGGTCCTGGGTCTTaGTTCCATCAGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTTGPGS*FHQHPL
Trigger: AAGAGGATGCTGATGGAAGCAAGACCCAGGACCTGT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCGAGGCTTGGCTTTTaGAAAGTCCAGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSRLGF*KVQVFA
Trigger: GGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTAATATGTTCTCGGTaGTCTTCCATCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATLICSR*SSISAS
Trigger: GGAGGCTGAGATGGAAGAGCACCGAGAACATATTAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPSSRPI*SRAMVL
Trigger: TAGTACCATTGCTCGTGAGCATATGGGGCGACTACT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCTTTTTGGGACCCATaGTCTTGCATAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPPFWDP*SCIRDP
Trigger: TGGGTCTCTTATGCAAGAGCATGGGTCCCAAAAAGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGGGTACTGCTGTGTTaGGACAACATATGTGGAACG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRVLLC*DNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCATATCCTTCCCTCCTTaGTTTGGGTCTCGAATTCGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPISFPP*FGSRIR
Trigger: CCGAATTCGAGACCCAAACCAAGGAGGGAAGGATAT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCATATCCTTCCCTCCTTaGTTTGGGTCTCGAATTCGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAISFPP*FGSRIR
Trigger: CCGAATTCGAGACCCAAACCAAGGAGGGAAGGATAT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTTCTACTTCCAGTATaGGTTCGGCAAGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLLLPV*VRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCATGGGATCACGCCATTaGGCTCATGAGTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAMGSRH*AHEFQP
Trigger: AGGTTGAAACTCATGAGCCCAATGGCGTGATCCCAT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCATGGGATCACGCCATTaGGCTCATGAGTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPMGSRH*AHEFQP
Trigger: AGGTTGAAACTCATGAGCCCAATGGCGTGATCCCAT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGATGAAACCTTCTTaGCCTGTTCCTCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLMKPS*PVPLAH
Trigger: GTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGATGGAGTGAAATCTaGGCCACAGTTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARWSEI*ATVYAR
Trigger: CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGATGGAGTGAAATCTaGGCCACAGTTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPRWSEI*ATVYAR
Trigger: CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSAYSG*SVPCGT
Trigger: TGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTATIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPTIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCATCCCCACCTTTTTaGGACCCATGCTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTASPPF*DPCSCI
Trigger: TATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAGGCAAGTGTCCTCTaGCCAGGAGCTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTKASVL*PGASDS
Trigger: AGAATCTGAAGCTCCTGGCCAGAGGACACTTGCCTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGCTCATTTAGGTTaGCGTCTATCCAGTCGAACA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAAAHLG*RLSSRT
Trigger: TGTTCGACTGGATAGACGCCAACCTAAATGAGCAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLEWVC*VSLLLP
Trigger: TGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTCCATTTCTTCCTCCTaGGCAGGAGAAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPSISSS*AGEVSE
Trigger: TTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTGGCAAAAGATGGAGTaGAATCTGGGCCACAGTTTA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPWQKME*NLGHSL
Trigger: TAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGAGAAGTTGGGCTCTaGAATGGCTTTCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATREVGL*NGFLKD
Trigger: ATCTTTGAGAAAGCCATTTCAGAGCCCAACTTCTCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTATTTGGTTGAAATACTaGTCCATTCGAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATIWLKY*SIRGLA
Trigger: AGCCAAGCCTCGAATGGATCAGTATTTCAACCAAAT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAACAGACAGTTGTCATaGGGGCTCGAACTAATGTAT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATNRQLS*GLELMY
Trigger: ATACATTAGTTCGAGCCCTCATGACAACTGTCTGTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAATCCTTCTGGCTTCTaGATGCTGGCAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPNPSGF*MLAKMN
Trigger: GTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLEGSS*RSGVLL
Trigger: CAATAAAACACCACTTCGGCAACTGGATCCCTCCAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTAATATGTTCTCGGTaGTCTTCCATCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLICSR*SSISAS
Trigger: GGAGGCTGAGATGGAAGAGCACCGAGAACATATTAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGTCGTCCTCCAGGTaGAAAAAGCTGGTTGTTAGA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTQSSSR*KKLVVR
Trigger: TCTAACAACCAGCTTTTTGCACCTGGAGGACGACTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGTAGTCGCCCCATATaGTCACGAGCAATGGTACTA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSSRPI*SRAMVL
Trigger: TAGTACCATTGCTCGTGAGCATATGGGGCGACTACT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCTTTTTGGGACCCATaGTCTTGCATAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPFWDP*SCIRDP
Trigger: TGGGTCTCTTATGCAAGAGCATGGGTCCCAAAAAGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCACACAGGTATTTCTaGAGCAGTCTTGCTCGCACT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSHRYF*SSLART
Trigger: AGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTTGTAGCTCCTTCTaGTCATCACACAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPACSSF*SSHRYF
Trigger: GAAATACCTGTGTGATGAGCAGAAGGAGCTACAAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTCTTAGGAGCAATCTaGGGTGGCTGGTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLLGAI*GGWFIK
Trigger: TTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTATATCCTTCCCTCCTTaGTTTGGGTCTCGAATTCGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTISFPP*FGSRIR
Trigger: CCGAATTCGAGACCCAAACCAAGGAGGGAAGGATAT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTTCTACTTCCAGTATaGGTTCGGCAAGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLLLPV*VRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATRELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCATCCAGTTGCCGAAGTaGTGTTTTATTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPIQLPK*CFIGLV
Trigger: GACAAGGCCAATAAAACACCACTTCGGCAACTGGAT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGATGGAGTGAAATCTaGGCCACAGTTTATGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRWSEI*ATVYAR
Trigger: CCTGGCATAAACTGTGGCCCAGATTTCACTCCATCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAGATTGGCAAAAGATaGAGTGAAATCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATKIGKR*SEIWAT
Trigger: TGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
3UTR CAA 72 bp AAGAGACCCAGGATCTCCAGCAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGCTTCGTAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KRPRISSNKEVA*PMGLRGFVISL
Trigger: CAGGGAAATTACGAAGCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATTGCTGGAGATCCTGGGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
3UTR CAA 72 bp CCTTCTGCTCATCACACAGGTATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTTGAACATCCACTCGGA +
Preference number: 4 (lower is better)
Translates to: PSAHHTGISAAV*LALSTLEHPLG
Trigger: TCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGATGAGCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCCATTTCTTCCTCCTaGGCAGGAGAAGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTSISSS*AGEVSE
Trigger: TTCAGATACTTCTCCTGCTCAGGAGGAAGAAATGGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTTAGAGGCTTCCACTaGTCTGACTTGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFRGFH*SDLYSY
Trigger: GTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTGGCAAAAGATGGAGTaGAATCTGGGCCACAGTTTA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTWQKME*NLGHSL
Trigger: TAAACTGTGGCCCAGATTTCACTCCATCTTTTGCCA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTCAGTCATTATCACTaGGGAAATGATCTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFSHYH*GNDLAS
Trigger: ACTCGCAAGATCATTTCCTCAGTGATAATGACTGAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCATTTGGTTGAAATACTaGTCCATTCGAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAIWLKY*SIRGLA
Trigger: AGCCAAGCCTCGAATGGATCAGTATTTCAACCAAAT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTAGNVC*RAEKRF
Trigger: GAATCGCTTTTCTGCTCTTCAACAAACATTACCCGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAACAGACAGTTGTCATaGGGGCTCGAACTAATGTAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTANRQLS*GLELMY
Trigger: ATACATTAGTTCGAGCCCTCATGACAACTGTCTGTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAACAGACAGTTGTCATaGGGGCTCGAACTAATGTAT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPNRQLS*GLELMY
Trigger: ATACATTAGTTCGAGCCCTCATGACAACTGTCTGTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAATCCTTCTGGCTTCTaGATGCTGGCAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTNPSGF*MLAKMN
Trigger: GTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPPLAMS*CTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAGCCAATTGAAGAATaGTGTGACAGATTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATKPIEE*CDRFKG
Trigger: GCCCTTAAATCTGTCACAGCATTCTTCAATTGGCTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTARELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTATCCAGTTGCCGAAGTaGTGTTTTATTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTIQLPK*CFIGLV
Trigger: GACAAGGCCAATAAAACACCACTTCGGCAACTGGAT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTTAGAGGCTTCCACTaGTCTGACTTGTACTCATAC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTFRGFH*SDLYSY
Trigger: GTATGAGTACAAGTCAGATCAGTGGAAGCCTCTAAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTCAGTCATTATCACTaGGGAAATGATCTTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFSHYH*GNDLAS
Trigger: ACTCGCAAGATCATTTCCTCAGTGATAATGACTGAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGAGAAGTTGGGCTCTaGAATGGCTTTCTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTREVGL*NGFLKD
Trigger: ATCTTTGAGAAAGCCATTTCAGAGCCCAACTTCTCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTATTTGGTTGAAATACTaGTCCATTCGAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTIWLKY*SIRGLA
Trigger: AGCCAAGCCTCGAATGGATCAGTATTTCAACCAAAT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCTCCTTCATGTCATTaGGATGGAGATATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPPSCH*DGDIPQ
Trigger: TTGAGGAATATCTCCATCTCAATGACATGAAGGAGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAACAGACAGTTGTCATaGGGGCTCGAACTAATGTAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTNRQLS*GLELMY
Trigger: ATACATTAGTTCGAGCCCTCATGACAACTGTCTGTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPLAMS*CTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAAGCCAATTGAAGAATaGTGTGACAGATTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAKPIEE*CDRFKG
Trigger: GCCCTTAAATCTGTCACAGCATTCTTCAATTGGCTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTRELRF*NGFAEC
Trigger: ACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAPGAKS*LLESME
Trigger: TTCCATTGATTCTAACAACCAGCTTTTTGCACCTGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAA +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPPGAKS*LLESME
Trigger: TTCCATTGATTCTAACAACCAGCTTTTTGCACCTGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SCLISHFISSRHIALQAPLELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTALELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAAAACGGATGCGAGATaGGGTCTTCTTTTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAKTDAR*GLLFFN
Trigger: ATTAAAGAAAAGAAGACCTCATCTCGCATCCGTTTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR GCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAGCCAATTGAAGAATaGTGTGACAGATTTAAGGGC +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTKPIEE*CDRFKG
Trigger: GCCCTTAAATCTGTCACAGCATTCTTCAATTGGCTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCTCGCACTTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATACCATCATCTACAAGTaGAAGGCCACGGTTGATAGG +
Preference number: 4 (lower is better)
Translates to: CSHFQHLNIHSERSLKDNTIIYK*KATVDR
Trigger: CCTATCAACCGTGGCCTTCCACTTGTAGATGATGGT...ATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231598.2
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAA +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTPGAKS*LLESME
Trigger: TTCCATTGATTCTAACAACCAGCTTTTTGCACCTGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTCATGTCATTGAGATaGAGATATTCCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: FISSRHIALQAPTATAATFMSLR*RYSSMM
Trigger: CATCATTGAGGAATATCTCCATCTCAATGACATGAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTCGAACTAATGTATTaGATGCTATCTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTLELMY*MLSAAH
Trigger: ATGAGCAGCAGATAGCATCCAATACATTAGTTCGAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR TCA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAAACGGATGCGAGATaGGGTCTTCTTTTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: CLISHFISSRHIALQAPTKTDAR*GLLFFN
Trigger: ATTAAAGAAAAGAAGACCTCATCTCGCATCCGTTTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CCA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTCATGTCATTGAGATaGAGATATTCCTCAATGATG +
Preference number: 4 (lower is better)
Translates to: LISHFISSRHIALQAPTAFMSLR*RYSSMM
Trigger: CATCATTGAGGAATATCTCCATCTCAATGACATGAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
3UTR CAA 72 bp GTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACTaGAACATCCACTCGGAGAGGAGTCTCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: VFLQQSCSHFQH*NIHSERSLKDN
Trigger: ATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000156226.8
ENSMUST00000231598.2
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCTCGGGGGCCCACGGTaGCTGAGGGCTGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPLGGPR*LRAGRP
Trigger: TGGCCGACCAGCCCTCAGCAACCGTGGGCCCCCGAG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTCGGGGGCCCACGGTaGCTGAGGGCTGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLGGPR*LRAGRP
Trigger: TGGCCGACCAGCCCTCAGCAACCGTGGGCCCCCGAG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCTCAGGCTGGGCAGTaGGAGCAATGGGCACGAGCG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPQAGQ*EQWARA
Trigger: CGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPGEGAP*SSSSGW
Trigger: CCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCCCCACTGCTGCCCTaGCCCCAACTCAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPPLLP*PQLSRP
Trigger: AGGACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPVRLAA*RSPSGW
Trigger: CCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCAC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTCAGGCTGGGCAGTaGGAGCAATGGGCACGAGCG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPQAGQ*EQWARA
Trigger: CGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSGEGAP*SSSSGW
Trigger: CCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCACTGCTGCCCTaGCCCCAACTCAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPPLLP*PQLSRP
Trigger: AGGACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAVSEG*APEPPL
Trigger: CAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAVSEG*APEPPL
Trigger: CAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVVRLAA*RSPSGW
Trigger: CCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCAC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSVRLAA*RSPSGW
Trigger: CCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCAC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp ATCACTGAGGAAATGATCTTGCGAGTTTCCTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGGCCAGCCTGCGGCCCTCGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ITEEMILRVSFRGPC*ERLGPRPACGPRGS
Trigger: GCTGCCCCGAGGGCCGCAGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGCAAGATCATTTCCTCAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115461.8
ENSMUST00000142344.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGAGCTGGCTCTGTGCTaGACTCCACCTCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPELALC*TPPLVP
Trigger: TGGAACCAGAGGTGGAGTCAAGCACAGAGCCAGCTC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRLSLP*AMSCCT
Trigger: AGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAGACAGCGCAGCCTTaGGAGGGCTCACTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVQTAQP*EGSLEV
Trigger: TACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGTCTG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGACAGCGCAGCCTTaGGAGGGCTCACTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSQTAQP*EGSLEV
Trigger: TACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGTCTG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPKLLHT*GWVIGS
Trigger: GGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGAGCTGGCTCTGTGCTaGACTCCACCTCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVELALC*TPPLVP
Trigger: TGGAACCAGAGGTGGAGTCAAGCACAGAGCCAGCTC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTGGGTCCACCTCCTaGAAGGCATCTAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAGSTS*KASRRS
Trigger: AGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCCAGGCTTTGTGATCTaGGTGAGCCGTGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPPGFVI*VSREVS
Trigger: TGACACCTCACGGCTCACCAAGATCACAAAGCCTGG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTAAGGGCCACACCCTaGCCCTGCTGTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLRATP*PCCSAG
Trigger: TCCTGCTGAACAGCAGGGCAAGGGTGTGGCCCTTAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS GCA 90 bp TTCCCGCTTCACAGGATCCCGACCACGATCCTCTGTGAGGCTAGCTaGCTTGCGGAGTCCCTCAGGCTGGGATGGCCGCTCTCTACTTCG +
Preference number: 5 (lower is better)
Translates to: FPLHRIPTTILCEAS*LAESLRLGWPLSTS
Trigger: CGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAGGATCGTGGTCGGGATCCTGTGAAGCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSKLLHT*GWVIGS
Trigger: GGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTGGGTCCACCTCCTaGAAGGCATCTAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAGSTS*KASRRS
Trigger: AGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTGGGTCCACCTCCTaGAAGGCATCTAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAGSTS*KASRRS
Trigger: AGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCTCGGGGGCCCACGGTaGCTGAGGGCTGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATLGGPR*LRAGRP
Trigger: TGGCCGACCAGCCCTCAGCAACCGTGGGCCCCCGAG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAACAGGTCCTGGGTCTaGCTTCCATCAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPNRSWV*LPSASS
Trigger: AGAGGATGCTGATGGAAGCAAGACCCAGGACCTGTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCAAAGTCCAGGTCTTaGCCTATAGTGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAKSRS*PIVVRR
Trigger: CCTCCTCACCACTATAGGCAAAGACCTGGACTTTGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCAGGCTTTGTGATCTaGGTGAGCCGTGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSPGFVI*VSREVS
Trigger: TGACACCTCACGGCTCACCAAGATCACAAAGCCTGG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCAGGCTTTGTGATCTaGGTGAGCCGTGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVPGFVI*VSREVS
Trigger: TGACACCTCACGGCTCACCAAGATCACAAAGCCTGG...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAACATCCGAAGCAGGTaGGCAGGCTGTTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPNIRSR*AGCSKV
Trigger: GACCTTAGAACAGCCTGCCAACCTGCTTCGGATGTT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS GCA 90 bp GCTGTGTGGGCACCATGCTGCCCTCAGACTCTGGGCTTGGGTTGCTaGCAGTGGGAGGCTGATTCTCTACCTCTGGTACTGCTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: AVWAPCCPQTLGLGC*QWEADSLPLVLLGP
Trigger: TGGACCCAGCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS GCA 90 bp CAGGCTGTGTGGGCACCATGCTGCCCTCAGACTCTGGGCTTGGGTTaGTGCCAGTGGGAGGCTGATTCTCTACCTCTGGTACTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: QAVWAPCCPQTLGLG*CQWEADSLPLVLLG
Trigger: ACCCAGCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp TGGGCACCATGCTGCCCTCAGACTCTGGGCTTGGGTTGCTGCCAGTaGGAGGCTGATTCTCTACCTCTGGTACTGCTGGGTCCACCTCCT +
Preference number: 5 (lower is better)
Translates to: WAPCCPQTLGLGCCQ*EADSLPLVLLGPPP
Trigger: AGGAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCAGGGATCATCATTACTaGGGATCCAGCAGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPRDHHY*GSSRVD
Trigger: GTCTACCCTGCTGGATCCCAAGTAATGATGATCCCT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCCAGGGTACTGCTGTGTaGGGACAACATATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPQGTAV*GQHMWN
Trigger: GTTCCACATATGTTGTCCCAACACAGCAGTACCCTG...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTTTCCGTCTCCTCTTaGGCACAGACACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFSVSS*AQTLPP
Trigger: AGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAACAGGTCCTGGGTCTaGCTTCCATCAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSNRSWV*LPSASS
Trigger: AGAGGATGCTGATGGAAGCAAGACCCAGGACCTGTT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCAAAGTCCAGGTCTTaGCCTATAGTGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAKSRS*PIVVRR
Trigger: CCTCCTCACCACTATAGGCAAAGACCTGGACTTTGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCAAAGTCCAGGTCTTaGCCTATAGTGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSAKSRS*PIVVRR
Trigger: CCTCCTCACCACTATAGGCAAAGACCTGGACTTTGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTTCGAGGCTTGGCTTTaGCAAAGTCCAGGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPFEAWL*QSPGLC
Trigger: GCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTGGGACCCATGCTCTaGCATAAGAGACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSLGPML*HKRPRI
Trigger: GATCCTGGGTCTCTTATGCAAGAGCATGGGTCCCAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTGGGACCCATGCTCTaGCATAAGAGACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVLGPML*HKRPRI
Trigger: GATCCTGGGTCTCTTATGCAAGAGCATGGGTCCCAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGCATCCCCACCTTTTaGGGACCCATGCTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSIPTF*GPMLLH
Trigger: ATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGCT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAGCATCCCCACCTTTTaGGGACCCATGCTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSIPTF*GPMLLH
Trigger: ATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGCT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCTCGCACTTTCAACACTaGAACATCCACTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPSHFQH*NIHSER
Trigger: CCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp TCCACAGCTGGTGGTGAGGGGGCTCCGTTGAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGCACGAGCGATTCAGAAGCACAAGGT +
Preference number: 5 (lower is better)
Translates to: STAGGEGAPLSSSSG*AVGAMGTSDSEAQG
Trigger: ACCTTGTGCTTCTGAATCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACCAGCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp TTCCTCAGGCTGTGTGGGCACCATGCTGCCCTCAGACTCTGGGCTTaGGTTGCTGCCAGTGGGAGGCTGATTCTCTACCTCTGGTACTGC +
Preference number: 5 (lower is better)
Translates to: FLRLCGHHAALRLWA*VAASGRLILYLWYC
Trigger: GCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCAGGGTACTGCTGTGTaGGGACAACATATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSQGTAV*GQHMWN
Trigger: GTTCCACATATGTTGTCCCAACACAGCAGTACCCTG...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVDILPS*VWVSNS
Trigger: CGAATTCGAGACCCAAACCAAGGAGGGAAGGATATC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSDILPS*VWVSNS
Trigger: CGAATTCGAGACCCAAACCAAGGAGGGAAGGATATC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCTCGGGGGCCCACGGTaGCTGAGGGCTGGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTLGGPR*LRAGRP
Trigger: TGGCCGACCAGCCCTCAGCAACCGTGGGCCCCCGAG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTTCGAGGCTTGGCTTTaGCAAAGTCCAGGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVFEAWL*QSPGLC
Trigger: GCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTTCGAGGCTTGGCTTTaGCAAAGTCCAGGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSFEAWL*QSPGLC
Trigger: GCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCGCACTTTCAACACTaGAACATCCACTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSHFQH*NIHSER
Trigger: CCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp ATGCTGCCCTCAGACTCTGGGCTTGGGTTGCTGCCAGTGGGAGGCTaGTTCTCTACCTCTGGTACTGCTGGGTCCACCTCCTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MLPSDSGLGLLPVGG*FSTSGTAGSTSLKA
Trigger: TGCCTTCAAGGAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS GCA 90 bp AGTCCCAGGTTTCTTCTGTTTCCTCAGGCTGTGTGGGCACCATGCTaGCCTCAGACTCTGGGCTTGGGTTGCTGCCAGTGGGAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: SPRFLLFPQAVWAPC*PQTLGLGCCQWEAD
Trigger: ATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAACAGAAGAAACCTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp TGGGGCAGGAGCCACACTAGCAGGAAACTGCTGCACACCTTGGGCTaGGTAATAGGCTCCAGCATAGGTCCCAAACTCGGTAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: WGRSHTSRKLLHTLG*VIGSSIGPKLGRAC
Trigger: GCAAGCCCTACCGAGTTTGGGACCTATGCTGGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CCA 90 bp TTCTGTTTCCTCAGGCTGTGTGGGCACCATGCTGCCCTCAGACTCTaGGCTTGGGTTGCTGCCAGTGGGAGGCTGATTCTCTACCTCTGG +
Preference number: 5 (lower is better)
Translates to: FCFLRLCGHHAALRL*AWVAASGRLILYLW
Trigger: CCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAACAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp CCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTGTCCAGGGATATAGTAGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PKLGRACTWIEAWGS*LHRVLLSRDIVGSL
Trigger: CAAGGAGCCTACTATATCCCTGGACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPDSGMG*LSVTST
Trigger: AGTAGAAGTGACACTCAGCAAACCCATTCCAGAATC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATGEGAP*SSSSGW
Trigger: CCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCTCTGGAGGGATCCAGTaGCCGAAGTGGTGTTTTATT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVSGGIQ*PKWCFI
Trigger: AATAAAACACCACTTCGGCAACTGGATCCCTCCAGA...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTTCTGGAGGGATCCAGTaGCCGAAGTGGTGTTTTATT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSSGGIQ*PKWCFI
Trigger: AATAAAACACCACTTCGGCAACTGGATCCCTCCAGA...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCCCCACTGCTGCCCTaGCCCCAACTCAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATPPLLP*PQLSRP
Trigger: AGGACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCGCCTCCTTCATGTCATaGAGATGGAGATATTCCTCA +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPASFMS*RWRYSS
Trigger: TGAGGAATATCTCCATCTCAATGACATGAAGGAGGC...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSNKEVA*PMGLRG
Trigger: GCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATT...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp AGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCCCCATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: SPGGWLAGPSTCPWLQVPISAAV*LALSTL
Trigger: AAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAAT...GGGGACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCCTCACGAAGCCAATaGAAGAATGCTGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSASRSQ*KNAVTD
Trigger: ATCTGTCACAGCATTCTTCAATTGGCTTCGTGAGGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS GCA 90 bp CCTGGAGGGCCACCCCGACGTTTGTCGCTGCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCTCGGTGCTCTTCCATCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: PGGPPRRLSLPLAMS*CTLICSRCSSISAS
Trigger: GGAGGCTGAGATGGAAGAGCACCGAGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp CCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTGTGTTGGGACAACATATGTGGAACG +
Preference number: 5 (lower is better)
Translates to: PKLGRACTWIEAWGS*LHRVLLCWDNICGT
Trigger: CGTTCCACATATGTTGTCCCAACACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS CCA 90 bp CCGTTCCCTCTTAGGAGCAATCTGGGGTGGCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGCAGGAAACTGCTGCACACCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PFPLRSNLGWLVHQN*GRSHTSRKLLHTLG
Trigger: GCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCTAAGAGGGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CCA 90 bp CCACGATCCTCTGTGAGGCTAGCTGCCTTGCGGAGTCCCTCAGGCTaGGATGGCCGCTCTCTACTTCGCTCCTCCACTTCTTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PRSSVRLAALRSPSG*DGRSLLRSSTSLLK
Trigger: TTTTAGCAAAGAAGTGGAGGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAGGATCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCGACTCCCCATTGGGTaGAGGCTCCAGACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATRLPIG*RLQTAS
Trigger: GGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSDSGMG*LSVTST
Trigger: AGTAGAAGTGACACTCAGCAAACCCATTCCAGAATC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVDSGMG*LSVTST
Trigger: AGTAGAAGTGACACTCAGCAAACCCATTCCAGAATC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCTCAGGCTGGGCAGTaGGAGCAATGGGCACGAGCG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPPQAGQ*EQWARA
Trigger: CGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCTCAGGCTGGGCAGTaGGAGCAATGGGCACGAGCG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAPQAGQ*EQWARA
Trigger: CGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPGEGAP*SSSSGW
Trigger: CCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCCCCACTGCTGCCCTaGCCCCAACTCAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPPPLLP*PQLSRP
Trigger: AGGACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPAVSEG*APEPPL
Trigger: CAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAAVSEG*APEPPL
Trigger: CAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPVRLAA*RSPSGW
Trigger: CCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCAC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAVRLAA*RSPSGW
Trigger: CCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCAC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCGCCTCCTTCATGTCATaGAGATGGAGATATTCCTCA +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVASFMS*RWRYSS
Trigger: TGAGGAATATCTCCATCTCAATGACATGAAGGAGGC...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTGCTCGAACTAATGTATaGGATGCTATCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LQSRRLAGWAIHVSMAPSARTNV*DAICCS
Trigger: TGAGCAGCAGATAGCATCCAATACATTAGTTCGAGC...ACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCAGTCCAGGCGGCTGGCTGGCTGGGCCATCCACGTGTCCATGGCTCCAAGTCATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: CSPGGWLAGPSTCPWLQVISAAV*LALSTL
Trigger: AAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAAT...GACTTGGAGCCATGGACACGTGGATGGCCCAGCCAGCCAGCCGCCTGGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp AGCATAGGTCCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGGGTACTGCTGTGTTGGGACAACATA +
Preference number: 5 (lower is better)
Translates to: SIGPKLGRACTWIEA*GSWLHRVLLCWDNI
Trigger: TATGTTGTCCCAACACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGGACCTATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS CCA 90 bp ATCCTCTGTGAGGCTAGCTGCCTTGCGGAGTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTCCTCCACTTCTTTGCTAAAACTTCG +
Preference number: 5 (lower is better)
Translates to: ILCEASCLAESLRLG*PLSTSLLHFFAKTS
Trigger: CGAAGTTTTAGCAAAGAAGTGGAGGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp AGCATAGGTCCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGGGTACTGCTGTCCAGGGATATAGTA +
Preference number: 5 (lower is better)
Translates to: SIGPKLGRACTWIEA*GSWLHRVLLSRDIV
Trigger: TACTATATCCCTGGACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGGACCTATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCGACTCCCCATTGGGTaGAGGCTCCAGACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPRLPIG*RLQTAS
Trigger: GGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCTCAGGCTGGGCAGTaGGAGCAATGGGCACGAGCG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTPQAGQ*EQWARA
Trigger: CGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTGEGAP*SSSSGW
Trigger: CCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTAVSEG*APEPPL
Trigger: CAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCGACTCCCCATTGGGTaGAGGCTCCAGACTGCCTCC +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTRLPIG*RLQTAS
Trigger: GGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGAGCTGGCTCTGTGCTaGACTCCACCTCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATELALC*TPPLVP
Trigger: TGGAACCAGAGGTGGAGTCAAGCACAGAGCCAGCTC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTPQTLG*GCCQWE
Trigger: CTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATRLSLP*AMSCCT
Trigger: AGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp GGGCTCGAACTAATGTATTGGATGCTATCTGCTGCTCATTTAGGTTGGCGTCTAGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: GLELMYWMLSAAHLGWRLGPPRR*SLPLAM
Trigger: CATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCC...TAGACGCCAACCTAAATGAGCAGCAGATAGCATCCAATACATTAGTTCGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231598.2
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCAGACAGCGCAGCCTTaGGAGGGCTCACTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPQTAQP*EGSLEV
Trigger: TACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGTCTG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCAGACAGCGCAGCCTTaGGAGGGCTCACTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAQTAQP*EGSLEV
Trigger: TACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGTCTG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp TGTGGAACGCCCCTGTCCAGGGATATAGTAGGCTCCTTGGGAGGCTaGGTAGGAGATCTGGGAAGGGATCATCATTACTTGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: CGTPLSRDIVGSLGG*VGDLGRDHHYLGSS
Trigger: GCTGGATCCCAAGTAATGATGATCCCTTCCCAGATCTCCTACTCAGCCTCCCAAGGAGCCTACTATATCCCTGGACAGGGGCGTTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000142344.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS CCA 90 bp CGCCATTGGGCTCATGAGTTTCAACCTTGTGAGGCACCAGGGCCGTaGAAACCTGGAGAGGACTGGAAGAGAACTCAGATTCTGGAATGG +
Preference number: 5 (lower is better)
Translates to: RHWAHEFQPCEAPGP*KPGEDWKRTQILEW
Trigger: CCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCTGGTGCCTCACAAGGTTGAAACTCATGAGCCCAATGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp TTGACTCCACCTCTGGTTCCAGATCCTCAGATGGGATCACGCCATTaGGCTCATGAGTTTCAACCTTGTGAGGCACCAGGGCCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LTPPLVPDPQMGSRH*AHEFQPCEAPGPWK
Trigger: TTTCCACGGCCCTGGTGCCTCACAAGGTTGAAACTCATGAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAACCAGAGGTGGAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp GCTTCATCAGCTGCTGAAACATCTGGGGTGTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACAGGTCCTGGGTCTTGCTTCCATCAG +
Preference number: 5 (lower is better)
Translates to: ASSAAETSGVSAYSG*SVPCGTGPGSCFHQ
Trigger: CTGATGGAAGCAAGACCCAGGACCTGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGACACCCCAGATGTTTCAGCAGCTGATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATKLLHT*GWVIGS
Trigger: GGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGAGCTGGCTCTGTGCTaGACTCCACCTCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAELALC*TPPLVP
Trigger: TGGAACCAGAGGTGGAGTCAAGCACAGAGCCAGCTC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCTGGGTCCACCTCCTaGAAGGCATCTAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATAGSTS*KASRRS
Trigger: AGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPRLSLP*AMSCCT
Trigger: AGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCCAGGCTTTGTGATCTaGGTGAGCCGTGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATPGFVI*VSREVS
Trigger: TGACACCTCACGGCTCACCAAGATCACAAAGCCTGG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGACAGCGCAGCCTTaGGAGGGCTCACTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTQTAQP*EGSLEV
Trigger: TACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGTCTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTAAGGGCCACACCCTaGCCCTGCTGTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTALRATP*PCCSAG
Trigger: TCCTGCTGAACAGCAGGGCAAGGGTGTGGCCCTTAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp CACAGGGTACTGCTGTCCAGGGATATAGTAGGCTCCTTGGGAGGCTaGGTAGGAGATCTGGGAAGGGATCATCATTACTTGGGATCCAGC +
Preference number: 5 (lower is better)
Translates to: HRVLLSRDIVGSLGG*VGDLGRDHHYLGSS
Trigger: GCTGGATCCCAAGTAATGATGATCCCTTCCCAGATCTCCTACTCAGCCTCCCAAGGAGCCTACTATATCCCTGGACAGCAGTACCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGAGCTGGCTCTGTGCTaGACTCCACCTCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTELALC*TPPLVP
Trigger: TGGAACCAGAGGTGGAGTCAAGCACAGAGCCAGCTC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTTTCCGTCTCCTCTTaGGCACAGACACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATFSVSS*AQTLPP
Trigger: AGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGGGTCCACCTCCTaGAAGGCATCTAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPAGSTS*KASRRS
Trigger: AGACCTTCTAGATGCCTTCAAGGAGGTGGACCCAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAACAGGTCCTGGGTCTaGCTTCCATCAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATNRSWV*LPSASS
Trigger: AGAGGATGCTGATGGAAGCAAGACCCAGGACCTGTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTRLSLP*AMSCCT
Trigger: AGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCCCAGGCTTTGTGATCTaGGTGAGCCGTGAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAPGFVI*VSREVS
Trigger: TGACACCTCACGGCTCACCAAGATCACAAAGCCTGG...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAGCATCCCCACCTTTTaGGGACCCATGCTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATSIPTF*GPMLLH
Trigger: ATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGCT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTAACATCCGAAGCAGGTaGGCAGGCTGTTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATNIRSR*AGCSKV
Trigger: GACCTTAGAACAGCCTGCCAACCTGCTTCGGATGTT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTAAGGGCCACACCCTaGCCCTGCTGTTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTLRATP*PCCSAG
Trigger: TCCTGCTGAACAGCAGGGCAAGGGTGTGGCCCTTAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp GAGTGTCACTTCTACTTCCAGTATGGGTTCGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTCCCCAGTTTCACAAGAGATAGGGGT +
Preference number: 5 (lower is better)
Translates to: ECHFYFQYGFGKSGF*REAIRLPSFTRDRG
Trigger: ACCCCTATCTCTTGTGAAACTGGGGAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCCGAACCCATACTGGAAGTAGAAGTGACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp CTGCTGCCCTTGCCCCAACTCAGTCGTCCTCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAACCAGGCTTTGTGATCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLPLPQLSRPPGAKS*LLESMEPGFVILVS
Trigger: GCTCACCAAGATCACAAAGCCTGGTTCCATTGATTCTAACAACCAGCTTTTTGCACCTGGAGGACGACTGAGTTGGGGCAAGGGCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGTTCATTTGTGTCGCTaGAGGCGTGCTAAACACCAC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATVHLCR*RRAKHH
Trigger: GTGGTGTTTAGCACGCCTCAAGCGACACAAATGAAC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPRRRVH*CRLRRA
Trigger: AGCACGCCTCAAGCGACACAAATGAACACGCCTTCT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTARRRVH*CRLRRA
Trigger: AGCACGCCTCAAGCGACACAAATGAACACGCCTTCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTCAGGGTACTGCTGTGTaGGGACAACATATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATQGTAV*GQHMWN
Trigger: GTTCCACATATGTTGTCCCAACACAGCAGTACCCTG...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTKLLHT*GWVIGS
Trigger: GGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATDILPS*VWVSNS
Trigger: CGAATTCGAGACCCAAACCAAGGAGGGAAGGATATC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGATGAAACCTTCTaGGCCTGTTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAADETF*ACSSGS
Trigger: TGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGATGAAACCTTCTaGGCCTGTTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPADETF*ACSSGS
Trigger: TGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTTTCCGTCTCCTCTTaGGCACAGACACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAFSVSS*AQTLPP
Trigger: AGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTTTCCGTCTCCTCTTaGGCACAGACACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPFSVSS*AQTLPP
Trigger: AGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAACAGGTCCTGGGTCTaGCTTCCATCAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPNRSWV*LPSASS
Trigger: AGAGGATGCTGATGGAAGCAAGACCCAGGACCTGTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAACAGGTCCTGGGTCTaGCTTCCATCAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTANRSWV*LPSASS
Trigger: AGAGGATGCTGATGGAAGCAAGACCCAGGACCTGTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCAAAGTCCAGGTCTTaGCCTATAGTGGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPAKSRS*PIVVRR
Trigger: CCTCCTCACCACTATAGGCAAAGACCTGGACTTTGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTTCGAGGCTTGGCTTTaGCAAAGTCCAGGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATFEAWL*QSPGLC
Trigger: GCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCTTGGGACCCATGCTCTaGCATAAGAGACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPLGPML*HKRPRI
Trigger: GATCCTGGGTCTCTTATGCAAGAGCATGGGTCCCAA...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGCATCCCCACCTTTTaGGGACCCATGCTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTASIPTF*GPMLLH
Trigger: ATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCGCACTTTCAACACTaGAACATCCACTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATSHFQH*NIHSER
Trigger: CCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAACATCCGAAGCAGGTaGGCAGGCTGTTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPNIRSR*AGCSKV
Trigger: GACCTTAGAACAGCCTGCCAACCTGCTTCGGATGTT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAACATCCGAAGCAGGTaGGCAGGCTGTTCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTANIRSR*AGCSKV
Trigger: GACCTTAGAACAGCCTGCCAACCTGCTTCGGATGTT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 90 bp GTGCGGGCCCCAGACATGATCTCTTCTGTGATATCCTTCCCTCCTTaGTTTGGGTCTCGAATTCGGATAGTTTTCCGTTCCCTCTTAGGA +
Preference number: 5 (lower is better)
Translates to: VRAPDMISSVISFPP*FGSRIRIVFRSLLG
Trigger: TCCTAAGAGGGAACGGAAAACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAGGATATCACAGAAGAGATCATGTCTGGGGCCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154594.8
CDS CCA 90 bp CAGGGCCGTGGAAACCTGGAGAGGACTGGAAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGTCACTTCTACTTCCAGTATGGGTTC +
Preference number: 5 (lower is better)
Translates to: QGRGNLERTGRELRF*NGFAECHFYFQYGF
Trigger: GAACCCATACTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGGTTTCCACGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp ATTGGCCTTGTCCAGCACCACATCAGTGATATGGGGCAATCCTTCTaGCTTCTGCATGCTGGCAAAGATGAACTGAAAGCCCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: IGLVQHHISDMGQSF*LLHAGKDELKAQQE
Trigger: TTCCTGCTGGGCTTTCAGTTCATCTTTGCCAGCATGCAGAAGCCAGAAGGATTGCCCCATATCACTGATGTGGTGCTGGACAAGGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 90 bp CTTGTGAATTTGATCAATAGTCTTAGGACCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCGCAGATCGAGTACATCCTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LVNLINSLRTLIPSA*HPITLPQIEYILQH
Trigger: ATGCTGCAGGATGTACTCGATCTGCGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTATTGATCAAATTCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGTTCATTTGTGTCGCTaGAGGCGTGCTAAACACCAC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPVHLCR*RRAKHH
Trigger: GTGGTGTTTAGCACGCCTCAAGCGACACAAATGAAC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000156226.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAGGGATCATCATTACTaGGGATCCAGCAGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTARDHHY*GSSRVD
Trigger: GTCTACCCTGCTGGATCCCAAGTAATGATGATCCCT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCCAGGGTACTGCTGTGTaGGGACAACATATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPQGTAV*GQHMWN
Trigger: GTTCCACATATGTTGTCCCAACACAGCAGTACCCTG...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPDILPS*VWVSNS
Trigger: CGAATTCGAGACCCAAACCAAGGAGGGAAGGATATC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTADILPS*VWVSNS
Trigger: CGAATTCGAGACCCAAACCAAGGAGGGAAGGATATC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCTGATGAAACCTTCTaGGCCTGTTCCTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTADETF*ACSSGS
Trigger: TGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTTTCCGTCTCCTCTTaGGCACAGACACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTFSVSS*AQTLPP
Trigger: AGGTGGCAGTGTCTGTGCCAAAGAGGAGACGGAAAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTTCTGGAGGGATCCAGTaGCCGAAGTGGTGTTTTATT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATSGGIQ*PKWCFI
Trigger: AATAAAACACCACTTCGGCAACTGGATCCCTCCAGA...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTTCGAGGCTTGGCTTTaGCAAAGTCCAGGTCTTTGC +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAFEAWL*QSPGLC
Trigger: GCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTTGGGACCCATGCTCTaGCATAAGAGACCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTLGPML*HKRPRI
Trigger: GATCCTGGGTCTCTTATGCAAGAGCATGGGTCCCAA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAGCATCCCCACCTTTTaGGGACCCATGCTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTSIPTF*GPMLLH
Trigger: ATGCAAGAGCATGGGTCCCAAAAAGGTGGGGATGCT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCGCACTTTCAACACTaGAACATCCACTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTASHFQH*NIHSER
Trigger: CCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp CCTGGAGAGGACTGGAAGAGAACTCAGATTCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCAGTATGGGTTCGGCAAGAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: PGEDWKRTQILEWVC*VSLLLPVWVRQEWV
Trigger: AACCCACTCTTGCCGAACCCATACTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTCAGGGTACTGCTGTGTaGGGACAACATATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTQGTAV*GQHMWN
Trigger: GTTCCACATATGTTGTCCCAACACAGCAGTACCCTG...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCTGGAGGGATCCAGTaGCCGAAGTGGTGTTTTATT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTASGGIQ*PKWCFI
Trigger: AATAAAACACCACTTCGGCAACTGGATCCCTCCAGA...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTAGRPR*AKDGVK
Trigger: TTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp ATCACACAGGTATTTCTGCAGCAGTCTTGCTCGCACTTTCAACACTTGAACATCCGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACT +
Preference number: 5 (lower is better)
Translates to: ITQVFLQQSCSHFQHLNIRLSLP*AMSCCT
Trigger: AGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACG...GATGTTCAAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAATACCTGTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231598.2
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPNKEVA*PMGLRG
Trigger: GCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTANKEVA*PMGLRG
Trigger: GCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTGCTCGAACTAATGTATaGGATGCTATCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATARTNV*DAICCS
Trigger: TGAGCAGCAGATAGCATCCAATACATTAGTTCGAGC...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCGCACTTTCAACACTaGAACATCCACTCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTSHFQH*NIHSER
Trigger: CCTCTCCGAGTGGATGTTCAAGTGTTGAAAGTGCGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCACTGCCGCCACTATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: FISSRHIALQAPTATAATISAAV*LALSTL
Trigger: AAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAAT...AGTGGCGGCAGTGGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCCTCACGAAGCCAATaGAAGAATGCTGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPASRSQ*KNAVTD
Trigger: ATCTGTCACAGCATTCTTCAATTGGCTTCGTGAGGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp GTTGTTAGAATCAATGGAACCAGGCTTTGTGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACTGCCTTTGCTAATGGGGACTGTATT +
Preference number: 5 (lower is better)
Translates to: VVRINGTRLCDLGEP*GVNGATAFANGDCI
Trigger: AATACAGTCCCCATTAGCAAAGGCAGTCGCCCCATTGACACCTCACGGCTCACCAAGATCACAAAGCCTGGTTCCATTGATTCTAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTADSGMG*LSVTST
Trigger: AGTAGAAGTGACACTCAGCAAACCCATTCCAGAATC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTTCTGGAGGGATCCAGTaGCCGAAGTGGTGTTTTATT +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTSGGIQ*PKWCFI
Trigger: AATAAAACACCACTTCGGCAACTGGATCCCTCCAGA...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCCTCCTTCATGTCATaGAGATGGAGATATTCCTCA +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPASFMS*RWRYSS
Trigger: TGAGGAATATCTCCATCTCAATGACATGAAGGAGGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTAATAAAGAAGTAGCTTaGCCCATGGGTCTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTNKEVA*PMGLRG
Trigger: GCCTCTGAGACCCATGGGCAAAGCTACTTCTTTATT...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCGCTCGAACTAATGTATaGGATGCTATCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPARTNV*DAICCS
Trigger: TGAGCAGCAGATAGCATCCAATACATTAGTTCGAGC...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCGCTCGAACTAATGTATaGGATGCTATCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAARTNV*DAICCS
Trigger: TGAGCAGCAGATAGCATCCAATACATTAGTTCGAGC...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TCCTGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: SCLISHFISSRHIALQAPISAAV*LALSTL
Trigger: AAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAAT...GGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp CTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCATTTCTGCAGCAGTCTaGCTCGCACTTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: LISHFISSRHIALQAPTAISAAV*LALSTL
Trigger: AAGTGTTGAAAGTGCGAGCAAGACTGCTGCAGAAAT...GGCAGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCACGAAGCCAATaGAAGAATGCTGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTASRSQ*KNAVTD
Trigger: ATCTGTCACAGCATTCTTCAATTGGCTTCGTGAGGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCCTCCTTCATGTCATaGAGATGGAGATATTCCTCA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTASFMS*RWRYSS
Trigger: TGAGGAATATCTCCATCTCAATGACATGAAGGAGGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TGCCTCATCAGCCACTTTATTAGCTCAAGACACATCGCACTACAGGCACCCACTGCTCGAACTAATGTATaGGATGCTATCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CLISHFISSRHIALQAPTARTNV*DAICCS
Trigger: TGAGCAGCAGATAGCATCCAATACATTAGTTCGAGC...AGTGGGTGCCTGTAGTGCGATGTGTCTTGAGCTAATAAAGTGGCTGATGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 90 bp CTGCTTTATTTAGTTTTATGTCTTCAGTCATTATCACTGAGGAAATaGTCTTGCGAGTTTCCTTTCGTGGGCCCTGCTGAGAGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLYLVLCLQSLSLRK*SCEFPFVGPAESAW
Trigger: CCAGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGCAAGATCATTTCCTCAGTGATAATGACTGAAGACATAAAACTAAATAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS TCA 90 bp TGTACAACACGTCTGTTATCTGTGTTCTCTGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTCAAGGTAGCTGGACGAGTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CTTRLLSVFSAGNVC*RAEKRFKVAGRVAS
Trigger: GGAAGCTACTCGTCCAGCTACCTTGAATCGCTTTTCTGCTCTTCAACAAACATTACCCGCAGAGAACACAGATAACAGACGTGTTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS-3UTR CAA 90 bp TTTCAACACTTGAACATCCACTCGGAGAGGAGTCTCAAAGATAATTGCAGAATAGTTCATTTGTGTCGCTaGAGGCGTGCTAAACACCAC +
Preference number: 5 (lower is better)
Translates to: FQHLNIHSERSLKDNCRIVHLCR*RRAKHH
Trigger: GTGGTGTTTAGCACGCCTCAAGCGACACAAATGAAC...TATTCTGCAATTATCTTTGAGACTCCTCTCCGAGTGGATGTTCAAGTGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156226.8
CDS GCA 72 bp AGGACGGGCAGGGGCTGCACTCTGCACTCGGGAGGCTaGACTGCTAGGGGGCTGGGCCCGGCTAGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: RTGRGCTLHSGG*TARGLGPARVE
Trigger: TTCTACCCTAGCCGGGCCCAGCCCCCTAGCAGTGCAGCCTCCCGAGTGCAGAGTGCAGCCCCTGCCCGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000156226.8
ENSMUST00000231618.2
CDS TCA 72 bp GAAATGATCTTGCGAGTTTCCTTTCGTGGGCCCTGCTaGGAGCGCCTGGGTCCCAGGCCAGCCGGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: EMILRVSFRGPC*ERLGPRPAGPR
Trigger: CCGAGGGCCGGCTGGCCTGGGACCCAGGCGCTCTCAGCAGGGCCCACGAAAGGAAACTCGCAAGATCATTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 72 bp ATCTACAAGTGGAAGGCCACGGTTGATAGGCGGGCCTaGAGGGCCACCCCGACGTTTGTCGCTGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: IYKWKATVDRRA*RATPTFVAALG
Trigger: GCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCCGCCTATCAACCGTGGCCTTCCACTTGTAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
ENSMUST00000231598.2
CDS CAA 72 bp GGATCCCGACCACGATCCTCTGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGGGATGGCCGCTCTCTA +
Preference number: 6 (lower is better)
Translates to: GSRPRSSVRLAA*RSPSGWDGRSL
Trigger: TAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAGGATCGTGGTCGGGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 90 bp CGCTTCACAGGATCCCGACCACGATCCTCTGTGAGGCTAGCTGCCTaGCGGAGTCCCTCAGGCTGGGATGGCCGCTCTCTACTTCGCTCC +
Preference number: 6 (lower is better)
Translates to: RFTGSRPRSSVRLAA*RSPSGWDGRSLLRS
Trigger: GGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGAGGATCGTGGTCGGGATCCTGTGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS GCA 72 bp CATTTGTGTCGCTTGAGGCGTGCTAAACACCACCGGTaGAGTCTGCCCCGGGGGAAACGCTGGCTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: HLCRLRRAKHHR*SLPRGKRWLWE
Trigger: CTCCCACAGCCAGCGTTTCCCCCGGGGCAGACTGCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000154950.8
ENSMUST00000156226.8
ENSMUST00000231618.2
CDS GCA 72 bp ATGGGGTTGGAGAAGGCGACGAAGGCTGAGATTCTGTaGCAGGGCTATGCTCTGGGCCAGGCAGTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: MGLEKATKAEIL*QGYALGQAVLA
Trigger: GGCCAGGACTGCCTGGCCCAGAGCATAGCCCTGGCACAGAATCTCAGCCTTCGTCGCCTTCTCCAACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000154594.8
CDS CCA 72 bp GACTGTATTCCAGCCACCATCATTGATAGGCGGGCCTaGAGGGCCACCCCGACGTTTGTCGCTGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: DCIPATIIDRRA*RATPTFVAALG
Trigger: GCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCCGCCTATCAATGATGGTGGCTGGAATACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115463.8
CDS CCA 72 bp CCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGGGTACTGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PKLGRACTWIEA*GSWLHRVLLSR
Trigger: CCTGGACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS CAA 72 bp GGAACGCCCCTGGCGGGGCTGAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCTAAACACCACCGGTGC +
Preference number: 6 (lower is better)
Translates to: GTPLAGLRRRVH*CRLRRAKHHRC
Trigger: GCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAGGGGCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150333.8
CDS CAA 90 bp ATCTGGCCGGATAATGACAGCAACCTGAGGCGACTCCCCATTGGGTaGAGGCTCCAGACTGCCTCCCGTCTGGGGAGGAGTGGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: IWPDNDSNLRRLPIG*RLQTASRLGRSGCG
Trigger: TCCACACCCACTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTATCCGGCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000140576.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000154594.8
CDS CAA 90 bp CCGGCTAGGGTAGAAGTGCTGGCGGGGCTGAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCTAAACACCACCGGTGCAGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: PARVEVLAGLRRRVH*CRLRRAKHHRCSLP
Trigger: GGGCAGACTGCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTTCTACCCTAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073840.12
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000142344.8
ENSMUST00000156226.8
ENSMUST00000231618.2
CDS CCA 72 bp CCCAAACTCGGTAGGGCTTGCACCTGGATAGAAGCCTaGGGCTCCTGGCTGCACAGGGTACTGCTGTGTTGG +
Preference number: 6 (lower is better)
Translates to: PKLGRACTWIEA*GSWLHRVLLCW
Trigger: CCAACACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACCGAGTTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS CCA 72 bp GGTGGTGAGGGGGCTCCGTTGAGCAGTTCCTCAGGCTaGGCAGTTGGAGCAATGGGCACGAGCGATTCAGAA +
Preference number: 6 (lower is better)
Translates to: GGEGAPLSSSSG*AVGAMGTSDSE
Trigger: TTCTGAATCGCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 72 bp GAGGCTAGCTGCCTTGCGGAGTCCCTCAGGCTGGGATaGCCGCTCTCTACTTCGCTCCTCCACTTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: EASCLAESLRLG*PLSTSLLHFFA
Trigger: AGCAAAGAAGTGGAGGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 72 bp TCTGTGAGGCTAGCTGCCTTGCGGAGTCCCTCAGGCTaGGATGGCCGCTCTCTACTTCGCTCCTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: SVRLAALRSPSG*DGRSLLRSSTS
Trigger: AGAAGTGGAGGAGCGAAGTAGAGAGCGGCCATCCCAGCCTGAGGGACTCCGCAAGGCAGCTAGCCTCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 72 bp ACAGCGCAGCCTTTGGAGGGCTCACTGGAGGTAGAGTaGCTTCCCGCTTCACAGGATCCCGACCACGATCCT +
Preference number: 6 (lower is better)
Translates to: TAQPLEGSLEVE*LPASQDPDHDP
Trigger: AGGATCGTGGTCGGGATCCTGTGAAGCGGGAAGCCACTCTACCTCCAGTGAGCCCTCCAAAGGCTGCGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 72 bp CTGGCGGGGCTGAGAAGGCGTGTTCATTTGTGTCGCTaGAGGCGTGCTAAACACCACCGGTGCAGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LAGLRRRVHLCR*RRAKHHRCSLP
Trigger: GGGCAGACTGCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000154950.8
ENSMUST00000156226.8
ENSMUST00000231618.2
CDS CAA 72 bp GCTGTGTGGGCACCATGCTGCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAGGCTGATTCTCTACCT +
Preference number: 6 (lower is better)
Translates to: AVWAPCCPQTLG*GCCQWEADSLP
Trigger: AGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp CAGAGACCTGAATCCTCCCTGGCGGGGCTGAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCTAAACACCACCGGTGCAGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: QRPESSLAGLRRRVH*CRLRRAKHHRCSLP
Trigger: GGGCAGACTGCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAGGGAGGATTCAGGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044783.14
ENSMUST00000115460.8
ENSMUST00000141034.8
ENSMUST00000154950.8
CDS CAA 90 bp TCACTGACTGGGCTTAAATCCACAGCTGGTGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGGGCAGTTGGAGCAATGGGCACGAGC +
Preference number: 6 (lower is better)
Translates to: SLTGLKSTAGGEGAP*SSSSGWAVGAMGTS
Trigger: GCTCGTGCCCATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACCAGCTGTGGATTTAAGCCCAGTCAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp TTCAAGGTAGCTGGACGAGTAGCTTCCGATGCTGTGTCTGAGGGCTaGGCTCCTGAGCCCCCACTGCTGCCCTTGCCCCAACTCAGTCGT +
Preference number: 6 (lower is better)
Translates to: FKVAGRVASDAVSEG*APEPPLLPLPQLSR
Trigger: ACGACTGAGTTGGGGCAAGGGCAGCAGTGGGGGCTCAGGAGCCAAGCCCTCAGACACAGCATCGGAAGCTACTCGTCCAGCTACCTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 72 bp GGCTTAAATCCACAGCTGGTGGTGAGGGGGCTCCGTTaGGCAGTTCCTCAGGCTGGGCAGTTGGAGCAATGG +
Preference number: 6 (lower is better)
Translates to: GLNPQLVVRGLR*AVPQAGQLEQW
Trigger: CCATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACCAGCTGTGGATTTAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS TCA 72 bp TCAGACTCTGGGCTTGGGTTGCTGCCAGTGGGAGGCTaGTTCTCTACCTCTGGTACTGCTGGGTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SDSGLGLLPVGG*FSTSGTAGSTS
Trigger: GGAGGTGGACCCAGCAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp GAATCCTCCCTGGCGGGGCTGAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCTAAACACCACCGGTGC +
Preference number: 6 (lower is better)
Translates to: ESSLAGLRRRVH*CRLRRAKHHRC
Trigger: GCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAGGGAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000044783.14
ENSMUST00000115460.8
ENSMUST00000141034.8
ENSMUST00000154950.8
CDS CAA 72 bp GATAATGACAGCAACCTGAGGCGACTCCCCATTGGGTaGAGGCTCCAGACTGCCTCCCGTCTGGGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: DNDSNLRRLPIG*RLQTASRLGRS
Trigger: ACTCCTCCCCAGACGGGAGGCAGTCTGGAGCCTCAACCCAATGGGGAGTCGCCTCAGGTTGCTGTCATTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000140576.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000154594.8
CDS CAA 72 bp GGGCTTAAATCCACAGCTGGTGGTGAGGGGGCTCCGTaGAGCAGTTCCTCAGGCTGGGCAGTTGGAGCAATG +
Preference number: 6 (lower is better)
Translates to: GLKSTAGGEGAP*SSSSGWAVGAM
Trigger: CATTGCTCCAACTGCCCAGCCTGAGGAACTGCTCAACGGAGCCCCCTCACCACCAGCTGTGGATTTAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp GGGCCTGGAGGGCCACCCCGACGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACTTTAATATGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: GPGGPPRRLSLP*AMSCCTLICSR
Trigger: CCGAGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000231598.2
CDS CAA 90 bp TTTCCTCAGGCTGTGTGGGCACCATGCTGCCCTCAGACTCTGGGCTaGGGTTGCTGCCAGTGGGAGGCTGATTCTCTACCTCTGGTACTG +
Preference number: 6 (lower is better)
Translates to: FPQAVWAPCCPQTLG*GCCQWEADSLPLVL
Trigger: CAGTACCAGAGGTAGAGAATCAGCCTCCCACTGGCAGCAACCCAAGCCCAGAGTCTGAGGGCAGCATGGTGCCCACACAGCCTGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp GGAAGGCCACGGTTGATAGGCGGGCCTGGAGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATGAGCTGCTGTACTTTAATATGTTCT +
Preference number: 6 (lower is better)
Translates to: GRPRLIGGPGGPPRR*SLPLAMSCCTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCCGCCTATCAACCGTGGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
ENSMUST00000231598.2
CDS CAA 90 bp TTGATAGGCGGGCCTGGAGGGCCACCCCGACGTTTGTCGCTGCCCTaGGCCATGAGCTGCTGTACTTTAATATGTTCTCGGTGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LIGGPGGPPRRLSLP*AMSCCTLICSRCSS
Trigger: GGAAGAGCACCGAGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCCGCCTATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000231598.2
CDS CCA 72 bp GGTAGGGCTTGCACCTGGATAGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTGTGTTGGGACAACATA +
Preference number: 6 (lower is better)
Translates to: GRACTWIEAWGS*LHRVLLCWDNI
Trigger: TATGTTGTCCCAACACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS CCA 72 bp GGTAGGGCTTGCACCTGGATAGAAGCCTGGGGCTCCTaGCTGCACAGGGTACTGCTGTCCAGGGATATAGTA +
Preference number: 6 (lower is better)
Translates to: GRACTWIEAWGS*LHRVLLSRDIV
Trigger: TACTATATCCCTGGACAGCAGTACCCTGTGCAGCCAGGAGCCCCAGGCTTCTATCCAGGTGCAAGCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS CAA 72 bp GGGGGCCCACGGTTGCTGAGGGCTGGTCGGCCAAGATaGGCAAAAGATGGAGTGAAATCTGGGCCACAGTTT +
Preference number: 6 (lower is better)
Translates to: GGPRLLRAGRPR*AKDGVKSGPQF
Trigger: AAACTGTGGCCCAGATTTCACTCCATCTTTTGCCAATCTTGGCCGACCAGCCCTCAGCAACCGTGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp GTAGAAGTGCTGGCGGGGCTGAGAAGGCGTGTTCATTaGTGTCGCTTGAGGCGTGCTAAACACCACCGGTGC +
Preference number: 6 (lower is better)
Translates to: VEVLAGLRRRVH*CRLRRAKHHRC
Trigger: GCACCGGTGGTGTTTAGCACGCCTCAAGCGACACAAATGAACACGCCTTCTCAGCCCCGCCAGCACTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000073840.12
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000142344.8
ENSMUST00000156226.8
ENSMUST00000231618.2
CDS CAA 90 bp CAAAACTGGGGCAGGAGCCACACTAGCAGGAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCCAGCATAGGTCCCAAACTCGGTAGG +
Preference number: 6 (lower is better)
Translates to: QNWGRSHTSRKLLHT*GWVIGSSIGPKLGR
Trigger: CCTACCGAGTTTGGGACCTATGCTGGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCCCCAGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CAA 90 bp GGCCGCTCTCTACTTCGCTCCTCCACTTCTTTGCTAAAACTTCGCTaGGTGGCAGGTGTTCTGGCACGATCAAGTCGGTCCCCACGGTCA +
Preference number: 6 (lower is better)
Translates to: GRSLLRSSTSLLKLR*VAGVLARSSRSPRS
Trigger: TGACCGTGGGGACCGACTTGATCGTGCCAGAACACCTGCCACCAAGCGAAGTTTTAGCAAAGAAGTGGAGGAGCGAAGTAGAGAGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 90 bp CAGCCACCATCATTGATAGGCGGGCCTGGAGGGCCACCCCGACGTTaGTCGCTGCCCTTGGCCATGAGCTGCTGTACTTTAATATGTTCT +
Preference number: 6 (lower is better)
Translates to: QPPSLIGGPGGPPRR*SLPLAMSCCTLICS
Trigger: AGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGGCCCTCCAGGCCCGCCTATCAATGATGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115463.8
CDS CCA 72 bp GCTGCTGAAACATCTGGGGTGTCAGCTTATTCAGGATaGAGCGTACCCTGCGGAACAGGTCCTGGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: AAETSGVSAYSG*SVPCGTGPGSC
Trigger: GCAAGACCCAGGACCTGTTCCGCAGGGTACGCTCCATCCTGAATAAGCTGACACCCCAGATGTTTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp GGCAGGAGCCACACTAGCAGGAAACTGCTGCACACCTaGGGCTGGGTAATAGGCTCCAGCATAGGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: GRSHTSRKLLHT*GWVIGSSIGPK
Trigger: TTTGGGACCTATGCTGGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CCA 72 bp AGCCACACTAGCAGGAAACTGCTGCACACCTTGGGCTaGGTAATAGGCTCCAGCATAGGTCCCAAACTCGGT +
Preference number: 6 (lower is better)
Translates to: SHTSRKLLHTLG*VIGSSIGPKLG
Trigger: ACCGAGTTTGGGACCTATGCTGGAGCCTATTACCCAGCCCAAGGTGTGCAGCAGTTTCCTGCTAGTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CCA 72 bp CTTAGGAGCAATCTGGGGTGGCTGGTTCATCAAAACTaGGGCAGGAGCCACACTAGCAGGAAACTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LRSNLGWLVHQN*GRSHTSRKLLH
Trigger: GTGCAGCAGTTTCCTGCTAGTGTGGCTCCTGCCCCAGTTTTGATGAACCAGCCACCCCAGATTGCTCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154950.8
ENSMUST00000231618.2
CDS CCA 72 bp CCTCTGGTTCCAGATCCTCAGATGGGATCACGCCATTaGGCTCATGAGTTTCAACCTTGTGAGGCACCAGGG +
Preference number: 6 (lower is better)
Translates to: PLVPDPQMGSRH*AHEFQPCEAPG
Trigger: CCCTGGTGCCTCACAAGGTTGAAACTCATGAGCCCAATGGCGTGATCCCATCTGAGGATCTGGAACCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 72 bp CTGAAGGAGCCACAGGTGGAGCAGGAGAGAGAATGCTaGCCAGTGCTGCTGATGAAACCTTCTTGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LKEPQVEQEREC*PVLLMKPSWPV
Trigger: AACAGGCCAAGAAGGTTTCATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTCCACCTGTGGCTCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp GGAGCAGGAGAGAGAATGCTGGCCAGTGCTGCTGATGAAACCTTCTaGGCCTGTTCCTCTGGCTCACTGACTGGGCTTAAATCCACAGCT +
Preference number: 6 (lower is better)
Translates to: GAGERMLASAADETF*ACSSGSLTGLKSTA
Trigger: AGCTGTGGATTTAAGCCCAGTCAGTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGCAGCACTGGCCAGCATTCTCTCTCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS GCA 72 bp CCACCCCGACGTTTGTCGCTGCCCTTGGCCATGAGCTaGTGTACTTTAATATGTTCTCGGTGCTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: PPRRLSLPLAMS*CTLICSRCSSI
Trigger: GATGGAAGAGCACCGAGAACATATTAAAGTACAGCAGCTCATGGCCAAGGGCAGCGACAAACGTCGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
ENSMUST00000231598.2
CDS CAA 72 bp TCCATTCGAGGCTTGGCTTTTGCAAAGTCCAGGTCTTaGCCTATAGTGGTGAGGAGGCGGCAGAGGCATTCC +
Preference number: 6 (lower is better)
Translates to: SIRGLAFAKSRS*PIVVRRRQRHS
Trigger: GGAATGCCTCTGCCGCCTCCTCACCACTATAGGCAAAGACCTGGACTTTGCAAAAGCCAAGCCTCGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp TTTGTGATCTTGGTGAGCCGTGAGGTGTCAATGGGGCGACTGCCTTaGCTAATGGGGACTGTATTCCAGCCACCATCATTGATAGGCGGG +
Preference number: 6 (lower is better)
Translates to: FVILVSREVSMGRLP*LMGTVFQPPSLIGG
Trigger: CCCGCCTATCAATGATGGTGGCTGGAATACAGTCCCCATTAGCAAAGGCAGTCGCCCCATTGACACCTCACGGCTCACCAAGATCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115463.8
CDS TCA 72 bp CCCCTGTCCAGGGATATAGTAGGCTCCTTGGGAGGCTaGGTAGGAGATCTGGGAAGGGATCATCATTACTTG +
Preference number: 6 (lower is better)
Translates to: PLSRDIVGSLGG*VGDLGRDHHYL
Trigger: CAAGTAATGATGATCCCTTCCCAGATCTCCTACTCAGCCTCCCAAGGAGCCTACTATATCCCTGGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000142344.8
ENSMUST00000151679.3
ENSMUST00000154950.8
CDS TCA 72 bp ATCAATGGAACCAGGCTTTGTGATCTTGGTGAGCCGTaGGGTGTCAATGGGGCGACTGCCTTTGCTAATGGG +
Preference number: 6 (lower is better)
Translates to: INGTRLCDLGEP*GVNGATAFANG
Trigger: CCCATTAGCAAAGGCAGTCGCCCCATTGACACCTCACGGCTCACCAAGATCACAAAGCCTGGTTCCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS GCA 72 bp CCACAGTTTATGCCAGGTAGTCTGGAGGGATCCAGTTaGCGAAGTGGTGTTTTATTGGCCTTGTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: PQFMPGSLEGSS*RSGVLLALSST
Trigger: GGTGCTGGACAAGGCCAATAAAACACCACTTCGGCAACTGGATCCCTCCAGACTACCTGGCATAAACTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS GCA 72 bp TCCATCAGCATCCTCTTCCCCTCGATCCTTATCAGCTaGTGTCCGTTTGCTACTGGGTTTCCAAGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: SISILFPSILIS*CPFATGFPSLL
Trigger: GAGAAGGCTTGGAAACCCAGTAGCAAACGGACAGCAGCTGATAAGGATCGAGGGGAAGAGGATGCTGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 72 bp TTGATCAATAGTCTTAGGACCCTGATCCCCTCGGCGTaGCACCCAATTACTCTGCCGCAGATCGAGTACATC +
Preference number: 6 (lower is better)
Translates to: LINSLRTLIPSA*HPITLPQIEYI
Trigger: GATGTACTCGATCTGCGGCAGAGTAATTGGGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTATTGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 72 bp GAGAGAATGCTGGCCAGTGCTGCTGATGAAACCTTCTaGGCCTGTTCCTCTGGCTCACTGACTGGGCTTAAA +
Preference number: 6 (lower is better)
Translates to: ERMLASAADETF*ACSSGSLTGLK
Trigger: TTTAAGCCCAGTCAGTGAGCCAGAGGAACAGGCCAAGAAGGTTTCATCAGCAGCACTGGCCAGCATTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp CTACTTCGCTCCTCCACTTCTTTGCTAAAACTTCGCTaGGTGGCAGGTGTTCTGGCACGATCAAGTCGGTCC +
Preference number: 6 (lower is better)
Translates to: LLRSSTSLLKLR*VAGVLARSSRS
Trigger: GGACCGACTTGATCGTGCCAGAACACCTGCCACCAAGCGAAGTTTTAGCAAAGAAGTGGAGGAGCGAAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 90 bp CTGCCCTTGCCCCAACTCAGTCGTCCTCCAGGTGCAAAAAGCTGGTaGTTAGAATCAATGGAACCAGGCTTTGTGATCTTGGTGAGCCGT +
Preference number: 6 (lower is better)
Translates to: LPLPQLSRPPGAKSW*LESMEPGFVILVSR
Trigger: ACGGCTCACCAAGATCACAAAGCCTGGTTCCATTGATTCTAACAACCAGCTTTTTGCACCTGGAGGACGACTGAGTTGGGGCAAGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CAA 90 bp AGTGCGGGCCCCAGACATGATCTCTTCTGTGATATCCTTCCCTCCTaGGTTTGGGTCTCGAATTCGGATAGTTTTCCGTTCCCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: SAGPRHDLFCDILPS*VWVSNSDSFPFPLR
Trigger: CCTAAGAGGGAACGGAAAACTATCCGAATTCGAGACCCAAACCAAGGAGGGAAGGATATCACAGAAGAGATCATGTCTGGGGCCCGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000128840.8
ENSMUST00000136713.5
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000142344.8
ENSMUST00000150333.8
ENSMUST00000151679.3
ENSMUST00000154594.8
CDS CAA 90 bp TTTGTGATCTTGGTGAGCCGTGAGGTGTCAATGGGGCGACTGCCTTaGCTAATGGGGACTGTATTCCAGCCACCATCATCTACAAGTGGA +
Preference number: 6 (lower is better)
Translates to: FVILVSREVSMGRLP*LMGTVFQPPSSTSG
Trigger: TCCACTTGTAGATGATGGTGGCTGGAATACAGTCCCCATTAGCAAAGGCAGTCGCCCCATTGACACCTCACGGCTCACCAAGATCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000143939.8
CDS TCA 72 bp GTGGTGTTTTATTGGCCTTGTCCAGCACCACATCAGTaGTATGGGGCAATCCTTCTGGCTTCTGCATGCTGG +
Preference number: 6 (lower is better)
Translates to: VVFYWPCPAPHQ*YGAILLASACW
Trigger: CCAGCATGCAGAAGCCAGAAGGATTGCCCCATATCACTGATGTGGTGCTGGACAAGGCCAATAAAACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS TCA 72 bp CTGCTGTCCAGGGATATAGTAGGCTCCTTGGGAGGCTaGGTAGGAGATCTGGGAAGGGATCATCATTACTTG +
Preference number: 6 (lower is better)
Translates to: LLSRDIVGSLGG*VGDLGRDHHYL
Trigger: CAAGTAATGATGATCCCTTCCCAGATCTCCTACTCAGCCTCCCAAGGAGCCTACTATATCCCTGGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140576.8
ENSMUST00000141034.8
ENSMUST00000231618.2
CDS CCA 72 bp TTCTACTTCCAGTATGGGTTCGGCAAGAGTGGGTTCTaGAGAGAGGCAATACGGCTCCCCAGTTTCACAAGA +
Preference number: 6 (lower is better)
Translates to: FYFQYGFGKSGF*REAIRLPSFTR
Trigger: TCTTGTGAAACTGGGGAGCCGTATTGCCTCTCTCCAGAACCCACTCTTGCCGAACCCATACTGGAAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp TTCTCGGTGCTCTTCCATCTCAGCCTCCTTGTGAATTaGATCAATAGTCTTAGGACCCTGATCCCCTCGGCG +
Preference number: 6 (lower is better)
Translates to: FSVLFHLSLLVN*INSLRTLIPSA
Trigger: CGCCGAGGGGATCAGGGTCCTAAGACTATTGATCAAATTCACAAGGAGGCTGAGATGGAAGAGCACCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 72 bp GTTTTATTGGCCTTGTCCAGCACCACATCAGTGATATaGGGCAATCCTTCTGGCTTCTGCATGCTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: VLLALSSTTSVI*GNPSGFCMLAK
Trigger: CTTTGCCAGCATGCAGAAGCCAGAAGGATTGCCCCATATCACTGATGTGGTGCTGGACAAGGCCAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp GAAACCTGGAGAGGACTGGAAGAGAACTCAGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACTTCCAGTATGGGTTCGGCAAGAGTG +
Preference number: 6 (lower is better)
Translates to: ETWRGLEENSDSGMG*LSVTSTSSMGSARV
Trigger: CACTCTTGCCGAACCCATACTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 90 bp TTTAATATGTTCTCGGTGCTCTTCCATCTCAGCCTCCTTGTGAATTaGATCAATAGTCTTAGGACCCTGATCCCCTCGGCGTGGCACCCA +
Preference number: 6 (lower is better)
Translates to: FNMFSVLFHLSLLVN*INSLRTLIPSAWHP
Trigger: TGGGTGCCACGCCGAGGGGATCAGGGTCCTAAGACTATTGATCAAATTCACAAGGAGGCTGAGATGGAAGAGCACCGAGAACATATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS CCA 72 bp GGAAACCTGGAGAGGACTGGAAGAGAACTCAGATTCTaGAATGGGTTTGCTGAGTGTCACTTCTACTTCCAG +
Preference number: 6 (lower is better)
Translates to: GNLERTGRELRF*NGFAECHFYFQ
Trigger: CTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCTCCAGGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CCA 72 bp TTGCCCCAACTCAGTCGTCCTCCAGGTGCAAAAAGCTaGTTGTTAGAATCAATGGAACCAGGCTTTGTGATC +
Preference number: 6 (lower is better)
Translates to: LPQLSRPPGAKS*LLESMEPGFVI
Trigger: GATCACAAAGCCTGGTTCCATTGATTCTAACAACCAGCTTTTTGCACCTGGAGGACGACTGAGTTGGGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 72 bp GACTGGAAGAGAACTCAGATTCTGGAATGGGTTTGCTaGGTGTCACTTCTACTTCCAGTATGGGTTCGGCAA +
Preference number: 6 (lower is better)
Translates to: DWKRTQILEWVC*VSLLLPVWVRQ
Trigger: TTGCCGAACCCATACTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS CAA 72 bp AGAGGACTGGAAGAGAACTCAGATTCTGGAATGGGTTaGCTGAGTGTCACTTCTACTTCCAGTATGGGTTCG +
Preference number: 6 (lower is better)
Translates to: RGLEENSDSGMG*LSVTSTSSMGS
Trigger: CGAACCCATACTGGAAGTAGAAGTGACACTCAGCAAACCCATTCCAGAATCTGAGTTCTCTTCCAGTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8
CDS TCA 72 bp CGTCTGTTATCTGTGTTCTCTGCGGGTAATGTTTGTTaGAGAGCAGAAAAGCGATTCAAGGTAGCTGGACGA +
Preference number: 6 (lower is better)
Translates to: RLLSVFSAGNVC*RAEKRFKVAGR
Trigger: TCGTCCAGCTACCTTGAATCGCTTTTCTGCTCTTCAACAAACATTACCCGCAGAGAACACAGATAACAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000143939.8
CDS TCA 72 bp TTAGTTTTATGTCTTCAGTCATTATCACTGAGGAAATaGTCTTGCGAGTTTCCTTTCGTGGGCCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: LVLCLQSLSLRK*SCEFPFVGPAE
Trigger: CTCAGCAGGGCCCACGAAAGGAAACTCGCAAGATCATTTCCTCAGTGATAATGACTGAAGACATAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000044783.14
ENSMUST00000073840.12
ENSMUST00000115457.8
ENSMUST00000115460.8
ENSMUST00000115461.8
ENSMUST00000115463.8
ENSMUST00000128594.8
ENSMUST00000142344.8
ENSMUST00000143939.8
ENSMUST00000150333.8