Pregenerated sensors for EIF2S3Y (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069049Ensembl transcript IDs: ENSMUST00000091197.4
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTAAAGTGGCAAGATCCTaGCGAGAAAGATGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTKVARS*RERCGC Trigger: GCAGCCGCATCTTTCTCGTCAGGATCTTGCCACTTT...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR GCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTACAGCACCAAGGACCTaGCCAACCATTCTATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTTAPRT*PTILSA Trigger: AGCAGATAGAATGGTTGGGCAGGTCCTTGGTGCTGT...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR CCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTACGCCTCTTCTTATCTaGCCCCAACCAATTAAACGC | + |
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Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTTPLLI*PQPIKR Trigger: GCGTTTAATTGGTTGGGGCCAGATAAGAAGAGGCGT...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR TCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTTGGTCGAGGACAACTTaGGTCATCAAGCTTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTWSRTT*VIKLIN Trigger: ATTTATAAGCTTGATGACTCAAGTTGTCCTCGACCA...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR CCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTTTCATCATCTATTGTTaGCTTGATAGTCACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTFIIYC*LDSHAS Trigger: AGAGGCGTGACTATCAAGCCAACAATAGATGATGAA...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR TCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTTTCTTGGATAGCTTTTaGACTTTTGCTGCTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTFLDSF*TFAAFL Trigger: CAAGAAAGCAGCAAAAGTTCAAAAGCTATCCAAGAA...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR GCA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTTGTACCCTGTACAAATaGAAGTATCTGTTCATACTG | + |
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Preference number: 4 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTCTLYK*KYLFIL Trigger: CAGTATGAACAGATACTTGCATTTGTACAGGGTACA...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR CAA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTGAAAGCGGAGTCAACTaGGTAACATCCAAAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTESGVN*VTSKVA Trigger: TGCCACTTTGGATGTTACCAAGTTGACTCCGCTTTC...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR CAA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTCTGGTCGAGGACAACTaGAGTCATCAAGCTTATAAA | + |
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Preference number: 5 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTLVEDN*SHQAYK Trigger: TTTATAAGCTTGATGACTCAAGTTGTCCTCGACCAG...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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| CDS-3UTR CAA 90 bp | AAGAAAAACTTTCTTTACTGTAAGTTCAGTGGTGCACAGCAACAGTTGTTAACTTCTGTGCATACTGGATaGGTTAGAACAATTTTACCC | + |
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Preference number: 5 (lower is better) Translates to: KKNFLYCKFSGAQQQLLTSVHTG*VRTILP Trigger: GGGTAAAATTGTTCTAACCAATCCAGTATGCACAGA...AGTTAACAACTGTTGCTGTGCACCACTGAACTTACAGTAAAGAAAGTTTTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091197.4 |
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