Pregenerated sensors for EIF4A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022884Ensembl transcript IDs: ENSMUST00000077605.12, ENSMUST00000147117.8, ENSMUST00000168891.8
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGATAGTGCCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATaGGATAGGCGCCTTGAGCATTACAATAAAGCAGATGACAGTATT | + |
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Preference number: 1 (lower is better) Translates to: QIVPPKEFKACLAAK*DRRLEHYNKADDSI Trigger: AATACTGTCATCTGCTTTATTGTAATGCTCAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGGCACTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR GCA 90 bp | TATTTAAAGCTACTGAATATGACGATCCACTTGTTAACCATCAGCTaGTGTTTACTTATCAGGATTATAGTTCGTGCTTTTAAGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: YLKLLNMTIHLLTIS*CLLIRIIVRAFKWS Trigger: GCTCCACTTAAAAGCACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTTTGTGCAACTGTGATGCAGCAGCTAACTCAGAACTGTTAGAGGCTTCAACCAAGGACACTTGTTaGACGTCAATCCCACGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EPLCNCDAAANSELLEASTKDTC*TSIPRA Trigger: GGCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGT...TGAAGCCTCTAACAGTTCTGAGTTAGCTGCTGCATCACAGTTGCACAAAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147117.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATGAGATAGGCGCCTTGAAGCCCATACCAAAGTaGGCCAGCCAGGAGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: CHQKNSRLVWLQNEIGALKPIPK*ASQEQL Trigger: CAACTGCTCCTGGCTGGCCCACTTTGGTATGGGCTT...CAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATGAGATAGGCGCCTTGGAGCAGTTGTCAGCCTaGGACAAATGTAAACACCAG | + |
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Preference number: 2 (lower is better) Translates to: CHQKNSRLVWLQNEIGALEQLSA*DKCKHQ Trigger: CTGGTGTTTACATTTGTCCCAGGCTGACAACTGCTC...CAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR TCA 90 bp | GCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGCGTCAACGCCGTTTCTaGGTGCCATCTCGTCATCAA | + |
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Preference number: 2 (lower is better) Translates to: ATEYDDPLVNHQLLFTYQRQRRF*VPSRHQ Trigger: TTGATGACGAGATGGCACTCAGAAACGGCGTTGACG...CTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR GCA 90 bp | ACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGATTATAGTTCGTAACGCCGTTTCTGAGTaGCATCTCGTCATCAACTGC | + |
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Preference number: 2 (lower is better) Translates to: TIHLLTISCCLLIRIIVRNAVSE*HLVINC Trigger: GCAGTTGATGACGAGATGGCACTCAGAAACGGCGTT...ACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR GCA 90 bp | GTTATACAATCCATTTCGACGCACTTCTGGAACTGTAAATACAAATGCTGCAAGCTTATCACTGCTTTTTaGTCAGCTTCTTTTCACACG | + |
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Preference number: 2 (lower is better) Translates to: VIQSISTHFWNCKYKCCKLITAF*SASFHT Trigger: CGTGTGAAAAGAAGCTGAGCAAAAAGCAGTGATAAG...CTTGCAGCATTTGTATTTACAGTTCCAGAAGTGCGTCGAAATGGATTGTATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR GCA 90 bp | ACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGATTATAGTTCGTACCCAAACTTATCACTaGTTTTTGCTCAGCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TIHLLTISCCLLIRIIVRTQTYH*FLLSFF Trigger: AAAGAAGCTGAGCAAAAAGCAGTGATAAGTTTGGGT...ACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CCA 90 bp | ACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGATTATAGTTCGTAAACCAATATCCAGGTaGAAAAACATCTTCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: TIHLLTISCCLLIRIIVRKPISR*KNIFLC Trigger: GCAAAGGAAGATGTTTTTCCACCTGGATATTGGTTT...ACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CCA 90 bp | CAGTTATACAATCCATTTCGACGCACTTCTGGAACTGTAAATACAAATGCTGCAGTGAAAGCAAGTATTTaGTATGGTAACCCAAACTTA | + |
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Preference number: 2 (lower is better) Translates to: QLYNPFRRTSGTVNTNAAVKASI*YGNPNL Trigger: TAAGTTTGGGTTACCATACCAAATACTTGCTTTCAC...TGCAGCATTTGTATTTACAGTTCCAGAAGTGCGTCGAAATGGATTGTATAACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATTTTATTCAAACAGTGTaGTGTTTCGCTTATGATTCC | + |
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Preference number: 2 (lower is better) Translates to: KATEYDDPLVNHQLLFTYFIQTV*CFAYDS Trigger: GGAATCATAAGCGAAACAGCACACTGTTTGAATAAA...ATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CAA 90 bp | GCAGATGGTGCAGATGAACACCTGCAGTTGATGAGCCTTTGTGCAACTGTGATGAACCAAGGACACTTGTaGCACGTCAATCCCACGGGC | + |
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Preference number: 3 (lower is better) Translates to: ADGADEHLQLMSLCATVMNQGHL*HVNPTG Trigger: GCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGTT...CATCACAGTTGCACAAAGGCTCATCAACTGCAGGTGTTCATCTGCACCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147117.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGATGGTGCAGATGAACACCTGCAGTTGATGAGCCTTTGTGCAACTGTGATGTATAACCAAGGACACTaGTTGCACGTCAATCCCACG | + |
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Preference number: 3 (lower is better) Translates to: ADGADEHLQLMSLCATVMYNQGH*LHVNPT Trigger: CGTGGGATTGACGTGCAACAAGTGTCCTTGGTTATA...CATCACAGTTGCACAAAGGCTCATCAACTGCAGGTGTTCATCTGCACCATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147117.8 |
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| 3UTR TCA 72 bp | CCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATaGGATAGGCGCCTTGAGCATTACAATAAAGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: PPKEFKACLAAK*DRRLEHYNKAD Trigger: ATCTGCTTTATTGTAATGCTCAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CAA 90 bp | CAGTTATACAATCCATTTCGACGCACTTCTGGAACTGTAAATACAAATGCTGCAACTTATCACTGCTTTTaGCTCAGCTTCTTTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: QLYNPFRRTSGTVNTNAATYHCF*LSFFSH Trigger: GTGTGAAAAGAAGCTGAGCAAAAAGCAGTGATAAGT...TGCAGCATTTGTATTTACAGTTCCAGAAGTGCGTCGAAATGGATTGTATAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATAAAAGAATTCAAGGCTaGTCTGGCTGCAAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: KATEYDDPLVNHQLLFTYKRIQG*SGCKMR Trigger: TCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTT...ATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR GCA 72 bp | CTACTGAATATGACGATCCACTTGTTAACCATCAGCTaGTGTTTACTTATCAGGATTATAGTTCGTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LLNMTIHLLTIS*CLLIRIIVRAF Trigger: AAAAGCACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR GCA 90 bp | GCAGATGGTGCAGATGAACACCTGCAGTTGATGAGCCTTTGTGCAACTGTGATGACCAAGGACACTTGTTaGACGTCAATCCCACGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ADGADEHLQLMSLCATVMTKDTC*TSIPRA Trigger: GGCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGT...CATCACAGTTGCACAAAGGCTCATCAACTGCAGGTGTTCATCTGCACCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168891.8 |
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| CDS-3UTR CCA 90 bp | TGCCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATGAGATAGGCGCCTTGGCCAATACTAGTGCTTaGGTCTCCTTGAACTCAATC | + |
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Preference number: 4 (lower is better) Translates to: CHQKNSRLVWLQNEIGALANTSA*VSLNSI Trigger: GATTGAGTTCAAGGAGACCCAAGCACTAGTATTGGC...CAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR GCA 90 bp | AAAGCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATACCAAGGACACTTGTTaGACGTCAATCCCACGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KATEYDDPLVNHQLLFTYTKDTC*TSIPRA Trigger: GGCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGT...ATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR TCA 90 bp | GCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGTGCTTGGGTCTCCTTaGACTCAATCTCCAACTGTT | + |
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Preference number: 4 (lower is better) Translates to: ATEYDDPLVNHQLLFTYQVLGSP*TQSPTV Trigger: AACAGTTGGAGATTGAGTTCAAGGAGACCCAAGCAC...CTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR CAA 72 bp | TCAAGGCTTGTCTGGCTGCAAAATGAGATAGGCGCCTaGAGCATTACAATAAAGCAGATGACAGTATTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SRLVWLQNEIGA*SITIKQMTVLC Trigger: ACACAATACTGTCATCTGCTTTATTGTAATGCTCAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR GCA 90 bp | TTGTGCAACTGTGATGCAGCAGCTAACTCAGAACTGTTAGAGGCTTCATCTCTCTCAGCCTGCAACTTCTaGATTTCATTTCGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: LCNCDAAANSELLEASSLSACNF*ISFRTF Trigger: AAATGTTCGAAATGAAATGCAGAAGTTGCAGGCTGA...GAGAGATGAAGCCTCTAACAGTTCTGAGTTAGCTGCTGCATCACAGTTGCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168891.8 |
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| CDS-3UTR GCA 90 bp | ACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGATTATAGTTCGTTCAGCCTGCAACTTCTaGATTTCATTTCGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: TIHLLTISCCLLIRIIVRSACNF*ISFRTF Trigger: AAATGTTCGAAATGAAATGCAGAAGTTGCAGGCTGA...ACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| 3UTR CAA 72 bp | TCACTCCCTATCAGAAATGCTAACATACAAAATGCCTaGGGCTGGAACAACTTAAAATATCAAATAATCATG | + |
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Preference number: 4 (lower is better) Translates to: SLPIRNANIQNA*GWNNLKYQIIM Trigger: CATGATTATTTGATATTTTAAGTTGTTCCAGCCCAAGGCATTTTGTATGTTAGCATTTCTGATAGGGAGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR CAA 90 bp | TGCCACCAAAAGAATTCAAGGCTTGTCTGGCTGCAAAATGAGATAGGCGCCTTGAACCAAGGACACTTGTaGCACGTCAATCCCACGGGC | + |
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Preference number: 5 (lower is better) Translates to: CHQKNSRLVWLQNEIGALNQGHL*HVNPTG Trigger: GCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGTT...CAAGGCGCCTATCTCATTTTGCAGCCAGACAAGCCTTGAATTCTTTTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR CAA 90 bp | TTGTGCAACTGTGATGCAGCAGCTAACTCAGAACTGTTAGAGGCTTCATCTCTCAACCAAGGACACTTGTaGCACGTCAATCCCACGGGC | + |
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Preference number: 5 (lower is better) Translates to: LCNCDAAANSELLEASSLNQGHL*HVNPTG Trigger: GCCCGTGGGATTGACGTGCAACAAGTGTCCTTGGTT...GAGAGATGAAGCCTCTAACAGTTCTGAGTTAGCTGCTGCATCACAGTTGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168891.8 |
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| CDS-3UTR CAA 90 bp | ACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATCAGGATTATAGTTCGTAGTGCTTGGGTCTCCTaGAACTCAATCTCCAACTGT | + |
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Preference number: 5 (lower is better) Translates to: TIHLLTISCCLLIRIIVRSAWVS*NSISNC Trigger: ACAGTTGGAGATTGAGTTCAAGGAGACCCAAGCACT...ACGAACTATAATCCTGATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR CAA 90 bp | GTTATACAATCCATTTCGACGCACTTCTGGAACTGTAAATACAAATGCTGCAAGTATAACCAAGGACACTaGTTGCACGTCAATCCCACG | + |
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Preference number: 5 (lower is better) Translates to: VIQSISTHFWNCKYKCCKYNQGH*LHVNPT Trigger: CGTGGGATTGACGTGCAACAAGTGTCCTTGGTTATA...CTTGCAGCATTTGTATTTACAGTTCCAGAAGTGCGTCGAAATGGATTGTATAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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| CDS-3UTR CAA 90 bp | AAAGCTACTGAATATGACGATCCACTTGTTAACCATCAGCTGCTGTTTACTTATAGCCAAAATTACCTTTaGGATCTGTTGAGCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: KATEYDDPLVNHQLLFTYSQNYL*DLLSQF Trigger: GAACTGGCTCAACAGATCCAAAAGGTAATTTTGGCT...ATAAGTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077605.12 |
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