Pregenerated sensors for EIF4EBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020091Ensembl transcript IDs: ENSMUST00000020288.15, ENSMUST00000167087.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCGAGGCTGGCTGCACGGCGGCTCAGTCCTCTTCAGAGGCCCCTaGTGTATTCTCAGGCAGACCGCTGAGAGCAGGCTGGACTCACCA | + |
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Preference number: 1 (lower is better) Translates to: PRGWLHGGSVLFRGP*CILRQTAESRLDSP Trigger: TGGTGAGTCCAGCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGGGGCCTCTGAAGAGGACTGAGCCGCCGTGCAGCCAGCCTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CCA 90 bp | CTCCTCTGCATGCTGAGCTGGCCTGGCTCACAGAGACGCTGCTTCTaGGTGGGAGACCTTGACCAATGCACTGACTCACCTGGCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: LLCMLSWPGSQRRCF*VGDLDQCTDSPGTW Trigger: CCAGGTGCCAGGTGAGTCAGTGCATTGGTCAAGGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCATGCAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | GGAATGCAGCAGAGGTGCAGGAGGTACAGGACTGTGCTCCAGAGCTaGGGACAAATGTCCCCCACATCCAGCGCTCCACCAGTAGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GMQQRCRRYRTVLQS*GQMSPTSSAPPVVG Trigger: GCCCACTACTGGTGGAGCGCTGGATGTGGGGGACATTTGTCCTCAGCTCTGGAGCACAGTCCTGTACCTCCTGCACCTCTGCTGCATTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR TCA 90 bp | ACAAGGCACCCAGGAGGTGATTTGTTCGTTTGCTCCTCTGCATGCTaGGCTGGCCTGGCTCACAGAGACGCTGCTTCTGGGTGGGAGACC | + |
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Preference number: 1 (lower is better) Translates to: TRHPGGDLFVCSSAC*AGLAHRDAASGWET Trigger: GGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCATGCAGAGGAGCAAACGAACAAATCACCTCCTGGGTGCCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | GGTTCCATCCCCGATACATGGCTGCCAACACCGGAGCCGTGTGCATaGGCTGGGTGTCTGGACACTCAGTGGAACCCAACTCAACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: GSIPDTWLPTPEPCA*AGCLDTQWNPTQLG Trigger: TCCCAGTTGAGTTGGGTTCCACTGAGTGTCCAGACACCCAGCTCATGCACACGGCTCCGGTGTTGGCAGCCATGTATCGGGGATGGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 90 bp | CTTCCTCCCAGAGAAAGGGGAGGCTGCTGTCACATGTCCCAGGAATaGAGCAGAGGTGCAGGAGGTACAGGACTGTGCTCCAGAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LPPRERGGCCHMSQE*SRGAGGTGLCSRAE Trigger: CTCAGCTCTGGAGCACAGTCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTCCCCTTTCTCTGGGAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR GCA 90 bp | CCTGGCTCACAGAGACGCTGCTTCTGGGTGGGAGACCTTGACCAATaGACTGACTCACCTGGCACCTGGCTTCCACACCATCACCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PGSQRRCFWVGDLDQ*TDSPGTWLPHHHQK Trigger: CTTCTGGTGATGGTGTGGAAGCCAGGTGCCAGGTGAGTCAGTGCATTGGTCAAGGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | GGCTGTGGTCCAGGAGGAAGCCGCTCTGTGCAGACCGCTGTTCAGTaGGGAAGCAGATGCTCTTCTCACAACCTCCTCACTTCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GCGPGGSRSVQTAVQ*GSRCSSHNLLTSAG Trigger: TCCTGCTGAAGTGAGGAGGTTGTGAGAAGAGCATCTGCTTCCTCACTGAACAGCGGTCTGCACAGAGCGGCTTCCTCCTGGACCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 90 bp | GTCTCAGATCCATTCCGGGCTGTGGTCCAGGAGGAAGCCGCTCTGTaGAGACCGCTGTTCAGTGAGGAAGCAGATGCTCTTCTCACAACC | + |
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Preference number: 1 (lower is better) Translates to: VSDPFRAVVQEEAAL*RPLFSEEADALLTT Trigger: GGTTGTGAGAAGAGCATCTGCTTCCTCACTGAACAGCGGTCTGCACAGAGCGGCTTCCTCCTGGACCACAGCCCGGAATGGATCTGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | CAGGGCACCCCTGATTGCTTTACTGTCTCCCCTCAGGAGGATGGATaGATGAGCCTGTGTGTCGGAAGCCTCTCTCCTGGGATCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: QGTPDCFTVSPQEDG*MSLCVGSLSPGISM Trigger: CATGGAGATCCCAGGAGAGAGGCTTCCGACACACAGGCTCATCCATCCATCCTCCTGAGGGGAGACAGTAAAGCAATCAGGGGTGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | ATACATGGCTGCCAACACCGGAGCCGTGTGCATGAGCTGGGTGTCTaGACACTCAGTGGAACCCAACTCAACTGGGAAGGTCCGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: IHGCQHRSRVHELGV*TLSGTQLNWEGPRS Trigger: GCTTCTCGGACCTTCCCAGTTGAGTTGGGTTCCACTGAGTGTCCAGACACCCAGCTCATGCACACGGCTCCGGTGTTGGCAGCCATGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | GGAAGGGGGTATAGAGGCAAGAACGGGCGTTCTGTGCTGGATTCATaGGAGTCTGGGTCTGAAGCCCTGGCAGGGGCACAGCCATGTATA | + |
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Preference number: 1 (lower is better) Translates to: GRGYRGKNGRSVLDS*ESGSEALAGAQPCI Trigger: TATACATGGCTGTGCCCCTGCCAGGGCTTCAGACCCAGACTCCCATGAATCCAGCACAGAACGCCCGTTCTTGCCTCTATACCCCCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | GCACCCCTGATTGCTTTACTGTCTCCCCTCAGGAGGATGGATGGATaGGCCTGTGTGTCGGAAGCCTCTCTCCTGGGATCTCCATGTGGA | + |
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Preference number: 1 (lower is better) Translates to: APLIALLSPLRRMDG*ACVSEASLLGSPCG Trigger: TCCACATGGAGATCCCAGGAGAGAGGCTTCCGACACACAGGCTCATCCATCCATCCTCCTGAGGGGAGACAGTAAAGCAATCAGGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 90 bp | CACCCAAGACAAGACAGAAGCCTTCCTCCCAGAGAAAGGGGAGGCTaGTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACA | + |
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Preference number: 1 (lower is better) Translates to: HPRQDRSLPPRERGG*CHMSQECSRGAGGT Trigger: TGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTCCCCTTTCTCTGGGAGGAAGGCTTCTGTCTTGTCTTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CCA 90 bp | ACGGGCGTTCTGTGCTGGATTCATGGGAGTCTGGGTCTGAAGCCCTaGCAGGGGCACAGCCATGTATATACCAGTACATCCAGCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: TGVLCWIHGSLGLKP*QGHSHVYTSTSSLL Trigger: CAAGAGGCTGGATGTACTGGTATATACATGGCTGTGCCCCTGCCAGGGCTTCAGACCCAGACTCCCATGAATCCAGCACAGAACGCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | CCACTGACTGAGGGAAGAGGAGGTGCACAAGCAGACTCCCCAAGATaGCAAGAAAAGGGAAACAGTTCCCTGCTCAGTGCCCACGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PLTEGRGGAQADSPR*QEKGNSSLLSAHVS Trigger: TGAGACGTGGGCACTGAGCAGGGAACTGTTTCCCTTTTCTTGCCATCTTGGGGAGTCTGCTTGTGCACCTCCTCTTCCCTCAGTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | TATTTCAGCAGAACAGGAGGGCTGAGAGCTCAGAAGGGAAGTCACTaGAGGGGGTTCTTCCTCATGAAGGCTGTTGTCCCCACAACCGAG | + |
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Preference number: 1 (lower is better) Translates to: YFSRTGGLRAQKGSH*RGFFLMKAVVPTTE Trigger: CTCGGTTGTGGGGACAACAGCCTTCATGAGGAAGAACCCCCTTCAGTGACTTCCCTTCTGAGCTCTCAGCCCTCCTGTTCTGCTGAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | AGGGCATGGCGAATTAAAGGCACTGTAACTTTCTTCTACCTCCTCTaGGGTCAACCATTCAGGAGGAAGCAGGGTGCTCTGGCACAGACT | + |
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Preference number: 1 (lower is better) Translates to: RAWRIKGTVTFFYLL*GQPFRRKQGALAQT Trigger: AGTCTGTGCCAGAGCACCCTGCTTCCTCCTGAATGGTTGACCCCAGAGGAGGTAGAAGAAAGTTACAGTGCCTTTAATTCGCCATGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | CTTAGTATAGGCATCCAATACAACCAGAAACTCCCAGGGCACCCCTaGTTGCTTTACTGTCTCCCCTCAGGAGGATGGATGGATGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LSIGIQYNQKLPGHP*LLYCLPSGGWMDEP Trigger: AGGCTCATCCATCCATCCTCCTGAGGGGAGACAGTAAAGCAATCAGGGGTGCCCTGGGAGTTTCTGGTTGTATTGGATGCCTATACTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | AAACTCCAAGAATCCCCAAGCATTGGAGACCCCCAAGCTTATTCCTaGGACAGCGACCGTCACAGAGGGTTACACTCCGAGCTATTTCAC | + |
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Preference number: 1 (lower is better) Translates to: KLQESPSIGDPQAYS*DSDRHRGLHSELFH Trigger: GTGAAATAGCTCGGAGTGTAACCCTCTGTGACGGTCGCTGTCTCAGGAATAAGCTTGGGGGTCTCCAATGCTTGGGGATTCTTGGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | GACAAGCAGCTCCCCAGAATGCCCCCAGTTCCTTTAGTCAATTCGTaGCTAAAGGCAAACAGAAGTGGTAAGCAATGCTTAAAGCGGCCG | + |
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Preference number: 1 (lower is better) Translates to: DKQLPRMPPVPLVNS*LKANRSGKQCLKRP Trigger: CGGCCGCTTTAAGCATTGCTTACCACTTCTGTTTGCCTTTAGCCACGAATTGACTAAAGGAACTGGGGGCATTCTGGGGAGCTGCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 90 bp | GCCTCTTGCTGTCACCCTTATACCTCACAAATGTCAACCAGAATCTaGATCTGCTGGGAAGTATCTCAGCGCAGTAGGTCTTTTTCTACT | + |
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Preference number: 1 (lower is better) Translates to: ASCCHPYTSQMSTRI*ICWEVSQRSRSFST Trigger: AGTAGAAAAAGACCTACTGCGCTGAGATACTTCCCAGCAGATGCAGATTCTGGTTGACATTTGTGAGGTATAAGGGTGACAGCAAGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 90 bp | TTCTTGGGAAATGACCAGGGAAGCTACAGGGACTGCTTTCTTCTGTaGACTGGTCAGCTCCACAGAATAATCCAAGGGCTTATTCATCAA | + |
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Preference number: 1 (lower is better) Translates to: FLGNDQGSYRDCFLL*TGQLHRIIQGLIHQ Trigger: TTGATGAATAAGCCCTTGGATTATTCTGTGGAGCTGACCAGTCCACAGAAGAAAGCAGTCCCTGTAGCTTCCCTGGTCATTTCCCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CCA 90 bp | CCGTTGGTGAGGATTTATTTCCCTAGTTCCAAACACCTGCTTGTTTaGCAGGACAGTGAAAACAAACTGATCATGGGATCACACACGGTC | + |
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Preference number: 1 (lower is better) Translates to: PLVRIYFPSSKHLLV*QDSENKLIMGSHTV Trigger: GACCGTGTGTGATCCCATGATCAGTTTGTTTTCACTGTCCTGCCAAACAAGCAGGTGTTTGGAACTAGGGAAATAAATCCTCACCAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 90 bp | TCACCTGACGTTAAGTTCTGCCAACAGGCACCATGTTCCAAGACCTaGCTAAAGGAAAGCTATAATTTCACACGGTGGGGAAGGTATTTT | + |
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Preference number: 1 (lower is better) Translates to: SPDVKFCQQAPCSKT*LKESYNFTRWGRYF Trigger: AAAATACCTTCCCCACCGTGTGAAATTATAGCTTTCCTTTAGGCAGGTCTTGGAACATGGTGCCTGTTGGCAGAACTTAACGTCAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR TCA 90 bp | TCATTGGAAGCTGATTTCTTGTCTTGTGCAATTATCTCACACTGCTaGTTTACGGAGGTCAAAGACCAGGTAGTGGCGGCCTTCAGAATA | + |
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Preference number: 1 (lower is better) Translates to: SLEADFLSCAIISHC*FTEVKDQVVAAFRI Trigger: TATTCTGAAGGCCGCCACTACCTGGTCTTTGACCTCCGTAAATCAGCAGTGTGAGATAATTGCACAAGACAAGAAATCAGCTTCCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR GCA 90 bp | AGGGAAGGACAGGGAGAGCCCAGGAACACAATGGGCACTAAACCTCCTTCACCCCAGGTGCACACAGGCTaGTCCACGAGGCCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: REGQGEPRNTMGTKPPSPQVHTG*STRPPS Trigger: GGAAGGAGGCCTCGTGGAGCAGCCTGTGTGCACCTG...GGGTGAAGGAGGTTTAGTGCCCATTGTGTTCCTGGGCTCTCCCTGTCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGGTGCTGCTTGGAGACTGCCCTAGACTTGGGGCAAGTCTCAACAGGGCAACTGGGCCAGTCAGGTaGACACAGGCTGCTCCACGA | + |
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Preference number: 2 (lower is better) Translates to: AEVLLGDCPRLGASLNRATGPVR*TQAAPR Trigger: TCGTGGAGCAGCCTGTGTGCACCTGACTGGCCCAGT...TGCCCTGTTGAGACTTGCCCCAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCAACTGGGAAGGTCCGAGAAGCCCAAGGAGACAGTACCCAGGCCAGCCCCCAGGGAAACAGTTCCCTaGTCAGTGCCCACGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TQLGRSEKPKETVPRPAPRETVP*SVPTSQ Trigger: CTGAGACGTGGGCACTGAGCAGGGAACTGTTTCCCT...GGGGGCTGGCCTGGGTACTGTCTCCTTGGGCTTCTCGGACCTTCCCAGTTGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGAGGCCCCTGATGTATTCTCAGGCAGACCGCTGAGAGCAGGCTGGACTACTGGGCCAGTCAGGTaGACACAGGCTGCTCCACGA | + |
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Preference number: 2 (lower is better) Translates to: SSEAPDVFSGRPLRAGWTTGPVR*TQAAPR Trigger: TCGTGGAGCAGCCTGTGTGCACCTGACTGGCCCAGT...AGTCCAGCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGGGGCCTCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGCTGGACTCACCAGGTGCAGGCCAAGGTGTTGGCACTTCTGCTCTAAAACAGAGCCACGGGTGTaGCAGGGCAGACTCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: EQAGLTRCRPRCWHFCSKTEPRV*QGRLCL Trigger: TAGGCAGAGTCTGCCCTGGCACACCCGTGGCTCTGT...TTTAGAGCAGAAGTGCCAACACCTTGGCCTGCACCTGGTGAGTCCAGCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CAA 90 bp | AGTATTACTGGAGCTAACCTGCGGCCATTAATTGGGGTAAAGGCATaGGCTTGTGCCTGTGTGGTCCCCATGGGCCCTGCCTCCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SITGANLRPLIGVKA*ACACVVPMGPASCW Trigger: CCAGCAGGAGGCAGGGCCCATGGGGACCACACAGGCACAAGCCAATGCCTTTACCCCAATTAATGGCCGCAGGTTAGCTCCAGTAATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTCTCCTGGGATCTCCATGTGGACCACGGTACAGGAGAGTGGGATATGGGACATCTCCCATTATTTaGCACCCAGAGGGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: ASLLGSPCGPRYRRVGYGTSPII*HPEGTG Trigger: CCCTGTCCCCTCTGGGTGCCAAATAATGGGAGATGT...CCCATATCCCACTCTCCTGTACCGTGGTCCACATGGAGATCCCAGGAGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR CCA 90 bp | CCGTTACCAGAGCAGGAAACACTGCTAAGCACTGCAGGACCGAGTCAACAGCAGGCCGTGTGCATGAGCTaGGTGTCTGGACACTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PLPEQETLLSTAGPSQQQAVCMS*VSGHSV Trigger: CACTGAGTGTCCAGACACCCAGCTCATGCACACGGC...CTGCTGTTGACTCGGTCCTGCAGTGCTTAGCAGTGTTTCCTGCTCTGGTAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CAA 90 bp | CCCAACCCCTACAAGCAGAGGTGCTGCTTGGAGACTGCCCTAGACTaGGGGCAAGTCTCAACAGGGCAGGAAGATTCTTGGGAAATGACC | + |
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Preference number: 2 (lower is better) Translates to: PNPYKQRCCLETALD*GQVSTGQEDSWEMT Trigger: GGTCATTTCCCAAGAATCTTCCTGCCCTGTTGAGACTTGCCCCAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGCTTGTAGGGGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTTACCAGAGCAGGAAACACTGCTAAGCACTGCAGGACCGAGTCAACAGCAGCCCTACAAGCAGAGGTaGTGCTTGGAGACTGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: PLPEQETLLSTAGPSQQQPYKQR*CLETAL Trigger: TAGGGCAGTCTCCAAGCAGCACCTCTGCTTGTAGGG...CTGCTGTTGACTCGGTCCTGCAGTGCTTAGCAGTGTTTCCTGCTCTGGTAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAGAGGCCCCTGATGTATTCTCAGGCAGACCGCTGAGAGCAGGCTGGACTGGAGGTACAGGACTGTaGTCCAGAGCTGAGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: SSEAPDVFSGRPLRAGWTGGTGL*SRAEDK Trigger: TTTGTCCTCAGCTCTGGAGCACAGTCCTGTACCTCC...AGTCCAGCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGGGGCCTCTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGACAGGCAAAGACCAGCTGGTCACCAAGGGGTCCCTTCAGGAGGGCTTAGGAGGTACAGGACTGTaGTCCAGAGCTGAGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: CQTGKDQLVTKGSLQEGLGGTGL*SRAEDK Trigger: TTTGTCCTCAGCTCTGGAGCACAGTCCTGTACCTCC...TAAGCCCTCCTGAAGGGACCCCTTGGTGACCAGCTGGTCTTTGCCTGTCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGCCTTCCTCCCAGAGAAAGGGGAGGCTGCTGTCACATGTCCCAGGAATGACACTGTGTTCCTACTaGGCCAGTCAGGTGCACACA | + |
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Preference number: 2 (lower is better) Translates to: QKPSSQRKGRLLSHVPGMTLCSY*ASQVHT Trigger: TGTGTGCACCTGACTGGCCCAGTAGGAACACAGTGT...CATTCCTGGGACATGTGACAGCAGCCTCCCCTTTCTCTGGGAGGAAGGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGATGTGGAAAATGGCCCGGTGGAAGAACCAGAAGGAAAGAATTTAAGGGGCAGGTGCACACAGGCTaGTCCACGAGGCCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CRCGKWPGGRTRRKEFKGQVHTG*STRPPS Trigger: GGAAGGAGGCCTCGTGGAGCAGCCTGTGTGCACCTG...CCCCTTAAATTCTTTCCTTCTGGTTCTTCCACCGGGCCATTTTCCACATCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGACAGAAGCCTTCCTCCCAGAGAAAGGGGAGGCTGCTGTCACATGTCCACACTGTGTTCCTACTaGGCCAGTCAGGTGCACACA | + |
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Preference number: 2 (lower is better) Translates to: RQDRSLPPRERGGCCHMSTLCSY*ASQVHT Trigger: TGTGTGCACCTGACTGGCCCAGTAGGAACACAGTGT...GGACATGTGACAGCAGCCTCCCCTTTCTCTGGGAGGAAGGCTTCTGTCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR CCA 90 bp | TTACCCCGAGACCCATGGGGATATGATCAAGGAAGGAATCCTGCTGATGGCCACCCTGGGATCTCCATGTaGACCACGGTACAGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LPRDPWGYDQGRNPADGHPGISM*TTVQES Trigger: ACTCTCCTGTACCGTGGTCCACATGGAGATCCCAGG...GTGGCCATCAGCAGGATTCCTTCCTTGATCATATCCCCATGGGTCTCGGGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTCTACTGGGCACGCAGTATGGCCAGCAGGGCTATAAAGAGCTGAGCAGGCAGAAGGGAAGTCACTaGAGGGGGTTCTTCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: LFLLGTQYGQQGYKELSRQKGSH*RGFFLM Trigger: CATGAGGAAGAACCCCCTTCAGTGACTTCCCTTCTG...CCTGCTCAGCTCTTTATAGCCCTGCTGGCCATACTGCGTGCCCAGTAGAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR-3UTR GCA 90 bp | GTAGGGAAGGACAGGGAGAGCCCAGGAACACAATGGGCACTAAACCTCCTTCACGGAAGCTACAGGGACTaGTTTCTTCTGTGGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: VGKDRESPGTQWALNLLHGSYRD*FLLWTG Trigger: ACCAGTCCACAGAAGAAAGCAGTCCCTGTAGCTTCC...GTGAAGGAGGTTTAGTGCCCATTGTGTTCCTGGGCTCTCCCTGTCCTTCCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGACAGGGAGAGCCCAGGAACACAATGGGCACTAAACCTCCTTCACCCCCAAGGAAGCTACAGGGACTaGTTTCTTCTGTGGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: KDRESPGTQWALNLLHPQGSYRD*FLLWTG Trigger: ACCAGTCCACAGAAGAAAGCAGTCCCTGTAGCTTCC...TTGGGGGTGAAGGAGGTTTAGTGCCCATTGTGTTCCTGGGCTCTCCCTGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTTCTACTGGGCACGCAGTATGGCCAGCAGGGCTATAAAGAGCTGAGCAGGCAGTTCCCTGCTCAGTaGCCACGTCTCAGATCCATT | + |
|
Preference number: 2 (lower is better) Translates to: LFLLGTQYGQQGYKELSRQFPAQ*PRLRSI Trigger: AATGGATCTGAGACGTGGGCACTGAGCAGGGAACTG...CCTGCTCAGCTCTTTATAGCCCTGCTGGCCATACTGCGTGCCCAGTAGAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAGACAGAAGCCTTCCTCCCAGAGAAAGGGGAGGCTGCTGTCACATGTCCAGCCCAGGAACACAATaGGCACTAAACCTCCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RQDRSLPPRERGGCCHMSSPGTQ*ALNLLH Trigger: GTGAAGGAGGTTTAGTGCCCATTGTGTTCCTGGGCT...GGACATGTGACAGCAGCCTCCCCTTTCTCTGGGAGGAAGGCTTCTGTCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGTTACCAGAGCAGGAAACACTGCTAAGCACTGCAGGACCGAGTCAACAGCAGCTTCTGATGCAGATGTaGAAAATGGCCCGGTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PLPEQETLLSTAGPSQQQLLMQM*KMARWK Trigger: CTTCCACCGGGCCATTTTCCACATCTGCATCAGAAG...CTGCTGTTGACTCGGTCCTGCAGTGCTTAGCAGTGTTTCCTGCTCTGGTAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CAA 90 bp | CATGCTCAGCAGCTCCTGAATCCCCACCGAGAGAAGCCCTCGCCATaGCAGGTGGTTTCTTACACAGCAACAGATAACCTATACAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HAQQLLNPHREKPSP*QVVSYTATDNLYKP Trigger: TGGCTTGTATAGGTTATCTGTTGCTGTGTAAGAAACCACCTGCAATGGCGAGGGCTTCTCTCGGTGGGGATTCAGGAGCTGCTGAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR TCA 90 bp | CACAGCCATGTATATACCAGTACATCCAGCCTCTTGCTGTCACCCTTATACCTCATGCTCAGCAGCTCCTaGATCCCCACCGAGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HSHVYTSTSSLLLSPLYLMLSSS*IPTERS Trigger: GCTTCTCTCGGTGGGGATTCAGGAGCTGCTGAGCAT...GAGGTATAAGGGTGACAGCAAGAGGCTGGATGTACTGGTATATACATGGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCCATGTATATACCAGTACATCCAGCCTCTTGCTGTCACCCTTATACCTCAACACCGGAGCCGTGTaGATGAGCTGGGTGTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HSHVYTSTSSLLLSPLYLNTGAV*MSWVSG Trigger: TCCAGACACCCAGCTCATGCACACGGCTCCGGTGTT...GAGGTATAAGGGTGACAGCAAGAGGCTGGATGTACTGGTATATACATGGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGACTTGGGGCAAGTCTCAACAGGGCAGGAAGATTCTTGGGAAATGACCAGACATCTCCCATTATTTaGCACCCAGAGGGGACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PRLGASLNRAGRFLGNDQTSPII*HPEGTG Trigger: CCCTGTCCCCTCTGGGTGCCAAATAATGGGAGATGT...CTGGTCATTTCCCAAGAATCTTCCTGCCCTGTTGAGACTTGCCCCAAGTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACCCCGAGACCCATGGGGATATGATCAAGGAAGGAATCCTGCTGATGGCCACGCAGACTCCCCAAGATaGCAAGAAAAGGGAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: LPRDPWGYDQGRNPADGHADSPR*QEKGNS Trigger: ACTGTTTCCCTTTTCTTGCCATCTTGGGGAGTCTGC...GTGGCCATCAGCAGGATTCCTTCCTTGATCATATCCCCATGGGTCTCGGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR GCA 90 bp | CTATCACACCCAAGACAAGACAGAAGCCTTCCTCCCAGAGAAAGGGGAGGCTGCGATGTGATCAGACAGTaGACATCTCCCATTATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSHPRQDRSLPPRERGGCDVIRQ*TSPIIW Trigger: CCAAATAATGGGAGATGTGCACTGTCTGATCACATC...GCAGCCTCCCCTTTCTCTGGGAGGAAGGCTTCTGTCTTGTCTTGGGTGTGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGCCATGTATATACCAGTACATCCAGCCTCTTGCTGTCACCCTTATACCTCCATGAGCTGGGTGTCTaGACACTCAGTGGAACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: HSHVYTSTSSLLLSPLYLHELGV*TLSGTQ Trigger: TTGGGTTCCACTGAGTGTCCAGACACCCAGCTCATG...GAGGTATAAGGGTGACAGCAAGAGGCTGGATGTACTGGTATATACATGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR TCA 90 bp | GCATGGCGAATTAAAGGCACTGTAACTTTCTTCTACCTCCTCTGGGGTCAACCAGGGAGGCATCTCTTCTaGTGCAGATGTGGAAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: AWRIKGTVTFFYLLWGQPGRHLF*CRCGKW Trigger: CCATTTTCCACATCTGCATCAGAAGAGATGCCTCCC...TGGTTGACCCCAGAGGAGGTAGAAGAAAGTTACAGTGCCTTTAATTCGCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR CCA 90 bp | CACAGCCATGTATATACCAGTACATCCAGCCTCTTGCTGTCACCCTTATACCTCCCTCGCCATTGCAGGTaGTTTCTTACACAGCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: HSHVYTSTSSLLLSPLYLPRHCR*FLTQQQ Trigger: CTGTTGCTGTGTAAGAAACCACCTGCAATGGCGAGG...GAGGTATAAGGGTGACAGCAAGAGGCTGGATGTACTGGTATATACATGGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CAA 90 bp | CTTACACAGCAACAGATAACCTATACAAGCCAAAGGACAGAACTCTaGCTAGCTTCTCTACTCCTTTGCCCAGAGAAGGCAGTACCTATT | + |
|
Preference number: 2 (lower is better) Translates to: LTQQQITYTSQRTEL*LASLLLCPEKAVPI Trigger: AATAGGTACTGCCTTCTCTGGGCAAAGGAGTAGAGAAGCTAGCAAGAGTTCTGTCCTTTGGCTTGTATAGGTTATCTGTTGCTGTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR CCA 90 bp | GCATGGCGAATTAAAGGCACTGTAACTTTCTTCTACCTCCTCTGGGGTCAACCATATCAGATACTAACATaGGAGGCATCTCTTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: AWRIKGTVTFFYLLWGQPYQILT*EASLLM Trigger: CATCAGAAGAGATGCCTCCCATGTTAGTATCTGATA...TGGTTGACCCCAGAGGAGGTAGAAGAAAGTTACAGTGCCTTTAATTCGCCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | CTTCAGAGGCCCCTGATGTATTCTCAGGCAGACCGCTaGGAGCAGGCTGGACTCACCAGGTGCAGGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQRPLMYSQADR*EQAGLTRCRPR Trigger: CCTTGGCCTGCACCTGGTGAGTCCAGCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGGGGCCTCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR CCA 72 bp | GGGGGACAGGAGCTTCTCTGTACACTGTGTTCCTACTaGGCCAGTCAGGTGCACACAGGCTGCTCCACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGQELLCTLCSY*ASQVHTGCSTR Trigger: CCTCGTGGAGCAGCCTGTGTGCACCTGACTGGCCCAGTAGGAACACAGTGTACAGAGAAGCTCCTGTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR CCA 72 bp | CTTCAGAATAGGCTCGTCCCTGGAAGTGAGGGATCCTaGCAGAGGACCCAAGGCTGGAAGGCTCCTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQNRLVPGSEGS*QRTQGWKAPAP Trigger: TGGGGCAGGAGCCTTCCAGCCTTGGGTCCTCTGCCAGGATCCCTCACTTCCAGGGACGAGCCTATTCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | CAGAGGTGCAGGAGGTACAGGACTGTGCTCCAGAGCTaGGGACAAATGTCCCCCACATCCAGCGCTCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: QRCRRYRTVLQS*GQMSPTSSAPP Trigger: TGGTGGAGCGCTGGATGTGGGGGACATTTGTCCTCAGCTCTGGAGCACAGTCCTGTACCTCCTGCACCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR TCA 72 bp | CCCGATACATGGCTGCCAACACCGGAGCCGTGTGCATaGGCTGGGTGTCTGGACACTCAGTGGAACCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: PDTWLPTPEPCA*AGCLDTQWNPT Trigger: AGTTGGGTTCCACTGAGTGTCCAGACACCCAGCTCATGCACACGGCTCCGGTGTTGGCAGCCATGTATCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | GGACTCACCAGGTGCAGGCCAAGGTGTTGGCACTTCTaGTCTAAAAGCAGACAGAGCCACGGGTGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLTRCRPRCWHF*SKSRQSHGCAR Trigger: CCTGGCACACCCGTGGCTCTGTCTGCTTTTAGAGCAGAAGTGCCAACACCTTGGCCTGCACCTGGTGAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR GCA 72 bp | CCATTCCGGGCTGTGGTCCAGGAGGAAGCCGCTCTGTaGAGACCGCTGTTCAGTGAGGAAGCAGATGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PFRAVVQEEAAL*RPLFSEEADAL Trigger: AAGAGCATCTGCTTCCTCACTGAACAGCGGTCTGCACAGAGCGGCTTCCTCCTGGACCACAGCCCGGAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | CTCTGCATGCTGAGCTGGCCTGGCTCACAGAGACGCTaGTTCTGGGTGGGAGACCTTGACCAATGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCMLSWPGSQRR*FWVGDLDQCTD Trigger: GTCAGTGCATTGGTCAAGGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCATGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | GAGCAGGCTGGACTCACCAGGTGCAGGCCAAGGTGTTaGCACTTCTGCTCTAAAAGCAGACAGAGCCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: EQAGLTRCRPRC*HFCSKSRQSHG Trigger: CCCGTGGCTCTGTCTGCTTTTAGAGCAGAAGTGCCAACACCTTGGCCTGCACCTGGTGAGTCCAGCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGACAAGCAGAGGTGCTGCTaGGAGACTGCCCTAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EAAVTCPRNAAEVQEVQDKQRCC*ETALDL Trigger: CAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGCTT...GTCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR TCA 72 bp | CCAGGAGGTGATTTGTTCGTTTGCTCCTCTGCATGCTaGGCTGGCCTGGCTCACAGAGACGCTGCTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGGDLFVCSSAC*AGLAHRDAASG Trigger: CCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCATGCAGAGGAGCAAACGAACAAATCACCTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | CAGAGACGCTGCTTCTGGGTGGGAGACCTTGACCAATaGACTGACTCACCTGGCACCTGGCTTCCACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QRRCFWVGDLDQ*TDSPGTWLPHH Trigger: ATGGTGTGGAAGCCAGGTGCCAGGTGAGTCAGTGCATTGGTCAAGGTCTCCCACCCAGAAGCAGCGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | CCTGATGTATTCTCAGGCAGACCGCTGAGAGCAGGCTaGACTCACCAGGTGCAGGCCAAGGTGTTGGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: PDVFSGRPLRAG*THQVQAKVLAL Trigger: AAGTGCCAACACCTTGGCCTGCACCTGGTGAGTCCAGCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR CCA 72 bp | CTGTGTGTCGGAAGCCTCTCTCCTGGGATCTCCATGTaGACCACGGTACAGGAGAGTGGGATATGGGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCVGSLSPGISM*TTVQESGIWGS Trigger: ACTCCCCCATATCCCACTCTCCTGTACCGTGGTCCACATGGAGATCCCAGGAGAGAGGCTTCCGACACACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | ATGCTGAGCTGGCCTGGCTCACAGAGACGCTGCTTCTaGGTGGGAGACCTTGACCAATGCACTGACTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: MLSWPGSQRRCF*VGDLDQCTDSP Trigger: AGGTGAGTCAGTGCATTGGTCAAGGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | TGCCAACACCGGAGCCGTGTGCATGAGCTGGGTGTCTaGACACTCAGTGGAACCCAACTCAACTGGGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CQHRSRVHELGV*TLSGTQLNWEG Trigger: ACCTTCCCAGTTGAGTTGGGTTCCACTGAGTGTCCAGACACCCAGCTCATGCACACGGCTCCGGTGTTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | TATAGAGGCAAGAACGGGCGTTCTGTGCTGGATTCATaGGAGTCTGGGTCTGAAGCCCTGGCAGGGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: YRGKNGRSVLDS*ESGSEALAGAQ Trigger: CTGTGCCCCTGCCAGGGCTTCAGACCCAGACTCCCATGAATCCAGCACAGAACGCCCGTTCTTGCCTCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | GAAGGGGGTATAGAGGCAAGAACGGGCGTTCTGTGCTaGATTCATGGGAGTCTGGGTCTGAAGCCCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EGGIEARTGVLC*IHGSLGLKPWQ Trigger: CTGCCAGGGCTTCAGACCCAGACTCCCATGAATCCAGCACAGAACGCCCGTTCTTGCCTCTATACCCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGACAGGGCAGGAAGATTCTaGGGAAATGACCAGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EAAVTCPRNAAEVQEVQDRAGRF*GNDQGS Trigger: GCTTCCCTGGTCATTTCCCAAGAATCTTCCTGCCCT...GTCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGACTGTGAAGCAGAGGTGCTGCTaGGAGACTGCCCTAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSHVPGMQQRCRRYRTVKQRCC*ETALDL Trigger: CAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGCTT...CACAGTCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR TCA 72 bp | CCAGGAGGAAGCCGCTCTGTGCAGACCGCTGTTCAGTaGGGAAGCAGATGCTCTTCTCACAACCTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PGGSRSVQTAVQ*GSRCSSHNLLT Trigger: AGTGAGGAGGTTGTGAGAAGAGCATCTGCTTCCTCACTGAACAGCGGTCTGCACAGAGCGGCTTCCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | CCTGATTGCTTTACTGTCTCCCCTCAGGAGGATGGATaGATGAGCCTGTGTGTCGGAAGCCTCTCTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PDCFTVSPQEDG*MSLCVGSLSPG Trigger: CCCAGGAGAGAGGCTTCCGACACACAGGCTCATCCATCCATCCTCCTGAGGGGAGACAGTAAAGCAATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | ATTTGTTCGTTTGCTCCTCTGCATGCTGAGCTGGCCTaGCTCACAGAGACGCTGCTTCTGGGTGGGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: ICSFAPLHAELA*LTETLLLGGRP Trigger: AGGTCTCCCACCCAGAAGCAGCGTCTCTGTGAGCCAGGCCAGCTCAGCATGCAGAGGAGCAAACGAACAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | AGCACACCAATCCCAACAAGAGCTTCCACCGAAGGATaGCGAGACCAGCTAGCAGGAAGCAGCAGACATCCC | + |
|
Preference number: 3 (lower is better) Translates to: STPIPTRASTEG*RDQLAGSSRHP Trigger: GGGATGTCTGCTGCTTCCTGCTAGCTGGTCTCGCCATCCTTCGGTGGAAGCTCTTGTTGGGATTGGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | GAATCCCCAAGCATTGGAGACCCCCAAGCTTATTCCTaGGACAGCGACCGTCACAGAGGGTTACACTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: ESPSIGDPQAYS*DSDRHRGLHSE Trigger: CTCGGAGTGTAACCCTCTGTGACGGTCGCTGTCTCAGGAATAAGCTTGGGGGTCTCCAATGCTTGGGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | AGAGTCCATAGGAGGCTCCGCCAGCTTGAAGAACTATaGGCCTTGCTCCCAGGTACGAACAAGGTCCCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RVHRRLRQLEEL*ALLPGTNKVPN Trigger: GTTCGGGACCTTGTTCGTACCTGGGAGCAAGGCTCATAGTTCTTCAAGCTGGCGGAGCCTCCTATGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | AGAACAGGAGGGCTGAGAGCTCAGAAGGGAAGTCACTaGAGGGGGTTCTTCCTCATGAAGGCTGTTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RTGGLRAQKGSH*RGFFLMKAVVP Trigger: GGGGACAACAGCCTTCATGAGGAAGAACCCCCTTCAGTGACTTCCCTTCTGAGCTCTCAGCCCTCCTGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | TACATGAAGACAGTGGTGCCTTCCTTCTCGAGGGAGTaGAAGGGCTATGGCACAACCCCCTCAAGCCGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YMKTVVPSFSRE*KGYGTTPSSRQ Trigger: TTGGCGGCTTGAGGGGGTTGTGCCATAGCCCTTTCACTCCCTCGAGAAGGAAGGCACCACTGTCTTCATGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | GCGAGAGACCTGGGAGGAATACACTGTCTTAGCCTGTaGTGCTCTCTCAGCAGCCAAGCACAAAGCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: ARDLGGIHCLSL*CSLSSQAQSRS Trigger: GGATCTGCTTTGTGCTTGGCTGCTGAGAGAGCAGCACAGGCTAAGACAGTGTATTCCTCCCAGGTCTCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | ACTCCCCAAGATGGCAAGAAAAGGGAAACAGTTCCCTaGTCAGTGCCCACGTCTCAGATCCATTCCGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TPQDGKKRETVP*SVPTSQIHSGL Trigger: CAGCCCGGAATGGATCTGAGACGTGGGCACTGAGCAGGGAACTGTTTCCCTTTTCTTGCCATCTTGGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | GAGGGAAGAGGAGGTGCACAAGCAGACTCCCCAAGATaGCAAGAAAAGGGAAACAGTTCCCTGCTCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGRGGAQADSPR*QEKGNSSLLSA Trigger: GGCACTGAGCAGGGAACTGTTTCCCTTTTCTTGCCATCTTGGGGAGTCTGCTTGTGCACCTCCTCTTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | GGAGACCTTGACCAATGCACTGACTCACCTGGCACCTaGCTTCCACACCATCACCAGAAGGGAAAGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GDLDQCTDSPGT*LPHHHQKGKGT Trigger: AGTTCCCTTTCCCTTCTGGTGATGGTGTGGAAGCCAGGTGCCAGGTGAGTCAGTGCATTGGTCAAGGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | CTGTGCTGGATTCATGGGAGTCTGGGTCTGAAGCCCTaGCAGGGGCACAGCCATGTATATACCAGTACATCC | + |
|
Preference number: 3 (lower is better) Translates to: LCWIHGSLGLKP*QGHSHVYTSTS Trigger: GGATGTACTGGTATATACATGGCTGTGCCCCTGCCAGGGCTTCAGACCCAGACTCCCATGAATCCAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | ATTGCTTTACTGTCTCCCCTCAGGAGGATGGATGGATaGGCCTGTGTGTCGGAAGCCTCTCTCCTGGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: IALLSPLRRMDG*ACVSEASLLGS Trigger: AGATCCCAGGAGAGAGGCTTCCGACACACAGGCTCATCCATCCATCCTCCTGAGGGGAGACAGTAAAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | GGCATCCAATACAACCAGAAACTCCCAGGGCACCCCTaGTTGCTTTACTGTCTCCCCTCAGGAGGATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GIQYNQKLPGHP*LLYCLPSGGWM Trigger: CATCCATCCTCCTGAGGGGAGACAGTAAAGCAATCAGGGGTGCCCTGGGAGTTTCTGGTTGTATTGGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | ACCTTAACTGGGCAGAGGGCAGGAGACGGGAAGATGTaGTCAGACAGTGCACATCTCCCATTATTTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TLTGQRAGDGKM*SDSAHLPLFGT Trigger: GGTGCCAAATAATGGGAGATGTGCACTGTCTGATCACATCTTCCCGTCTCCTGCCCTCTGCCCAGTTAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR TCA 72 bp | CTCAGAAGGGAAGTCACTGAAGGGGGTTCTTCCTCATaGAGGCTGTTGTCCCCACAACCGAGAACAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LRREVTEGGSSS*RLLSPQPRTDG Trigger: ACCATCTGTTCTCGGTTGTGGGGACAACAGCCTTCATGAGGAAGAACCCCCTTCAGTGACTTCCCTTCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | GAGAAGGCAGTACCTATTTCAGCAGAACAGGAGGGCTaGGAGCTCAGAAGGGAAGTCACTGAAGGGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EKAVPISAEQEG*ELRREVTEGGS Trigger: AGAACCCCCTTCAGTGACTTCCCTTCTGAGCTCTCAGCCCTCCTGTTCTGCTGAAATAGGTACTGCCTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | ATGAGAGCGGCCCACACCCAGACTACCTGTATCTTCTaGGAGCCTATGCTAAAGTCTCCATGCTCAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MRAAHTQTTCIF*EPMLKSPCSAA Trigger: AGCTGCTGAGCATGGAGACTTTAGCATAGGCTCTCAGAAGATACAGGTAGTCTGGGTGTGGGCCGCTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | GCAGTTGAGGGTGTAGATCTGGGAATCTTCACTTCCTaGCGCCTCTCCCTAGGACAAGCAGATAGAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AVEGVDLGIFTS*RLSLGQADRSL Trigger: CAGACTTCTATCTGCTTGTCCTAGGGAGAGGCGGCAGGAAGTGAAGATTCCCAGATCTACACCCTCAACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | GGCAAGTCTCAACAGGGCAGGAAGATTCTTGGGAAATaGCCAGGGAAGCTACAGGGACTGCTTTCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GKSQQGRKILGK*PGKLQGLLSSV Trigger: CACAGAAGAAAGCAGTCCCTGTAGCTTCCCTGGTCATTTCCCAAGAATCTTCCTGCCCTGTTGAGACTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR TCA 72 bp | CAGGTAACACTCCAAAGAATACTAGCACATGTCCACTaGCTGAGGGAAGAGGAGGTGCACAAGCAGACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QVTLQRILAHVH*LREEEVHKQTP Trigger: GGGAGTCTGCTTGTGCACCTCCTCTTCCCTCAGTCAGTGGACATGTGCTAGTATTCTTTGGAGTGTTACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | GAACCATGCCCCACTCCAAGTTCAGACAGAACCTTCTaGCCTAAGAAATGGTCTTCCCCCACTACATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPCPTPSSDRTF*PKKWSSPTTWE Trigger: TTCCCATGTAGTGGGGGAAGACCATTTCTTAGGGCAGAAGGTTCTGTCTGAACTTGGAGTGGGGCATGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | AATGACCAGGGAAGCTACAGGGACTGCTTTCTTCTGTaGACTGGTCAGCTCCACAGAATAATCCAAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NDQGSYRDCFLL*TGQLHRIIQGL Trigger: AAGCCCTTGGATTATTCTGTGGAGCTGACCAGTCCACAGAAGAAAGCAGTCCCTGTAGCTTCCCTGGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
||
| 3UTR TCA 72 bp | GCTGATTTCTTGTCTTGTGCAATTATCTCACACTGCTaGTTTACGGAGGTCAAAGACCAGGTAGTGGCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ADFLSCAIISHC*FTEVKDQVVAA Trigger: GGCCGCCACTACCTGGTCTTTGACCTCCGTAAATCAGCAGTGTGAGATAATTGCACAAGACAAGAAATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR GCA 72 bp | AATTCGTGGCTAAAGGCAAACAGAAGTGGTAAGCAATaGTTAAAGCGGCCGCCTCAGAGACCTGCAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NSWLKANRSGKQ*LKRPPQRPAKQ Trigger: TTGCTTTGCAGGTCTCTGAGGCGGCCGCTTTAAGCATTGCTTACCACTTCTGTTTGCCTTTAGCCACGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | TGTCACCCTTATACCTCACAAATGTCAACCAGAATCTaGATCTGCTGGGAAGTATCTCAGCGCAGTAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CHPYTSQMSTRI*ICWEVSQRSRS Trigger: AGACCTACTGCGCTGAGATACTTCCCAGCAGATGCAGATTCTGGTTGACATTTGTGAGGTATAAGGGTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | ATACTAACATGGGAGGCATCTCTTCTGATGCAGATGTaGAAAATGGCCCGGTGGAAGAACCAGAAGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILTWEASLLMQM*KMARWKNQKER Trigger: TCTTTCCTTCTGGTTCTTCCACCGGGCCATTTTCCACATCTGCATCAGAAGAGATGCCTCCCATGTTAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | CTCCCCAGAATGCCCCCAGTTCCTTTAGTCAATTCGTaGCTAAAGGCAAACAGAAGTGGTAAGCAATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPRMPPVPLVNS*LKANRSGKQCL Trigger: TAAGCATTGCTTACCACTTCTGTTTGCCTTTAGCCACGAATTGACTAAAGGAACTGGGGGCATTCTGGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CCA 72 bp | ACCTCCCTCATCTCCTCTTTTCCTCCTTTTAGGGCATaGCGAATTAAAGGCACTGTAACTTTCTTCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSLISSFPPFRA*RIKGTVTFFYL Trigger: GAGGTAGAAGAAAGTTACAGTGCCTTTAATTCGCCATGCCCTAAAAGGAGGAAAAGAGGAGATGAGGGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR GCA 72 bp | CCTTATACCTCACAAATGTCAACCAGAATCTGCATCTaGTGGGAAGTATCTCAGCGCAGTAGGTCTTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PYTSQMSTRICI*WEVSQRSRSFS Trigger: AGAAAAAGACCTACTGCGCTGAGATACTTCCCAGCAGATGCAGATTCTGGTTGACATTTGTGAGGTATAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | AAATGGCTCATGTACAAAGATGCTGTCATTGGAAGCTaGTTTCTTGTCTTGTGCAATTATCTCACACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KWLMYKDAVIGS*FLVLCNYLTLL Trigger: CAGCAGTGTGAGATAATTGCACAAGACAAGAAATCAGCTTCCAATGACAGCATCTTTGTACATGAGCCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR TCA 72 bp | TCAAGGTCTTTATTTAACTGTAACAGCAACCGTTGGTaGGGATTTATTTCCCTAGTTCCAAACACCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRSLFNCNSNRW*GFISLVPNTCL Trigger: CAAGCAGGTGTTTGGAACTAGGGAAATAAATCCTCACCAACGGTTGCTGTTACAGTTAAATAAAGACCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CCA 72 bp | AAGACCTGCCTAAAGGAAAGCTATAATTTCACACGGTaGGGAAGGTATTTTGATTGGTTAACTGGAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KTCLKESYNFTR*GRYFDWLTGKL Trigger: CAGTTTTCCAGTTAACCAATCAAAATACCTTCCCCACCGTGTGAAATTATAGCTTTCCTTTAGGCAGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| CDS-3UTR CCA 90 bp | GGAGGCTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGACTCTGGCTGGGCTGGTaGCTACCACCGGCCGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGCCHMSQECSRGAGGTGLWLGW*LPPADA Trigger: CGCGTCGGCCGGTGGTAGCCACCAGCCCAGCCAGAG...TCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR CCA 90 bp | CAGTCCTCTTCAGAGGCCCCTGATGTATTCTCAGGCAGACCGCTGAGAGCAGGCCGGCTCTGGCTGGGCTaGTGGCTACCACCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSEAPDVFSGRPLRAGRLWLG*WLPPAD Trigger: GTCGGCCGGTGGTAGCCACCAGCCCAGCCAGAGCCG...GCCTGCTCTCAGCGGTCTGCCTGAGAATACATCAGGGGCCTCTGAAGAGGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR CCA 90 bp | GAGCAGGCTGGACTCACCAGGTGCAGGCCAAGGTGTTGGCACTTCTGCTCTAAACTCTGGCTGGGCTGGTaGCTACCACCGGCCGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: EQAGLTRCRPRCWHFCSKLWLGW*LPPADA Trigger: CGCGTCGGCCGGTGGTAGCCACCAGCCCAGCCAGAG...TTTAGAGCAGAAGTGCCAACACCTTGGCCTGCACCTGGTGAGTCCAGCCTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGAGTGGGGTCTGCGCCATaGGAGAATTGCGACGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCCHMSQECSRGAGGTGVGSAP*ENCDGP Trigger: TGGACCGTCGCAATTCTCCCATGGCGCAGACCCCAC...TCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR CCA 90 bp | GCATGGCGAATTAAAGGCACTGTAACTTTCTTCTACCTCCTCTGGGGTCAACCACGGCTCTGGCTGGGCTaGTGGCTACCACCGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AWRIKGTVTFFYLLWGQPRLWLG*WLPPAD Trigger: GTCGGCCGGTGGTAGCCACCAGCCCAGCCAGAGCCG...TGGTTGACCCCAGAGGAGGTAGAAGAAAGTTACAGTGCCTTTAATTCGCCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| CDS-3UTR GCA 90 bp | GCAGAGGTGCTGCTTGGAGACTGCCCTAGACTTGGGGCAAGTCTCAACAGGGCAAGCCTCATCCCCAACTaGATGCTTCCTGTCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: AEVLLGDCPRLGASLNRASLIPN*MLPVMI Trigger: AATCATGACAGGAAGCATGCAGTTGGGGATGAGGCT...TGCCCTGTTGAGACTTGCCCCAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CAA 72 bp | TACAAGCAGAGGTGCTGCTTGGAGACTGCCCTAGACTaGGGGCAAGTCTCAACAGGGCAGGAAGATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YKQRCCLETALD*GQVSTGQEDSW Trigger: CCAAGAATCTTCCTGCCCTGTTGAGACTTGCCCCAAGTCTAGGGCAGTCTCCAAGCAGCACCTCTGCTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGACAGGGAGAGCCCAGGAACACAATGGGCACTAAACCTCCTTCACCCAGCCTCATCCCCAACTaGATGCTTCCTGTCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: REGQGEPRNTMGTKPPSPSLIPN*MLPVMI Trigger: AATCATGACAGGAAGCATGCAGTTGGGGATGAGGCT...GGGTGAAGGAGGTTTAGTGCCCATTGTGTTCCTGGGCTCTCCCTGTCCTTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CAA 72 bp | CAGCTCCTGAATCCCCACCGAGAGAAGCCCTCGCCATaGCAGGTGGTTTCTTACACAGCAACAGATAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: QLLNPHREKPSP*QVVSYTATDNL Trigger: TAGGTTATCTGTTGCTGTGTAAGAAACCACCTGCAATGGCGAGGGCTTCTCTCGGTGGGGATTCAGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CAA 72 bp | AGACTTGGGGCAAGTCTCAACAGGGCAGGAAGATTCTaGGGAAATGACCAGGGAAGCTACAGGGACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGASLNRAGRF*GNDQGSYRDCF Trigger: AAAGCAGTCCCTGTAGCTTCCCTGGTCATTTCCCAAGAATCTTCCTGCCCTGTTGAGACTTGCCCCAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| 3UTR CAA 72 bp | GGGCACAGCCATGTATATACCAGTACATCCAGCCTCTaGCTGTCACCCTTATACCTCACAAATGTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHSHVYTSTSSL*LSPLYLTNVNQ Trigger: CTGGTTGACATTTGTGAGGTATAAGGGTGACAGCAAGAGGCTGGATGTACTGGTATATACATGGCTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
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| 3UTR CAA 72 bp | CAACAGATAACCTATACAAGCCAAAGGACAGAACTCTaGCTAGCTTCTCTACTCCTTTGCCCAGAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQITYTSQRTEL*LASLLLCPEKA Trigger: TGCCTTCTCTGGGCAAAGGAGTAGAGAAGCTAGCAAGAGTTCTGTCCTTTGGCTTGTATAGGTTATCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CAA 72 bp | CCGTGGGCATGGAGTCCAGAAAACACATCAAAGAACTaGAACTACATACATGAAGACAGTGGTGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWAWSPENTSKN*NYIHEDSGAFL Trigger: AAGGAAGGCACCACTGTCTTCATGTATGTAGTTCAAGTTCTTTGATGTGTTTTCTGGACTCCATGCCCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| 3UTR CAA 72 bp | CTACTAGAAAATGGCTCATGTACAAAGATGCTGTCATaGGAAGCTGATTTCTTGTCTTGTGCAATTATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLENGSCTKMLS*EADFLSCAIIS Trigger: TGAGATAATTGCACAAGACAAGAAATCAGCTTCCAATGACAGCATCTTTGTACATGAGCCATTTTCTAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020288.15 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTCACATGTCCCAGGAATGCAGCAGAGGTGCAGGAGGTACAGGACTGTGTTCAGGTTGTTTAAGTaGTTCACTTCTACTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSHVPGMQQRCRRYRTVFRLFK*FTSTLE Trigger: CTCCAAAGTAGAAGTGAACAACTTAAACAACCTGAA...CACAGTCCTGTACCTCCTGCACCTCTGCTGCATTCCTGGGACATGTGACAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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| CDS-3UTR CAA 90 bp | ATGGGCACTAAACCTCCTTCACCCCCAACCCCTACAAGCAGAGGTGCTGCTTGGTTCAGGTTGTTTAAGTaGTTCACTTCTACTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MGTKPPSPPTPTSRGAAWFRLFK*FTSTLE Trigger: CTCCAAAGTAGAAGTGAACAACTTAAACAACCTGAA...CCAAGCAGCACCTCTGCTTGTAGGGGTTGGGGGTGAAGGAGGTTTAGTGCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020288.15 ENSMUST00000167087.2 |
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