Pregenerated sensors for EIF3H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022312Ensembl transcript IDs: ENSMUST00000022925.10
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTCCCCACCATTGCTTTGCAGCACAGAAATGAGTTTTTCCAAGTaGACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: ASPPLLCSTEMSFSK*TLWPLNSLSTQRLL Trigger: GAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCACTTGGAAAAACTCATTTCTGTGCTGCAAAGCAATGGTGGGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| 3UTR-3UTR CCA 90 bp | GAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCTCCAAGTGCACTCTGTaGCCTCTCAACAGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: EQPIKVLLLARNHYSSRGSKCTL*PLNSLS Trigger: AGACAGACTGTTGAGAGGCCACAGAGTGCACTTGGA...GCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| 3UTR-3UTR TCA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCTTTGCAGCACAGAAATaGGTTTTTCCAAGTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: QLKFYYWLETTTAVAALRFAAQK*VFPSAL Trigger: GAGTGCACTTGGAAAAACTCATTTCTGTGCTGCAAA...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTGCAGTGAATCCATCCTaGCAGGGGCCTGGTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEAAVNPS*QGPGGA Trigger: AGCCCCACCAGGCCCCTGCCAGGATGGATTCACTGC...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTATCCTGGCAGGGGCCTaGTGGGGCTTGAAGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEAILAGA*WGLKSL Trigger: TAAACTCTTCAAGCCCCACCAGGCCCCTGCCAGGAT...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| 3UTR CAA 72 bp | CCACTACAGCAGTCGCGGCACTGCGCCTCCCCACCATaGCTTTGCAGCACAGAAATGAGTTTTTCCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PLQQSRHCASPP*LCSTEMSFSKC Trigger: GCACTTGGAAAAACTCATTTCTGTGCTGCAAAGCAATGGTGGGGAGGCGCAGTGCCGCGACTGCTGTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | TTGCAGCACAGAAATGAGTTTTTCCAAGTGCACTCTGTGGCCTCTCAACAGTCTCTCCGGAGCCGCCTTTaGCTTTGCCCTTCCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: LQHRNEFFQVHSVASQQSLRSRL*LCPSPP Trigger: CGGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAG...AGACTGTTGAGAGGCCACAGAGTGCACTTGGAAAAACTCATTTCTGTGCTGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTTGTTTCTGCTGCTGCTaGTTACTGGTGTTGCGCATG | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEACFCCC*LLVLRM Trigger: CATGCGCAACACCAGTAAGCAGCAGCAGCAGAAACA...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCGTCCTCCTCAGGGAGTaGGGGCTCGCCTCGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: QLKFYYWLETTTAVAALRVLLRE*GLASTL Trigger: CAGAGTCGAGGCGAGCCCCCACTCCCTGAGGAGGAC...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | TTGCAGCACAGAAATGAGTTTTTCCAAGTGCACTCTGTGGCCTCTCAACAGTCTGCCTGCAATGAGCAGTaGATCCATCCTGGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LQHRNEFFQVHSVASQQSACNEQ*IHPGRG Trigger: GCCCCTGCCAGGATGGATTCACTGCTCATTGCAGGC...AGACTGTTGAGAGGCCACAGAGTGCACTTGGAAAAACTCATTTCTGTGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | TTGCAGCACAGAAATGAGTTTTTCCAAGTGCACTCTGTGGCCTCTCAACAGTCTGCATCATCCTCCGTGTaGTGGGGGAACGGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQHRNEFFQVHSVASQQSASSSV*WGNGKQ Trigger: CTGCTTCCCGTTCCCCCAGCACACGGAGGATGATGC...AGACTGTTGAGAGGCCACAGAGTGCACTTGGAAAAACTCATTTCTGTGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTCGCATCATCTCCATCTaGTACTGTACCTCATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEARIISI*YCTSSK Trigger: CTTTGATGAGGTACAGTATCAGATGGAGATGATGCG...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTCCTGAACAACCTCAGTaGCTTGTCCTTCTTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEAPEQPQ*LVLLLD Trigger: ATCAAGAAGAAGGACAAGGCACTGAGGTTGTTCAGG...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | AGTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCAGCGAGAGAGATCCTTaGGCAGTTTTTATGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: SALCGLSTVCLLNAFSGGSERDP*AVFMGS Trigger: TGATCCCATAAAAACTGCCCAAGGATCTCTCTCGCT...GCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | AGTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCAGTTTGCCTAAGTTTTaGGCAGTGAACTCCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SALCGLSTVCLLNAFSGGSLPKF*AVNSLM Trigger: CATCAAGGAGTTCACTGCCCAAAACTTAGGCAAACT...GCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | GCAACTGAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTAGCCGCCTTTGCCTTTaGCCTTCCCCACCGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ATEQPIKVLLLARNHYSSSRLCL*PSPPRR Trigger: GCGGCGCGGTGGGGAAGGGCAAAGGCAAAGGCGGCT...ACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTTGTACGTGTTGTATTTaGTTATGTCCTGGCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: VHSVASQQSVYSTPSQEACTCCI*LCPGSF Trigger: AAATGAGCCAGGACATAATCAAATACAACACGTACA...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | CAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGGAGGTGATCAATGTTaGCATGGCGAAGGCTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QPIKVLLLARNHYSSRGTGGDQC*HGEGCA Trigger: TGCGCAGCCTTCGCCATGTCAACATTGATCACCTCC...AGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCTGGCGTGCTGGTAGCTaGACTGAGAATCCAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: EQPIKVLLLARNHYSSRGWRAGS*TENPEA Trigger: CGCTTCTGGATTCTCAGTTCAGCTACCAGCACGCCA...GCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCCTTATCCGCCACAGCTaGCTTCTTCTCAAGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLKFYYWLETTTAVAALRLIRHS*LLLKFP Trigger: TGGGAACTTGAGAAGAAGTCAGCTGTGGCGGATAAG...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCAGGAGCCGTAATATGTaGACTGATACCAGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: QLKFYYWLETTTAVAALRRSRNM*TDTSPR Trigger: ACGTGGGCTGGTATCAGTCCACATATTACGGCTCCT...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCAGGCTCTTCCCCAGATaGTTGCTGCTAGCAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: EQPIKVLLLARNHYSSRGRLFPR*LLLARL Trigger: CAGTCTTGCTAGCAGCAATCATCTGGGGAAGAGCCT...GCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | AACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCCTCGACTCTGTCGCTaGATATTCTCCTGTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: NQLKFYYWLETTTAVAALPRLCR*IFSCWR Trigger: TCGCCAACAGGAGAATATGCAGCGACAGAGTCGAGG...CAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | CAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCTGCTGCTGCTTACTaGTGTTGCGCATGTACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QPIKVLLLARNHYSSRGTAAAAY*CCACTC Trigger: ACACGTACATGCGCAACACCAGTAAGCAGCAGCAGC...AGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR GCA 90 bp | AACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGAGACTGAGCAATTCGTaGTTATCCGCCACAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NQLKFYYWLETTTAVAALRLSNS*LSATAD Trigger: GTCAGCTGTGGCGGATAAGCACGAATTGCTCAGTCT...CAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CCA 90 bp | GCAACTGAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCTGGCAGGGGCCTGGTaGGGCTTGAAGAGTTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: ATEQPIKVLLLARNHYSSLAGAW*GLKSLE Trigger: CTCTAAACTCTTCAAGCCCCACCAGGCCCCTGCCAG...ACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GCAACTGAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCAGCCCACGTGGAGGTaGTCAATGTTGACATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ATEQPIKVLLLARNHYSSQPTWR*SMLTWR Trigger: TCGCCATGTCAACATTGATCACCTCCACGTGGGCTG...ACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR TCA 90 bp | GAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACATGTGCTCAAAGGTaGTGCTTGCCTTTTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: EQPIKVLLLARNHYSSRGTCAQR*CLPFSM Trigger: CATTGAAAAAGGCAAGCATCACCTTTGAGCACATGT...GCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS GCA 90 bp | CGTCGATCTGCACCTGCTTCACGGCCGAATCTCCGGAGCCGCCTTTaGCTTTGCCCTTCCCCACCGCGCCGCCAGCAGAACCGGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RRSAPASRPNLRSRL*LCPSPPRRQQNRRR Trigger: CCTCCTCCGGTTCTGCTGGCGGCGCGGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCAGATCGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CCA 90 bp | GGCCTGGTGGGGCTTGAAGAGTTTAGAGAGGTCCTCCTCAGGGAGTaGGGGCTCGCCTCGACTCTGTCGCTGCATATTCTCCTGTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: GLVGLEEFREVLLRE*GLASTLSLHILLLA Trigger: CGCCAACAGGAGAATATGCAGCGACAGAGTCGAGGCGAGCCCCCACTCCCTGAGGAGGACCTCTCTAAACTCTTCAAGCCCCACCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | AGTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCCTGCATATTCTCCTGTaGGCGACGCTGCTGATACTG | + |
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Preference number: 5 (lower is better) Translates to: SALCGLSTVCLLNAFSGGLHILL*ATLLIL Trigger: CAGTATCAGCAGCGTCGCCAACAGGAGAATATGCAG...GCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS TCA 90 bp | TCTGCTGCTGCTGCTTACTGGTGTTGCGCATGTACGTGTTGTATTTaGTTATGTCCTGGCTCATTTCGTCCACCCGGTCCATCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SAAAAYWCCACTCCI*LCPGSFRPPGPSAA Trigger: AGCTGCTGATGGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGCAGCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CCA 90 bp | TGCTTACTGGTGTTGCGCATGTACGTGTTGTATTTGATTATGTCCTaGCTCATTTCGTCCACCCGGTCCATCAGCAGCTGGAGGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CLLVLRMYVLYLIMS*LISSTRSISSWRLF Trigger: GAAGAGCCTCCAGCTGCTGATGGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | AACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGTCTCCGGAGCCGCCTTaGCCTTTGCCCTTCCCCACC | + |
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Preference number: 5 (lower is better) Translates to: NQLKFYYWLETTTAVAALSPEPP*PLPFPT Trigger: GGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGA...CAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS TCA 90 bp | CGTAATATGTGGACTGATACCAGCCCACGTGGAGGTGATCAATGTTaGCATGGCGAAGGCTGCGCATCATCTCCATCTGATACTGTACCT | + |
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Preference number: 5 (lower is better) Translates to: RNMWTDTSPRGGDQC*HGEGCASSPSDTVP Trigger: AGGTACAGTATCAGATGGAGATGATGCGCAGCCTTCGCCATGTCAACATTGATCACCTCCACGTGGGCTGGTATCAGTCCACATATTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCGGGAACGGGAAGCAGTaGGTAATCTCTAGCCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QLKFYYWLETTTAVAALRGNGKQ*VISSRS Trigger: AGACCGGCTAGAGATTACCAACTGCTTCCCGTTCCC...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | GTGCACTCTGTGGCCTCTCAACAGTCTGTCTACTCAACGCCTTCTCAGGAGGCTTTAATTATTGTATTCTaGAAGAGCCTGGGCCATGAA | + |
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Preference number: 5 (lower is better) Translates to: VHSVASQQSVYSTPSQEALIIVF*KSLGHE Trigger: TTCATGGCCCAGGCTCTTCAAGAATACAATAATTAA...AGCCTCCTGAGAAGGCGTTGAGTAGACAGACTGTTGAGAGGCCACAGAGTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCCAGCGAGAGAGATCCTaGGGCAGTTTTTATGGGATC | + |
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Preference number: 5 (lower is better) Translates to: QLKFYYWLETTTAVAALRQRERS*GSFYGI Trigger: GATCCCATAAAAACTGCCCAAGGATCTCTCTCGCTG...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | CAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGCGCAACAACCTCAGTGCCTaGTCCTTCTTCTTGATAATG | + |
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Preference number: 5 (lower is better) Translates to: QLKFYYWLETTTAVAALRNNLSA*SFFLIM Trigger: CATTATCAAGAAGAAGGACAAGGCACTGAGGTTGTT...GCGCAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | GCAACTGAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTTGGGCCATGAAGAGTTaGCCTAAGTTTTGGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ATEQPIKVLLLARNHYSSWAMKS*PKFWAV Trigger: CACTGCCCAAAACTTAGGCAAACTCTTCATGGCCCA...ACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | AACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTCGCGGCACTGTCCCACATAAGGACATaGATCAGATGTGAGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: NQLKFYYWLETTTAVAALSHIRT*IRCEFL Trigger: TAAAAACTCACATCTGATCAATGTCCTTATGTGGGA...CAGTGCCGCGACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS-3UTR CAA 90 bp | GCAACTGAACAACCAATTAAAGTTTTATTATTGGCTAGAAACCACTACAGCAGTTTGCGCATGTACGTGTaGTATTTGATTATGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ATEQPIKVLLLARNHYSSLRMYV*YLIMSW Trigger: CCAGGACATAATCAAATACAACACGTACATGCGCAA...ACTGCTGTAGTGGTTTCTAGCCAATAATAAAACTTTAATTGGTTGTTCAGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 90 bp | CCGTCGATCTGCACCTGCTTCACGGCCGAATCTCCGGAGCCGCCTTaGCCTTTGCCCTTCCCCACCGCGCCGCCAGCAGAACCGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSICTCFTAESPEPP*PLPFPTAPPAEPEE Trigger: CTCCTCCGGTTCTGCTGGCGGCGCGGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCAGATCGACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS GCA 72 bp | GCACCTGCTTCACGGCCGAATCTCCGGAGCCGCCTTTaGCTTTGCCCTTCCCCACCGCGCCGCCAGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: APASRPNLRSRL*LCPSPPRRQQN Trigger: GTTCTGCTGGCGGCGCGGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 72 bp | TGCACCTGCTTCACGGCCGAATCTCCGGAGCCGCCTTaGCCTTTGCCCTTCCCCACCGCGCCGCCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CTCFTAESPEPP*PLPFPTAPPAE Trigger: TTCTGCTGGCGGCGCGGTGGGGAAGGGCAAAGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CCA 72 bp | GGGCTTGAAGAGTTTAGAGAGGTCCTCCTCAGGGAGTaGGGGCTCGCCTCGACTCTGTCGCTGCATATTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLEEFREVLLRE*GLASTLSLHIL Trigger: GAGAATATGCAGCGACAGAGTCGAGGCGAGCCCCCACTCCCTGAGGAGGACCTCTCTAAACTCTTCAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CCA 72 bp | GCAATGAGCAGTGAATCCATCCTGGCAGGGGCCTGGTaGGGCTTGAAGAGTTTAGAGAGGTCCTCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AMSSESILAGAW*GLKSLERSSSG Trigger: CCCTGAGGAGGACCTCTCTAAACTCTTCAAGCCCCACCAGGCCCCTGCCAGGATGGATTCACTGCTCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 72 bp | GCATCATCCTCCGTGTGCTGGGGGAACGGGAAGCAGTaGGTAATCTCTAGCCGGTCTTCCACAACCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: ASSSVCWGNGKQ*VISSRSSTTRP Trigger: GGGTCTGGTTGTGGAAGACCGGCTAGAGATTACCAACTGCTTCCCGTTCCCCCAGCACACGGAGGATGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 90 bp | TCAAAGTCAGCATCATCCTCCGTGTGCTGGGGGAACGGGAAGCAGTaGGTAATCTCTAGCCGGTCTTCCACAACCAGACCCAGGAGCACG | + |
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Preference number: 6 (lower is better) Translates to: SKSASSSVCWGNGKQ*VISSRSSTTRPRST Trigger: CGTGCTCCTGGGTCTGGTTGTGGAAGACCGGCTAGAGATTACCAACTGCTTCCCGTTCCCCCAGCACACGGAGGATGATGCTGACTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 90 bp | AGGGAGTGGGGGCTCGCCTCGACTCTGTCGCTGCATATTCTCCTGTaGGCGACGCTGCTGATACTGATGTTTCTGCTGCTGCTGCTTACT | + |
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Preference number: 6 (lower is better) Translates to: REWGLASTLSLHILL*ATLLILMFLLLLLT Trigger: AGTAAGCAGCAGCAGCAGAAACATCAGTATCAGCAGCGTCGCCAACAGGAGAATATGCAGCGACAGAGTCGAGGCGAGCCCCCACTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 72 bp | GGGCTCGCCTCGACTCTGTCGCTGCATATTCTCCTGTaGGCGACGCTGCTGATACTGATGTTTCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLASTLSLHILL*ATLLILMFLLL Trigger: CAGCAGCAGAAACATCAGTATCAGCAGCGTCGCCAACAGGAGAATATGCAGCGACAGAGTCGAGGCGAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS GCA 72 bp | ATTATCTTTAATACTACCAGGCCGTCGATCTGCACCTaGTTCACGGCCGAATCTCCGGAGCCGCCTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IIFNTTRPSICT*FTAESPEPPLP Trigger: AGGCAAAGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCAGATCGACGGCCTGGTAGTATTAAAGATAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS TCA 72 bp | TGGACTGATACCAGCCCACGTGGAGGTGATCAATGTTaGCATGGCGAAGGCTGCGCATCATCTCCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: WTDTSPRGGDQC*HGEGCASSPSD Trigger: ATCAGATGGAGATGATGCGCAGCCTTCGCCATGTCAACATTGATCACCTCCACGTGGGCTGGTATCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS GCA 72 bp | TGTTTGATTATCTTTAATACTACCAGGCCGTCGATCTaGACCTGCTTCACGGCCGAATCTCCGGAGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: CLIIFNTTRPSI*TCFTAESPEPP Trigger: AGGCGGCTCCGGAGATTCGGCCGTGAAGCAGGTGCAGATCGACGGCCTGGTAGTATTAAAGATAATCAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 90 bp | TTCTGCTGCTGCTGCTTACTGGTGTTGCGCATGTACGTGTTGTATTaGATTATGTCCTGGCTCATTTCGTCCACCCGGTCCATCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: FCCCCLLVLRMYVLY*IMSWLISSTRSISS Trigger: GCTGCTGATGGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGCAGCAGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CCA 72 bp | GTGTTGCGCATGTACGTGTTGTATTTGATTATGTCCTaGCTCATTTCGTCCACCCGGTCCATCAGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLRMYVLYLIMS*LISSTRSISSW Trigger: CCAGCTGCTGATGGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS TCA 72 bp | GCTGCTTACTGGTGTTGCGCATGTACGTGTTGTATTTaGTTATGTCCTGGCTCATTTCGTCCACCCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAYWCCACTCCI*LCPGSFRPPGP Trigger: TGGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 72 bp | TGCTGCTTACTGGTGTTGCGCATGTACGTGTTGTATTaGATTATGTCCTGGCTCATTTCGTCCACCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CCLLVLRMYVLY*IMSWLISSTRS Trigger: GGACCGGGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 72 bp | TGCTGCTGCTGCTTACTGGTGTTGCGCATGTACGTGTaGTATTTGATTATGTCCTGGCTCATTTCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CCCCLLVLRMYV*YLIMSWLISST Trigger: GGTGGACGAAATGAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGCAGCAGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS CAA 90 bp | CATCAGTTTAGGAGTCAGTCTGTACGCCTTCAGCGAGAGAGATCCTaGGGCAGTTTTTATGGGATCATAAATGAGGACGACAGACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HQFRSQSVRLQRERS*GSFYGIINEDDRLF Trigger: GAAGAGTCTGTCGTCCTCATTTATGATCCCATAAAAACTGCCCAAGGATCTCTCTCGCTGAAGGCGTACAGACTGACTCCTAAACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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| CDS TCA 72 bp | AGCAAGACTGAGCAATTCGTGCTTATCCGCCACAGCTaGCTTCTTCTCAAGTTCCCACATAAGGACATTGAT | + |
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Preference number: 6 (lower is better) Translates to: SKTEQFVLIRHS*LLLKFPHKDID Trigger: ATCAATGTCCTTATGTGGGAACTTGAGAAGAAGTCAGCTGTGGCGGATAAGCACGAATTGCTCAGTCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022925.10 |
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