Pregenerated sensors for EIF3K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053565Ensembl transcript IDs: ENSMUST00000208616.2, ENSMUST00000208707.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACGGCTGTCACTGCCTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCAACTACCTTATGGTaGGACCAAATGACTCATCGA | + |
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Preference number: 2 (lower is better) Translates to: TAVTAFHSAPGSLYTRRQATTLW*DQMTHR Trigger: TCGATGAGTCATTTGGTCCCACCATAAGGTAGTTGC...CTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAGGCAGTGACAGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| 3UTR-3UTR TCA 90 bp | AGATCTGCCGGATGGGCCGCTCTTCTTGATGTGCCTGGTCGATCATACATTTACGCAGAATCTGGGCAGTaGCTGTGGTCTGGAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RSAGWAALLDVPGRSYIYAESGQ*LWSGRR Trigger: CCTTCTTCCAGACCACAGTCACTGCCCAGATTCTGC...GTAAATGTATGATCGACCAGGCACATCAAGAAGAGCGGCCCATCCGGCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCCTGGTCGATCATACATTTACACAGAGTGAAGTCGGTGTGGGGCAGGTTAAGGCTGGGTTGAACTaGTACCTTCTAAAACACCGA | + |
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Preference number: 2 (lower is better) Translates to: MCLVDHTFTQSEVGVGQVKAGLN*YLLKHR Trigger: TCGGTGTTTTAGAAGGTACCAGTTCAACCCAGCCTT...AACCTGCCCCACACCGACTTCACTCTGTGTAAATGTATGATCGACCAGGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| 3UTR GCA 72 bp | AAATGTGACAGGAACGGCTGTCACTGCCTTTCACTCTaGGCCTGGCTCTCTCTACACGAGGAGGCAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: KCDRNGCHCLSL*AWLSLHEEAGT Trigger: AGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAGGCAGTGACAGCCGTTCCTGTCACATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGCCTGGTCGATCATACATTTACACAGAGTGAAGTCGGTGTGGGGCAGGTTGTGGAAGAAGGCTGGGTaGAACTGGTACCTTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CAWSIIHLHRVKSVWGRLWKKAG*NWYLLK Trigger: TTTTAGAAGGTACCAGTTCAACCCAGCCTTCTTCCA...CAACCTGCCCCACACCGACTTCACTCTGTGTAAATGTATGATCGACCAGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| 3UTR TCA 72 bp | TTAGAACAAGAGCAACTACCTTATGGTGGGACCAAATaGCTCATCGAGAGCCACAGCCCTGAGTGGACAAGT | + |
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Preference number: 3 (lower is better) Translates to: LEQEQLPYGGTK*LIESHSPEWTS Trigger: ACTTGTCCACTCAGGGCTGTGGCTCTCGATGAGTCATTTGGTCCCACCATAAGGTAGTTGCTCTTGTTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | TTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCCGATGTGCTGGTACGTaGTGCCCACCACGTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FHSAPGSLYTRRQALCQFRCAGT*CPPRGR Trigger: TCTGCCACGTGGTGGGCATCACGTACCAGCACATCG...GAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAAGCCAGCGGTCGATGTaGTGGTACGTGATGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LCAWLSLHEEAGTVPVLISQRSM*WYVMPT Trigger: GGTGGGCATCACGTACCAGCACATCGACCGCTGGCT...TATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR GCA 90 bp | CTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTGCAGATGAAGACCTaGCCTGACTCGTCAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLCAWLSLHEEAGTVPVLQMKT*PDSSAL Trigger: GAGCGCTGACGAGTCAGGGCAGGTCTTCATCTGCAG...AACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | GAACGGCTGTCACTGCCTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCGGAAGAAGGCTGGGTTaGACTGGTACCTGTCGATAC | + |
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Preference number: 4 (lower is better) Translates to: ERLSLPFTLRLALSTRGGGRRLG*TGTCRY Trigger: GTATCGACAGGTACCAGTTCAACCCAGCCTTCTTCC...GCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAGGCAGTGACAGCCGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATACCGAGGTACAAGATCTaGCGGATGGGCCGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LCAWLSLHEEAGTVPVLIPRYKI*RMGRSS Trigger: AGAAGAGCGGCCCATCCGGCAGATCTTGTACCTCGG...TATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | TGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGGATGAAGACCTGCCCTaGCTCGTCAGCGCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: WLSLHEEAGTVPVLIVSKDEDLP*LVSAPA Trigger: GGCTGGAGCGCTGACGAGTCAGGGCAGGTCTTCATC...CTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCCCTCTGCACCAGGTTCCCTCTCCAGAGTGGCTTCCTGCTAGGCAGCCATAGGCATTCTCTTTaGCTTGTGTCTCCACATATC | + |
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Preference number: 4 (lower is better) Translates to: PRPLCTRFPLQSGFLLGSHRHSL*LVSPHI Trigger: GATATGTGGAGACACAAGCCAAAGAGAATGCCTATG...GCTGCCTAGCAGGAAGCCACTCTGGAGAGGGAACCTGGTGCAGAGGGGCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| CDS-3UTR CCA 90 bp | CTTATGGTGGGACCAAATGACTCATCGAGAGCCACAGCCCTGAGTGGACAAGTCCAGCGGTCGATGTGCTaGTACGTGATGCCCACCACG | + |
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Preference number: 4 (lower is better) Translates to: LMVGPNDSSRATALSGQVQRSMC*YVMPTT Trigger: CGTGGTGGGCATCACGTACCAGCACATCGACCGCTG...GACTTGTCCACTCAGGGCTGTGGCTCTCGATGAGTCATTTGGTCCCACCATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | AAATGTGACAGGAACGGCTGTCACTGCCTTTCACTCTGCGCCTGGCTCTCTCTAGCAGAATCTGGGCAGTaGCTGTGGTCTGGAAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KCDRNGCHCLSLCAWLSLAESGQ*LWSGRR Trigger: CCTTCTTCCAGACCACAGTCACTGCCCAGATTCTGC...TAGAGAGAGCCAGGCGCAGAGTGAAAGGCAGTGACAGCCGTTCCTGTCACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGAGTTTGAGGCCAGTCTaGTTGTCAAAGTCAATCTTC | + |
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Preference number: 4 (lower is better) Translates to: AFHSAPGSLYTRRQALCQSLRPV*LSKSIF Trigger: GAAGATTGACTTTGACAACCAGACTGGCCTCAAACT...CTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | AGATCTGCCGGATGGGCCGCTCTTCTTGATGTGCCTGGTCGATCATACATTTACACCTGTCGATACCCTTaGGCAACTTGCCCACGTTCG | + |
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Preference number: 4 (lower is better) Translates to: RSAGWAALLDVPGRSYIYTCRYP*ATCPRS Trigger: CGAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGT...GTAAATGTATGATCGACCAGGCACATCAAGAAGAGCGGCCCATCCGGCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| CDS-3UTR CCA 90 bp | TGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTAAGGCTGGGTTGAACTaGTACCTGTCGATACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CAWLSLHEEAGTVPVLIVKAGLN*YLSIPL Trigger: CAAGGGTATCGACAGGTACCAGTTCAACCCAGCCTT...AACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | GCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGTTACCTGTCGATACCCTTaGGCAACTTGCCCACGTTCG | + |
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Preference number: 4 (lower is better) Translates to: ALSTRGGRHCASSNSFQVTCRYP*ATCPRS Trigger: CGAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGT...AACTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGATCCACACCTTCAGCTaGTTGTCAGTCAGGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: WLSLHEEAGTVPVLIVSKIHTFS*LSVRSP Trigger: CGGAGACCTGACTGACAACCAGCTGAAGGTGTGGAT...CTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGTTAGAGGTAGGTAGAGTTTaGGGCCAGTCTGGTTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSLHEEAGTVPVLIVSKLEVGRV*GQSGCQ Trigger: TTGACAACCAGACTGGCCTCAAACTCTACCTACCTC...TAACTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGTTAGAACAAGAGCAAACAAGATCTGCCGGATaGGCCGCTCTTCTTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: EEAGTVPVLIVSKLEQEQTRSAG*AALLDV Trigger: CACATCAAGAAGAGCGGCCCATCCGGCAGATCTTGT...TTGCTCTTGTTCTAACTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCTGCACCAGGTTCCCTCTCCAGAGTGGCTTCCTGCTAGGCAGCTGTTCGATACCCTTGAGCAACTaGCCCACGTTCGCTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: PLCTRFPLQSGFLLGSCSIPLSN*PTFALI Trigger: GATGAGAGCGAACGTGGGCAAGTTGCTCAAGGGTAT...CGAACAGCTGCCTAGCAGGAAGCCACTCTGGAGAGGGAACCTGGTGCAGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| CDS-3UTR CAA 90 bp | CTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTATACCCTTGAGCAACTaGCCCACGTTCGCTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: LSLCAWLSLHEEAGTVPVIPLSN*PTFALI Trigger: GATGAGAGCGAACGTGGGCAAGTTGCTCAAGGGTAT...AACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | TGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATAGTTTCCAAGTCGGTGTGGGGCAGGTaGGTGAGGGCTTTCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: WLSLHEEAGTVPVLIVSKSVWGR*VRAFSR Trigger: TCTGCTGAAAGCCCTCACCAACCTGCCCCACACCGA...CTTGGAAACTATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | ACGGCTGTCACTGCCTTTCACTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGTTGAGGCCAGTCTGGTaGTCAAAGTCAATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TAVTAFHSAPGSLYTRRQLRPVW*SKSIFS Trigger: GGAGAAGATTGACTTTGACAACCAGACTGGCCTCAA...CTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAGTGAAAGGCAGTGACAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | CTTATGGTGGGACCAAATGACTCATCGAGAGCCACAGCCCTGAGTGGACAAGTCGATGGGCCGCTCTTCTaGATGTGCCTGGTCGATCAT | + |
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Preference number: 5 (lower is better) Translates to: LMVGPNDSSRATALSGQVDGPLF*MCLVDH Trigger: ATGATCGACCAGGCACATCAAGAAGAGCGGCCCATC...GACTTGTCCACTCAGGGCTGTGGCTCTCGATGAGTCATTTGGTCCCACCATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCGCCTGGCTCTCTCTACACGAGGAGGCAGGCACTGTGCCAGTTCTAATATGGAAGAAGGCTGGGTaGAACTGGTACCTGTCGATA | + |
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Preference number: 5 (lower is better) Translates to: LCAWLSLHEEAGTVPVLIWKKAG*NWYLSI Trigger: TATCGACAGGTACCAGTTCAACCCAGCCTTCTTCCA...TATTAGAACTGGCACAGTGCCTGCCTCCTCGTGTAGAGAGAGCCAGGCGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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| CDS-3UTR CAA 90 bp | AAGGCTGGGTTGAACTGGTACCTTCTAAAACACCGAAGAGAAGTCCCATCTTGCGGCATTCTCTTTGGCTaGTGTCTCCACATATCGCTC | + |
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Preference number: 5 (lower is better) Translates to: KAGLNWYLLKHRREVPSCGILFG*CLHISL Trigger: GAGCGATATGTGGAGACACAAGCCAAAGAGAATGCC...GCAAGATGGGACTTCTCTTCGGTGTTTTAGAAGGTACCAGTTCAACCCAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208707.2 |
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| CDS-3UTR CAA 90 bp | GATAAGACTGTTTATTCAAAATGTGACAGGAACGGCTGTCACTGCCTTTCACTCTTCTCCACGATGTTCTaGGGCTTAATGCTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: DKTVYSKCDRNGCHCLSLFSTMF*GLMLSS Trigger: GGAAGAGAGCATTAAGCCCAAGAACATCGTGGAGAA...GAGTGAAAGGCAGTGACAGCCGTTCCTGTCACATTTTGAATAAACAGTCTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208616.2 |
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