Pregenerated sensors for EIF4A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025580Ensembl transcript IDs: ENSMUST00000026667.15, ENSMUST00000106253.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCCTCGCCGACGTTGGTaGCCCCAATGCAGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: AEAEGLPEGLREDSPYQPPRRRW*PQCRHG Trigger: GCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGG...GGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | CGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCTGTCCTCGCCGACGTTaGTGCCCCCAATGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RRLRVFPRGSEKTVHINPCPRRR*CPQCRH Trigger: ATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACA...GGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | GCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCGACCTGTGTGGCTGGTaGCAAGTACCTGTACACATC | + |
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Preference number: 4 (lower is better) Translates to: AEAEGLPEGLREDSPYQPDLCGW*QVPVHI Trigger: GATGTGTACAGGTACTTGCCACCAGCCACACAGGTC...GGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR TCA 90 bp | GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCATTAAATAGAATGATGAGGGACACCTaGGGGACATCCAGGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GSSRGAPRRQSISTPLNRMMRDT*GTSRPR Trigger: CCGGGGCCTGGATGTCCCTCAGGTGTCCCTCATCAT...TCTATTTAATGGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | TTATGTACATGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LCTCALEKMAEAEGLPEGPLAGP*CRTWGS Trigger: TGACCCCCACGTTCGACACCATGGGCCTGCGAGAGG...CCCCTCGGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACATGTACATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR GCA 90 bp | AGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCTGGATATCCAAGCACTaGAGCACTGAGACACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RWRRLRVFPRGSEKTVHIWISKH*STETLK Trigger: CTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCA...GATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | TTATGTACATGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCCATGGTGTCGAACGTaGGGGTCACGTCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCTCALEKMAEAEGLPEGPWCRT*GSRPPP Trigger: AGGAGGTGGACGTGACCCCCACGTTCGACACCATGG...CCCCTCGGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACATGTACATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR TCA 90 bp | ATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAAACTGCTCAATGTCCCTaGGAATCCGGATGTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: MAEAEGLPEGLREDSPYQTAQCP*ESGCHH Trigger: ATGATGACATCCGGATTCTCAGGGACATTGAGCAGT...TTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | AAAAGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATGCCAGGATCAAAGCTTaGGTTTCTCGAACCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: KRWRRLRVFPRGSEKTVHARIKA*VSRTWI Trigger: TATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGC...ATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | AGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCTCTCGTCTATCTGGGTaGAGTAGTACTGCTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: RWRRLRVFPRGSEKTVHISRLSG*SSTAQC Trigger: ACATTGAGCAGTACTACTCCACCCAGATAGACGAGA...GATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR TCA 90 bp | ATCGGATTATGTACATGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCGCAGCACTGAGACACTaGAGGTGGCCGTCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IGLCTCALEKMAEAEGLPAALRH*RWPSCL Trigger: CAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGC...GGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACATGTACATAATCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR TCA 90 bp | GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCATTAAATAGAATCTCCAGGATCTCATaGGGCAGTGTGGCGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: GSSRGAPRRQSISTPLNRISRIS*GSVALM Trigger: CATCAGCGCCACACTGCCTCATGAGATCCTGGAGAT...TCTATTTAATGGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR TCA 90 bp | CTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCATTAAAGATCTCCCAATTCTGTaGATGTACAGTTCTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LRVFPRGSEKTVHINPIKDLPIL*MYSSLL Trigger: CAACAGAGAACTGTACATTCACAGAATTGGGAGATC...TTTAATGGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CCA 90 bp | ATCGGATTATGTACATGTGCATTAGAAAAGATGGCGGAGGCTGAGGGTCTTCCCGACTCTCGTTCTTTCTaGGGCATGTCTCCATGCATG | + |
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Preference number: 4 (lower is better) Translates to: IGLCTCALEKMAEAEGLPDSRSF*GMSPCM Trigger: CATGCATGGAGACATGCCCCAGAAAGAACGAGAGTC...GGGAAGACCCTCAGCCTCCGCCATCTTTTCTAATGCACATGTACATAATCCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 90 bp | AACCGTAGGCGTAGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCACGTCCACCTCCTCGCTCGTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: NRRRRCRAAGPLAGP*CRTWGSRPPPRSSR Trigger: TCGAGACGAGCGAGGAGGTGGACGTGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCTACGCCTACGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CCA 90 bp | AGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATGGTGTCGAACGTaGGGGTCACGTCCACCTCCTCGCTCGTCTCGAACTCCACTTTGG | + |
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Preference number: 5 (lower is better) Translates to: RCRAAGPLAGPWCRT*GSRPPPRSSRTPLW Trigger: CCAAAGTGGAGTTCGAGACGAGCGAGGAGGTGGACGTGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS TCA 90 bp | CCTCCTCGCTCGTCTCGAACTCCACTTTGGTCATGTCCTCCTCTTTaGGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCCATCGTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: PPRSSRTPLWSCPPL*AAASAPSQTSPSWR Trigger: ACGCCACGATGGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGAGCGAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS-3UTR CAA 90 bp | AGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCATGTCCTCGCCGACGTaGGTGCCCCCAATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RWRRLRVFPRGSEKTVHIMSSPT*VPPMQA Trigger: TGCCTGCATTGGGGGCACCAACGTCGGCGAGGACAT...GATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS TCA 90 bp | GCCCCGGGCCCAGACGTCTGTGGAGATGAGCACCCGGCTGGCACCTaGCCGGAACTCCTTCATGATAGACTCTCGTTCTTTCTGGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: APGPDVCGDEHPAGT*PELLHDRLSFFLGH Trigger: ATGCCCCAGAAAGAACGAGAGTCTATCATGAAGGAGTTCCGGTCAGGTGCCAGCCGGGTGCTCATCTCCACAGACGTCTGGGCCCGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS GCA 90 bp | CGTGCTGTCCGTAGTCCAGCTTCCGGATGTCCTCGCCGACGTTGGTaGCCCCAATGCAGGCATGGCACTGCACGTTCATGTAATCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RAVRSPASGCPRRRW*PQCRHGTARSCNPP Trigger: TGGGGGATTACATGAACGTGCAGTGCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACATCCGGAAGCTGGACTACGGACAGCACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CCA 90 bp | CCACGTGCTGTCCGTAGTCCAGCTTCCGGATGTCCTCGCCGACGTTaGTGCCCCCAATGCAGGCATGGCACTGCACGTTCATGTAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRAVRSPASGCPRRR*CPQCRHGTARSCNP Trigger: GGGATTACATGAACGTGCAGTGCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACATCCGGAAGCTGGACTACGGACAGCACGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS GCA 90 bp | TCCGTAAACTTCTCCGGCGGATCATATCAAAGACGCGTCCCGGCGTaGCTGCCACCACGTGCTGTCCGTAGTCCAGCTTCCGGATGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SVNFSGGSYQRRVPA*LPPRAVRSPASGCP Trigger: AGGACATCCGGAAGCTGGACTACGGACAGCACGTGGTGGCAGGCACGCCGGGACGCGTCTTTGATATGATCCGCCGGAGAAGTTTACGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGATGGCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCAACCTTCCGCTTGGTGTaGCAGAAGATGACGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EKMAEAEGLPEGLREDSPTFRLV*QKMTAW Trigger: CCAGGCCGTCATCTTCTGCAACACCAAGCGGAAGGT...TGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGCCATCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 90 bp | CCCCCAGCGCGAGCAGACCCTTCTGAATCTGCACCGCTAACTCCCTaGTTGGAGCCAGGATCAAAGCTTGGGTTTCTCGAACCTGGATAT | + |
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Preference number: 5 (lower is better) Translates to: PPARADPSESAPLTP*LEPGSKLGFLEPGY Trigger: ATATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGTGCAGATTCAGAAGGGTCTGCTCGCGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCATTAAATAGAGTCATGTCCTCCTCTTaGAGCAGCCGCTTCCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GSSRGAPRRQSISTPLNRVMSSS*SSRFRA Trigger: GGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGAC...TCTATTTAATGGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CAA 90 bp | GCGGAGGCTGAGGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCTCGGTCATGAACTTGTaGGTCATCTCCAGGATCTCA | + |
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Preference number: 5 (lower is better) Translates to: AEAEGLPEGLREDSPYQPSVMNL*VISRIS Trigger: TGAGATCCTGGAGATGACCAACAAGTTCATGACCGA...GGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCCTCAGCCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS TCA 90 bp | CAAAGCTTGGGTTTCTCGAACCTGGATATCCAAGCACTGCAGCACTaGGACACTGAAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: QSLGFSNLDIQALQH*DTEGGRLACARLRL Trigger: CAGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTCGAGAAACCCAAGCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS-3UTR CAA 90 bp | GGGTCTTCCCGAGGGGCTCCGAGAAGACAGTCCATATCAACCCCATTAAATAGACCGCTAACTCCCTGGTaGGAGCCAGGATCAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: GSSRGAPRRQSISTPLNRPLTPW*EPGSKL Trigger: AAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGG...TCTATTTAATGGGGTTGATATGGACTGTCTTCTCGGAGCCCCTCGGGAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 72 bp | CGTAGATGCCGCGCAGCAGGTCCTCTCGCAGGCCCATaGTGTCGAACGTGGGGGTCACGTCCACCTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRCRAAGPLAGP*CRTWGSRPPPR Trigger: GCGAGGAGGTGGACGTGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCTACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS TCA 72 bp | GGACATCCAGGCCCCGGGCCCAGACGTCTGTGGAGATaGGCACCCGGCTGGCACCTGACCGGAACTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GHPGPGPRRLWR*APGWHLTGTPS Trigger: TGAAGGAGTTCCGGTCAGGTGCCAGCCGGGTGCTCATCTCCACAGACGTCTGGGCCCGGGGCCTGGATGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 72 bp | GCAGCAGGTCCTCTCGCAGGCCCATGGTGTCGAACGTaGGGGTCACGTCCACCTCCTCGCTCGTCTCGAACT | + |
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Preference number: 6 (lower is better) Translates to: AAGPLAGPWCRT*GSRPPPRSSRT Trigger: AGTTCGAGACGAGCGAGGAGGTGGACGTGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS GCA 72 bp | CCGGCGGATCATATCAAAGACGCGTCCCGGCGTGCCTaGCACCACGTGCTGTCCGTAGTCCAGCTTCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: PADHIKDASRRA*HHVLSVVQLPD Trigger: ATCCGGAAGCTGGACTACGGACAGCACGTGGTGGCAGGCACGCCGGGACGCGTCTTTGATATGATCCGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CAA 90 bp | ACCTCCTCGCTCGTCTCGAACTCCACTTTGGTCATGTCCTCCTCTTaGAGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCCATCGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TSSLVSNSTLVMSSS*SSRFRAEPDVAIVA Trigger: CGCCACGATGGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGAGCGAGGAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CAA 90 bp | AACGTGGGGGTCACGTCCACCTCCTCGCTCGTCTCGAACTCCACTTaGGTCATGTCCTCCTCTTTGAGCAGCCGCTTCCGCGCCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: NVGVTSTSSLVSNST*VMSSSLSSRFRAEP Trigger: TGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGAGCGAGGAGGTGGACGTGACCCCCACGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS GCA 72 bp | TTCTCCGGCGGATCATATCAAAGACGCGTCCCGGCGTaGCTGCCACCACGTGCTGTCCGTAGTCCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSGGSYQRRVPA*LPPRAVRSPAS Trigger: GGAAGCTGGACTACGGACAGCACGTGGTGGCAGGCACGCCGGGACGCGTCTTTGATATGATCCGCCGGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CCA 72 bp | GTCCGTAGTCCAGCTTCCGGATGTCCTCGCCGACGTTaGTGCCCCCAATGCAGGCATGGCACTGCACGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VRSPASGCPRRR*CPQCRHGTARS Trigger: TGAACGTGCAGTGCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACATCCGGAAGCTGGACTACGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS CAA 72 bp | CTCGTCTCGAACTCCACTTTGGTCATGTCCTCCTCTTaGAGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LVSNSTLVMSSS*SSRFRAEPDVA Trigger: GGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS TCA 72 bp | TCGTCTCGAACTCCACTTTGGTCATGTCCTCCTCTTTaGGCAGCCGCTTCCGCGCCGAGCCAGACGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSRTPLWSCPPL*AAASAPSQTSP Trigger: TGGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS GCA 72 bp | CGTAGTCCAGCTTCCGGATGTCCTCGCCGACGTTGGTaGCCCCAATGCAGGCATGGCACTGCACGTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: RSPASGCPRRRW*PQCRHGTARSC Trigger: ACATGAACGTGCAGTGCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACATCCGGAAGCTGGACTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS GCA 72 bp | TCCCCCAGCGCGAGCAGACCCTGGATATCCAAGCACTaGAGCACTGAGACACTGAAGGTGGCCGTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPSASRPWISKH*STETLKVAVLP Trigger: AGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGGTCTGCTCGCGCTGGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106253.2 |
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| CDS CAA 72 bp | GTCACGTCCACCTCCTCGCTCGTCTCGAACTCCACTTaGGTCATGTCCTCCTCTTTGAGCAGCCGCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: VTSTSSLVSNST*VMSSSLSSRFR Trigger: GCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGAGTTCGAGACGAGCGAGGAGGTGGACGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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| CDS TCA 72 bp | GACCCTGGATATCCAAGCACTGCAGCACTGAGACACTaGAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: DPGYPSTAALRH*RWPSCLCQTET Trigger: AGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106253.2 |
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| CDS CAA 90 bp | CCAGCGCGAGCAGACCCTTCTGAATCTGCACCGCTAACTCCCTGGTaGGAGCCAGGATCAAAGCTTGGGTTTCTCGAACCTGGATATCCA | + |
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Preference number: 6 (lower is better) Translates to: PARADPSESAPLTPW*EPGSKLGFLEPGYP Trigger: TGGATATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGTGCAGATTCAGAAGGGTCTGCTCGCGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS TCA 72 bp | GAACCTGGATATCCAAGCACTGCAGCACTGAGACACTaGAGGTGGCCGTCTTGCCTGTGCCAGACTGAGACT | + |
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Preference number: 6 (lower is better) Translates to: EPGYPSTAALRH*RWPSCLCQTET Trigger: AGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS TCA 72 bp | GGTTTCTCGAACCTGGATATCCAAGCACTGCAGCACTaGGACACTGAAGGTGGCCGTCTTGCCTGTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GFSNLDIQALQH*DTEGGRLACAR Trigger: TCTGGCACAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTCGAGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS TCA 72 bp | CCAGACGTCTGTGGAGATGAGCACCCGGCTGGCACCTaGCCGGAACTCCTTCATGATAGACTCTCGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PDVCGDEHPAGT*PELLHDRLSFF Trigger: AAAGAACGAGAGTCTATCATGAAGGAGTTCCGGTCAGGTGCCAGCCGGGTGCTCATCTCCACAGACGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 72 bp | ACCGCTAACTCCCTGGTTGGAGCCAGGATCAAAGCTTaGGTTTCTCGAACCTGGATATCCAAGCACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TANSLVGARIKA*VSRTWISKHCS Trigger: GCTGCAGTGCTTGGATATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 72 bp | CGAGCAGACCCTTCTGAATCTGCACCGCTAACTCCCTaGTTGGAGCCAGGATCAAAGCTTGGGTTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: RADPSESAPLTP*LEPGSKLGFLE Trigger: TTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGTGCAGATTCAGAAGGGTCTGCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CAA 72 bp | GCAGACCCTTCTGAATCTGCACCGCTAACTCCCTGGTaGGAGCCAGGATCAAAGCTTGGGTTTCTCGAACCT | + |
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Preference number: 6 (lower is better) Translates to: ADPSESAPLTPW*EPGSKLGFLEP Trigger: AGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGTGCAGATTCAGAAGGGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS GCA 72 bp | AAAGCTTGGGTTTCTCGAACCTGGATATCCAAGCACTaGAGCACTGAGACACTGAAGGTGGCCGTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KAWVSRTWISKH*STETLKVAVLP Trigger: AGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTCGAGAAACCCAAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS CCA 72 bp | GTTGGAGCCAGGATCAAAGCTTGGGTTTCTCGAACCTaGATATCCAAGCACTGCAGCACTGAGACACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VGARIKAWVSRT*ISKHCSTETLK Trigger: CTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTCGAGAAACCCAAGCTTTGATCCTGGCTCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026667.15 |
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| CDS GCA 72 bp | ATGATAGACTCTCGTTCTTTCTGGGGCATGTCTCCATaGATGGACGACACAGTGAAATTGGCTTCTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: MIDSRSFWGMSP*MDDTVKLASLI Trigger: AATGAGAGAAGCCAATTTCACTGTGTCGTCCATGCATGGAGACATGCCCCAGAAAGAACGAGAGTCTATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026667.15 ENSMUST00000106253.2 |
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