Pregenerated sensors for EIF3D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016554Ensembl transcript IDs: ENSMUST00000100484.6, ENSMUST00000230419.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAAAGGGAATGAAATTTTATTTCCTCTGCTAGAGAACAGGAGCTaGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TKGNEILFPLLENRS*THAAQAQLGATHAG Trigger: GCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAAATTTCATTCCCTTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACAGGGACCCCAGCCTaGGGGGTTGTCCTGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPTGTPA*GVVLDH Trigger: GTGATCCAGGACAACCCCTCAGGCTGGGGTCCCTGT...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTTGCCAGCTTCCGGATaGCAGGGTCGTCTGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQALPASG*QGRLWW Trigger: CCACCACAGACGACCCTGTCATCCGGAAGCTGGCAA...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCTCATGCAGATGTCGATaGCGCAGCGCAGGATGCCCC | + |
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Preference number: 4 (lower is better) Translates to: HTLPKHSWVQHTQAPGQLSCRCR*RSAGCP Trigger: GGGGCATCCTGCGCTGCGTCATCGACATCTGCATGA...GAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | GCTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCCAGGATGGCGTCAGTaGCAAACACATTGCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: AGHTLPKHSWVQHTQAPGPGWRQ*QTHCPA Trigger: CGCAGGGCAATGTGTTTGCCACTGACGCCATCCTGG...GCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCATGCAGCTCATCAGCGTaGCCAGGATGGCGTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPCSSSA*PGWRQW Trigger: CCACTGACGCCATCCTGGCCACGCTGATGAGCTGCA...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTGTGAAAGATGCGCTTaGTGCTCCGCAGGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQACERCA*CSAGAS Trigger: AGAAGCCCCTGCGGAGCATCAAGCGCATCTTTCACA...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGGTCGTCTGTGGTGGTaGCGGTGTGAAAGATGCGCT | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPGRLWW*RCERCA Trigger: AGCGCATCTTTCACACCGTCACCACCACAGACGACC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCGAGTTGCCTTCATCTTaGGGCGGCTCATTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQAELPSS*GGSLAV Trigger: GACAGCCAATGAGCCGCCTCAAGATGAAGGCAACTC...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGTGGTGGTGACGGTGTaGAAGATGCGCTTGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPVVVTV*KMRLML Trigger: GAGCATCAAGCGCATCTTTCACACCGTCACCACCAC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | GCTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCACGCTCAGGTTGATCTaGCTGGCAAACTCATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AGHTLPKHSWVQHTQAPGTLRLI*LANSLG Trigger: GCCCAATGAGTTTGCCAGTCAGATCAACCTGAGCGT...GCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCTCCAAGCTTCCACCTaGGGTAACGGTAAGCGACGG | + |
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Preference number: 4 (lower is better) Translates to: THAAQAQLGATHAGARPTLQAST*GNGKRR Trigger: CCGTCGCTTACCGTTACCGCAGGTGGAAGCTTGGAG...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGTGTACCTCTTGTCCTaGTATGTGGCCCCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPVYLLS*YVAPVQ Trigger: CTGGACAGGGGCCACATACCAGGACAAGAGGTACAC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | GCTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTCTCTCTTTCTGCTTaGCACTCTTGGGCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGHTLPKHSWVQHTQAPGLSLSA*HSWAGS Trigger: AGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAG...GCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAAGTGCCCAGGATGACATaGCGTGAGGAGTCCTTTACG | + |
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Preference number: 4 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQVPRMT*REESFT Trigger: CGTAAAGGACTCCTCACGCCATGTCATCCTGGGCAC...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAAACTGCGAACTTCAACTaGGGAGTCTCGGGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQTANFN*GVSGFL Trigger: CAGAAACCCCGAGACTCCTCAGTTGAAGTTCGCAGT...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | ACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCACGCATCTTCATCAGCTaGGGGAAGTCCATCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TRCPSTAGCNTRRRQANSRIFIS*GKSISS Trigger: GGAGGAGATGGACTTCCCTCAGCTGATGAAGATGCG...TGAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTCTCACTCCTTGTGGTaGTGCGGTCAAAGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQASHSLW*CGQRLC Trigger: ACAAAGCCTTTGACCGCATCACCACAAGGAGTGAGA...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGGTTCCGGGGTGAGTTaGAGGAGTTGCCTTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPGSGVS*RSCLHL Trigger: AAGATGAAGGCAACTCCTTCAACTCACCCCGGAACC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGGCATATCCCGAAATTaGTCAGGAACGGCACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPGISRN*SGTAQG Trigger: TCCCTGTGCCGTTCCTGAGCAATTTCGGGATATGCC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | CACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCGCAAACACATTGCCCTaGGTTTTTGCCAGCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: HTLPKHSWVQHTQAPGQLANTLP*VFASFR Trigger: CCGGAAGCTGGCAAAAACGCAGGGCAATGTGTTTGC...GAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCATCTTGTCCTGGTATGTaGCCCCTGTCCAGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPSCPGM*PLSSLQ Trigger: TTGCAGACTGGACAGGGGCCACATACCAGGACAAGA...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | ACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCATCAGCGTGGCCAGGATaGCGTCAGTGGCAAACACAT | + |
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Preference number: 4 (lower is better) Translates to: TRCPSTAGCNTRRRQANSSAWPG*RQWQTH Trigger: ATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGA...TGAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTTGAGGCGGCTCATTaGCTGTCTCACTCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQLEAAH*LSHSQS Trigger: TGACTGTGAGTGAGACAGCCAATGAGCCGCCTCAAG...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCATCTCCACGCTCAGGTTaGTCTGACTGGCAAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: WTHAAQAQLGATHAGARPSPRSG*SDWQTH Trigger: ATGAGTTTGCCAGTCAGATCAACCTGAGCGTGGAGA...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCCTCCTCATGGAAATATaGATACTGACTTCCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQALLMEI*ILTSPT Trigger: GGTGGGGGAAGTCAGTATGCATATTTCCATGAGGAG...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAATCACCTCCCAGTCACTaGGAACTTCAACTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQSPPSH*ELQLRS Trigger: ACTCCTCAGTTGAAGTTCGCAGTGACTGGGAGGTGA...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTGATGTCTTGAGGCTCTaGCACTTCCAAGTAGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: THAAQAQLGATHAGARPTDVLRL*HFQVAH Trigger: ATGCGCTACTTGGAAGTGTCAGAGCCTCAAGACATC...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | CACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCATTCTCAGGCACTGCTaGGAGAAGTTGTGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: HTLPKHSWVQHTQAPGQLILRHC*EKLWLM Trigger: CATCAACCACAACTTCTCTCAGCAGTGCCTGAGAAT...GAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGCTGGGTGCCCAGGATaGCATGGCGTGAGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LFPLLENRSWTHAAQAQLAGCPG*HGVRSP Trigger: AGGACTCCTCACGCCATGTCATCCTGGGCACCCAGC...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCCTCCACAAATGGGTTTaGGTTGGGGAAATTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: LDTRCPSTAGCNTRRRQALHKWV*VGEIVS Trigger: AGATACAATTTCCCCAACCCAAACCCATTTGTGGAG...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGAGTACACGGAGCGGGTaGAGCTCATCAGCGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LFPLLENRSWTHAAQAQLSTRSG*SSSAWP Trigger: TGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACT...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGCTGTAGACCCGGATaGCCTGCTTGTTGGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FISSAREQELDTRCPSTAGCRPG*PACWGP Trigger: AGGACCCCAACAAGCAGGTCATCCGGGTCTACAGCC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGTCTTCTGTGTCCGTaGCGTGTCCACCAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FISSAREQELDTRCPSTAGLLCP*RVHQLE Trigger: TTCCAGCTGGTGGACACGGCACGGACACAGAAGACC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGCCGTGTCCACCAGCTaGAAGCTTGTCTCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FISSAREQELDTRCPSTAAVSTS*KLVSSS Trigger: GGAGGATGAGACAAGCTTCCAGCTGGTGGACACGGC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGCCGATCTCCTTTGCTaGATGGCTGGTAGGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: LFPLLENRSWTHAAQAQLADLLC*MAGRAY Trigger: ATATGCCCTACCAGCCATTCAGCAAAGGAGATCGGC...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR TCA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGCTTCCCCCACCGAACTaGGAGGAATACTTGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LFPLLENRSWTHAAQAQLLPPPN*EEYLFV Trigger: CACAAACAAGTATTCCTCTCAGTTCGGTGGGGGAAG...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTATTGCCCTGCGTTTTTaGCAGCTTCCGGATGACAGG | + |
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Preference number: 4 (lower is better) Translates to: FISSAREQELDTRCPSTAIALRF*QLPDDR Trigger: CCTGTCATCCGGAAGCTGGCAAAAACGCAGGGCAAT...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGACAGCAGGTCCACCGTaGCAACTTGTAGCTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LFPLLENRSWTHAAQAQLTAGPP*QLVAVV Trigger: AACAACAGCTACAAGTTGGCACGGTGGACCTGCTGT...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | AATTTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACACCTGAGGGGTTGTCCTaGATCACAGGTGTCATGAAC | + |
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Preference number: 4 (lower is better) Translates to: NFISSAREQELDTRCPSTPEGLS*ITGVMN Trigger: GTTCATGACACCTGTGATCCAGGACAACCCCTCAGG...TGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR GCA 90 bp | AATTTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACACAGTGGCAAACACATTaGCCTGCGTTTTTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NFISSAREQELDTRCPSTQWQTH*PAFLPA Trigger: AGCTGGCAAAAACGCAGGGCAATGTGTTTGCCACTG...TGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGTTTCTGTGACTTCTaGTCCCATTTTTGCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: FISSAREQELDTRCPSTAGFCDF*SHFCLT Trigger: AGTGAGGCAAAAATGGGACCAGAAGTCACAGAAACC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAGGGCATATCCCGAAATaGCTCAGGAACGGCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: WTHAAQAQLGATHAGARPGHIPK*LRNGTG Trigger: CCCTGTGCCGTTCCTGAGCAATTTCGGGATATGCCC...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTCTCTCTCTTTCTGCTaGGCACTCTTGGGCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LDTRCPSTAGCNTRRRQASLSFC*ALLGRV Trigger: GACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGA...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTAAGGACACTTCCCCGTaGGCCCCGGTCATGACACCA | + |
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Preference number: 5 (lower is better) Translates to: THAAQAQLGATHAGARPTKDTSP*APVMTP Trigger: TGGTGTCATGACCGGGGCCAACGGGGAAGTGTCCTT...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | TGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAATGTTCCTCCGATCTTaGTCTCTGCGGAGGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WTHAAQAQLGATHAGARPMFLRS*SLRRLR Trigger: GCGCAACCTCCGCAGAGACAAAGATCGGAGGAACAT...TGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS-3UTR CAA 90 bp | CACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCTTCTGCTTGGCACTCTaGGGCAGGGTCTGTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTLPKHSWVQHTQAPGQLFCLAL*GRVCRL Trigger: CAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAA...GAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCTTGAGGATGAGGTACTaGCCCTCCTCCAGCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LDTRCPSTAGCNTRRRQALRMRY*PSSSFM Trigger: CATGAAGCTGGAGGAGGGCAAGTACCTCATCCTCAA...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTACCCGGATGACCTGCTaGTTGGGGTCCTTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: THAAQAQLGATHAGARPTTRMTC*LGSLRM Trigger: CATCCTCAAGGACCCCAACAAGCAGGTCATCCGGGT...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CCA 90 bp | CCCAGGAGTACACGGAGCGGGTGCAGCTCATCAGCGTGGCCAGGATaGCGTCAGTGGCAAACACATTGCCCTGCGTTTTTGCCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSTRSGCSSSAWPG*RQWQTHCPAFLPAS Trigger: GGAAGCTGGCAAAAACGCAGGGCAATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACTCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAATCAGTGGCAAACACATaGCCCTGCGTTTTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQSVANT*PCVFAS Trigger: GCTGGCAAAAACGCAGGGCAATGTGTTTGCCACTGA...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAAAGGTTCCGGGGTGAGTaGAAGGAGTTGCCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQRFRGE*KELPSS Trigger: AGATGAAGGCAACTCCTTCAACTCACCCCGGAACCT...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | ACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCATGCTTGTTGGGGTCCTaGAGGATGAGGTACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRCPSTAGCNTRRRQANSCLLGS*RMRYLP Trigger: GGGCAAGTACCTCATCCTCAAGGACCCCAACAAGCA...TGAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 90 bp | AGCCGACTCTCTGGACAACGATGTCCCAGGAGTACACGGAGCGGGTaGAGCTCATCAGCGTGGCCAGGATGGCGTCAGTGGCAAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: SRLSGQRCPRSTRSG*SSSAWPGWRQWQTH Trigger: ATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACTCCTGGGACATCGTTGTCCAGAGAGTCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CCA 90 bp | CAACGATGTCCCAGGAGTACACGGAGCGGGTGCAGCTCATCAGCGTaGCCAGGATGGCGTCAGTGGCAAACACATTGCCCTGCGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRCPRSTRSGCSSSA*PGWRQWQTHCPAFL Trigger: CAAAAACGCAGGGCAATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACTCCTGGGACATCGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTTTGTTTGTGTACCTCTaGTCCTGGTATGTGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: THAAQAQLGATHAGARPTLFVYL*SWYVAP Trigger: AGGGGCCACATACCAGGACAAGAGGTACACAAACAA...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS-3UTR CAA 90 bp | CTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCCTTCTGGTCCCATTTTaGCCTCACTCCAAATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LDTRCPSTAGCNTRRRQALLVPF*PHSKLL Trigger: AAGCAATTTGGAGTGAGGCAAAAATGGGACCAGAAG...GGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | TTTGCCAGCTTCCGGATGACAGGGTCGTCTGTGGTGGTGACGGTGTaGAAGATGCGCTTGATGCTCCGCAGGGGCTTCTCACTCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FASFRMTGSSVVVTV*KMRLMLRRGFSLLV Trigger: CACAAGGAGTGAGAAGCCCCTGCGGAGCATCAAGCGCATCTTTCACACCGTCACCACCACAGACGACCCTGTCATCCGGAAGCTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | ACGCAGCGCAGGATGCCCCAGGCATTCTCCACGCTCAGGTTGATCTaGCTGGCAAACTCATTGGGCTTAAACTGCTGGGTGCCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TQRRMPQAFSTLRLI*LANSLGLNCWVPRM Trigger: CATCCTGGGCACCCAGCAGTTTAAGCCCAATGAGTTTGCCAGTCAGATCAACCTGAGCGTGGAGAATGCCTGGGGCATCCTGCGCTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 90 bp | TGCGAATCTCATCCGGTTCCGCTGGTAGGCGGTCTTCTGTGTCCGTaGCGTGTCCACCAGCTGGAAGCTTGTCTCATCCTCCTCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CESHPVPLVGGLLCP*RVHQLEACLILLME Trigger: TTCCATGAGGAGGATGAGACAAGCTTCCAGCTGGTGGACACGGCACGGACACAGAAGACCGCCTACCAGCGGAACCGGATGAGATTCGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS-3UTR CAA 90 bp | GCTGGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCTCAGAGTTGTCCCTCTaGTCAAAGAAGAGTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGHTLPKHSWVQHTQAPGSELSL*SKKSLE Trigger: CTCTAAACTCTTCTTTGACAAGAGGGACAACTCTGA...GCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAAAGGTCAAAGTCAGAGTaGTCCCTCTTGTCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQRSKSE*SLLSKK Trigger: CTTCTTTGACAAGAGGGACAACTCTGACTTTGACCT...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | ACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTCACTGGAGTCCCATTCATaGAGCGTCTTGATGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TRCPSTAGCNTRRRQANSLESHS*SVLMLM Trigger: CATCAACATCAAGACGCTCAATGAATGGGACTCCAG...TGAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | TGGCCCCTGTCCAGTCTGCAACCTTTCCCAGCCGATCTCCTTTGCTaGATGGCTGGTAGGGCATATCCCGAAATTGCTCAGGAACGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WPLSSLQPFPADLLC*MAGRAYPEIAQERH Trigger: GTGCCGTTCCTGAGCAATTTCGGGATATGCCCTACCAGCCATTCAGCAAAGGAGATCGGCTGGGAAAGGTTGCAGACTGGACAGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS-3UTR CAA 90 bp | GGACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACATTCATTGAGCGTCTaGATGTTGATGAAGGACACT | + |
|
Preference number: 5 (lower is better) Translates to: GHTLPKHSWVQHTQAPGQHSLSV*MLMKDT Trigger: AGTGTCCTTCATCAACATCAAGACGCTCAATGAATG...TTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | TCCATGGCCAGGTTCCGGGGTGAGTTGAAGGAGTTGCCTTCATCTTaGGGCGGCTCATTGGCTGTCTCACTCACAGTCAGGAGGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMARFRGELKELPSS*GGSLAVSLTVRRSK Trigger: CTTTGACCTCCTGACTGTGAGTGAGACAGCCAATGAGCCGCCTCAAGATGAAGGCAACTCCTTCAACTCACCCCGGAACCTGGCCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | TCCACCGTGCCAACTTGTAGCTGTTGTTCTTCAATTCAGTGGCGATaGCAGCCCCACGCTGAGAGTCCAGCTTCTGACGCCAGTCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: STVPTCSCCSSIQWR*QPHAESPASDASQR Trigger: GCGTTGACTGGCGTCAGAAGCTGGACTCTCAGCGTGGGGCTGTCATCGCCACTGAATTGAAGAACAACAGCTACAAGTTGGCACGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGCGGATGACCTGCTTGTaGGGGTCCTTGAGGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLLENRSWTHAAQAQLRMTCL*GSLRMR Trigger: CCTCATCCTCAAGGACCCCAACAAGCAGGTCATCCG...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | GTCGTAGTACTCCAGGGCTCCGCAGCACTCGATGTCTTGAGGCTCTaGCACTTCCAAGTAGCGCATCTTCATCAGCTGAGGGAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VVVLQGSAALDVLRL*HFQVAHLHQLREVH Trigger: ATGGACTTCCCTCAGCTGATGAAGATGCGCTACTTGGAAGTGTCAGAGCCTCAAGACATCGAGTGCTGCGGAGCCCTGGAGTACTACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | GAAGTTGTGGTTGATGTAGGTGGCTTCCATGGCCAGGTTCCGGGGTaGGTTGAAGGAGTTGCCTTCATCTTGAGGCGGCTCATTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EVVVDVGGFHGQVPG*VEGVAFILRRLIGC Trigger: ACAGCCAATGAGCCGCCTCAAGATGAAGGCAACTCCTTCAACTCACCCCGGAACCTGGCCATGGAAGCCACCTACATCAACCACAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 90 bp | CTCTCTTTCTGCTTGGCACTCTTGGGCAGGGTCTGTAGGTTGAACTaGACCATGTTCCTCCGATCTTTGTCTCTGCGGAGGTTGCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSFCLALLGRVCRLN*TMFLRSLSLRRLRC Trigger: ACAGCGCAACCTCCGCAGAGACAAAGATCGGAGGAACATGGTGCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS-3UTR CAA 90 bp | ACACACGCTGCCCAAGCACAGCTGGGTGCAACACACGCAGGCGCCAGGCCAACTACAAATGGGTTTGGGTaGGGGAAATTGTATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: THAAQAQLGATHAGARPTTNGFG*GKLYLS Trigger: AGAAAGATACAATTTCCCCAACCCAAACCCATTTGT...AGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGGGCAGCGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 90 bp | GTTCTCTCTCTTTCTGCTTGGCACTCTTGGGCAGGGTCTGTAGGTTaGACTGCACCATGTTCCTCCGATCTTTGTCTCTGCGGAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSLSAWHSWAGSVG*TAPCSSDLCLCGGC Trigger: GCAACCTCCGCAGAGACAAAGATCGGAGGAACATGGTGCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CCA 90 bp | TCAGAGTTGTCCCTCTTGTCAAAGAAGAGTTTAGAGCCGACTCTCTaGACAACGATGTCCCAGGAGTACACGGAGCGGGTGCAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SELSLLSKKSLEPTL*TTMSQEYTERVQLI Trigger: GATGAGCTGCACCCGCTCCGTGTACTCCTGGGACATCGTTGTCCAGAGAGTCGGCTCTAAACTCTTCTTTGACAAGAGGGACAACTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGGAGTTGCCTTCATCTaGAGGCGGCTCATTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FISSAREQELDTRCPSTAGVAFI*RRLIGC Trigger: ACAGCCAATGAGCCGCCTCAAGATGAAGGCAACTCC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 90 bp | CTTCAGGTACTCAGATCCAGCCAGCAAAGCACAGCAGGTCCACCGTaGCAACTTGTAGCTGTTGTTCTTCAATTCAGTGGCGATGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQVLRSSQQSTAGPP*QLVAVVLQFSGDDS Trigger: GCTGTCATCGCCACTGAATTGAAGAACAACAGCTACAAGTTGGCACGGTGGACCTGCTGTGCTTTGCTGGCTGGATCTGAGTACCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | TTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGTTGAGCGTCTTGATGTaGATGAAGGACACTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFPLLENRSWTHAAQAQLLSVLM*MKDTSP Trigger: CGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAA...CAGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS-3UTR CAA 90 bp | AATTTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACACCACCAGCTGGAAGCTaGTCTCATCCTCCTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NFISSAREQELDTRCPSTPPAGS*SHPPHG Trigger: TCCATGAGGAGGATGAGACAAGCTTCCAGCTGGTGG...TGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 90 bp | CGTGTCCACCAGCTGGAAGCTTGTCTCATCCTCCTCATGGAAATATaGATACTGACTTCCCCCACCGAACTGAGAGGAATACTTGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVHQLEACLILLMEI*ILTSPTELRGILVC Trigger: ACAAACAAGTATTCCTCTCAGTTCGGTGGGGGAAGTCAGTATGCATATTTCCATGAGGAGGATGAGACAAGCTTCCAGCTGGTGGACACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTCCTCTGCTAGAGAACAGGAGCTGGACACACGCTGCCCAAGCACAGCTGAGAGGAATACTTGTTaGTGTACCTCTTGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FISSAREQELDTRCPSTAERNTC*CTSCPG Trigger: ACCAGGACAAGAGGTACACAAACAAGTATTCCTCTC...AGCTGTGCTTGGGCAGCGTGTGTCCAGCTCCTGTTCTCTAGCAGAGGAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CCA 90 bp | AGCGACGGAGGCGATCTCATTCTTATCCATGTCGTCCTCCACAAATaGGTTTGGGTTGGGGAAATTGTATCTTTCTCTTCCCATTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDGGDLILIHVVLHK*VWVGEIVSFSSHSQ Trigger: CTGAGAATGGGAAGAGAAAGATACAATTTCCCCAACCCAAACCCATTTGTGGAGGACGACATGGATAAGAATGAGATCGCCTCCGTCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS GCA 72 bp | TCTGGACAACGATGTCCCAGGAGTACACGGAGCGGGTaGAGCTCATCAGCGTGGCCAGGATGGCGTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGQRCPRSTRSG*SSSAWPGWRQW Trigger: CCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACTCCTGGGACATCGTTGTCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CCA 72 bp | CCCAGGAGTACACGGAGCGGGTGCAGCTCATCAGCGTaGCCAGGATGGCGTCAGTGGCAAACACATTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRSTRSGCSSSA*PGWRQWQTHCP Trigger: AGGGCAATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGTACTCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS TCA 72 bp | GGTACTTGCCCTCCTCCAGCTTCATGCAGATGTCGATaGCGCAGCGCAGGATGCCCCAGGCATTCTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: GTCPPPASCRCR*RSAGCPRHSPR Trigger: GCGTGGAGAATGCCTGGGGCATCCTGCGCTGCGTCATCGACATCTGCATGAAGCTGGAGGAGGGCAAGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS GCA 72 bp | CATCCGGTTCCGCTGGTAGGCGGTCTTCTGTGTCCGTaGCGTGTCCACCAGCTGGAAGCTTGTCTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HPVPLVGGLLCP*RVHQLEACLIL Trigger: GAGGATGAGACAAGCTTCCAGCTGGTGGACACGGCACGGACACAGAAGACCGCCTACCAGCGGAACCGGATG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CCA 72 bp | GGGTGCAGCTCATCAGCGTGGCCAGGATGGCGTCAGTaGCAAACACATTGCCCTGCGTTTTTGCCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSSAWPGWRQ*QTHCPAFLPAS Trigger: GGAAGCTGGCAAAAACGCAGGGCAATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS CCA 72 bp | ACACGGAGCGGGTGCAGCTCATCAGCGTGGCCAGGATaGCGTCAGTGGCAAACACATTGCCCTGCGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRSGCSSSAWPG*RQWQTHCPAFL Trigger: CAAAAACGCAGGGCAATGTGTTTGCCACTGACGCCATCCTGGCCACGCTGATGAGCTGCACCCGCTCCGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS CAA 90 bp | TTGGGCAGGGTCTGTAGGTTGAACTGCACCATGTTCCTCCGATCTTaGTCTCTGCGGAGGTTGCGCTGTGCGAATCTCATCCGGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGRVCRLNCTMFLRS*SLRRLRCANLIRFR Trigger: GCGGAACCGGATGAGATTCGCACAGCGCAACCTCCGCAGAGACAAAGATCGGAGGAACATGGTGCAGTTCAACCTACAGACCCTGCCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
||
| CDS TCA 72 bp | CTCCAGGGCTCCGCAGCACTCGATGTCTTGAGGCTCTaGCACTTCCAAGTAGCGCATCTTCATCAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQGSAALDVLRL*HFQVAHLHQLR Trigger: CCTCAGCTGATGAAGATGCGCTACTTGGAAGTGTCAGAGCCTCAAGACATCGAGTGCTGCGGAGCCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS CCA 72 bp | GTGCCCAGGATGACATGGCGTGAGGAGTCCTTTACGTaGTACCGGGACACATACCCGAGCTTCAGGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPRMTWREESFT*YRDTYPSFRYS Trigger: TGAGTACCTGAAGCTCGGGTATGTGTCCCGGTACCACGTAAAGGACTCCTCACGCCATGTCATCCTGGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
||
| CDS CAA 90 bp | GGTAGGCGGTCTTCTGTGTCCGTGCCGTGTCCACCAGCTGGAAGCTaGTCTCATCCTCCTCATGGAAATATGCATACTGACTTCCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GRRSSVSVPCPPAGS*SHPPHGNMHTDFPH Trigger: GTGGGGGAAGTCAGTATGCATATTTCCATGAGGAGGATGAGACAAGCTTCCAGCTGGTGGACACGGCACGGACACAGAAGACCGCCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS TCA 72 bp | AGGTTCCGGGGTGAGTTGAAGGAGTTGCCTTCATCTTaGGGCGGCTCATTGGCTGTCTCACTCACAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RFRGELKELPSS*GGSLAVSLTVR Trigger: CCTGACTGTGAGTGAGACAGCCAATGAGCCGCCTCAAGATGAAGGCAACTCCTTCAACTCACCCCGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 72 bp | TTCCCATTCTCAGGCACTGCTGAGAGAAGTTGTGGTTaGTGTAGGTGGCTTCCATGGCCAGGTTCCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPFSGTAERSCG*CRWLPWPGSGV Trigger: CACCCCGGAACCTGGCCATGGAAGCCACCTACATCAACCACAACTTCTCTCAGCAGTGCCTGAGAATGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 72 bp | TTGAGCGTCTTGATGTTGATGAAGGACACTTCCCCGTaGGCCCCGGTCATGACACCATCGTGTTCACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSVLMLMKDTSP*APVMTPSCSQR Trigger: CCGCTGTGAACACGATGGTGTCATGACCGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 72 bp | CCAACTTGTAGCTGTTGTTCTTCAATTCAGTGGCGATaGCAGCCCCACGCTGAGAGTCCAGCTTCTGACGCC | + |
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Preference number: 6 (lower is better) Translates to: PTCSCCSSIQWR*QPHAESPASDA Trigger: GGCGTCAGAAGCTGGACTCTCAGCGTGGGGCTGTCATCGCCACTGAATTGAAGAACAACAGCTACAAGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 72 bp | AGGATGCCCCAGGCATTCTCCACGCTCAGGTTGATCTaGCTGGCAAACTCATTGGGCTTAAACTGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RMPQAFSTLRLI*LANSLGLNCWV Trigger: CACCCAGCAGTTTAAGCCCAATGAGTTTGCCAGTCAGATCAACCTGAGCGTGGAGAATGCCTGGGGCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CCA 72 bp | TCCCTCTTGTCAAAGAAGAGTTTAGAGCCGACTCTCTaGACAACGATGTCCCAGGAGTACACGGAGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLSKKSLEPTL*TTMSQEYTERV Trigger: CACCCGCTCCGTGTACTCCTGGGACATCGTTGTCCAGAGAGTCGGCTCTAAACTCTTCTTTGACAAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 72 bp | CAATGCCTGGAGTCCCATTCATTGAGCGTCTTGATGTaGATGAAGGACACTTCCCCGTTGGCCCCGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: QCLESHSLSVLM*MKDTSPLAPVM Trigger: CATGACCGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGACTCCAGGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 72 bp | ATGACCTGCTTGTTGGGGTCCTTGAGGATGAGGTACTaGCCCTCCTCCAGCTTCATGCAGATGTCGATGACG | + |
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Preference number: 6 (lower is better) Translates to: MTCLLGSLRMRY*PSSSFMQMSMT Trigger: CGTCATCGACATCTGCATGAAGCTGGAGGAGGGCAAGTACCTCATCCTCAAGGACCCCAACAAGCAGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 90 bp | CGTTCTCTCTCTTTCTGCTTGGCACTCTTGGGCAGGGTCTGTAGGTaGAACTGCACCATGTTCCTCCGATCTTTGTCTCTGCGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RSLSFCLALLGRVCR*NCTMFLRSLSLRRL Trigger: CAACCTCCGCAGAGACAAAGATCGGAGGAACATGGTGCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CAA 90 bp | TCCCATTCATTGAGCGTCTTGATGTTGATGAAGGACACTTCCCCGTaGGCCCCGGTCATGACACCATCGTGTTCACAGCGGACGATAAGG | + |
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Preference number: 6 (lower is better) Translates to: SHSLSVLMLMKDTSP*APVMTPSCSQRTIR Trigger: CCTTATCGTCCGCTGTGAACACGATGGTGTCATGACCGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 90 bp | ACGCCATTACAATGCCTGGAGTCCCATTCATTGAGCGTCTTGATGTaGATGAAGGACACTTCCCCGTTGGCCCCGGTCATGACACCATCG | + |
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Preference number: 6 (lower is better) Translates to: TPLQCLESHSLSVLM*MKDTSPLAPVMTPS Trigger: CGATGGTGTCATGACCGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGACTCCAGGCATTGTAATGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS TCA 72 bp | TCCAGTCTGCAACCTTTCCCAGCCGATCTCCTTTGCTaGATGGCTGGTAGGGCATATCCCGAAATTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSLQPFPADLLC*MAGRAYPEIAQ Trigger: CTGAGCAATTTCGGGATATGCCCTACCAGCCATTCAGCAAAGGAGATCGGCTGGGAAAGGTTGCAGACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS GCA 72 bp | CTCAGATCCAGCCAGCAAAGCACAGCAGGTCCACCGTaGCAACTTGTAGCTGTTGTTCTTCAATTCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSSQQSTAGPP*QLVAVVLQFSG Trigger: GCCACTGAATTGAAGAACAACAGCTACAAGTTGGCACGGTGGACCTGCTGTGCTTTGCTGGCTGGATCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 72 bp | GTCTGTAGGTTGAACTGCACCATGTTCCTCCGATCTTaGTCTCTGCGGAGGTTGCGCTGTGCGAATCTCATC | + |
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Preference number: 6 (lower is better) Translates to: VCRLNCTMFLRS*SLRRLRCANLI Trigger: GATGAGATTCGCACAGCGCAACCTCCGCAGAGACAAAGATCGGAGGAACATGGTGCAGTTCAACCTACAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CAA 72 bp | CCATTACAATGCCTGGAGTCCCATTCATTGAGCGTCTaGATGTTGATGAAGGACACTTCCCCGTTGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PLQCLESHSLSV*MLMKDTSPLAP Trigger: CGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGACTCCAGGCATTGTAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 90 bp | CAGTCAACGCCATTACAATGCCTGGAGTCCCATTCATTGAGCGTCTaGATGTTGATGAAGGACACTTCCCCGTTGGCCCCGGTCATGACA | + |
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Preference number: 6 (lower is better) Translates to: QSTPLQCLESHSLSV*MLMKDTSPLAPVMT Trigger: TGTCATGACCGGGGCCAACGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGACTCCAGGCATTGTAATGGCGTTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 90 bp | GCTGTCTCACTCACAGTCAGGAGGTCAAAGTCAGAGTTGTCCCTCTaGTCAAAGAAGAGTTTAGAGCCGACTCTCTGGACAACGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: AVSLTVRRSKSELSL*SKKSLEPTLWTTMS Trigger: GGACATCGTTGTCCAGAGAGTCGGCTCTAAACTCTTCTTTGACAAGAGGGACAACTCTGACTTTGACCTCCTGACTGTGAGTGAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 72 bp | AAGCGAATTCGTTCTCTCTCTTTCTGCTTGGCACTCTaGGGCAGGGTCTGTAGGTTGAACTGCACCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KRIRSLSFCLAL*GRVCRLNCTMF Trigger: GAACATGGTGCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGAACGAATTCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CAA 72 bp | CAGTCAACGCCATTACAATGCCTGGAGTCCCATTCATaGAGCGTCTTGATGTTGATGAAGGACACTTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: QSTPLQCLESHS*SVLMLMKDTSP Trigger: CGGGGAAGTGTCCTTCATCAACATCAAGACGCTCAATGAATGGGACTCCAGGCATTGTAATGGCGTTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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| CDS CAA 90 bp | TTTTTCTGCAAGCGAATTCGTTCTCTCTCTTTCTGCTTGGCACTCTaGGGCAGGGTCTGTAGGTTGAACTGCACCATGTTCCTCCGATCT | + |
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Preference number: 6 (lower is better) Translates to: FFCKRIRSLSFCLAL*GRVCRLNCTMFLRS Trigger: AGATCGGAGGAACATGGTGCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGAACGAATTCGCTTGCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS GCA 72 bp | CAGCTGGAAGCTTGTCTCATCCTCCTCATGGAAATATaGATACTGACTTCCCCCACCGAACTGAGAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: QLEACLILLMEI*ILTSPTELRGI Trigger: TATTCCTCTCAGTTCGGTGGGGGAAGTCAGTATGCATATTTCCATGAGGAGGATGAGACAAGCTTCCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CAA 72 bp | TTTTTCTGCAAGCGAATTCGTTCTCTCTCTTTCTGCTaGGCACTCTTGGGCAGGGTCTGTAGGTTGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: FFCKRIRSLSFC*ALLGRVCRLNC Trigger: GCAGTTCAACCTACAGACCCTGCCCAAGAGTGCCAAGCAGAAAGAGAGAGAACGAATTCGCTTGCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100484.6 ENSMUST00000230419.2 |
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| CDS CAA 72 bp | GCTGTCTCACTCACAGTCAGGAGGTCAAAGTCAGAGTaGTCCCTCTTGTCAAAGAAGAGTTTAGAGCCGACT | + |
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Preference number: 6 (lower is better) Translates to: AVSLTVRRSKSE*SLLSKKSLEPT Trigger: AGTCGGCTCTAAACTCTTCTTTGACAAGAGGGACAACTCTGACTTTGACCTCCTGACTGTGAGTGAGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100484.6 |
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