Pregenerated sensors for EIF3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056076Ensembl transcript IDs: ENSMUST00000100507.8, ENSMUST00000199377.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGAGCAAGAAAGCACAGGTAAGAGCCCAGCACGAGGCTCGCCGTaGAGGGTGGCCTCGGATCCTGGGCACGGCACGGTGACACACAGT | + |
|
Preference number: 1 (lower is better) Translates to: PEQESTGKSPARGSP*RVASDPGHGTVTHS Trigger: ACTGTGTGTCACCGTGCCGTGCCCAGGATCCGAGGCCACCCTTCACGGCGAGCCTCGTGCTGGGCTCTTACCTGTGCTTTCTTGCTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 90 bp | CCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGTGCAGACTCCTaGTGGTCTCCAGGCCACACGACACTGGCCCACAGGAACAGCAAG | + |
|
Preference number: 1 (lower is better) Translates to: PPEFLAQVSGGCADS*WSPGHTTLAHRNSK Trigger: CTTGCTGTTCCTGTGGGCCAGTGTCGTGTGGCCTGGAGACCATCAGGAGTCTGCACACCCACCACTTACTTGTGCCAGAAACTCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR CCA 90 bp | ATTTCCACATCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTaGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: ISTSNLHRGCHNLNR*EVWVPPEFLAQVSG Trigger: ACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGATGTGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR GCA 90 bp | TCACACAGGGTTGCTTTTATTTCCACATCCAACCTGCACAGAGGCTaGCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: SHRVAFISTSNLHRG*HNLNRWEVWVPPEF Trigger: AAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGATGTGGAAATAAAAGCAACCCTGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGGAACACTGCAGTaGGGCTCCAATGCAGACACG | + |
|
Preference number: 2 (lower is better) Translates to: SNLHRGCHNLNRWEVWVPPGTLQ*GSNADT Trigger: CGTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGG...AGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 72 bp | GAAAGCACAGGTAAGAGCCCAGCACGAGGCTCGCCGTaGAGGGTGGCCTCGGATCCTGGGCACGGCACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ESTGKSPARGSP*RVASDPGHGTV Trigger: CACCGTGCCGTGCCCAGGATCCGAGGCCACCCTTCACGGCGAGCCTCGTGCTGGGCTCTTACCTGTGCTTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 72 bp | GCAGACACGGCTGATAAAAACCCAAACAGGGCAAGGTaGGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: ADTADKNPNRAR*EQRLECPRCGP Trigger: AGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGGTTTTTATCAGCCGTGTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 72 bp | TTTCTGGCACAAGTAAGTGGTGGGTGTGCAGACTCCTaGTGGTCTCCAGGCCACACGACACTGGCCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLAQVSGGCADS*WSPGHTTLAHR Trigger: CCTGTGGGCCAGTGTCGTGTGGCCTGGAGACCATCAGGAGTCTGCACACCCACCACTTACTTGTGCCAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 72 bp | TTTCCACATCCAACCTGCACAGAGGCTGCCACAACCTaGACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPHPTCTEAATT*TGGRCGCLQSF Trigger: GAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGATGTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR CCA 72 bp | CTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTaGGTGCACTCGCAGTCCAGAGCAAGAAAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKAQSCVGIEEP*VHSQSRARKHR Trigger: CCTGTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR TCA 72 bp | CCACAGGAACAGCAAGTCCGTGAATGGAAACCCCACTaGGCTGTAGGTGAAGGCTCTGGAAACCCCATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PQEQQVREWKPH*AVGEGSGNPMD Trigger: GTCCATGGGGTTTCCAGAGCCTTCACCTACAGCTCAGTGGGGTTTCCATTCACGGACTTGCTGTTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| 3UTR GCA 72 bp | ACAGCAGCAGGAGTTAAGAGGAGCCACCAGGAACACTaGAGTGAGGCTCCAATGCAGACACGGCTGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAAGVKRSHQEH*SEAPMQTRLIK Trigger: TTTTATCAGCCGTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTGCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCCTCGCCAACGGCCTCTaGCTTCCCGGGAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALLANGL*LPGSRG Trigger: CCCTCTGCTCCCGGGAAGGCAGAGGCCGTTGGCGAG...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGCACTCGCAGTCCAGAGCAAGAAAGCACAGGTAAGAGCCCAGCACGAGGCATTGGGCCGCCGGCTTaGCCCTCACTTCGGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCTRSPEQESTGKSPARGIGPPA*PSLRAP Trigger: CGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAAT...GCCTCGTGCTGGGCTCTTACCTGTGCTTTCTTGCTCTGGACTGCGAGTGCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CTGATAAAAACCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGGAGCAGAGGGCTCCTaGGACGGGGACCGCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIKTQTGQGESRGSSVPAGAEGS*DGDRSA Trigger: GGCGGAGCGGTCCCCGTCGCAGGAGCCCTCTGCTCC...AGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGGTTTTTATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | TCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAAGGCACCGTTCATaGTCCTCAGCCCGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNLHRGCHNLNRWEVWVPPRHRS*SSARPA Trigger: TGCTGGCCGGGCTGAGGAGCATGAACGGTGCCTTGG...AGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGATCTCCTGTCTGGTaGGGAGCTGCATCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQGKVRAEARVSPLWTWGSPVW*GAASGS Trigger: TGACCCTGATGCAGCTCCCCACCAGACAGGAGATCC...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGGGTCTCCAGAGCAGCTaGCAGAAGCGGTCCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTGQGESRGSSVPAVDLGGLQSS*QKRSLL Trigger: CAACAAGGACCGCTTCTGCCAGCTGCTCTGGAGACC...CCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAAATCCTCGGGGTCGCTaGAGGAGGGCTCATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAEGTELCRDRRTLGALANPRGR*RRAHLP Trigger: AGGCAGATGAGCCCTCCTTCAGCGACCCCGAGGATT...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGCACTCGCAGTCCAGAGCAAGAAAGCACAGGTAAGAGCCCAGCACGAGGCGAGTGTTGGGGGCCTTaGTCTCCAGAGCAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCTRSPEQESTGKSPARGECWGP*SPEQLA Trigger: TGCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTC...GCCTCGTGCTGGGCTCTTACCTGTGCTTTCTTGCTCTGGACTGCGAGTGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAACAGCATCCACAGCATaGGCGGGAGAAGCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAEGTELCRDRRTLGALATASTA*AGEAYS Trigger: GGAGTACGCTTCTCCCGCCCATGCTGTGGATGCTGT...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGCGTCATTCCAGAAGATaGACGTCCGGTCTCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHRGCHNLNRWEVWVPPERHSRR*TSGLRS Trigger: AGAGCGGAGACCGGACGTCCATCTTCTGGAATGACG...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCACCACGAACTGCCCCTaGGGACTCCAGAAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALTTNCP*GLQKMV Trigger: CACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGT...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGGATGGGCCAGTGGGCTaGGCTTTCGCAGTGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QVGGVGASRVSGTSKWWVDGPVG*AFAVKT Trigger: GGTTTTCACTGCGAAAGCTCAGCCCACTGGCCCATC...CACCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCTTATCTGATCCTGGCTaGGGAGTGTTGGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALLSDPG*GVLGAL Trigger: CAAGGCCCCCAACACTCCTCAGCCAGGATCAGATAA...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGAAAGCACGCCAGCACCACGAACTaGCCCTGGGGACTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVGIEEPWVHSQSRARKHASTTN*PWGLQK Trigger: CTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGC...GTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGGCCATTTTCCGGTATTaGCGGAAGTCCTCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTGQGESRGSSVPAVDLGAIFRY*RKSSIM Trigger: CATGATGGAGGACTTCCGGCAATACCGGAAAATGGC...CCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGGGGGACTCCAGAAGATaGTGTTGGCTTGCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHRGCHNLNRWEVWVPPEGDSRR*CWLAAC Trigger: ACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCC...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCATTGTCCACCTTGTaGCTCCACCACGACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALALSTL*LHHDTE Trigger: CTCTGTGTCGTGGTGGAGCCACAAGGTGGACAATGC...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCACCCAAAAAGCAATaGTGTTACCACCCGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALAPKKQ*CYHPET Trigger: GGTCTCCGGGTGGTAACATCATTGCTTTTTGGGTGC...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGAAACCTCTCTTCTTATaGCCCGTGAGGATGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHRGCHNLNRWEVWVPPEKPLFL*PVRMSQ Trigger: CTGGGACATCCTCACGGGCCATAAGAAGAGAGGTTT...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGAGGCTCCAATGCAGACACCTCGGATCTCCTGTCTaGTGGGGAGCTGCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QELRGATRNTAVRLQCRHLGSPV*WGAASG Trigger: CCCTGATGCAGCTCCCCACCAGACAGGAGATCCGAG...GTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | GGACCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACGCTCTTTCTTCAATTaGGACTGGGTCCTTGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGAEGTELCRDRRTLGARSFFN*DWVLDV Trigger: GACGTCAAGGACCCAGTCTCAATTGAAGAAAGAGCG...TGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTCCACCAGTTCCTTTaGAGCTTTGGACTGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LHRGCHNLNRWEVWVPPEFHQFL*SFGLAQ Trigger: TTGAGCCAGTCCAAAGCTTCAAAGGAACTGGTGGAA...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGACATCAACAGGTACCTaGTTCTCCCTCATTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTGQGESRGSSVPAVDLGTSTGT*FSLIRN Trigger: ATTCCGAATGAGGGAGAAGCAGGTACCTGTTGATGT...CCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCAGGGTCACCCTGGCTaGAATATCTTTGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLHRGCHNLNRWEVWVPQGHPG*NIFVFR Trigger: CCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTG...AGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGAGGCTCCAATGCAGACACATCCCGTCCGCTTCCTaGGGCCGATCTTTGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QELRGATRNTAVRLQCRHIPSAS*GRSLST Trigger: TGTACTCAAAGATCGGCCTCAGGAAGCGGACGGGAT...GTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGAAAATCACACTGTACTaGTCTCTACACTCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKQGKVRAEARVSPLWTWKITLY*SLHSAS Trigger: AGAGGCAGAGTGTAGAGATCAGTACAGTGTGATTTT...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGAAACCCCATGGACAGCAGCAGGAGTTAAGAGGAGCCACCAGGAACACTGAGAAGTCGATGAGCTaGACGCCTTGGTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWKPHGQQQELRGATRNTEKSMS*TPWWLN Trigger: GTTCAGCCACCAAGGCGTGCAGCTCATCGACTTCTC...AGTGTTCCTGGTGGCTCCTCTTAACTCCTGCTGCTGTCCATGGGGTTTCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGCTGAAGGCACAGAGCATCCAGGGTCATTCTTaGAAAGAATTTGCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESRGSSVPAVDLGLKAQSIQGHS*KEFAIM Trigger: CATGATGGCAAATTCTTTGCAAGAATGACCCTGGAT...GCTCTGTGCCTTCAGCCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGGCACGGCAAACTTACTaGCATTGGGTTCCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGARQTY*HWVPRQ Trigger: TTGCCTGGGAACCCAATGGCAGTAAGTTTGCCGTGC...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGATGGTGTTGGCTTGCTaGTTGTCAAACATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTGQGESRGSSVPAVDLGMVLAC*LSNILM Trigger: CATCAAGATGTTTGACAAGCAGCAAGCCAACACCAT...CCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CTGATAAAAACCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTTTTCTCAAGTCGGTCTaGCCCCACCTGAGGGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIKTQTGQGESRGSSVPAFLKSV*PHLRDV Trigger: AACGTCCCTCAGGTGGGGCCAGACCGACTTGAGAAA...AGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGGTTTTTATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | AAACCCCATGGACAGCAGCAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGACCTCTGAATCTGCTTaGACTTGTCCCCTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPHGQQQELRGATRNTAVTSESA*TCPLPR Trigger: TCTGGGGAGGGGACAAGTTCAAGCAGATTCAGAGGT...CACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTGCTGCTGTCCATGGGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGGTGGCTGAACCTCTaGATCTGCTTGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGWWLNL*ICLNLS Trigger: GGACAAGTTCAAGCAGATTCAGAGGTTCAGCCACCA...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGTTAATTTGCTTTATCTaGTCCTGGCTGAGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PKQGKVRAEARVSPLWTWLICFI*SWLRSV Trigger: AACACTCCTCAGCCAGGATCAGATAAAGCAAATTAA...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | GGACCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACCATTTTTCTGCCAGTaGAGCTTGCAATCAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPGAEGTELCRDRRTLGAPFFCQ*SLQSTT Trigger: TGTGGTTGATTGCAAGCTGCACTGGCAGAAAAATGG...TGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | TGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGGCCATGTAGTGCTCTaGAATGTTCATGACGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHNLNRWEVWVPPEFLAQGHVVL*NVHDGA Trigger: TGCACCGTCATGAACATTGCAGAGCACTACATGGCC...TTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCCTCAAGCGATCCTTCTaGTCAAAGATCTTGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALLKRSF*SKILEY Trigger: GTACTCCAAGATCTTTGAGCAGAAGGATCGCTTGAG...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCAAGAATTTGCCATCATaGCTCCACTTGAAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALKNLPS*LHLKMG Trigger: GCCCATCTTCAAGTGGAGCCATGATGGCAAATTCTT...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCATGTCCAAAAGGCCCATaGAAGGTGTTTCATAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GAEGTELCRDRRTLGALACPKGP*KVFHRC Trigger: GCATCTATGAAACACCTTCCATGGGCCTTTTGGACA...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGTCTGCTCAAAGATCTTaGAGTACTTCTTCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKQGKVRAEARVSPLWTWSAQRS*STSSDP Trigger: AGGATCTGAAGAAGTACTCCAAGATCTTTGAGCAGA...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGCCTGAGGCCGATCTTTaGGTACATCACCAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGPEADL*VHHQVV Trigger: AACTACTTGGTGATGTACTCAAAGATCGGCCTCAGG...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGAAAGCACTTGAGACTGGGTCCTTaGCGTCATTCCAGAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CVGIEEPWVHSQSRARKHLRLGP*RHSRRW Trigger: CCATCTTCTGGAATGACGTCAAGGACCCAGTCTCAA...GTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CTGATAAAAACCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTCTGATCTCTACACTCTaGCTCTTCCAGCCAGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: LIKTQTGQGESRGSSVPALISTL*LFQPVT Trigger: CGTTACTGGCTGGAAGAGGCAGAGTGTAGAGATCAG...AGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGGTTTTTATCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGGTTCAATCTTCCCGTTaGTCTTCACGTGGTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGVQSSR*SSRGRR Trigger: CCTTCTACCACGTGAAGAGCAACGGGAAGATTGAAC...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGTCCATCAGAGGGCTaGACGTTACCAAGTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGCPSEG*TLPSIF Trigger: AAAGATACTTGGTAACGTTCAGCCCTCTGATGGACA...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGAAGATGGTGTTGGCTTaGTGCTTGTCAAACATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVGGVGASRVSGTSKWWVKMVLA*CLSNIL Trigger: CAAGATGTTTGACAAGCAGCAAGCCAACACCATCTT...CACCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGAGGCTCCAATGCAGACACTCCTTGTTGTTCTTCTaGAGAAGGCGACCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QELRGATRNTAVRLQCRHSLLFF*RRRPWK Trigger: CTTCCAAGGTCGCCTTCTGCAGAAGAACAACAAGGA...GTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCCATGGACAGCAGCAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGGCATCAGGGTCACCCTaGCTGGAATATCTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGQQQELRGATRNTAVASGSP*LEYLCL Trigger: AAGACAAAGATATTCCAGCCAGGGTGACCCTGATGC...CACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTGCTGCTGTCCATGGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGAAAGCACTTTGAAGCTTTGGACTaGCTCAAGCGATCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVGIEEPWVHSQSRARKHFEALD*LKRSFC Trigger: GCAGAAGGATCGCTTGAGCCAGTCCAAAGCTTCAAA...GTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | CTGATAAAAACCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTCCCAGGCAAAGGCTATaGTGGTTTCTTTCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIKTQTGQGESRGSSVPAPRQRL*WFLSSQ Trigger: TTGAGATGAAAGAAACCATCATAGCCTTTGCCTGGG...AGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGGTTTTTATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGAAAGCACTCCAGAAGATGGTGTTaGCTTGCTGCTTGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CVGIEEPWVHSQSRARKHSRRWC*LAACQT Trigger: TGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGA...GTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCTTGGAGAAGATCTTGTaGATGACATTTTTGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAEGTELCRDRRTLGALLEKIL*MTFLSF Trigger: GAAACTCAAAAATGTCATCCACAAGATCTTCTCCAA...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR TCA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGATATTTCAAAATTTGTaGCAACTCCCTGTGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGIFQNL*QLPVCL Trigger: AAGGCACACAGGGAGTTGTCACAAATTTTGAAATAT...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | CCAGACCCTGCCGCCTCGTCCGTCGGCGGCGACTCGGAGGCCGGCTaGTGCCTCGCGGGCTCAGCCCGCTCCTCGGCCGCCTCGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PDPAASSVGGDSEAG*CLAGSARSSAASGT Trigger: GGTGCCCGAGGCGGCCGAGGAGCGGGCTGAGCCCGCGAGGCAGCAGCCGGCCTCCGAGTCGCCGCCGACGGACGAGGCGGCAGGGTCTGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | GCGCTCCCATCAGACCCGCCCTCCTCCTCCGCTCCAGCCGAGGGGTaGCCCCGGGCCTGCTCGCCAACGGCCTCTGCCTTCCCGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPSDPPSSSAPAEG*PRACSPTASAFPGA Trigger: TGCTCCCGGGAAGGCAGAGGCCGTTGGCGAGCAGGCCCGGGGGCACCCCTCGGCTGGAGCGGAGGAGGAGGGCGGGTCTGATGGGAGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | GGCGTGGGCGAGGCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATTaGGCCGCCGGCTTGGCCCTCACTTCGGGCTCCGGTCCGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GVGEAAGLVAVSSSD*AAGLALTSGSGPAS Trigger: CGAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGCCTCGCCCACGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | GAGCAGAGGGCTCCTGCGACGGGGACCGCTCCGCCGACTGCGGCGTaGGCGAGGCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EQRAPATGTAPPTAA*ARRPDSSPFPLRIG Trigger: CCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGCCTCGCCCACGCCGCAGTCGGCGGAGCGGTCCCCGTCGCAGGAGCCCTCTGCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | CGGCCGGACTCGTCGCCGTTTCCTCTTCGGATTGGGCCGCCGGCTTaGCCCTCACTTCGGGCTCCGGTCCGGCCTCGGCGTCTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPDSSPFPLRIGPPA*PSLRAPVRPRRLLR Trigger: CCGAAGAAGACGCCGAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGATTGGGCCGCCGGCTaGGCCCTCACTTCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKQGKVRAEARVSPLWTWDWAAG*ALTSGS Trigger: GGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATC...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | CACGTCGTCTACGAAATCCTCGGGGTCGCTGAAGGAGGGCTCATCTaGCTCTCCGTTCTCCAGAGCCCGCGGCTCCGCCTCAGCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVVYEILGVAEGGLI*LSVLQSPRLRLSRA Trigger: AGCGCGGCTGAGGCGGAGCCGCGGGCTCTGGAGAACGGAGAGGCAGATGAGCCCTCCTTCAGCGACCCCGAGGATTTCGTAGACGACGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGGAGTGTTGGGGGCCTaGGTCTCCAGAGCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGAEGTELCRDRRTLGALGVLGA*VSRAAG Trigger: GCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTCC...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | GCCAAGGCACCGTTCATGCTCCTCAGCCCGGCCAGCACCACGAACTaGCCCTGGGGACTCCAGAAGATGGTGTTGGCTTGCTGCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AKAPFMLLSPASTTN*PWGLQKMVLACCLS Trigger: TGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGCCGGGCTGAGGAGCATGAACGGTGCCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | GTAGTTCTTCCTCGCTCACGTCGTCTACGAAATCCTCGGGGTCGCTaGAGGAGGGCTCATCTGCCTCTCCGTTCTCCAGAGCCCGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLPRSRRLRNPRGR*RRAHLPLRSPEPAA Trigger: AGCCGCGGGCTCTGGAGAACGGAGAGGCAGATGAGCCCTCCTTCAGCGACCCCGAGGATTTCGTAGACGACGTGAGCGAGGAAGAACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGACCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACCACGTAGCGGCCAGTaGGGTCCCATTCAACATCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGAEGTELCRDRRTLGAPRSGQ*GPIQHR Trigger: CCGATGTTGAATGGGACCCAACTGGCCGCTACGTGG...TGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | GCACCGTTCATGCTCCTCAGCCCGGCCAGCACCACGAACTGCCCCTaGGGACTCCAGAAGATGGTGTTGGCTTGCTGCTTGTCAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: APFMLLSPASTTNCP*GLQKMVLACCLSNI Trigger: GATGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGCCGGGCTGAGGAGCATGAACGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGACCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACCATCATGGCTCCACTaGAAGATGGGCCAGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGAEGTELCRDRRTLGAPSWLH*KMGQWA Trigger: AGCCCACTGGCCCATCTTCAAGTGGAGCCATGATGG...TGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGCAAACTTACTGCCATaGGGTTCCCAGGCAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PKQGKVRAEARVSPLWTWANLLP*GSQAKA Trigger: AGCCTTTGCCTGGGAACCCAATGGCAGTAAGTTTGC...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAAAGTCGGTGAAGAGGTaGACCCGGAACGTGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CHNLNRWEVWVPPEFLAQKSVKR*TRNVCC Trigger: GCAGCACACGTTCCGGGTCAACCTCTTCACCGACTT...TTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGCTCCAGAAGATGGTGTaGGCTTGCTGCTTGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHRGCHNLNRWEVWVPPELQKMV*ACCLSN Trigger: GTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAG...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGCACTCGCAGTCCAGAGCAAGAAAGCACAGGTAAGAGCCCAGCACGAGGCTGGCAGAAGCGGTCCTaGTTGTTCTTCTGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCTRSPEQESTGKSPARGWQKRS*LFFCRR Trigger: CCTTCTGCAGAAGAACAACAAGGACCGCTTCTGCCA...GCCTCGTGCTGGGCTCTTACCTGTGCTTTCTTGCTCTGGACTGCGAGTGCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACAGGGCAAGGTGAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGTTTCCACCAGTTCCTTaGAAGCTTTGGACTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PKQGKVRAEARVSPLWTWFPPVP*KLWTGS Trigger: TGAGCCAGTCCAAAGCTTCAAAGGAACTGGTGGAAA...CCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTCACCTTGCCCTGTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAATCCCAGTCATCCACGTaGCTGTCCAGCTCGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CHNLNRWEVWVPPEFLAQSQSST*LSSSSV Trigger: CACTGACGAGCTGGACAGCAACGTGGATGACTGGGA...TTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGATTGAGACTGGGTCCTaGACGTCATTCCAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LHRGCHNLNRWEVWVPPEIETGS*TSFQKM Trigger: CATCTTCTGGAATGACGTCAAGGACCCAGTCTCAAT...CTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGCTGAAGGCACAGAGCATTCTTGCAAAGAATTaGCCATCATGGCTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ESRGSSVPAVDLGLKAQSILAKN*PSWLHL Trigger: CAAGTGGAGCCATGATGGCAAATTCTTTGCAAGAAT...GCTCTGTGCCTTCAGCCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | ATCGGAGGCCATGTAGTGCTCTGCAATGTTCATGACGGTGCAGTCTaGAGTGTCGACAAACGCCAAGGCACCGTTCATGCTCCTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IGGHVVLCNVHDGAV*SVDKRQGTVHAPQP Trigger: GGGCTGAGGAGCATGAACGGTGCCTTGGCGTTTGTCGACACTTCAGACTGCACCGTCATGAACATTGCAGAGCACTACATGGCCTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | CTTGTGGCTCCACCACGACACAGAGGTAACCACGTAGCGGCCAGTTaGGTCCCATTCAACATCGGAGGCCATGTAGTGCTCTGCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVAPPRHRGNHVAAS*VPFNIGGHVVLCNV Trigger: AACATTGCAGAGCACTACATGGCCTCCGATGTTGAATGGGACCCAACTGGCCGCTACGTGGTTACCTCTGTGTCGTGGTGGAGCCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTAAATTGCCCAGGTCTTaGAAAGGCTGCTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNLHRGCHNLNRWEVWVPKLPRS*KGCFSG Trigger: TCCAGAGAAGCAGCCTTTCAAAGACCTGGGCAATTT...AGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCAGAGGCTCGAGTGTCCCCGCTGTGGACCTGGGGCTGAAGGCACAGAGCTATCCAGGGTCATTCTaGCAAAGAATTTGCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESRGSSVPAVDLGLKAQSYPGSF*QRICHH Trigger: ATGATGGCAAATTCTTTGCAAGAATGACCCTGGATA...GCTCTGTGCCTTCAGCCCCAGGTCCACAGCGGGGACACTCGAGCCTCTGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | TCCAACCTGCACAGAGGCTGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTTTCTGCCAGTGCAGCTaGCAATCAACCACATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNLHRGCHNLNRWEVWVPFCQCS*QSTTLN Trigger: GTTCAATGTGGTTGATTGCAAGCTGCACTGGCAGAA...AGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCAGCCTCTGTGCAGGTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGCAGAAGCGGTCCTTGTaGTTCTTCTGCAGAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: NRWEVWVPPEFLAQVSGGQKRSL*FFCRRR Trigger: TCGCCTTCTGCAGAAGAACAACAAGGACCGCTTCTG...CCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGACCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTGGCTGGAATATCTTaGTCTTCAGGCACCCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GPGAEGTELCRDRRTLGALAGIS*SSGTQK Trigger: TTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAG...TGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTGTTGGCTTGCTGCTaGTCAAACATCTTGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAEGTELCRDRRTLGALAVLACC*SNILMS Trigger: ACTCATCAAGATGTTTGACAAGCAGCAAGCCAACAC...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGAAGATGGTGTTGGCTaGCTGCTTGTCAAACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGAEGTELCRDRRTLGALEDGVG*LLVKHL Trigger: AAGATGTTTGACAAGCAGCAAGCCAACACCATCTTC...GAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGAAAGCACGGCCATTTTCCGGTATaGCCGGAAGTCCTCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CVGIEEPWVHSQSRARKHGHFPV*PEVLHH Trigger: ATGATGGAGGACTTCCGGCAATACCGGAAAATGGCC...GTGCTTTCTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | TCATGGCTCCACTTGAAGATGGGCCAGTGGGCTGAGCTTTCGCAGTaGAAACCTCTCTTCTTATGGCCCGTGAGGATGTCCCAGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWLHLKMGQWAELSQ*KPLFLWPVRMSQMM Trigger: CATCATCTGGGACATCCTCACGGGCCATAAGAAGAGAGGTTTTCACTGCGAAAGCTCAGCCCACTGGCCCATCTTCAAGTGGAGCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | GGTCCCATTCAACATCGGAGGCCATGTAGTGCTCTGCAATGTTCATaGCGGTGCAGTCTGAAGTGTCGACAAACGCCAAGGCACCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPIQHRRPCSALQCS*RCSLKCRQTPRHRS Trigger: TGAACGGTGCCTTGGCGTTTGTCGACACTTCAGACTGCACCGTCATGAACATTGCAGAGCACTACATGGCCTCCGATGTTGAATGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | AGAGTTCCTGGGCCATTTTCCGGTATTGCCGGAAGTCCTCCATCATaGTCCGCCTTCTTTCCACCAGTTCCTTTGAAGCTTTGGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPGPFSGIAGSPPS*SAFFPPVPLKLWTG Trigger: GCCAGTCCAAAGCTTCAAAGGAACTGGTGGAAAGAAGGCGGACCATGATGGAGGACTTCCGGCAATACCGGAAAATGGCCCAGGAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCATTGCAATCAACCACATaGAACAAATTCCTCACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAEGTELCRDRRTLGALALQSTT*NKFLTR Trigger: CCGAGTGAGGAATTTGTTCAATGTGGTTGATTGCAA...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | CAACAATCACCGAGTCAATCCCGTCCGCTTCCTGAGGCCGATCTTTaGGTACATCACCAAGTAGTTCTTCCTCGCTCACGTCGTCTACGA | + |
|
Preference number: 5 (lower is better) Translates to: QQSPSQSRPLPEADL*VHHQVVLPRSRRLR Trigger: TCGTAGACGACGTGAGCGAGGAAGAACTACTTGGTGATGTACTCAAAGATCGGCCTCAGGAAGCGGACGGGATTGACTCGGTGATTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 90 bp | GGGACGTTGTCTACAACAATCACCGAGTCAATCCCGTCCGCTTCCTaGGGCCGATCTTTGAGTACATCACCAAGTAGTTCTTCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLSTTITESIPSAS*GRSLSTSPSSSSSL Trigger: GAGCGAGGAAGAACTACTTGGTGATGTACTCAAAGATCGGCCTCAGGAAGCGGACGGGATTGACTCGGTGATTGTTGTAGACAACGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | ACATTGAACAAATTCCTCACTCGGATCTCCTGTCTGGTGGGGAGCTaGATCAGGGTCACCCTGGCTGGAATATCTTTGTCTTCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TLNKFLTRISCLVGS*IRVTLAGISLSSGT Trigger: GGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGACAGGAGATCCGAGTGAGGAATTTGTTCAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCTGAAGGCACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCATTGTGGATGACATTTTaGAGTTTCTCAAGTCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GAEGTELCRDRRTLGALALWMTF*SFSSRS Trigger: AGACCGACTTGAGAAACTCAAAAATGTCATCCACAA...TGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGTGCCTTCAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | TTTAATTTGCTTTATCTGATCCTGGCTGAGGAGTGTTGGGGGCCTTaGTCTCCAGAGCAGCTGGCAGAAGCGGTCCTTGTTGTTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FNLLYLILAEECWGP*SPEQLAEAVLVVLL Trigger: CAGAAGAACAACAAGGACCGCTTCTGCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTCCTCAGCCAGGATCAGATAAAGCAAATTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAAGTAAGTGGTGGGTGATGATTTTCCCAAACTaGGAGAAGATCTTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QVGGVGASRVSGTSKWWVMIFPN*EKILWM Trigger: CATCCACAAGATCTTCTCCAAGTTTGGGAAAATCAT...CACCCACCACTTACTTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAACCTGAACAGGTGGGAGGTGTGGGTGCCTCCAGAGTTTCTGGCACAATGCTTGTCAAACATCTaGATGAGTTCAATCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CHNLNRWEVWVPPEFLAQCLSNI*MSSIFP Trigger: CGGGAAGATTGAACTCATCAAGATGTTTGACAAGCA...TTGTGCCAGAAACTCTGGAGGCACCCACACCTCCCACCTGTTCAGGTTGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | CCGGTCTCCGCTCTCAAAAATCACACTGTACTGATCTCTACACTCTaGCTCTTCCAGCCAGTAACGCAAATTGCCCAGGTCTTTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVSALKNHTVLISTL*LFQPVTQIAQVFER Trigger: CCTTTCAAAGACCTGGGCAATTTGCGTTACTGGCTGGAAGAGGCAGAGTGTAGAGATCAGTACAGTGTGATTTTTGAGAGCGGAGACCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTGTGTCGGGATAGAAGAACCCTGGGTGCACTCGCAGTCCAGAGCAAGCAGATCCTTTTTAATTaGCTTTATCTGATCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TELCRDRRTLGALAVQSKQILFN*LYLILA Trigger: AGCCAGGATCAGATAAAGCAAATTAAAAAGGATCTG...CTTGCTCTGGACTGCGAGTGCACCCAGGGTTCTTCTATCCCGACACAGCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | GGAGAAGATCTTGTGGATGACATTTTTGAGTTTCTCAAGTCGGTCTaGCCCCACCTGAGGGACGTTGTCTACAACAATCACCGAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GEDLVDDIFEFLKSV*PHLRDVVYNNHRVN Trigger: ATTGACTCGGTGATTGTTGTAGACAACGTCCCTCAGGTGGGGCCAGACCGACTTGAGAAACTCAAAAATGTCATCCACAAGATCTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 90 bp | ATCATGGTCCGCCTTCTTTCCACCAGTTCCTTTGAAGCTTTGGACTaGCTCAAGCGATCCTTCTGCTCAAAGATCTTGGAGTACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMVRLLSTSSFEALD*LKRSFCSKILEYFF Trigger: GAAGAAGTACTCCAAGATCTTTGAGCAGAAGGATCGCTTGAGCCAGTCCAAAGCTTCAAAGGAACTGGTGGAAAGAAGGCGGACCATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTTAAGAGGAGCCACCAGGAACACTGCAGTGAGGCTCCAATGCAGACACAACTTGGAGAAGATCTaGTGGATGACATTTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QELRGATRNTAVRLQCRHNLEKI*WMTFLS Trigger: ACTCAAAAATGTCATCCACAAGATCTTCTCCAAGTT...GTGTCTGCATTGGAGCCTCACTGCAGTGTTCCTGGTGGCTCCTCTTAACTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | CATGGAAGGTGTTTCATAGATGCTAAGAGTATCCAGGGTCATTCTTaGAAAGAATTTGCCATCATGGCTCCACTTGAAGATGGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGRCFIDAKSIQGHS*KEFAIMAPLEDGPV Trigger: CACTGGCCCATCTTCAAGTGGAGCCATGATGGCAAATTCTTTGCAAGAATGACCCTGGATACTCTTAGCATCTATGAAACACCTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 90 bp | AAGGCTATGATGGTTTCTTTCATCTCAACAACATCAACAGGTACCTaGTTCTCCCTCATTCGGAATATTTCAAAATTTGTGACAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KAMMVSFISTTSTGT*FSLIRNISKFVTTP Trigger: GGGAGTTGTCACAAATTTTGAAATATTCCGAATGAGGGAGAAGCAGGTACCTGTTGATGTTGTTGAGATGAAAGAAACCATCATAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | GCAGAGGGCTCCTGCGACGGGGACCGCTCCGCCGACTaGGGCGTGGGCGAGGCGGCCGGACTCGTCGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: AEGSCDGDRSAD*GVGEAAGLVAV Trigger: AACGGCGACGAGTCCGGCCGCCTCGCCCACGCCGCAGTCGGCGGAGCGGTCCCCGTCGCAGGAGCCCTCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | TCCTCCTCCGCTCCAGCCGAGGGGTGCCCCCGGGCCTaGTCGCCAACGGCCTCTGCCTTCCCGGGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSAPAEGCPRA*SPTASAFPGAE Trigger: CTCTGCTCCCGGGAAGGCAGAGGCCGTTGGCGAGCAGGCCCGGGGGCACCCCTCGGCTGGAGCGGAGGAGGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | GCTCCTGCGACGGGGACCGCTCCGCCGACTGCGGCGTaGGCGAGGCGGCCGGACTCGTCGCCGTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: APATGTAPPTAA*ARRPDSSPFPL Trigger: AAGAGGAAACGGCGACGAGTCCGGCCGCCTCGCCCACGCCGCAGTCGGCGGAGCGGTCCCCGTCGCAGGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | CGGCGTGGGCGAGGCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATaGGGCCGCCGGCTTGGCCCTCACTTCGGGCTCCGGTCCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRGGRTRRRFLFG*GRRLGPHFGLRSGL Trigger: GAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGCCTCGCCCACGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 72 bp | CGAGGCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATaGGGCCGCCGGCTTGGCCCTCACTTCGGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RGGRTRRRFLFG*GRRLGPHFGLR Trigger: CCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGCCTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | GCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATTGGGCCGCCGGCTaGGCCCTCACTTCGGGCTCCGGTCCGGCCTCGGCGTCTTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AAGLVAVSSSDWAAG*ALTSGSGPASASSS Trigger: CGAAGAAGACGCCGAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | TCGTCGCCGTTTCCTCTTCGGATTGGGCCGCCGGCTTaGCCCTCACTTCGGGCTCCGGTCCGGCCTCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPFPLRIGPPA*PSLRAPVRPRR Trigger: ACGCCGAGGCCGGACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | GAGGCGGCCGGACTCGTCGCCGTTTCCTCTTCGGATTaGGCCGCCGGCTTGGCCCTCACTTCGGGCTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EAAGLVAVSSSD*AAGLALTSGSG Trigger: ACCGGAGCCCGAAGTGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCGGCCGCCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | TACGAAATCCTCGGGGTCGCTGAAGGAGGGCTCATCTaGCTCTCCGTTCTCCAGAGCCCGCGGCTCCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: YEILGVAEGGLI*LSVLQSPRLRL Trigger: GAGGCGGAGCCGCGGGCTCTGGAGAACGGAGAGGCAGATGAGCCCTCCTTCAGCGACCCCGAGGATTTCGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | CCGTTCATGCTCCTCAGCCCGGCCAGCACCACGAACTaGCCCTGGGGACTCCAGAAGATGGTGTTGGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PFMLLSPASTTN*PWGLQKMVLAC Trigger: GCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGCCGGGCTGAGGAGCATGAACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | ATGCTCCTCAGCCCGGCCAGCACCACGAACTGCCCCTaGGGACTCCAGAAGATGGTGTTGGCTTGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLLSPASTTNCP*GLQKMVLACCL Trigger: CAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGCCGGGCTGAGGAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | AAGTCGATGAGCTGCACGCCTTGGTGGCTGAACCTCTaGATCTGCTTGAACTTGTCCCCTCCCCAGAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KSMSCTPWWLNL*ICLNLSPPQRA Trigger: CGCCCTCTGGGGAGGGGACAAGTTCAAGCAGATTCAGAGGTTCAGCCACCAAGGCGTGCAGCTCATCGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | CCACCACGACACAGAGGTAACCACGTAGCGGCCAGTTaGGTCCCATTCAACATCGGAGGCCATGTAGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPRHRGNHVAAS*VPFNIGGHVVL Trigger: GAGCACTACATGGCCTCCGATGTTGAATGGGACCCAACTGGCCGCTACGTGGTTACCTCTGTGTCGTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS CCA 72 bp | CTGAGGAGTGTTGGGGGCCTTGGTCTCCAGAGCAGCTaGCAGAAGCGGTCCTTGTTGTTCTTCTGCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSVGGLGLQSS*QKRSLLFFCRR Trigger: CCTTCTGCAGAAGAACAACAAGGACCGCTTCTGCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS CCA 72 bp | CTTTATCTGATCCTGGCTGAGGAGTGTTGGGGGCCTTaGTCTCCAGAGCAGCTGGCAGAAGCGGTCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LYLILAEECWGP*SPEQLAEAVLV Trigger: AACAAGGACCGCTTCTGCCAGCTGCTCTGGAGACCAAGGCCCCCAACACTCCTCAGCCAGGATCAGATAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS CAA 90 bp | CCGGCCAGCACCACGAACTGCCCCTGGGGACTCCAGAAGATGGTGTaGGCTTGCTGCTTGTCAAACATCTTGATGAGTTCAATCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PASTTNCPWGLQKMV*ACCLSNILMSSIFP Trigger: CGGGAAGATTGAACTCATCAAGATGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTGGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | CAGCTGGCAGAAGCGGTCCTTGTTGTTCTTCTGCAGAAGGCGACCTaGGAAGGTCCACAGCCAGTAAGCATTGTCCACCTTGTGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QLAEAVLVVLLQKAT*EGPQPVSIVHLVAP Trigger: TGGAGCCACAAGGTGGACAATGCTTACTGGCTGTGGACCTTCCAAGGTCGCCTTCTGCAGAAGAACAACAAGGACCGCTTCTGCCAGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS TCA 72 bp | CCGAGTCAATCCCGTCCGCTTCCTGAGGCCGATCTTTaGGTACATCACCAAGTAGTTCTTCCTCGCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: PSQSRPLPEADL*VHHQVVLPRSR Trigger: ACGTGAGCGAGGAAGAACTACTTGGTGATGTACTCAAAGATCGGCCTCAGGAAGCGGACGGGATTGACTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | CACTTGAAGATGGGCCAGTGGGCTGAGCTTTCGCAGTaGAAACCTCTCTTCTTATGGCCCGTGAGGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLKMGQWAELSQ*KPLFLWPVRMS Trigger: GGACATCCTCACGGGCCATAAGAAGAGAGGTTTTCACTGCGAAAGCTCAGCCCACTGGCCCATCTTCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | GCCATCATGGCTCCACTTGAAGATGGGCCAGTGGGCTaGGCTTTCGCAGTGAAAACCTCTCTTCTTATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AIMAPLEDGPVG*AFAVKTSLLMA Trigger: GGCCATAAGAAGAGAGGTTTTCACTGCGAAAGCTCAGCCCACTGGCCCATCTTCAAGTGGAGCCATGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | TCTCCTGTCTGGTGGGGAGCTGCATCAGGGTCACCCTaGCTGGAATATCTTTGTCTTCAGGCACCCAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPVWWGAASGSP*LEYLCLQAPKK Trigger: CTTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGACAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | TGTCTGGTGGGGAGCTGCATCAGGGTCACCCTGGCTGGAATATCTTaGTCTTCAGGCACCCAAAAAGCAATGATGTTACCACCCGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLVGSCIRVTLAGIS*SSGTQKAMMLPPGD Trigger: GTCTCCGGGTGGTAACATCATTGCTTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | CCTCTTCCAGCCAGTAACGCAAATTGCCCAGGTCTTTaGAAGGCTGCTTCTCTGGAATGTCCCACTCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPASNANCPGL*KAASLECPTHR Trigger: GCGATGAGTGGGACATTCCAGAGAAGCAGCCTTTCAAAGACCTGGGCAATTTGCGTTACTGGCTGGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | CAACATCGGAGGCCATGTAGTGCTCTGCAATGTTCATaGCGGTGCAGTCTGAAGTGTCGACAAACGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHRRPCSALQCS*RCSLKCRQTPR Trigger: CCTTGGCGTTTGTCGACACTTCAGACTGCACCGTCATGAACATTGCAGAGCACTACATGGCCTCCGATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | AAATTCCTCACTCGGATCTCCTGTCTGGTGGGGAGCTaGATCAGGGTCACCCTGGCTGGAATATCTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KFLTRISCLVGS*IRVTLAGISLS Trigger: AGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGACAGGAGATCCGAGTGAGGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | CTGTCTGGTGGGGAGCTGCATCAGGGTCACCCTGGCTaGAATATCTTTGTCTTCAGGCACCCAAAAAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSGGELHQGHPG*NIFVFRHPKSN Trigger: ATTGCTTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCCCACCAGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 72 bp | CTGCTTCATGTAGAGTTCCTGGGCCATTTTCCGGTATaGCCGGAAGTCCTCCATCATGGTCCGCCTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLHVEFLGHFPV*PEVLHHGPPSF Trigger: GAAAGAAGGCGGACCATGATGGAGGACTTCCGGCAATACCGGAAAATGGCCCAGGAACTCTACATGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS CAA 90 bp | CAGCACCACGAACTGCCCCTGGGGACTCCAGAAGATGGTGTTGGCTaGCTGCTTGTCAAACATCTTGATGAGTTCAATCTTCCCGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QHHELPLGTPEDGVG*LLVKHLDEFNLPVA Trigger: AGCAACGGGAAGATTGAACTCATCAAGATGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | CTCGTTCTTCTGCTTCATGTAGAGTTCCTGGGCCATTTTCCGGTATaGCCGGAAGTCCTCCATCATGGTCCGCCTTCTTTCCACCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVLLLHVEFLGHFPV*PEVLHHGPPSFHQF Trigger: GAACTGGTGGAAAGAAGGCGGACCATGATGGAGGACTTCCGGCAATACCGGAAAATGGCCCAGGAACTCTACATGAAGCAGAAGAACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS TCA 72 bp | TGGCCTGAGGGTCATCCTGAGTGTCCATCAGAGGGCTaGACGTTACCAAGTATCTTTCACACGGAGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: WPEGHPECPSEG*TLPSIFHTERS Trigger: ACTTCTCTCCGTGTGAAAGATACTTGGTAACGTTCAGCCCTCTGATGGACACTCAGGATGACCCTCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | CATGTAGTGCTCTGCAATGTTCATGACGGTGCAGTCTaGAGTGTCGACAAACGCCAAGGCACCGTTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: HVVLCNVHDGAV*SVDKRQGTVHA Trigger: AGCATGAACGGTGCCTTGGCGTTTGTCGACACTTCAGACTGCACCGTCATGAACATTGCAGAGCACTACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 72 bp | ACCACGAACTGCCCCTGGGGACTCCAGAAGATGGTGTaGGCTTGCTGCTTGTCAAACATCTTGATGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TTNCPWGLQKMV*ACCLSNILMSS Trigger: TGAACTCATCAAGATGTTTGACAAGCAGCAAGCCAACACCATCTTCTGGAGTCCCCAGGGGCAGTTCGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | GTATCCAGGGTCATTCTTGCAAAGAATTTGCCATCATaGCTCCACTTGAAGATGGGCCAGTGGGCTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSRVILAKNLPS*LHLKMGQWAEL Trigger: AAGCTCAGCCCACTGGCCCATCTTCAAGTGGAGCCATGATGGCAAATTCTTTGCAAGAATGACCCTGGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 72 bp | GGGAGCTGCATCAGGGTCACCCTGGCTGGAATATCTTaGTCTTCAGGCACCCAAAAAGCAATGATGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GSCIRVTLAGIS*SSGTQKAMMLP Trigger: TGGTAACATCATTGCTTTTTGGGTGCCTGAAGACAAAGATATTCCAGCCAGGGTGACCCTGATGCAGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | TCTACAACAATCACCGAGTCAATCCCGTCCGCTTCCTaGGGCCGATCTTTGAGTACATCACCAAGTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: STTITESIPSAS*GRSLSTSPSSS Trigger: AGAACTACTTGGTGATGTACTCAAAGATCGGCCTCAGGAAGCGGACGGGATTGACTCGGTGATTGTTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS TCA 72 bp | CACGTACGTCTCTGTCCATCTCGCTCTTTCTTCAATTaGGACTGGGTCCTTGACGTCATTCCAGAAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: HVRLCPSRSFFN*DWVLDVIPEDG Trigger: TCCATCTTCTGGAATGACGTCAAGGACCCAGTCTCAATTGAAGAAAGAGCGAGATGGACAGAGACGTACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | GCTCTCAAAAATCACACTGTACTGATCTCTACACTCTaGCTCTTCCAGCCAGTAACGCAAATTGCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALKNHTVLISTL*LFQPVTQIAQV Trigger: GACCTGGGCAATTTGCGTTACTGGCTGGAAGAGGCAGAGTGTAGAGATCAGTACAGTGTGATTTTTGAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | CTTGTGGATGACATTTTTGAGTTTCTCAAGTCGGTCTaGCCCCACCTGAGGGACGTTGTCTACAACAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVDDIFEFLKSV*PHLRDVVYNNH Trigger: GTGATTGTTGTAGACAACGTCCCTCAGGTGGGGCCAGACCGACTTGAGAAACTCAAAAATGTCATCCACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 72 bp | ATGCTAAGAGTATCCAGGGTCATTCTTGCAAAGAATTaGCCATCATGGCTCCACTTGAAGATGGGCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLRVSRVILAKN*PSWLHLKMGQW Trigger: CCACTGGCCCATCTTCAAGTGGAGCCATGATGGCAAATTCTTTGCAAGAATGACCCTGGATACTCTTAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CAA 90 bp | CTTCTGCTCAAAGATCTTGGAGTACTTCTTCAGATCCTTTTTAATTaGCTTTATCTGATCCTGGCTGAGGAGTGTTGGGGGCCTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLKDLGVLLQILFN*LYLILAEECWGPWS Trigger: AGACCAAGGCCCCCAACACTCCTCAGCCAGGATCAGATAAAGCAAATTAAAAAGGATCTGAAGAAGTACTCCAAGATCTTTGAGCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS GCA 72 bp | TCCTTTGAAGCTTTGGACTGGCTCAAGCGATCCTTCTaGTCAAAGATCTTGGAGTACTTCTTCAGATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFEALDWLKRSF*SKILEYFFRSF Trigger: AAAGGATCTGAAGAAGTACTCCAAGATCTTTGAGCAGAAGGATCGCTTGAGCCAGTCCAAAGCTTCAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100507.8 ENSMUST00000199377.2 |
||
| CDS TCA 72 bp | CAAACTTACTGCCATTGGGTTCCCAGGCAAAGGCTATaGTGGTTTCTTTCATCTCAACAACATCAACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QTYCHWVPRQRL*WFLSSQQHQQV Trigger: TACCTGTTGATGTTGTTGAGATGAAAGAAACCATCATAGCCTTTGCCTGGGAACCCAATGGCAGTAAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | TGTTTCATAGATGCTAAGAGTATCCAGGGTCATTCTTaGAAAGAATTTGCCATCATGGCTCCACTTGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CFIDAKSIQGHS*KEFAIMAPLED Trigger: ATCTTCAAGTGGAGCCATGATGGCAAATTCTTTGCAAGAATGACCCTGGATACTCTTAGCATCTATGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS CCA 72 bp | TCATTTATGATTTTCCCAAACTTGGAGAAGATCTTGTaGATGACATTTTTGAGTTTCTCAAGTCGGTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFMIFPNLEKIL*MTFLSFSSRSG Trigger: GCCAGACCGACTTGAGAAACTCAAAAATGTCATCCACAAGATCTTCTCCAAGTTTGGGAAAATCATAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||
| CDS GCA 72 bp | ATGGTTTCTTTCATCTCAACAACATCAACAGGTACCTaGTTCTCCCTCATTCGGAATATTTCAAAATTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVSFISTTSTGT*FSLIRNISKFV Trigger: CACAAATTTTGAAATATTCCGAATGAGGGAGAAGCAGGTACCTGTTGATGTTGTTGAGATGAAAGAAACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100507.8 |
||