RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EIF4A3L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094973

Ensembl transcript IDs: ENSMUST00000077886.7, ENSMUST00000204530.2, ENSMUST00000204966.2

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCACCTCCCCGACATTGGTaGCCCCAACGCAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: AEAEGLPEGLREDSSYQPPPRHW*PQRRHG
Trigger: GCCATGCCTGCGTTGGGGGCACCAATGTCGGGGAGG...TGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR CCA 90 bp ATTGGGTCATTTACACGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: IGSFTRALEKMAEAEGLPPLAGP*CRTWGS
Trigger: CGACCCCCACGTTCGACACCATGGGCCTGCGAGAGG...GGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACGTGTAAATGACCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR CCA 90 bp AGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCCGAGAACGACCTGTGTaGCTGGTGGCAAATACCTGT +
Preference number: 4 (lower is better)
Translates to: RWRRLRVFPRGSEKTVHIRERPV*LVANTC
Trigger: ACAGGTATTTGCCACCAGCCACACAGGTCGTTCTCG...GATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR GCA 90 bp AGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCGCCAGACTGAGACTGTaGGATGACATCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RWRRLRVFPRGSEKTVHIARLRL*DDISPF
Trigger: AAAGGGAGAGATGTCATCGCACAGTCTCAGTCTGGC...GATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR CCA 90 bp GGGTCATTTACACGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCGAGCGTCCACCTCCTCGCTaGTCTCGAACTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GSFTRALEKMAEAEGLPERPPPR*SRTPLW
Trigger: CCAAAGTGGAGTTCGAGACCAGCGAGGAGGTGGACG...CTCGGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACGTGTAAATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR CCA 90 bp ATTGGGTCATTTACACGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCCCATGGTGTCGAACGTaGGGGTCGCGTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: IGSFTRALEKMAEAEGLPPWCRT*GSRPPP
Trigger: AGGAGGTGGACGCGACCCCCACGTTCGACACCATGG...GGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACGTGTAAATGACCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR TCA 90 bp GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAAATGATGAGGGACACCTaGGGGACATCCAGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GSSRGAPRRQFISTNPIKMMRDT*GTSRPR
Trigger: TCGAGGCCTGGATGTCCCTCAGGTGTCCCTCATCAT...TTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR TCA 90 bp GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAAATCTCCAGGATCTCATaGGGCAGTGTGGCACTGACG +
Preference number: 4 (lower is better)
Translates to: GSSRGAPRRQFISTNPIKISRIS*GSVALT
Trigger: CGTCAGTGCCACACTGCCTCATGAGATCCTGGAGAT...TTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR TCA 90 bp CTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAATAGAAGACATCTGTGGAGATaGGCACCCGGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: LPEGLREDSSYQPTPLNRRHLWR*APGWHL
Trigger: CAGGTGCCAGCCGGGTGCTCATCTCCACAGATGTCT...TCTATTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR GCA 90 bp CTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAATAGATGGGGCATATCTCCATaGATGGACGACACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LPEGLREDSSYQPTPLNRWGISP*MDDTVK
Trigger: TTTCACTGTGTCGTCCATGCATGGAGATATGCCCCA...TCTATTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR TCA 90 bp CTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAATAGAACTGAGACTGTGCGATaGCATCTCTCCCTTTCATTA +
Preference number: 4 (lower is better)
Translates to: LPEGLREDSSYQPTPLNRTETVR*HLSLSL
Trigger: TAATGAAAGGGAGAGATGTCATCGCACAGTCTCAGT...TCTATTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS-3UTR TCA 90 bp CTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCATTAAATAGACATAGATCTGCTCCTTaGAACCTCTGTTCAACATCT +
Preference number: 4 (lower is better)
Translates to: LPEGLREDSSYQPTPLNRHRSAP*NLCSTS
Trigger: AGATGTTGAACAGAGGTTTCAAGGAGCAGATCTATG...TCTATTTAATGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS CCA 90 bp AACCGTAGGCGTAGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCGCGTCCACCTCCTCGCTGGTCTCGA +
Preference number: 5 (lower is better)
Translates to: NRRRRCRAAGPLAGP*CRTWGSRPPPRWSR
Trigger: TCGAGACCAGCGAGGAGGTGGACGCGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCTACGCCTACGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CCA 90 bp AGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATGGTGTCGAACGTaGGGGTCGCGTCCACCTCCTCGCTGGTCTCGAACTCCACTTTGG +
Preference number: 5 (lower is better)
Translates to: RCRAAGPLAGPWCRT*GSRPPPRWSRTPLW
Trigger: CCAAAGTGGAGTTCGAGACCAGCGAGGAGGTGGACGCGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS-3UTR CAA 90 bp GCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTTCATATCAACCAACCCCAGTCATGCCGTCCTCTTaGAGCAGCCGCTTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: AEGLPEGLREDSSYQPTPVMPSS*SSRFRA
Trigger: GGCGCGGAAGCGGCTGCTCAAAGAGGACGGCATGAC...TGGGGTTGGTTGATATGAACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS GCA 90 bp CATGCTGCCCGTAGTCCAGCTTCCGGATGTCCTCCCCGACATTGGTaGCCCCAACGCAGGCATGGCACTGCACGTTCATGTAATCTCCCA +
Preference number: 5 (lower is better)
Translates to: HAARSPASGCPPRHW*PQRRHGTARSCNLP
Trigger: TGGGAGATTACATGAACGTGCAGTGCCATGCCTGCGTTGGGGGCACCAATGTCGGGGAGGACATCCGGAAGCTGGACTACGGGCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS TCA 90 bp ATCTCCCAGAGCGAGCAGACCCTGGATATCCAAGCACTGGAGCACTaGGATACTGAAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACTG +
Preference number: 5 (lower is better)
Translates to: ISQSEQTLDIQALEH*DTEGGRLACARLRL
Trigger: CAGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGGTCTGCTCGCTCTGGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204966.2
CDS CCA 90 bp CTCCCAGAGCGAGCAGACCCTTCTGAATCTGCACCGCTAACTCTCTaGTTGGAGCCAGGATCAAAGCTTGGGTTTCTCGAACCTGGATAT +
Preference number: 5 (lower is better)
Translates to: LPERADPSESAPLTL*LEPGSKLGFLEPGY
Trigger: ATATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGAGAGTTAGCGGTGCAGATTCAGAAGGGTCTGCTCGCTCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
CDS CCA 90 bp CTCATGAGGCAGTGTGGCACTGACGAGAACGACCTGTGTGGCTGGTaGCAAATACCTGTACACATCATAGATCTGCTCCTTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: LMRQCGTDENDLCGW*QIPVHIIDLLLETS
Trigger: AGAGGTTTCAAGGAGCAGATCTATGATGTGTACAGGTATTTGCCACCAGCCACACAGGTCGTTCTCGTCAGTGCCACACTGCCTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CCA 90 bp GATCTCATGAGGCAGTGTGGCACTGACGAGAACGACCTGTGTGGCTaGTGGCAAATACCTGTACACATCATAGATCTGCTCCTTGAAACC +
Preference number: 5 (lower is better)
Translates to: DLMRQCGTDENDLCG*WQIPVHIIDLLLET
Trigger: GGTTTCAAGGAGCAGATCTATGATGTGTACAGGTATTTGCCACCAGCCACACAGGTCGTTCTCGTCAGTGCCACACTGCCTCATGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS-3UTR CAA 90 bp AGCATTGGGTCATTTACACGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCTTTCATTATCTGCTaGATAGCACGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: SIGSFTRALEKMAEAEGLPFIIC*IARCWI
Trigger: GATCCAGCAGCGTGCTATCAAGCAGATAATGAAAGG...AAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACGTGTAAATGACCCAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000204530.2
CDS CCA 72 bp CGTAGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCGCGTCCACCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: RRCRAAGPLAGP*CRTWGSRPPPR
Trigger: GCGAGGAGGTGGACGCGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCTACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CCA 72 bp GCAGCAGGTCCTCTCGCAGGCCCATGGTGTCGAACGTaGGGGTCGCGTCCACCTCCTCGCTGGTCTCGAACT +
Preference number: 6 (lower is better)
Translates to: AAGPLAGPWCRT*GSRPPPRWSRT
Trigger: AGTTCGAGACCAGCGAGGAGGTGGACGCGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CAA 90 bp AACGTGGGGGTCGCGTCCACCTCCTCGCTGGTCTCGAACTCCACTTaGGTCATGCCGTCCTCTTTGAGCAGCCGCTTCCGCGCCGAGCCA +
Preference number: 6 (lower is better)
Translates to: NVGVASTSSLVSNST*VMPSSLSSRFRAEP
Trigger: TGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGACGGCATGACCAAAGTGGAGTTCGAGACCAGCGAGGAGGTGGACGCGACCCCCACGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CAA 72 bp CTGGTCTCGAACTCCACTTTGGTCATGCCGTCCTCTTaGAGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCC +
Preference number: 6 (lower is better)
Translates to: LVSNSTLVMPSS*SSRFRAEPDVA
Trigger: GGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGACGGCATGACCAAAGTGGAGTTCGAGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS TCA 72 bp TGGTCTCGAACTCCACTTTGGTCATGCCGTCCTCTTTaGGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCCA +
Preference number: 6 (lower is better)
Translates to: WSRTPLWSCRPL*AAASAPSQTSP
Trigger: TGGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGACGGCATGACCAAAGTGGAGTTCGAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CAA 72 bp GTCGCGTCCACCTCCTCGCTGGTCTCGAACTCCACTTaGGTCATGCCGTCCTCTTTGAGCAGCCGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: VASTSSLVSNST*VMPSSLSSRFR
Trigger: GCGGAAGCGGCTGCTCAAAGAGGACGGCATGACCAAAGTGGAGTTCGAGACCAGCGAGGAGGTGGACGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS GCA 72 bp CGTAGTCCAGCTTCCGGATGTCCTCCCCGACATTGGTaGCCCCAACGCAGGCATGGCACTGCACGTTCATGT +
Preference number: 6 (lower is better)
Translates to: RSPASGCPPRHW*PQRRHGTARSC
Trigger: ACATGAACGTGCAGTGCCATGCCTGCGTTGGGGGCACCAATGTCGGGGAGGACATCCGGAAGCTGGACTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CCA 72 bp TGGTGTCGAACGTGGGGGTCGCGTCCACCTCCTCGCTaGTCTCGAACTCCACTTTGGTCATGCCGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: WCRTWGSRPPPR*SRTPLWSCRPL
Trigger: AAGAGGACGGCATGACCAAAGTGGAGTTCGAGACCAGCGAGGAGGTGGACGCGACCCCCACGTTCGACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS TCA 72 bp AGCGAGCAGACCCTGGATATCCAAGCACTGGAGCACTaGGATACTGAAGGTGGCCGTCTTGCCTGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SEQTLDIQALEH*DTEGGRLACAR
Trigger: TCTGGCACAGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGGTCTGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204966.2
CDS CCA 72 bp TCTCCCAGAGCGAGCAGACCCTGGATATCCAAGCACTaGAGCACTGAGATACTGAAGGTGGCCGTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SPRASRPWISKH*STEILKVAVLP
Trigger: AGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGGTCTGCTCGCTCTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204966.2
CDS TCA 72 bp GACCCTGGATATCCAAGCACTGGAGCACTGAGATACTaGAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACT +
Preference number: 6 (lower is better)
Translates to: DPGYPSTGALRY*RWPSCLCQTET
Trigger: AGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000204966.2
CDS TCA 72 bp GAACCTGGATATCCAAGCACTGGAGCACTGAGATACTaGAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACT +
Preference number: 6 (lower is better)
Translates to: EPGYPSTGALRY*RWPSCLCQTET
Trigger: AGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
CDS TCA 72 bp GGTTTCTCGAACCTGGATATCCAAGCACTGGAGCACTaGGATACTGAAGGTGGCCGTCTTGCCTGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GFSNLDIQALEH*DTEGGRLACAR
Trigger: TCTGGCACAGGCAAGACGGCCACCTTCAGTATCTCAGTGCTCCAGTGCTTGGATATCCAGGTTCGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
CDS CCA 72 bp AGGCAGTGTGGCACTGACGAGAACGACCTGTGTGGCTaGTGGCAAATACCTGTACACATCATAGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: RQCGTDENDLCG*WQIPVHIIDLL
Trigger: GAGCAGATCTATGATGTGTACAGGTATTTGCCACCAGCCACACAGGTCGTTCTCGTCAGTGCCACACTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CCA 72 bp CAGTGTGGCACTGACGAGAACGACCTGTGTGGCTGGTaGCAAATACCTGTACACATCATAGATCTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: QCGTDENDLCGW*QIPVHIIDLLL
Trigger: AAGGAGCAGATCTATGATGTGTACAGGTATTTGCCACCAGCCACACAGGTCGTTCTCGTCAGTGCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2
CDS CAA 72 bp GACTGTGCGATGACATCTCTCCCTTTCATTATCTGCTaGATAGCACGCTGCTGGATCGCTGAAGGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: DCAMTSLPFIIC*IARCWIAEGFS
Trigger: TGAAAAACCTTCAGCGATCCAGCAGCGTGCTATCAAGCAGATAATGAAAGGGAGAGATGTCATCGCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077886.7
ENSMUST00000204530.2
ENSMUST00000204966.2