Pregenerated sensors for EIF3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024991Ensembl transcript IDs: ENSMUST00000025955.8, ENSMUST00000238125.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTGCTTTGGCAAGCACTaGGGACATGGCCGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGCFGKH*GHGREL Trigger: CAGCTCACGGCCATGTCCTCAGTGCTTGCCAAAGCA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTGTCGTCATCTGTGTaGCGCCAGCTTCCCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLSSSV*RQLPLS Trigger: TGACAGGGGAAGCTGGCGTCACACAGATGACGACAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCAGTCCCCGTCTGGGTaGTCTGTCGTCATCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGQSPSG*SVVICV Trigger: CACACAGATGACGACAGACCACCCAGACGGGGACTG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCCAGCTCTGTCTTCTTaGTCTGCTCTAACCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGPALSS*SALTAP Trigger: GGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAGCATTCCGCCAGGATaGCCGTTCATCATCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSIPPG*PFIIST Trigger: GGTGCTGATGATGAACGGTCATCCTGGCGGAATGCT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGTCACAGTGCCTGGCTaGATCTACTATGGCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGVTVPG*IYYGPF Trigger: GAACGGGCCATAGTAGATGCAGCCAGGCACTGTGAC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTTCTCTCGCTCCTTTaGCTCTTGGCGCAGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLLSLL*LLAQPF Trigger: GAAAGGCTGCGCCAAGAGGCAAAGGAGCGAGAGAAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTCAGAGTCAGCTTCTaGTCCTTTCCTCCAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLRVSF*SFPPGA Trigger: GGCACCTGGAGGAAAGGACCAGAAGCTGACTCTGAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTATTCCCACAGGAACTTaGCCCAGGGAGTCAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGIPTGT*PRESVA Trigger: TGCTACTGACTCCCTGGGTCAAGTTCCTGTGGGAAT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTGAGGACATGGCCGTaGGCTGGTTTCTTATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLRTWP*AGFLSA Trigger: AGCAGATAAGAAACCAGCTCACGGCCATGTCCTCAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTTCTTCTCGCTCTTTaGGCATCTGCTCCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFLLAL*ASAPLP Trigger: GGGCAGAGGAGCAGATGCTCAAAGAGCGAGAAGAAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTACCTGCAGGTCACAGTaGCTGGCTGCATCTACTATG | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGTCRSQ*LAASTM Trigger: CATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTCTGCTCTGAAGGCATaGTCTGCAGATGAGGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSALKA*SADEGQ Trigger: TTGGCCCTCATCTGCAGAGCATGCCTTCAGAGCAGA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCCCTCGGTCATCATCTaGACCTCTCCTGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGPSVII*TSPGNP Trigger: AGGATTTCCAGGAGAGGTGCAGATGATGACCGAGGG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTAGGCCGATTCGTGTaGGTGGGGCTTGAAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLGRFV*VGLEDL Trigger: TAGGTCTTCAAGCCCCACCCACACGAATCGGCCTAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTCTTTCTCGATCTCTTaGAAGAGCTGGGGGAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSFSIS*KSWGRN Trigger: GTTCCTCCCCCAGCTCTTTCAAGAGATCGAGAAAGA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAATTCGTTGGCGCGCTTaGGGGCATTTTCCGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKIRWRA*GHFPAS Trigger: AGAGGCCGGAAAATGCCCTCAAGCGCGCCAACGAAT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTGTCAGTACGATCCTaGGTATCTTCCCCACTTACT | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLSVRS*VSSPLT Trigger: AGTAAGTGGGGAAGATACTCAGGATCGTACTGACAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACGTGTGGGTGGGGCTTaGAGACCTAGCAATGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRVGGA*RPSNVA Trigger: TGCCACATTGCTAGGTCTTCAAGCCCCACCCACACG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTTCTCGCTCTGATCTaGGGGGAGGTCCTCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLLALI*GEVLSD Trigger: ATCGGAGAGGACCTCCCCTCAGATCAGAGCGAGAAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGGGCAGGCTGCTTTTTaGCAACCTCAAGAAATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGGQAAF*QPQEIR Trigger: ACGAATTTCTTGAGGTTGGCAAAAAGCAGCCTGCCC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGTGGCAAGGCGTCGCTaGTTCTCAACTATAATACCA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGVARRR*FSTIIP Trigger: TGGTATTATAGTTGAGAAGCAGCGACGCCTTGCCAC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAGTTCAGCTTCCCTCTaGTCGAGTTCTTCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSSASL*SSSSFS Trigger: TGAGAAGGAAGAACTCGAGCAGAGGGAAGCTGAACT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACGCTCTTTGAGCATCTaGTCCTCTGCCCTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRSLSI*SSALLC Trigger: GCAGAGGAGGGCAGAGGAGCAGATGCTCAAAGAGCG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTCTTCCTCCCGTTTTaGTCTCTCAGCACGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFFLPF*SLSTFS Trigger: AGAGAACGTGCTGAGAGAGCAAAACGGGAGGAAGAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTCAGCTCTCCAGGATaGTTTCTCTTTCTCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLSSPG*FLFLTF Trigger: GAAGGTGAGAAAGAGAAAGCATCCTGGAGAGCTGAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGCAGAAGGCGGAGTATaGTATTGTTCTGGAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGAEGGV*YCSGVV Trigger: CACAACTCCAGAACAATACCATACTCCGCCTTCTGC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACATCCAGTCCCCGTCTaGGTGGTCTGTCGTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKHPVPV*VVCRHL Trigger: CAGATGACGACAGACCACCCAGACGGGGACTGGATG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACATCCAGCCCTCGCCTaGGACCCCTATCATCATCCA | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKHPALA*DPYHHP Trigger: TGGATGATGATAGGGGTCCCAGGCGAGGGCTGGATG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAGAGTTTTAGTGGGTTaGATTCCACCTCCAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGRVLVG*IPPPTS Trigger: ACTGGTTGGAGGTGGAATTCAACCCACTAAAACTCT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTCTCTTGCAGAATGTaGGCAGGTCTGATGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFSCRM*AGLMTS Trigger: TGAAGTCATCAGACCTGCTCACATTCTGCAAGAGAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGCCTTCCGAGTATACTaGAGGCAGAATTTGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGAFRVY*RQNLKA Trigger: AGCTTTCAAATTCTGCCTCCAGTATACTCGGAAGGC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTATGGCCCGTTCCAGTTaGAAAGCATCAACAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGMARSS*KASTKG Trigger: TCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCAT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCGAGCCAGGATCCTCTaGTGCTCTTTTCTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGRARIL*CSFLEF Trigger: AAATTCAAGAAAAGAGCACCAGAGGATCCTGGCTCG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTATAGCACTGTCCAACTaGACAAGTCTGGTTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGIALSN*TSLVSK Trigger: TTTGGAAACCAGACTTGTTCAGTTGGACAGTGCTAT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTCTTCAGGCGTTCCTaGAGTTCCTTCTTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFFRRS*SSFFSF Trigger: GAAAGAAAAGAAGGAACTTCAGGAACGCCTGAAGAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCCATCCACCTGGCTTaGCAAATGGTCTCCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSIHLA*QMVSKD Trigger: GTCCTTGGAGACCATTTGTCAAGCCAGGTGGATGGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGTCAATATCTTTAAATaGTTTGGCGCCCAGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGVNIFK*FGAQLC Trigger: ACAGAGCTGGGCGCCAAAGCATTTAAAGATATTGAC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCCTCTGTCCTCATCTaGTGTACGCCAGCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSSVLI*CTPASS Trigger: AGAGGAAGCTGGCGTACAGCAGATGAGGACAGAGGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACCAAGGACCAGGTCTTaGATCATCACCCCTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKPRTRS*IITPSR Trigger: CCTAGAAGGGGTGATGATGCAAGACCTGGTCCTTGG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCTCCACTCCTTTTCTaGTGGGCCTCTTCTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSPLLF*WASSPL Trigger: GAGTGGAGAAGAGGCCCACCAGAAAAGGAGTGGAGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTACACTCTCAGGAGTCTaGATATTATCCAGATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGTLSGV*ILSRSS Trigger: AGAAGATCTGGATAATATTCAGACTCCTGAGAGTGT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAACATCCAGGGCAGGCTaGTTTTTGCCAACCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKTSRAG*FLPTSR Trigger: TCTTGAGGTTGGCAAAAAGCAGCCTGCCCTGGATGT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGCTCTGATAAATCTGTaGCACCTGTTGCAGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKALINL*HLLQKA Trigger: CGCCTTCTGCAACAGGTGGCACAGATTTATCAGAGC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGCCAGGATCCTCTGGTaGTCTTTTCTTGAATTTTTA | + |
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Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGARILW*SFLEFL Trigger: TAAAAATTCAAGAAAAGAGCACCAGAGGATCCTGGC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAGGCCTATCATCATCTaGATTACGCCAGGAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRPIII*ITPGRT Trigger: CGTCCTTCCTGGCGTAATGCAGATGATGATAGGCCT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATGGCTGCATCTACTATaGCCCGTTCCAGTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKWLHLL*PVPVGK Trigger: CTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGCCTTTCGTACTTTCTaGAGTTCAGCTTCCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKAFRTF*SSASLC Trigger: GCAGAGGGAAGCTGAACTCCAGAAAGTACGAAAGGC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAACCTGGCTTGACAAATaGTCTCCAAGGACCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKTWLDK*SPRTRS Trigger: AGACCTGGTCCTTGGAGACCATTTGTCAAGCCAGGT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTCTCTCCATCCACCTaGCTTGACAAATGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLSPST*LDKWSP Trigger: TGGAGACCATTTGTCAAGCCAGGTGGATGGAGAGAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACAAACACTGCCTGTATaGTTCCCACAGGAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKQTLPV*FPQELD Trigger: GTCAAGTTCCTGTGGGAATCATACAGGCAGTGTTTG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATGGTTATGGTGGCGCTaGATCTGGGATAAGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKWLWWR*IWDKCI Trigger: AATGCACTTATCCCAGATTCAGCGCCACCATAACCA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGTTTCTTATCTGCTCTaGAGGCATGCTCTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKVSYLL*RHALQM Trigger: CATCTGCAGAGCATGCCTTCAGAGCAGATAAGAAAC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGAACAGTTTTCTTCTTaGTTTGCTCGTGTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGEQFSS*FARVLE Trigger: TTCAAGAACACGAGCAAATCAAGAAGAAAACTGTTC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAGAAGGTCCAAACACTaGCTGTATGATTCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRRSKH*LYDSHR Trigger: CCTGTGGGAATCATACAGGCAGTGTTTGGACCTTCT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAACGAGAAAACTCAATaGTCTGATAAATCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGNEKTQ*SDKSVP Trigger: TGGCACAGATTTATCAGAGCATTGAGTTTTCTCGTT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCTGTCTTCTTGATCTaGTCTAACCGCTCCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSVFLI*SNRSRT Trigger: TGTTCGGGAGCGGTTAGAGCAGATCAAGAAGACAGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACCTTCCTTAGCCAAGTaGCTCTTACGAAGATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKPSLAK*LLRRST Trigger: TGTGGATCTTCGTAAGAGCCACTTGGCTAAGGAAGG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTCCAAATGCATAGACTaGCTCTCTGGATTATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSKCID*LSGLLR Trigger: TCTTAATAATCCAGAGAGCCAGTCTATGCATTTGGA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGACATGGCCGTGAGCTaGTTTCTTATCTGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKDMAVS*FLICSE Trigger: TTCAGAGCAGATAAGAAACCAGCTCACGGCCATGTC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAACTGGAGGCAGAATTTaGAAGCTTGTTGGGCGATAT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKTGGRI*KLVGRY Trigger: ATATCGCCCAACAAGCTTTCAAATTCTGCCTCCAGT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTTCTTCTAGTTTCTTaGCTCGCTCCTGATACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLLLVS*LAPDTL Trigger: GAGAGTATCAGGAGCGAGTCAAGAAACTAGAAGAAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTCTGCCATGTTCTGTaGTTCTTACTTTTCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFCHVL*FLLFIT Trigger: TGTAATGAAAAGTAAGAAGCACAGAACATGGCAGAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAGTCTGGTTTCCAAATaGATAGACTGGCTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSLVSK*IDWLSG Trigger: TCCAGAGAGCCAGTCTATGCATTTGGAAACCAGACT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAAGATATGCATTAACTaGCAATTGATGCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGKICIN*QLMLFF Trigger: GAAGAACAGCATCAATTGGCAGTTAATGCATATCTT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTATTGTTCTGGAGTTGTaGTACATATTGTTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGIVLEL*YILLQF Trigger: GAATTGCAACAATATGTACCACAACTCCAGAACAAT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATATCTTCCACAGCTTTaGAGGCTTCCTGCCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKYLPQL*RLPAII Trigger: AATTATGGCAGGAAGCCTTCAAAGCTGTGGAAGATA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATTCTCCTCTCGATCTTaGTTATCTCTGTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKFSSRS*LSLSFS Trigger: AGAGAAGGACAGAGATAATCAAGATCGAGAGGAGAA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGCTTTGAAGGCTTCCTaGCATAATTCCATGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKALKAS*HNSMLI Trigger: TATCAGCATGGAATTATGGCAGGAAGCCTTCAAAGC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGCATTAACTGCCAATTaGTGCTGTTCTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKALTAN*CCSSFS Trigger: AGAGAAAGAAGAACAGCATCAATTGGCAGTTAATGC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCTTCCTTCTCACGTTaGATATTCAGACTCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSSFSR*IFRLSR Trigger: TCTTGAGAGTCTGAATATTCAACGTGAGAAGGAAGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATCTAACACCATTTGTTaGGACTCTTCTTTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSNTIC*DSSLAA Trigger: AGCTGCTAAAGAAGAGTCCCAACAAATGGTGTTAGA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACAACTGAGGCTTAGGTaGTTTCTTAGACAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKQLRLR*FLRQGK Trigger: TTTTCCTTGTCTAAGAAACCACCTAAGCCTCAGTTG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAAGGAAAATAGTCCATaGATATCTTCCACAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKKENSP*ISSTAL Trigger: CAAAGCTGTGGAAGATATTCATGGACTATTTTCCTT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATGTAATAAGTTATTTTaGGTTCTTCTTTCCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKCNKLF*VLLSAA Trigger: GGCAGCGGAAAGAAGAACGCAAAATAACTTATTACA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGTATTTCAGCATAATTaGCTCATGTATCTTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKVFQHN*LMYLLP Trigger: TGGCAGAAGATACATGAGCCAATTATGCTGAAATAC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATTTGTTATAGTAATTTaGCATCAACTGAGGCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKFVIVI*HQLRLR Trigger: CCTAAGCCTCAGTTGATGGCAAATTACTATAACAAA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATTTTCTCGTTCTAGCTaGATTGTAGTGATTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKFSRSS*IVVILS Trigger: AGAAAGAATCACTACAATGCAGCTAGAACGAGAAAA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACATAGACTGGCTCTCTaGATTATTAAGATTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKHRLAL*IIKINC Trigger: GCAATTAATCTTAATAATCCAGAGAGCCAGTCTATG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS CCA 90 bp | AGGCCTCTCATCATCCCGAGTTTCTCGTCTCCACTCCTTTTCTGGTaGGCCTCTTCTCCACTCAGAGTCAGCTTCTGGTCCTTTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPLIIPSFSSPLLFW*ASSPLRVSFWSFPP Trigger: TGGAGGAAAGGACCAGAAGCTGACTCTGAGTGGAGAAGAGGCCCACCAGAAAAGGAGTGGAGACGAGAAACTCGGGATGATGAGAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS CCA 90 bp | GTGAGGCCTCTCATCATCCCGAGTTTCTCGTCTCCACTCCTTTTCTaGTGGGCCTCTTCTCCACTCAGAGTCAGCTTCTGGTCCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRPLIIPSFSSPLLF*WASSPLRVSFWSFP Trigger: AGGAAAGGACCAGAAGCTGACTCTGAGTGGAGAAGAGGCCCACCAGAAAAGGAGTGGAGACGAGAAACTCGGGATGATGAGAGGCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | CCGGGAAGTATGGTCAATACGTACCTGCAGGTCACAGTGCCTGGCTaGATCTACTATGGCCCGTTCCAGTTGGAAAGCATCAACAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSMVNTYLQVTVPG*IYYGPFQLESINKR Trigger: CCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGTACGTATTGACCATACTTCCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS CCA 90 bp | GGTCAATACGTACCTGCAGGTCACAGTGCCTGGCTGCATCTACTATaGCCCGTTCCAGTTGGAAAGCATCAACAAAAGGAACCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GQYVPAGHSAWLHLL*PVPVGKHQQKEPEK Trigger: CTTCTCTGGTTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGTACGTATTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TCTAACCGCTCCCGAACAGTTTTCTTCTTGATTTGCTCGTGTTCTTaGAGGATTCGTTCCTTCTCTCGCTCCTTTGCCTCTTGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNRSRTVFFLICSCS*RIRSFSRSFASWRS Trigger: GCTGCGCCAAGAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAAGAACACGAGCAAATCAAGAAGAAAACTGTTCGGGAGCGGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTAATTCGTTGGCGCGCTaGAGGGCATTTTCCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGNSLAR*RAFSGL Trigger: GAGGCCGGAAAATGCCCTCAAGCGCGCCAACGAATT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | AACCTGACCATATCATTAATTAGGCCGATTCGTGTGGGTGGGGCTTaGAGACCTAGCAATGTGGCAAGGCGTCGCTGCTTCTCAACTATA | + |
|
Preference number: 5 (lower is better) Translates to: NLTISLIRPIRVGGA*RPSNVARRRCFSTI Trigger: TATAGTTGAGAAGCAGCGACGCCTTGCCACATTGCTAGGTCTTCAAGCCCCACCCACACGAATCGGCCTAATTAATGATATGGTCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | GATTTGCTCGTGTTCTTGAAGGATTCGTTCCTTCTCTCGCTCCTTTaGCTCTTGGCGCAGCCTTTCTTCTTCAGCCTTTCGTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLLVFLKDSFLLSLL*LLAQPFFFSLSYFL Trigger: CAGAAAGTACGAAAGGCTGAAGAAGAAAGGCTGCGCCAAGAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAAGAACACGAGCAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | CTTAGTACGACGAAGGGACTCCCTATCTTTCTCAGCTCTCCAGGATaGTTTCTCTTTCTCACCTTCTCGTTCTCGCTCTCTTTCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSTTKGLPIFLSSPG*FLFLTFSFSLSFSI Trigger: GATCGAGAAAGAGAGCGAGAACGAGAAGGTGAGAAAGAGAAAGCATCCTGGAGAGCTGAGAAAGATAGGGAGTCCCTTCGTCGTACTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025955.8 ENSMUST00000238125.2 |
||
| CDS TCA 90 bp | AGGAACTTGACCCAGGGAGTCAGTAGCAATCTGTCAGTACGATCCTaGGTATCTTCCCCACTTACTGCACTTAAGAGAACACTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNLTQGVSSNLSVRS*VSSPLTALKRTLSG Trigger: TCCTGAGAGTGTTCTCTTAAGTGCAGTAAGTGGGGAAGATACTCAGGATCGTACTGACAGATTGCTACTGACTCCCTGGGTCAAGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TTCGAAGAAGGTCCAAACACTGCCTGTATGATTCCCACAGGAACTTaGCCCAGGGAGTCAGTAGCAATCTGTCAGTACGATCCTGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FEEGPNTACMIPTGT*PRESVAICQYDPEY Trigger: ATACTCAGGATCGTACTGACAGATTGCTACTGACTCCCTGGGTCAAGTTCCTGTGGGAATCATACAGGCAGTGTTTGGACCTTCTTCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | TCTCCATCCACCTGGCTTGACAAATGGTCTCCAAGGACCAGGTCTTaGATCATCACCCCTTCTAGGAACCCTATCATCATCCATATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSTWLDKWSPRTRS*IITPSRNPIIIHIS Trigger: AGAAATATGGATGATGATAGGGTTCCTAGAAGGGGTGATGATGCAAGACCTGGTCCTTGGAGACCATTTGTCAAGCCAGGTGGATGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTTTCTTCTCGCTCTTaGAGCATCTGCTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLSSRS*SICSSA Trigger: GGCAGAGGAGCAGATGCTCAAAGAGCGAGAAGAAAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGTTCTTCTGATGGTCTaGATTCTCGAGGTGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGVLLMV*ILEVDP Trigger: GGGGTCCACCTCGAGAATCAAGACCATCAGAAGAAC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | ATGAGGGCCAACTGGGGCATCTTCTCGAGTTGCATAATTCAAATCTaGTCCAAAACTCAGAGTCCGGGAAGTATGGTCAATACGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRANWGIFSSCIIQI*SKTQSPGSMVNTYL Trigger: CAGGTACGTATTGACCATACTTCCCGGACTCTGAGTTTTGGATCAGATTTGAATTATGCAACTCGAGAAGATGCCCCAGTTGGCCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | CAAACTGTTTCAGTTTTTCCTCGTAGACAGACTGCCGGGCAGCTTTaGGGCGCATCACAAATAGATCTCTGTCTTCCAACATTCGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: QTVSVFPRRQTAGQL*GASQIDLCLPTFVT Trigger: TGTCACGAATGTTGGAAGACAGAGATCTATTTGTGATGCGCCTCAAAGCTGCCCGGCAGTCTGTCTACGAGGAAAAACTGAAACAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TGCCGCTTTTTCCTTTCTACTTCTTCTAGTTTCTTGACTCGCTCCTaGTACTCTCTAAGTTCTTCCTCCCGTTTTGCTCTCTCAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: CRFFLSTSSSFLTRS*YSLSSSSRFALSAR Trigger: ACGTGCTGAGAGAGCAAAACGGGAGGAAGAACTTAGAGAGTATCAGGAGCGAGTCAAGAAACTAGAAGAAGTAGAAAGGAAAAAGCGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | TTGCGTTCTTCTTTCCGCTGCCTTTTCCGATCTTCTAGGCGACTATaGCTTTCTTCTGCTAAGCGCTCTTCAAACTGTTTCAGTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRSSFRCLFRSSRRL*LSSAKRSSNCFSFS Trigger: GGAAAAACTGAAACAGTTTGAAGAGCGCTTAGCAGAAGAAAGGCATAGTCGCCTAGAAGATCGGAAAAGGCAGCGGAAAGAAGAACGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | TCTTCCTCTCTGCGCCTTTCCCTTTCTTCAATTTCCAGCTCTCTTTaGCGCTTTTTCCTTTCTACTTCTTCTAGTTTCTTGACTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLRLSLSSISSSL*RFFLSTSSSFLTRS Trigger: GGAGCGAGTCAAGAAACTAGAAGAAGTAGAAAGGAAAAAGCGGCAAAGAGAGCTGGAAATTGAAGAAAGGGAAAGGCGCAGAGAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCAGAGTTTTAGTGGGTaGAATTCCACCTCCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGQSFSG*NSTSNQ Trigger: CTGGTTGGAGGTGGAATTCAACCCACTAAAACTCTG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTATGGCCCGTTCCAGTaGGAAAGCATCAACAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGYGPFQ*ESINKR Trigger: CCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACCTTCTCTCGCTCCTTaGCCTCTTGGCGCAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKPSLAP*PLGAAF Trigger: AAAGGCTGCGCCAAGAGGCAAAGGAGCGAGAGAAGG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTATCATCACGGCGACTaGAATCTCTCCAGCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGYHHGD*NLSSLK Trigger: CTTCAAGCTGGAGAGATTCAAGTCGCCGTGATGATA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TTGAAGGCTTCCTGCCATAATTCCATGCTGATAGCACTGTCCAACTaGACAAGTCTGGTTTCCAAATGCATAGACTGGCTCTCTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LKASCHNSMLIALSN*TSLVSKCIDWLSGL Trigger: TAATCCAGAGAGCCAGTCTATGCATTTGGAAACCAGACTTGTTCAGTTGGACAGTGCTATCAGCATGGAATTATGGCAGGAAGCCTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TTCTGGAGTTCAGCTTCCCTCTGCTCGAGTTCTTCCTTCTCACGTTaGATATTCAGACTCTCAAGACGCTCTTTTCTTTCCTCAATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FWSSASLCSSSSFSR*IFRLSRRSFLSSIV Trigger: GACAATTGAGGAAAGAAAAGAGCGTCTTGAGAGTCTGAATATTCAACGTGAGAAGGAAGAACTCGAGCAGAGGGAAGCTGAACTCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | TCAATATCTTTAAATGCTTTGGCGCCCAGCTCTGTCTTCTTGATCTaGTCTAACCGCTCCCGAACAGTTTTCTTCTTGATTTGCTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SISLNALAPSSVFLI*SNRSRTVFFLICSC Trigger: ACACGAGCAAATCAAGAAGAAAACTGTTCGGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGGGCGCCAAAGCATTTAAAGATATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | CGTGACATCCTATTCTTATGCTCCAGAGCTTTTTCTCGTTCTAGCTaGATTGTAGTGATTCTTTCTTCTTCTTGCTGTTCCCACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDILFLCSRAFSRSS*IVVILSSSCCSHRS Trigger: GGACCTGTGGGAACAGCAAGAAGAAGAAAGAATCACTACAATGCAGCTAGAACGAGAAAAAGCTCTGGAGCATAAGAATAGGATGTCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS CCA 90 bp | TGCCACCTGTTGCAGAAGGCGGAGTATGGTATTGTTCTGGAGTTGTaGTACATATTGTTGCAATTCTGGTTCTTTTTCAGGTTGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHLLQKAEYGIVLEL*YILLQFWFFFRLFP Trigger: AGGGAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAACAGGTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGATTCCCACAGGAACTaGACCCAGGGAGTCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKDSHRN*TQGVSS Trigger: GCTACTGACTCCCTGGGTCAAGTTCCTGTGGGAATC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTACTGGAGGCAGAATTaGAAAGCTTGTTGGGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGYWRQN*KACWAI Trigger: TATCGCCCAACAAGCTTTCAAATTCTGCCTCCAGTA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTGTTCTTCTTTCTCTaGCAGAATGTGAGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLFFFL*QNVSRS Trigger: AGACCTGCTCACATTCTGCAAGAGAAAGAAGAACAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGATTTGCTCGTGTTCTaGAAGGATTCGTTCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGDLLVF*KDSFLL Trigger: GAGAAGGAACGAATCCTTCAAGAACACGAGCAAATC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | TCTGGATTATTAAGATTAATTGCTGTGCTTTGGTTATGGTGGCGCTaGATCTGGGATAAGTGCATTCGCAAGTTGTCACATAGCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLLRLIAVLWLWWR*IWDKCIRKLSHSLR Trigger: CCGCAAGCTATGTGACAACTTGCGAATGCACTTATCCCAGATTCAGCGCCACCATAACCAAAGCACAGCAATTAATCTTAATAATCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 90 bp | CTGTCCCTATCTCGTTCAAGGTCTTTGTCATTCTCCTCTCGATCTTaGTTATCTCTGTCCTTCTCTTTGTCTCTATCCCATTCACGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSRSRSLSFSSRS*LSLSFSLSLSHSRS Trigger: AGAACGTGAATGGGATAGAGACAAAGAGAAGGACAGAGATAATCAAGATCGAGAGGAGAATGACAAAGACCTTGAACGAGATAGGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTATTAATTGCTGTGCTTaGGTTATGGTGGCGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGINCCA*VMVALN Trigger: ATTCAGCGCCACCATAACCAAAGCACAGCAATTAAT...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGGGCATCTTCTCGAGTaGCATAATTCAAATCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGGHLLE*HNSNLI Trigger: GATCAGATTTGAATTATGCAACTCGAGAAGATGCCC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCTTTTCTTTCTCCAGTaGTTCAACCTGTTTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGLFFLQ*FNLFGH Trigger: ATGGCCAAACAGGTTGAACAACTGGAGAAAGAAAAG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGTTCTTCCTCCCGTTTaGCTCTCTCAGCACGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKVLPPV*LSQHVL Trigger: GAGAACGTGCTGAGAGAGCAAAACGGGAGGAAGAAC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTCCATCCACCTGGCTaGACAAATGGTCTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLHPPG*TNGLQG Trigger: TCCTTGGAGACCATTTGTCAAGCCAGGTGGATGGAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAGGGCAGGCTGCTTTTaGCCAACCTCAAGAAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRAGCF*PTSRNS Trigger: CGAATTTCTTGAGGTTGGCAAAAAGCAGCCTGCCCT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTGGTATTGTTCTGGAGTaGTGGTACATATTGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGGIVLE*WYILLQ Trigger: TTGCAACAATATGTACCACAACTCCAGAACAATACC...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTTCTTCCTTCTCACGTaGAATATTCAGACTCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGFFLLT*NIQTLK Trigger: CTTGAGAGTCTGAATATTCAACGTGAGAAGGAAGAA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTCATGTCTTTAACCCTTaGTTCCTCATAAGCACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGHVFNP*FLISTL Trigger: AAGAGTGCTTATGAGGAACAAAGGGTTAAAGACATG...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTCTTTCTCGATCTCTaGAAAGAGCTGGGGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLFLDL*KELGEE Trigger: TTCCTCCCCCAGCTCTTTCAAGAGATCGAGAAAGAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | TATGTTCCCACTTCTACTGATGGGAAAGCTGTCAGATCAGTTGGCTTAAAGGGTTCTAGTAGACATTCTTaGCATCTCTTCTTGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVPTSTDGKAVRSVGLKGSSRHS*HLFLCK Trigger: CTTACACAAGAAGAGATGCAAAGAATGTCTACTAGA...ACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGGGAACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACTTTTCTTTCCTCAATaGTCTGTCTCCGAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLFFPQ*SVSEPG Trigger: TCCTGGCTCGGAGACAGACAATTGAGGAAAGAAAAG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAATTGAATCTCTCCAGCTaGAAGATTCTTCTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKLNLSS*KILLLV Trigger: GACCAGCAGAAGAATCTTCAAGCTGGAGAGATTCAA...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | AGAAGGCGGAGTATGGTATTGTTCTGGAGTTGTGGTACATATTGTTaGAATTCTGGTTCTTTTTCAGGTTGTTCCCTAACCCAATTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RRRSMVLFWSCGTYC*NSGSFSGCSLTQFN Trigger: ATTAAATTGGGTTAGGGAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 90 bp | ACAAATAGATCTCTGTCTTCCAACATTCGTGACATCCTATTCTTATaGTCCAGAGCTTTTTCTCGTTCTAGCTGCATTGTAGTGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TNRSLSSNIRDILFL*SRAFSRSSCIVVIL Trigger: AAGAATCACTACAATGCAGCTAGAACGAGAAAAAGCTCTGGAGCATAAGAATAGGATGTCACGAATGTTGGAAGACAGAGATCTATTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAACGCTCTACTCTAGAATaGTTTCGAAGAAGGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKRSTLE*FRRRSK Trigger: TTTGGACCTTCTTCGAAACAATTCTAGAGTAGAGCG...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGCAGAATTTGAAAGCTaGTTGGGCGATATCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKAEFES*LGDIMV Trigger: TACCATGATATCGCCCAACAAGCTTTCAAATTCTGC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAGTCAATCTTCTTTTCTaGATTCTTCAGGCGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKVNLLF*ILQAFL Trigger: CAGGAACGCCTGAAGAATCAAGAAAAGAAGATTGAC...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCATTACAACCAGTGTTTGTAATGTCTACTACACTGATCAGAAGCTATAAAAGTTGTTCAACCTGTTaGGCCATAATAAAATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPLQPVFVMSTTLIRSYKSCSTC*AIIKSG Trigger: TCCAGATTTTATTATGGCCAAACAGGTTGAACAACT...TTTATAGCTTCTGATCAGTGTAGTAGACATTACAAACACTGGTTGTAATGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS GCA 72 bp | ATGGTCAATACGTACCTGCAGGTCACAGTGCCTGGCTaGATCTACTATGGCCCGTTCCAGTTGGAAAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: MVNTYLQVTVPG*IYYGPFQLESI Trigger: GATGCTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGTACGTATTGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS CAA 72 bp | GTCGACGGTCTTCCCTGTCCCTATCATCACGGCGACTaGAATCTCTCCAGCTTGAAGATTCTTCTGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VDGLPCPYHHGD*NLSSLKILLLV Trigger: GACCAGCAGAAGAATCTTCAAGCTGGAGAGATTCAAGTCGCCGTGATGATAGGGACAGGGAAGACCGTCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025955.8 ENSMUST00000238125.2 |
||
| CDS CAA 90 bp | CTTTCTCTTTCTCACCTTCTCGTTCTCGCTCTCTTTCTCGATCTCTaGAAAGAGCTGGGGGAGGAACACGACGAGGTGGATCCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLSHLLVLALFLDL*KELGEEHDEVDPSL Trigger: AAGAGAGGGATCCACCTCGTCGTGTTCCTCCCCCAGCTCTTTCAAGAGATCGAGAAAGAGAGCGAGAACGAGAAGGTGAGAAAGAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025955.8 ENSMUST00000238125.2 |
||
| CDS TCA 72 bp | ATATCATTAATTAGGCCGATTCGTGTGGGTGGGGCTTaGAGACCTAGCAATGTGGCAAGGCGTCGCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLIRPIRVGGA*RPSNVARRRCF Trigger: GAAGCAGCGACGCCTTGCCACATTGCTAGGTCTTCAAGCCCCACCCACACGAATCGGCCTAATTAATGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 72 bp | AGCAGGTCTGATGACTTCAAGTGCTTTGGCAAGCACTaGGGACATGGCCGTGAGCTGGTTTCTTATCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSDDFKCFGKH*GHGRELVSYLL Trigger: GAGCAGATAAGAAACCAGCTCACGGCCATGTCCTCAGTGCTTGCCAAAGCACTTGAAGTCATCAGACCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
||
| CDS TCA 72 bp | TGCGTCTCCAAGAGCTTGCTTCTTCTCGCTCTGATCTaGGGGGAGGTCCTCTCCGATCTCTATCATCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CVSKSLLLLALI*GEVLSDLYHLL Trigger: TAAGAGATGATAGAGATCGGAGAGGACCTCCCCTCAGATCAGAGCGAGAAGAAGCAAGCTCTTGGAGACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025955.8 ENSMUST00000238125.2 |
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| CDS GCA 72 bp | GTGTTCTTGAAGGATTCGTTCCTTCTCTCGCTCCTTTaGCTCTTGGCGCAGCCTTTCTTCTTCAGCCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: VFLKDSFLLSLL*LLAQPFFFSLS Trigger: CGAAAGGCTGAAGAAGAAAGGCTGCGCCAAGAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAAGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | GTACCTGCAGGTCACAGTGCCTGGCTGCATCTACTATaGCCCGTTCCAGTTGGAAAGCATCAACAAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VPAGHSAWLHLL*PVPVGKHQQKE Trigger: TTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | AAGTATGGTCAATACGTACCTGCAGGTCACAGTGCCTaGCTGCATCTACTATGGCCCGTTCCAGTTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KYGQYVPAGHSA*LHLLWPVPVGK Trigger: CTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGTGACCTGCAGGTACGTATTGACCATACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | GGTCCAAACACTGCCTGTATGATTCCCACAGGAACTTaGCCCAGGGAGTCAGTAGCAATCTGTCAGTACGAT | + |
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Preference number: 6 (lower is better) Translates to: GPNTACMIPTGT*PRESVAICQYD Trigger: ATCGTACTGACAGATTGCTACTGACTCCCTGGGTCAAGTTCCTGTGGGAATCATACAGGCAGTGTTTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | ACCTGGCTTGACAAATGGTCTCCAAGGACCAGGTCTTaGATCATCACCCCTTCTAGGAACCCTATCATCATC | + |
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Preference number: 6 (lower is better) Translates to: TWLDKWSPRTRS*IITPSRNPIII Trigger: GATGATGATAGGGTTCCTAGAAGGGGTGATGATGCAAGACCTGGTCCTTGGAGACCATTTGTCAAGCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | AGGTCCAAACACTGCCTGTATGATTCCCACAGGAACTaGACCCAGGGAGTCAGTAGCAATCTGTCAGTACGA | + |
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Preference number: 6 (lower is better) Translates to: RSKHCLYDSHRN*TQGVSSNLSVR Trigger: TCGTACTGACAGATTGCTACTGACTCCCTGGGTCAAGTTCCTGTGGGAATCATACAGGCAGTGTTTGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | TCAGTTTTTCCTCGTAGACAGACTGCCGGGCAGCTTTaGGGCGCATCACAAATAGATCTCTGTCTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: SVFPRRQTAGQL*GASQIDLCLPT Trigger: TGTTGGAAGACAGAGATCTATTTGTGATGCGCCTCAAAGCTGCCCGGCAGTCTGTCTACGAGGAAAAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | TTCAAATCTGATCCAAAACTCAGAGTCCGGGAAGTATaGTCAATACGTACCTGCAGGTCACAGTGCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FKSDPKLRVREV*SIRTCRSQCLA Trigger: AGCCAGGCACTGTGACCTGCAGGTACGTATTGACCATACTTCCCGGACTCTGAGTTTTGGATCAGATTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | ACAGTGCCTGGCTGCATCTACTATGGCCCGTTCCAGTaGGAAAGCATCAACAAAAGGAACCAGAGAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: TVPGCIYYGPFQ*ESINKRNQRSQ Trigger: TTGACTTCTCTGGTTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCCATAGTAGATGCAGCCAGGCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | TTGAAGGATTCGTTCCTTCTCTCGCTCCTTTGCCTCTaGGCGCAGCCTTTCTTCTTCAGCCTTTCGTACTTT | + |
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Preference number: 6 (lower is better) Translates to: LKDSFLLSLLCL*AQPFFFSLSYF Trigger: AAAGTACGAAAGGCTGAAGAAGAAAGGCTGCGCCAAGAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | AAGGCATGCTCTGCAGATGAGGGCCAACTGGGGCATCTTCTCGAGTaGCATAATTCAAATCTGATCCAAAACTCAGAGTCCGGGAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KACSADEGQLGHLLE*HNSNLIQNSESGKY Trigger: ATACTTCCCGGACTCTGAGTTTTGGATCAGATTTGAATTATGCAACTCGAGAAGATGCCCCAGTTGGCCCTCATCTGCAGAGCATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | GGATCCAGTTCTTCAAGGTCTTCAATGTCAATATCTTTAAATGCTTaGGCGCCCAGCTCTGTCTTCTTGATCTGCTCTAACCGCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GSSSSRSSMSISLNA*APSSVFLICSNRSR Trigger: TCGGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGGGCGCCAAAGCATTTAAAGATATTGACATTGAAGACCTTGAAGAACTGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | ACCCAGGGAGTCAGTAGCAATCTGTCAGTACGATCCTaGGTATCTTCCCCACTTACTGCACTTAAGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: TQGVSSNLSVRS*VSSPLTALKRT Trigger: TGTTCTCTTAAGTGCAGTAAGTGGGGAAGATACTCAGGATCGTACTGACAGATTGCTACTGACTCCCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | TCTTTCCGCTGCCTTTTCCGATCTTCTAGGCGACTATaGCTTTCTTCTGCTAAGCGCTCTTCAAACTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFRCLFRSSRRL*LSSAKRSSNCF Trigger: GAAACAGTTTGAAGAGCGCTTAGCAGAAGAAAGGCATAGTCGCCTAGAAGATCGGAAAAGGCAGCGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | TCTGCAGATGAGGGCCAACTGGGGCATCTTCTCGAGTaGCATAATTCAAATCTGATCCAAAACTCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SADEGQLGHLLE*HNSNLIQNSES Trigger: GGACTCTGAGTTTTGGATCAGATTTGAATTATGCAACTCGAGAAGATGCCCCAGTTGGCCCTCATCTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | CTCCCGAACAGTTTTCTTCTTGATTTGCTCGTGTTCTaGAAGGATTCGTTCCTTCTCTCGCTCCTTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPNSFLLDLLVF*KDSFLLSLLCL Trigger: GAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAAGAACACGAGCAAATCAAGAAGAAAACTGTTCGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | TCCTGCCATAATTCCATGCTGATAGCACTGTCCAACTaGACAAGTCTGGTTTCCAAATGCATAGACTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SCHNSMLIALSN*TSLVSKCIDWL Trigger: GAGCCAGTCTATGCATTTGGAAACCAGACTTGTTCAGTTGGACAGTGCTATCAGCATGGAATTATGGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | TCCCGAACAGTTTTCTTCTTGATTTGCTCGTGTTCTTaGAGGATTCGTTCCTTCTCTCGCTCCTTTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRTVFFLICSCS*RIRSFSRSFAS Trigger: AGAGGCAAAGGAGCGAGAGAAGGAACGAATCCTTCAAGAACACGAGCAAATCAAGAAGAAAACTGTTCGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | TTAAATGCTTTGGCGCCCAGCTCTGTCTTCTTGATCTaGTCTAACCGCTCCCGAACAGTTTTCTTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: LNALAPSSVFLI*SNRSRTVFFLI Trigger: AATCAAGAAGAAAACTGTTCGGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGGGCGCCAAAGCATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | GCCACCTGTTGCAGAAGGCGGAGTATGGTATTGTTCTaGAGTTGTGGTACATATTGTTGCAATTCTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATCCRRRSMVLF*SCGTYCCNSGS Trigger: AGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAACAGGTGGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | ATATCTTTAAATGCTTTGGCGCCCAGCTCTGTCTTCTaGATCTGCTCTAACCGCTCCCGAACAGTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISLNALAPSSVF*ICSNRSRTVFF Trigger: GAAGAAAACTGTTCGGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGGGCGCCAAAGCATTTAAAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | CTGTGCCACCTGTTGCAGAAGGCGGAGTATGGTATTGTTCTGGAGTaGTGGTACATATTGTTGCAATTCTGGTTCTTTTTCAGGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCHLLQKAEYGIVLE*WYILLQFWFFFRLF Trigger: GAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAACAGGTGGCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | CAAAAGGAACCAGAGAAGTCAAACGAGAAAACTCAATaGTCTGATAAATCTGTGCCACCTGTTGCAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QKEPEKSNEKTQ*SDKSVPPVAEG Trigger: GCCTTCTGCAACAGGTGGCACAGATTTATCAGAGCATTGAGTTTTCTCGTTTGACTTCTCTGGTTCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | GATAAATCTGTGCCACCTGTTGCAGAAGGCGGAGTATaGTATTGTTCTGGAGTTGTGGTACATATTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DKSVPPVAEGGV*YCSGVVVHIVA Trigger: TGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAACAGGTGGCACAGATTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | ATCTGTGCCACCTGTTGCAGAAGGCGGAGTATGGTATaGTTCTGGAGTTGTGGTACATATTGTTGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ICATCCRRRSMV*FWSCGTYCCNS Trigger: AGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAACAGGTGGCACAGAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | TTTCTGGAGTTCAGCTTCCCTCTGCTCGAGTTCTTCCTTCTCACGTaGAATATTCAGACTCTCAAGACGCTCTTTTCTTTCCTCAATTGT | + |
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Preference number: 6 (lower is better) Translates to: FLEFSFPLLEFFLLT*NIQTLKTLFSFLNC Trigger: ACAATTGAGGAAAGAAAAGAGCGTCTTGAGAGTCTGAATATTCAACGTGAGAAGGAAGAACTCGAGCAGAGGGAAGCTGAACTCCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | TCAATGTCAATATCTTTAAATGCTTTGGCGCCCAGCTCTGTCTTCTaGATCTGCTCTAACCGCTCCCGAACAGTTTTCTTCTTGATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SMSISLNALAPSSVF*ICSNRSRTVFFLIC Trigger: GCAAATCAAGAAGAAAACTGTTCGGGAGCGGTTAGAGCAGATCAAGAAGACAGAGCTGGGCGCCAAAGCATTTAAAGATATTGACATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | AACTGGGGCATCTTCTCGAGTTGCATAATTCAAATCTaGTCCAAAACTCAGAGTCCGGGAAGTATGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: NWGIFSSCIIQI*SKTQSPGSMVN Trigger: ATTGACCATACTTCCCGGACTCTGAGTTTTGGATCAGATTTGAATTATGCAACTCGAGAAGATGCCCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | TTCCTTTCTACTTCTTCTAGTTTCTTGACTCGCTCCTaGTACTCTCTAAGTTCTTCCTCCCGTTTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSTSSSFLTRS*YSLSSSSRFAL Trigger: GAGAGCAAAACGGGAGGAAGAACTTAGAGAGTATCAGGAGCGAGTCAAGAAACTAGAAGAAGTAGAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | CGTTCTAGCTGCATTGTAGTGATTCTTTCTTCTTCTTaGTGTTCCCACAGGTCCATGTCTTTAACCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RSSCIVVILSSS*CSHRSMSLTLC Trigger: ACAAAGGGTTAAAGACATGGACCTGTGGGAACAGCAAGAAGAAGAAAGAATCACTACAATGCAGCTAGAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS TCA 72 bp | TTAAGATTAATTGCTGTGCTTTGGTTATGGTGGCGCTaGATCTGGGATAAGTGCATTCGCAAGTTGTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LRLIAVLWLWWR*IWDKCIRKLSH Trigger: ATGTGACAACTTGCGAATGCACTTATCCCAGATTCAGCGCCACCATAACCAAAGCACAGCAATTAATCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | TCTCTGTCTTCCAACATTCGTGACATCCTATTCTTATaGTCCAGAGCTTTTTCTCGTTCTAGCTGCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLSSNIRDILFL*SRAFSRSSCIV Trigger: TACAATGCAGCTAGAACGAGAAAAAGCTCTGGAGCATAAGAATAGGATGTCACGAATGTTGGAAGACAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | TTGCAGAAGGCGGAGTATGGTATTGTTCTGGAGTTGTaGTACATATTGTTGCAATTCTGGTTCTTTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQKAEYGIVLEL*YILLQFWFFFR Trigger: CCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 72 bp | GCGGAGTATGGTATTGTTCTGGAGTTGTGGTACATATaGTTGCAATTCTGGTTCTTTTTCAGGTTGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEYGIVLELWYI*LQFWFFFRLFP Trigger: AGGGAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CAA 90 bp | TTGCAGAAGGCGGAGTATGGTATTGTTCTGGAGTTGTGGTACATATaGTTGCAATTCTGGTTCTTTTTCAGGTTGTTCCCTAACCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LQKAEYGIVLELWYI*LQFWFFFRLFPNPI Trigger: AATTGGGTTAGGGAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACTCCGCCTTCTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS GCA 72 bp | AGTATGGTATTGTTCTGGAGTTGTGGTACATATTGTTaGAATTCTGGTTCTTTTTCAGGTTGTTCCCTAACC | + |
|
Preference number: 6 (lower is better) Translates to: SMVLFWSCGTYC*NSGSFSGCSLT Trigger: GGTTAGGGAACAACCTGAAAAAGAACCAGAATTGCAACAATATGTACCACAACTCCAGAACAATACCATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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| CDS CCA 72 bp | AACAAGTCTGGTTTCCAAATGCATAGACTGGCTCTCTaGATTATTAAGATTAATTGCTGTGCTTTGGTTATG | + |
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Preference number: 6 (lower is better) Translates to: NKSGFQMHRLAL*IIKINCCALVM Trigger: CATAACCAAAGCACAGCAATTAATCTTAATAATCCAGAGAGCCAGTCTATGCATTTGGAAACCAGACTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025955.8 |
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