Pregenerated sensors for EIF4E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028156Ensembl transcript IDs: ENSMUST00000029803.12
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGACTGGCATGACCACAGCTGGAGGGGAGGGGATGTTACAAAGTaGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: HDWHDHSWRGGDVTK*HLYALAFRHPPTVG Trigger: TCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAGCTGTGGTCATGCCAGTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 90 bp | CTAGAATCCCACATGTTGGTAAGAAAGCCTCATCAGCCACCTTCATaGCTGTACACTGTATCAATCAGCTTCAGGGAGCCAACCGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LESHMLVRKPHQPPS*LYTVSISFREPTGV Trigger: GACCCCGGTTGGCTCCCTGAAGCTGATTGATACAGTGTACAGGCATGAAGGTGGCTGATGAGGCTTTCTTACCAACATGTGGGATTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 90 bp | CCACCACTTAAAGAGCATTTTTCTCTCAGCCAATGGTTTCCACTCTaGTACCCACAGTTCAGCTTACCCTTCGGCGTTAACAGCCACACC | + |
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Preference number: 1 (lower is better) Translates to: PPLKEHFSLSQWFPL*YPQFSLPFGVNSHT Trigger: GGTGTGGCTGTTAACGCCGAAGGGTAAGCTGAACTGTGGGTAGCAGAGTGGAAACCATTGGCTGAGAGAAAAATGCTCTTTAAGTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 90 bp | ACAGCTGGAGGGGAGGGGATGTTACAAAGTGGCATTTGTATGCACTaGCTTTCAGGCATCCTCCCACAGTGGGATTCATTTGGATTCAAT | + |
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Preference number: 1 (lower is better) Translates to: TAGGEGMLQSGICMH*LSGILPQWDSFGFN Trigger: ATTGAATCCAAATGAATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 90 bp | TGGCTCTGCAGTAAGCAGAGTCGTTGGTTTTGTGTAAGATCCAGTTaGCTCCCAGCACTCACATGGTGGCTCACAACTGTGCTAAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: WLCSKQSRWFCVRSS*LPALTWWLTTVLSN Trigger: ATTACTTAGCACAGTTGTGAGCCACCATGTGAGTGCTGGGAGTCAACTGGATCTTACACAAAACCAACGACTCTGCTTACTGCAGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 90 bp | CGAGACAGGGTTTGTGTAGCCTTAGTTGTCCTAGAACTAGCATTATaGACCAGGCTGGCCTCAAGGTATACTCATCAATTTGATGTGTAT | + |
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Preference number: 1 (lower is better) Translates to: RDRVCVALVVLELAL*TRLASRYTHQFDVY Trigger: ATACACATCAAATTGATGAGTATACCTTGAGGCCAGCCTGGTCCATAATGCTAGTTCTAGGACAACTAAGGCTACACAAACCCTGTCTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 90 bp | TGTCATGAAAAACAAATGAACATACCATCACATAAACAAGAGCCATaGGGCTGGAGTAATGGCTCTGCAGTAAGCAGAGTCGTTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: CHEKQMNIPSHKQEP*GWSNGSAVSRVVGF Trigger: AAAACCAACGACTCTGCTTACTGCAGAGCCATTACTCCAGCCCCATGGCTCTTGTTTATGTGATGGTATGTTCATTTGTTTTTCATGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 90 bp | TTTCCTGCTAAGGTAATAGAAATGCAAGTTCTTTTTCGAATACTGTaGAAAGGCAAATGTGTGTGTCATGGTAATTCTAACCGGCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: FPAKVIEMQVLFRIL*KGKCVCHGNSNRLL Trigger: TAACAGCCGGTTAGAATTACCATGACACACACATTTGCCTTTCCACAGTATTCGAAAAAGAACTTGCATTTCTATTACCTTAGCAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 90 bp | TGGCATGACCACAGCTGGAGGGGAGGGGATGTTACAAAGTGGCATTaGTATGCACTGGCTTTCAGGCATCCTCCCACAGTGGGATTCATT | + |
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Preference number: 2 (lower is better) Translates to: WHDHSWRGGDVTKWH*YALAFRHPPTVGFI Trigger: AATGAATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAGCTGTGGTCATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCACCTCAGGCACCACACGATACAAAACATGCATGCATACACATTAAAAAACCCACGACTGGCATaGCCACAGCTGGAGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ADHLRHHTIQNMHAYTLKNPRLA*PQLEGR Trigger: CCTCCCCTCCAGCTGTGGTCATGCCAGTCGTGGGTT...TTTTAATGTGTATGCATGCATGTTTTGTATCGTGTGGTGCCTGAGGTGGTCAGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCATTATGGACCAGGCTaGCCTCAAGGTATACTCATC | + |
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Preference number: 2 (lower is better) Translates to: GEGMLQSGICMHWLSGILHYGPG*PQGILI Trigger: GATGAGTATACCTTGAGGCCAGCCTGGTCCATAATG...GAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CCA 90 bp | GGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACACTAGAACTAGCATTATaGACCAGGCTGGCCTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GDVTKWHLYALAFRHPPTLELAL*TRLASR Trigger: CCTTGAGGCCAGCCTGGTCCATAATGCTAGTTCTAG...TGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR GCA 90 bp | GGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACACATCAGCCACCTTCATaGCTGTACACTGTATCAATC | + |
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Preference number: 2 (lower is better) Translates to: GDVTKWHLYALAFRHPPTHQPPS*LYTVSI Trigger: GATTGATACAGTGTACAGGCATGAAGGTGGCTGATG...TGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR TCA 90 bp | GTACATGCTTGGCAAGCACTCTCAATGAAGCACATTCCTGGTCCTTGTCTTTTTGGTGGGGGAGGAGAATaGACACAGAAGTACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: VHAWQALSMKHIPGPCLFGGGGE*TQKYKT Trigger: TGTCTTGTACTTCTGTGTTCATTCTCCTCCCCCACC...AAAAAGACAAGGACCAGGAATGTGCTTCATTGAGAGTGCTTGCCAAGCATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR GCA 90 bp | TTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACAGTGGGATGGACAGCAAGGACAATaGTGTGAAAGGAAACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LQSGICMHWLSGILPQWDGQQGQ*CERKQK Trigger: CTTCTGTTTCCTTTCACAGCATTGTCCTTGCTGTCC...ATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 90 bp | TTTGTATGCACTGGCTTTCAGGCATCCTCCCACAGTGGGATTCATTaGGATTCAATGTTTCGAGACAGGGTTTGTGTAGCCTTAGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: FVCTGFQASSHSGIH*DSMFRDRVCVALVV Trigger: GACAACTAAGGCTACACAAACCCTGTCTCGAAACATTGAATCCAAATGAATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR TCA 90 bp | AATAAACTAGTGCTCCAAACTGAGGCTGTGCATGGGGAAGACACTCTAAGAAGAGCAAGGACAATGCTGTaGAAGGAAACAGAAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: NKLVLQTEAVHGEDTLRRARTML*KETEGC Trigger: GCAACCTTCTGTTTCCTTTCACAGCATTGTCCTTGC...TCTTCTTAGAGTGTCTTCCCCATGCACAGCCTCAGTTTGGAGCACTAGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CCA 90 bp | ACACAAGAGACTGCCTTGCAATACGAAGTACAGATTCCTTCTAGAGATGGAGAACGCTCCTGCATGGAGTaGAGCAAAACCAGATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TQETALQYEVQIPSRDGERSCME*SKTRSF Trigger: GAAAGATCTGGTTTTGCTCCACTCCATGCAGGAGCG...TTCTCCATCTCTAGAAGGAATCTGTACTTCGTATTGCAAGGCAGTCTCTTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR TCA 90 bp | GTACATGCTTGGCAAGCACTCTCAATGAAGCACATTCCTGGTCCTTGTCTTTTTTCCATCTCAGCACTGTaGTTACAGATATGTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: VHAWQALSMKHIPGPCLFSISAL*LQICTH Trigger: GTGGGTACATATCTGTAATCACAGTGCTGAGATGGA...AAAAAGACAAGGACCAGGAATGTGCTTCATTGAGAGTGCTTGCCAAGCATGTAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR GCA 90 bp | TATCTATCCACTTGCCCCATAATACTCCACACTGAGAATACAAAGCTGGGTGTCGAAGACACAAGAGACTaGCTTGCAATACGAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: YLSTCPIILHTENTKLGVEDTRD*LAIRST Trigger: TGTACTTCGTATTGCAAGGCAGTCTCTTGTGTCTTC...GACACCCAGCTTTGTATTCTCAGTGTGGAGTATTATGGGGCAAGTGGATAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CCA 90 bp | ACACAAGAGACTGCCTTGCAATACGAAGTACAGATTCCTTCTAGAGATGGAGAATTAGCAACACTTGGATaGAATCAACTTCAGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TQETALQYEVQIPSRDGELATLG*NQLQCS Trigger: ACTGCACTGAAGTTGATTCCATCCAAGTGTTGCTAA...TTCTCCATCTCTAGAAGGAATCTGTACTTCGTATTGCAAGGCAGTCTCTTGTGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR GCA 90 bp | TATCATGTTGCAATGTCAAAAGATCTCTCAATGATCCACACAGTAGATGTAGGGAGGACTGAGCAACTGTaGCTTAACTTTATTAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: YHVAMSKDLSMIHTVDVGRTEQL*LNFIKK Trigger: CTTTTTAATAAAGTTAAGGCACAGTTGCTCAGTCCT...CCCTACATCTACTGTGTGGATCATTGAGAGATCTTTTGACATTGCAACATGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | CCCAGCACTTATTCTGGTGCCCAGCCTAGTCTACAGTaGGTTCCAGGACAGCCTGGGCTTATAGAAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PSTYSGAQPSLQ*VPGQPGLIESL Trigger: CAGGCTTTCTATAAGCCCAGGCTGTCCTGGAACTCACTGTAGACTAGGCTGGGCACCAGAATAAGTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | GGAGGCAGAGGCAGTTGCTCAGCCTGGTCTACAGAATaGGTTCCAGAACAGCCAAGGCTACAGAGAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: GGRGSCSAWSTE*VPEQPRLQRKP Trigger: AGGTTTTCTCTGTAGCCTTGGCTGTTCTGGAACTCATTCTGTAGACCAGGCTGAGCAACTGCCTCTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 72 bp | CTGGAGGGGAGGGGATGTTACAAAGTGGCATTTGTATaGACTGGCTTTCAGGCATCCTCCCACAGTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: LEGRGCYKVAFV*TGFQASSHSGI Trigger: AATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | GGGGAGGGGATGTTACAAAGTGGCATTTGTATGCACTaGCTTTCAGGCATCCTCCCACAGTGGGATTCATTT | + |
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Preference number: 3 (lower is better) Translates to: GEGMLQSGICMH*LSGILPQWDSF Trigger: AAATGAATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | AAACCAAACCAAACCCACGACTGGCATGACCACAGCTaGAGGGGAGGGGATGTTACAAAGTGGCATTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: KPNQTHDWHDHS*RGGDVTKWHLY Trigger: ATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAGCTGTGGTCATGCCAGTCGTGGGTTTGGTTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CAA 90 bp | GGGGAGGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCTAGAATCCCACATGTaGGTAAGAAAGCCTCATCAG | + |
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Preference number: 3 (lower is better) Translates to: GEGMLQSGICMHWLSGILLESHM*VRKPHQ Trigger: CTGATGAGGCTTTCTTACCAACATGTGGGATTCTAG...GAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 72 bp | CACATGTTGGTAAGAAAGCCTCATCAGCCACCTTCATaGCTGTACACTGTATCAATCAGCTTCAGGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: HMLVRKPHQPPS*LYTVSISFREP Trigger: TGGCTCCCTGAAGCTGATTGATACAGTGTACAGGCATGAAGGTGGCTGATGAGGCTTTCTTACCAACATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CAA 90 bp | GGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACAGAACATAGTACATGCTaGGCAAGCACTCTCAATGAA | + |
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Preference number: 3 (lower is better) Translates to: GDVTKWHLYALAFRHPPTEHSTC*ASTLNE Trigger: TTCATTGAGAGTGCTTGCCAAGCATGTACTATGTTC...TGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 72 bp | AAAGAGCATTTTTCTCTCAGCCAATGGTTTCCACTCTaGTACCCACAGTTCAGCTTACCCTTCGGCGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: KEHFSLSQWFPL*YPQFSLPFGVN Trigger: GTTAACGCCGAAGGGTAAGCTGAACTGTGGGTAGCAGAGTGGAAACCATTGGCTGAGAGAAAAATGCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | CAACCACCACTTAAAGAGCATTTTTCTCTCAGCCAATaGTTTCCACTCTGCTACCCACAGTTCAGCTTACCC | + |
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Preference number: 3 (lower is better) Translates to: QPPLKEHFSLSQ*FPLCYPQFSLP Trigger: GGGTAAGCTGAACTGTGGGTAGCAGAGTGGAAACCATTGGCTGAGAGAAAAATGCTCTTTAAGTGGTGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | AGTGCTGGCAATCACACACAGAACATAGTACATGCTTaGCAAGCACTCTCAATGAAGCACATTCCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SAGNHTQNIVHA*QALSMKHIPGP Trigger: AGGACCAGGAATGTGCTTCATTGAGAGTGCTTGCCAAGCATGTACTATGTTCTGTGTGTGATTGCCAGCACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | ATGAACATACCATCACATAAACAAGAGCCATGGGGCTaGAGTAATGGCTCTGCAGTAAGCAGAGTCGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: MNIPSHKQEPWG*SNGSAVSRVVG Trigger: ACCAACGACTCTGCTTACTGCAGAGCCATTACTCCAGCCCCATGGCTCTTGTTTATGTGATGGTATGTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | AACAATCAGTTTCTAGCCGCTGTTCCTACCGAATGGTaGTGCACCAAAACCCCAATCCTCATCAACTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: NNQFLAAVPTEW*CTKTPILINCN Trigger: GTTACAGTTGATGAGGATTGGGGTTTTGGTGCATCACCATTCGGTAGGAACAGCGGCTAGAAACTGATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | CCAGGTTGGCCTTATGGTCATTCCATCTCAGCACTGTaGTTACAGATATGTACCCACCATACAGGCCATTTA | + |
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Preference number: 3 (lower is better) Translates to: PGWPYGHSISAL*LQICTHHTGHL Trigger: TAAATGGCCTGTATGGTGGGTACATATCTGTAATCACAGTGCTGAGATGGAATGACCATAAGGCCAACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 72 bp | GGGGAAGACACTCTAAGAAGACACAAGAGACTGCCTTaGAATACGAAGTACAGATTCCTTCTAGAGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: GEDTLRRHKRLP*NTKYRFLLEME Trigger: CTCCATCTCTAGAAGGAATCTGTACTTCGTATTGCAAGGCAGTCTCTTGTGTCTTCTTAGAGTGTCTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CAA 90 bp | TTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCCCACAGTGGGATCTGGTCCTTGTCTTTTaGATAAAGGGTTTACGTAAC | + |
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Preference number: 3 (lower is better) Translates to: LQSGICMHWLSGILPQWDLVLVF*IKGLRN Trigger: GTTACGTAAACCCTTTATCAAAAAGACAAGGACCAG...ATCCCACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | ATGGACCAGGCTGGCCTCAAGGTATACTCATCAATTTaGTGTGTATTTAGAGGGCTGGTGCCAAATGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: MDQAGLKVYSSI*CVFRGLVPNEN Trigger: ATTCTCATTTGGCACCAGCCCTCTAAATACACATCAAATTGATGAGTATACCTTGAGGCCAGCCTGGTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | AAACAAATGAACATACCATCACATAAACAAGAGCCATaGGGCTGGAGTAATGGCTCTGCAGTAAGCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: KQMNIPSHKQEP*GWSNGSAVSRV Trigger: GACTCTGCTTACTGCAGAGCCATTACTCCAGCCCCATGGCTCTTGTTTATGTGATGGTATGTTCATTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | GTTTGTGTAGCCTTAGTTGTCCTAGAACTAGCATTATaGACCAGGCTGGCCTCAAGGTATACTCATCAATTT | + |
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Preference number: 3 (lower is better) Translates to: VCVALVVLELAL*TRLASRYTHQF Trigger: AAATTGATGAGTATACCTTGAGGCCAGCCTGGTCCATAATGCTAGTTCTAGGACAACTAAGGCTACACAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CCA 72 bp | TTTAGACCATGGAGTCTTAATCTGAGAATACAAAACTaGGTAGGGGTAGTGGTGGTGAACACCTTTAATCCC | + |
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Preference number: 3 (lower is better) Translates to: FRPWSLNLRIQN*VGVVVVNTFNP Trigger: GGGATTAAAGGTGTTCACCACCACTACCCCTACCCAGTTTTGTATTCTCAGATTAAGACTCCATGGTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | AGAATATCTATCCACTTGCCCCATAATACTCCACACTaGGAATACAAAGCTGGGTGTCATGAGAAACGTGAT | + |
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Preference number: 3 (lower is better) Translates to: RISIHLPHNTPH*EYKAGCHEKRD Trigger: ATCACGTTTCTCATGACACCCAGCTTTGTATTCTCAGTGTGGAGTATTATGGGGCAAGTGGATAGATATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR GCA 72 bp | TCAAAGTCCATCACTCAACCTAGGACTGAGCAACTGTaGCTTAACTTTATTAAAAAGATAGCCACATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SKSITQPRTEQL*LNFIKKIATSV Trigger: CACTGATGTGGCTATCTTTTTAATAAAGTTAAGGCACAGTTGCTCAGTCCTAGGTTGAGTGATGGACTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR-3UTR CAA 90 bp | CAGGATCTGAACTATACAATTACGTACTGCAGACAAAATGTCTTCATGTTTGCTACACAAGAGACTGCCTaGCAATACGAAGTACAGATT | + |
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Preference number: 3 (lower is better) Translates to: QDLNYTITYCRQNVFMFATQETA*QYEVQI Trigger: AATCTGTACTTCGTATTGCAAGGCAGTCTCTTGTGT...AGCAAACATGAAGACATTTTGTCTGCAGTACGTAATTGTATAGTTCAGATCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR TCA 72 bp | TCCAGCAGCATTCAAGAACGTCTATTTCTGTCAAGTTaGACACTACCATCTATCTTAGATGGTGATTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SSSIQERLFLSS*TLPSILDGDLE Trigger: CTCTAAATCACCATCTAAGATAGATGGTAGTGTTCAACTTGACAGAAATAGACGTTCTTGAATGCTGCTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | CACAGCTGGAGGGGAGGGGATGTTACAAAGTGGCATTaGTATGCACTGGCTTTCAGGCATCCTCCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: HSWRGGDVTKWH*YALAFRHPPTV Trigger: CACTGTGGGAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCCTCCAGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR GCA 90 bp | CCACCTTCATGCCTGTACACTGTATCAATCAGCTTCAGGGAGCCAACCGGGGTCAGGTCACTCCGTCTCTaGTGCTTGTTCAGTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: PPSCLYTVSISFREPTGVRSLRL*CLFSVI Trigger: GATCACACTGAACAAGCAGCAGAGACGGAGTGACCT...GACCCCGGTTGGCTCCCTGAAGCTGATTGATACAGTGTACAGGCATGAAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR CCA 90 bp | GGGGAGGGGATGTTACAAAGTGGCATTTGTATGCACTGGCTTTCAGGCATCCTCTTCCTCTTCTGCAGGTaGGGGATTAGTGGTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GEGMLQSGICMHWLSGILFLFCR*GISGRG Trigger: ACCCCTACCACTAATCCCCCACCTGCAGAAGAGGAA...GAGGATGCCTGAAAGCCAGTGCATACAAATGCCACTTTGTAACATCCCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | ACACCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGTaGCTCAGCCTGGTCTACAGAATGAGTTCCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: TPLIPALWRQRQ*LSLVYRMSSRT Trigger: TGTTCTGGAACTCATTCTGTAGACCAGGCTGAGCAACTGCCTCTGCCTCCAGAGTGCTGGGATTAAAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR TCA 90 bp | GCTGACCACCTCAGGCACCACACGATACAAAACATGCATGCATACACATTAAAAGCTGCTTGTTCAGTGTaGTCAGCCACCGTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ADHLRHHTIQNMHAYTLKAACSV*SATVLL Trigger: GAGGAGGACGGTGGCTGATCACACTGAACAAGCAGC...TTTTAATGTGTATGCATGCATGTTTTGTATCGTGTGGTGCCTGAGGTGGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | CAGTGCTGGCAATCACACACAGAACATAGTACATGCTaGGCAAGCACTCTCAATGAAGCACATTCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QCWQSHTEHSTC*ASTLNEAHSWS Trigger: GGACCAGGAATGTGCTTCATTGAGAGTGCTTGCCAAGCATGTACTATGTTCTGTGTGTGATTGCCAGCACTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | ACTGGCTTTCAGGCATCCTCCCACAGTGGGATTCATTaGGATTCAATGTTTCGAGACAGGGTTTGTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TGFQASSHSGIH*DSMFRDRVCVA Trigger: GGCTACACAAACCCTGTCTCGAAACATTGAATCCAAATGAATCCCACTGTGGGAGGATGCCTGAAAGCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | CCCAAAGAAAGAAAATCAAAGTACTACCGGGCAGTGTaGGGGGCACAACCTTTAATCCCAGCACTTATTCTG | + |
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Preference number: 4 (lower is better) Translates to: PKERKSKYYRAV*GAQPLIPALIL Trigger: CAGAATAAGTGCTGGGATTAAAGGTTGTGCCCCCAACACTGCCCGGTAGTACTTTGATTTTCTTTCTTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR GCA 90 bp | TATCTATCCACTTGCCCCATAATACTCCACACTGAGAATACAAAGCTGGGTGTCCCCTATGTGTGTGACTaGATCTCTGTTTTCACACTC | + |
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Preference number: 4 (lower is better) Translates to: YLSTCPIILHTENTKLGVPYVCD*ISVFTL Trigger: GAGTGTGAAAACAGAGATGCAGTCACACACATAGGG...GACACCCAGCTTTGTATTCTCAGTGTGGAGTATTATGGGGCAAGTGGATAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR GCA 90 bp | CAGGATCTGAACTATACAATTACGTACTGCAGACAAAATGTCTTCATGTTTGCTTCACTCCGTCTCTGCTaGTTGTTCAGTGTGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: QDLNYTITYCRQNVFMFASLRLC*LFSVIS Trigger: GCTGATCACACTGAACAAGCAGCAGAGACGGAGTGA...AGCAAACATGAAGACATTTTGTCTGCAGTACGTAATTGTATAGTTCAGATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| CDS-3UTR GCA 90 bp | TATCTATCCACTTGCCCCATAATACTCCACACTGAGAATACAAAGCTGGGTGTCGATCAATCGAAGGTTTaGTTGCCAAGTTTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: YLSTCPIILHTENTKLGVDQSKV*LPSFAF Trigger: AAAAGCAAAACTTGGCAAGCAAACCTTCGATTGATC...GACACCCAGCTTTGTATTCTCAGTGTGGAGTATTATGGGGCAAGTGGATAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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| 3UTR CAA 72 bp | TTATCTGTGACAACAAGAGCAGGCGGTTATACATTCTaGACGTACATAATAAGAGCAATGCTATTAATTCCG | + |
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Preference number: 4 (lower is better) Translates to: LSVTTRAGGYTF*TYIIRAMLLIP Trigger: CGGAATTAATAGCATTGCTCTTATTATGTACGTCAAGAATGTATAACCGCCTGCTCTTGTTGTCACAGATAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029803.12 |
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