Pregenerated sensors for EIF4E3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093661Ensembl transcript IDs: ENSMUST00000032151.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCGTGGAGGGACTTAAGGTTGGGAAAGAAGCGCCTCTTACGCTCTaGCCACTAATTAATTTGGCTTCCTGTTTAGCAATGCAAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TVEGLKVGKEAPLTL*PLINLASCLAMQVE Trigger: CTCCACTTGCATTGCTAAACAGGAAGCCAAATTAATTAGTGGTCAGAGCGTAAGAGGCGCTTCTTTCCCAACCTTAAGTCCCTCCACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 90 bp | TTAACAAAAGATGTGAGAATTGGTTTGGGTAAACATGCTGCAACATaGAAGAAGCTCTACTCCCCACAATTAATACACATCGCCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: LTKDVRIGLGKHAAT*KKLYSPQLIHIASS Trigger: AGAGGAGGCGATGTGTATTAATTGTGGGGAGTAGAGCTTCTTCCATGTTGCAGCATGTTTACCCAAACCAATTCTCACATCTTTTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGGCGAAACCCACTCTAAATaGACCAGCATCGGGCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: QEGHRFSERTRDRGRKAGETHSK*TSIGLR Trigger: CCGAAGCCCGATGCTGGTCCATTTAGAGTGGGTTTC...GCCGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGGCACACAAAAGAAACAATaGCCAGCTCACAATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: QEGHRFSERTRDRGRKAGTQKKQ*PAHNMQ Trigger: CTGCATATTGTGAGCTGGGCATTGTTTCTTTTGTGT...GCCGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGGGAAGTGTCACAACAATTTATCAGAAAAAGGGTTTTGCTAGGCTAGGCCCCCACCTGCCACTTTaGGTCCTAATGGCCCGGTTT | + |
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Preference number: 2 (lower is better) Translates to: MQGSVTTIYQKKGFARLGPHLPL*VLMARF Trigger: AAACCGGGCCATTAGGACTCAAAGTGGCAGGTGGGG...GCCTAGCCTAGCAAAACCCTTTTTCTGATAAATTGTTGTGACACTTCCCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCTGGGAGGCTCTGAAAGGTTTTCTTCTACTGAAGGCAGTATTTCTTTGCCTAATGGCCCGGTTTaGAAGGACAGAAACCCACTC | + |
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Preference number: 2 (lower is better) Translates to: EELGGSERFSSTEGSISLPNGPV*KDRNPL Trigger: GAGTGGGTTTCTGTCCTTGCAAACCGGGCCATTAGG...CAAAGAAATACTGCCTTCAGTAGAAGAAAACCTTTCAGAGCCTCCCAGCTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCTCCTCCTGGTGCCCTGTGGCTTCACAGGCAGTCCTGTGGCGGCTATGTTCACCCCACCTGCCACTTaGAGTCCTAATGGCCCGGTT | + |
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Preference number: 3 (lower is better) Translates to: GLLLVPCGFTGSPVAAMFTPPAT*SPNGPV Trigger: AACCGGGCCATTAGGACTCAAAGTGGCAGGTGGGGT...GAACATAGCCGCCACAGGACTGCCTGTGAAGCCACAGGGCACCAGGAGGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 72 bp | ACAGGAATGAGATGCACTCAAGGGCAGCTGTGTGAGTaGCTAGGTGCTTCCTGTAAGTGCACAGATGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TGMRCTQGQLCE*LGASCKCTDEG Trigger: CCCCTCATCTGTGCACTTACAGGAAGCACCTAGCCACTCACACAGCTGCCCTTGAGTGCATCTCATTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 72 bp | AAATTCGCCCTTTTGAGAAGAACAGAAGCTGCACACTaGCCCATGGATCTGACCCAAGCCCGCAGGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: KFALLRRTEAAH*PMDLTQARRGE Trigger: TTCTCCCCTGCGGGCTTGGGTCAGATCCATGGGCCAGTGTGCAGCTTCTGTTCTTCTCAAAAGGGCGAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 72 bp | AAGATGAGAGGGAACCGGGGAACATCTGGGAGGAGCTaGGAGGCTCTGAAAGGTTTTCTTCTACTGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KMRGNRGTSGRS*EALKGFLLLKA Trigger: TGCCTTCAGTAGAAGAAAACCTTTCAGAGCCTCCCAGCTCCTCCCAGATGTTCCCCGGTTCCCTCTCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR-3UTR CAA 90 bp | TGCAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGTCTCAGGACAAATCATaGGGTCTTTTGTTGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: CRKAIGFQKGHVTGAGKPSQDKS*GLLLKG Trigger: CCCTTTCAACAAAAGACCCAATGATTTGTCCTGAGA...CGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR GCA 72 bp | ATCCAATATCGAATAACACAGTCCACAGGAATGAGATaGACTCAAGGGCAGCTGTGTGAGTGGCTAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: IQYRITQSTGMR*TQGQLCEWLGA Trigger: AGCACCTAGCCACTCACACAGCTGCCCTTGAGTGCATCTCATTCCTGTGGACTGTGTTATTCGATATTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 72 bp | TTCTCTCACTCTTTCTCTTTAAAGCAAGTGATACGATaGCAGAAACCCGCACCTTCTTCCCCAACCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: FSHSFSLKQVIR*QKPAPSSPTPP Trigger: AGGTGGGGTTGGGGAAGAAGGTGCGGGTTTCTGCCATCGTATCACTTGCTTTAAAGAGAAAGAGTGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR TCA 72 bp | TTTGGCTTCCTGTTTAGCAATGCAAGTGGAGGCCCCTaGCTTTTTATAAACAGATGCTACCGAGAGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: FGFLFSNASGGP*LFINRCYREPS Trigger: AGATGGCTCTCGGTAGCATCTGTTTATAAAAAGTCAGGGGCCTCCACTTGCATTGCTAAACAGGAAGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR TCA 72 bp | GGACTTAAGGTTGGGAAAGAAGCGCCTCTTACGCTCTaGCCACTAATTAATTTGGCTTCCTGTTTAGCAATG | + |
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Preference number: 3 (lower is better) Translates to: GLKVGKEAPLTL*PLINLASCLAM Trigger: CATTGCTAAACAGGAAGCCAAATTAATTAGTGGTCAGAGCGTAAGAGGCGCTTCTTTCCCAACCTTAAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CCA 72 bp | GATGTGAGAATTGGTTTGGGTAAACATGCTGCAACATaGAAGAAGCTCTACTCCCCACAATTAATACACATC | + |
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Preference number: 3 (lower is better) Translates to: DVRIGLGKHAAT*KKLYSPQLIHI Trigger: GATGTGTATTAATTGTGGGGAGTAGAGCTTCTTCCATGTTGCAGCATGTTTACCCAAACCAATTCTCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR GCA 72 bp | CACACACACAAAAGAAACAATGCCCAGCTCACAATATaGAGGGAAGTGTCACAACAATTTATCAGAAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: HTHKRNNAQLTI*REVSQQFIRKR Trigger: CCTTTTTCTGATAAATTGTTGTGACACTTCCCTGCATATTGTGAGCTGGGCATTGTTTCTTTTGTGTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | GGCCTCCTCCTGGTGCCCTGTGGCTTCACAGGCAGTCCTGTGGCGGCTATGTTCTGGGGCAGGAGCTGGTaGATCTTCTCTAGCACAGTC | + |
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Preference number: 4 (lower is better) Translates to: GLLLVPCGFTGSPVAAMFWGRSW*IFSSTV Trigger: GACTGTGCTAGAGAAGATCCACCAGCTCCTGCCCCA...GAACATAGCCGCCACAGGACTGCCTGTGAAGCCACAGGGCACCAGGAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | GGCCTCCTCCTGGTGCCCTGTGGCTTCACAGGCAGTCCTGTGGCGGCTATGTTCGCTTTAAAAGCTATGTaGGGCAGGAGCTGGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: GLLLVPCGFTGSPVAAMFALKAM*GRSWWI Trigger: GATCCACCAGCTCCTGCCCCACATAGCTTTTAAAGC...GAACATAGCCGCCACAGGACTGCCTGTGAAGCCACAGGGCACCAGGAGGAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | TGCAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGCACACTCGGCTGCTGTaGCACCAGGGAGTGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: CRKAIGFQKGHVTGAGKPHTRLL*HQGVIC Trigger: ACAGATCACTCCCTGGTGCCACAGCAGCCGAGTGTG...CGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGGCATGTGGGGCAGGAGCTaGTGGATCTTCTCTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: QEGHRFSERTRDRGRKAGMWGRS*WIFSST Trigger: TGTGCTAGAGAAGATCCACCAGCTCCTGCCCCACAT...GCCGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGGCGATCTCGTCATCTGCTaGAGCACAGTCTGTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: QEGHRFSERTRDRGRKAGDLVIC*STVCEL Trigger: CAGTTCACAGACTGTGCTGCAGCAGATGACGAGATC...GCCGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR TCA 90 bp | TGCAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGCCACCTTCAAAAGCATaGTGCTCTTCATGGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CRKAIGFQKGHVTGAGKPPPSKA*CSSWGL Trigger: TAAACCCCATGAAGAGCATCATGCTTTTGAAGGTGG...CGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | TGCAGGAAGGCCATCGGTTTTCAGAAAGGACACGTGACAGGGGCAGGAAAGCCGATTCTTTCCAAACTGTaGACGTGCTGTCCTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CRKAIGFQKGHVTGAGKPILSKL*TCCPWE Trigger: TTCCCAAGGACAGCACGTCCACAGTTTGGAAAGAAT...CGGCTTTCCTGCCCCTGTCACGTGTCCTTTCTGAAAACCGATGGCCTTCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR TCA 90 bp | ATGCAGGGAAGTGTCACAACAATTTATCAGAAAAAGGGTTTTGCTAGGCTAGGCTGTGGCACCAGGGAGTaGTCTGTCCAGCCAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: MQGSVTTIYQKKGFARLGCGTRE*SVQPEG Trigger: ACCTTCTGGCTGGACAGATCACTCCCTGGTGCCACA...GCCTAGCCTAGCAAAACCCTTTTTCTGATAAATTGTTGTGACACTTCCCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | ACAAGGTACAGTAGAGTCACTGAAGGGGAAACCCAACTCTTATGCCTCAATGAACTCCTCCTCCCAAAGTaGTCGCCTCTCTCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TRYSRVTEGETQLLCLNELLLPK*SPLSSH Trigger: ATGAGAGGAGAGAGGCGACCACTTTGGGAGGAGGAG...TTCATTGAGGCATAAGAGTTGGGTTTCCCCTTCAGTGACTCTACTGTACCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CCA 90 bp | ATGCAGGGAAGTGTCACAACAATTTATCAGAAAAAGGGTTTTGCTAGGCTAGGCTGGACGTGCTGTCCTTaGGAACTTTCATCTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: MQGSVTTIYQKKGFARLGWTCCP*ELSSST Trigger: TGTGGAAGATGAAAGTTCCCAAGGACAGCACGTCCA...GCCTAGCCTAGCAAAACCCTTTTTCTGATAAATTGTTGTGACACTTCCCTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| 3UTR CAA 72 bp | AACAAGTTTAGAAACTGTTCAGAGAAATGCACGTCATaGAGACAAGAAGGATCCGAGCCCCTCATGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NKFRNCSEKCTS*RQEGSEPLMSE Trigger: TTCACTCATGAGGGGCTCGGATCCTTCTTGTCTCAATGACGTGCATTTCTCTGAACAGTTTCTAAACTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR GCA 90 bp | ATGCAGGGAAGTGTCACAACAATTTATCAGAAAAAGGGTTTTGCTAGGCTAGGCGGGTTTATAAAACACTaGTTTAAAAGCTATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MQGSVTTIYQKKGFARLGGFIKH*FKSYVG Trigger: CCCCACATAGCTTTTAAAGCAGTGTTTTATAAACCC...GCCTAGCCTAGCAAAACCCTTTTTCTGATAAATTGTTGTGACACTTCCCTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS CCA 90 bp | AGCACAGTCGCTTCGCCCACTAGTGAGGCGTTGACATTCCACACCTaGACGACATCCTCTCGGTCCCGCACACTCACGCTGACTCCGATG | + |
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Preference number: 5 (lower is better) Translates to: STVASPTSEALTFHT*TTSSRSRTLTLTPM Trigger: CATCGGAGTCAGCGTGAGTGTGCGGGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGCGACTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTCCTGGTGCCCTGTGGCTTCACAGGCAGTCCTGTGGCGGCTATGTTCGTGGACGTGCTGTCCTaGGGAACTTTCATCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GLLLVPCGFTGSPVAAMFVDVLS*GTFIFH Trigger: GTGGAAGATGAAAGTTCCCAAGGACAGCACGTCCAC...GAACATAGCCGCCACAGGACTGCCTGTGAAGCCACAGGGCACCAGGAGGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS TCA 90 bp | GGTGGATCTTCTCTAGCACAGTCGCTTCGCCCACTAGTGAGGCGTTaGCATTCCACACCTGGACGACATCCTCTCGGTCCCGCACACTCA | + |
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Preference number: 5 (lower is better) Translates to: GGSSLAQSLRPLVRR*HSTPGRHPLGPAHS Trigger: TGAGTGTGCGGGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGCGACTGTGCTAGAGAAGATCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS GCA 90 bp | CTGACTCCGATGATCTCGTCATCTGCTGCAGCACAGTCTGTGAACTaGTCTCCAATGGTCGCTAACAACAATTCTTTCCAAACTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LTPMISSSAAAQSVN*SPMVANNNSFQTVD Trigger: GTCCACAGTTTGGAAAGAATTGTTGTTAGCGACCATTGGAGAGCAGTTCACAGACTGTGCTGCAGCAGATGACGAGATCATCGGAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CAA 90 bp | CTCTTTAAAGCAAGTGATACGATGGCAGAAACCCGCACCTTCTTCCCCAACCCCACAGGAGGGATGTTATaGTATACACTCCAGAATATC | + |
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Preference number: 5 (lower is better) Translates to: LFKASDTMAETRTFFPNPTGGML*YTLQNI Trigger: GATATTCTGGAGTGTATACAATAACATCCCTCCTGT...GGGGTTGGGGAAGAAGGTGCGGGTTTCTGCCATCGTATCACTTGCTTTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS-3UTR CAA 90 bp | CTCTTTAAAGCAAGTGATACGATGGCAGAAACCCGCACCTTCTTCCCCAACCCCGAATATCTGCACTGTTaGTACCGTGTAGATTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LFKASDTMAETRTFFPNPEYLHC*YRVDFL Trigger: AAGAAAATCTACACGGTACAAACAGTGCAGATATTC...GGGGTTGGGGAAGAAGGTGCGGGTTTCTGCCATCGTATCACTTGCTTTAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS CCA 72 bp | GCTTCGCCCACTAGTGAGGCGTTGACATTCCACACCTaGACGACATCCTCTCGGTCCCGCACACTCACGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASPTSEALTFHT*TTSSRSRTLTL Trigger: CAGCGTGAGTGTGCGGGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS CAA 90 bp | TGGTGGATCTTCTCTAGCACAGTCGCTTCGCCCACTAGTGAGGCGTaGACATTCCACACCTGGACGACATCCTCTCGGTCCCGCACACTC | + |
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Preference number: 6 (lower is better) Translates to: WWIFSSTVASPTSEA*TFHTWTTSSRSRTL Trigger: GAGTGTGCGGGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGCGACTGTGCTAGAGAAGATCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS TCA 72 bp | TCTCTAGCACAGTCGCTTCGCCCACTAGTGAGGCGTTaGCATTCCACACCTGGACGACATCCTCTCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLAQSLRPLVRR*HSTPGRHPLGP Trigger: GGGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGCGACTGTGCTAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS CAA 72 bp | TTCTCTAGCACAGTCGCTTCGCCCACTAGTGAGGCGTaGACATTCCACACCTGGACGACATCCTCTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FSSTVASPTSEA*TFHTWTTSSRS Trigger: GGACCGAGAGGATGTCGTCCAGGTGTGGAATGTCAACGCCTCACTAGTGGGCGAAGCGACTGTGCTAGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS GCA 72 bp | CCGCACACTCACGCTGACTCCGATGATCTCGTCATCTaGTGCAGCACAGTCTGTGAACTGCTCTCCAATGGT | + |
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Preference number: 6 (lower is better) Translates to: PHTHADSDDLVI*CSTVCELLSNG Trigger: ACCATTGGAGAGCAGTTCACAGACTGTGCTGCAGCAGATGACGAGATCATCGGAGTCAGCGTGAGTGTGCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS CCA 72 bp | ACAACAATTCTTTCCAAACTGTGGACGTGCTGTCCTTaGGAACTTTCATCTTCCACACGCCACCCTTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: TTILSKLWTCCP*ELSSSTRHPSH Trigger: ATGCGAAGGGTGGCGTGTGGAAGATGAAAGTTCCCAAGGACAGCACGTCCACAGTTTGGAAAGAATTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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| CDS GCA 72 bp | ATGATCTCGTCATCTGCTGCAGCACAGTCTGTGAACTaGTCTCCAATGGTCGCTAACAACAATTCTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: MISSSAAAQSVN*SPMVANNNSFQ Trigger: TTGGAAAGAATTGTTGTTAGCGACCATTGGAGAGCAGTTCACAGACTGTGCTGCAGCAGATGACGAGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032151.3 |
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