Pregenerated sensors for EIF2S3X (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035150Ensembl transcript IDs: ENSMUST00000050328.15
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCACCATCCCTCATTGGATATAGCACTCTGGACAGCTGGCCCTaGCACTTGTCTGTTATGAGGTGGTGTGGATGGGACACCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: LPPSLIGYSTLDSWP*HLSVMRWCGWDTLP Trigger: GGGGAGGGTGTCCCATCCACACCACCTCATAACAGACAAGTGGCAGGGCCAGCTGTCCAGAGTGCTATATCCAATGAGGGATGGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 90 bp | TCGAATGGTGGGGATCGTGAAAGGGCCACCCTGCTGTTCCAAAGCTaGAGGATCTCTATGACACAGCGCAGCAACAGGATAACTGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: SNGGDRERATLLFQS*RISMTQRSNRITGG Trigger: CCCTCCAGTTATCCTGTTGCTGCGCTGTGTCATAGAGATCCTGCAGCTTTGGAACAGCAGGGTGGCCCTTTCACGATCCCCACCATTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 90 bp | GCAGCACGGCATGAGAAGAGGAACACAAGGTCTTGTAGACCTCCATaGCACCCACAGTCCTGCCCTCCAGTGCATAAGCATAGATACCTG | + |
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Preference number: 1 (lower is better) Translates to: AARHEKRNTRSCRPP*HPQSCPPVHKHRYL Trigger: CAGGTATCTATGCTTATGCACTGGAGGGCAGGACTGTGGGTGGCATGGAGGTCTACAAGACCTTGTGTTCCTCTTCTCATGCCGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 90 bp | ATTATTACCACTAGGGAACACTGGGTGTCTGAGGCTGTGCAGGTCTaGCACCATCCCTCATTGGATATAGCACTCTGGACAGCTGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: IITTREHWVSEAVQV*HHPSLDIALWTAGP Trigger: AGGGCCAGCTGTCCAGAGTGCTATATCCAATGAGGGATGGTGGCAGACCTGCACAGCCTCAGACACCCAGTGTTCCCTAGTGGTAATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 90 bp | AAGAGGAACACAAGGTCTTGTAGACCTCCATGCCACCCACAGTCCTaGCCTCCAGTGCATAAGCATAGATACCTGCTTGTCACCATGACA | + |
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Preference number: 1 (lower is better) Translates to: KRNTRSCRPPCHPQS*PPVHKHRYLLVTMT Trigger: TGTCATGGTGACAAGCAGGTATCTATGCTTATGCACTGGAGGGCAGGACTGTGGGTGGCATGGAGGTCTACAAGACCTTGTGTTCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 90 bp | AAAGCAGCCTGGACAGAACCTTGTCAATTATCACTAACCACCAGTTaGTATACTCTTTGCCAGTGTGGGAAGACTGAGATACTAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: KAAWTEPCQLSLTTS*YTLCQCGKTEILGI Trigger: TATGCCTAGTATCTCAGTCTTCCCACACTGGCAAAGAGTATAGCAACTGGTGGTTAGTGATAATTGACAAGGTTCTGTCCAGGCTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR TCA 90 bp | TTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCCTAGCTTaGTGGCCAAACCTTGTCTTATGCCTAGGACTCATAAAAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: FIRGRADGSPLFILA*WPNLVLCLGLIKIK Trigger: TTTGATTTTTATGAGTCCTAGGCATAAGACAAGGTTTGGCCATCAAGCTAGGATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR TCA 90 bp | GGAGGCACGTGGGGAATAGATTTAGAAACCAGAGGACACAGTTTCTaGACAATTTCTACCTCTCTCAAGGCTCAAAGATTACCAATAACA | + |
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Preference number: 1 (lower is better) Translates to: GGTWGIDLETRGHSF*TISTSLKAQRLPIT Trigger: TGTTATTGGTAATCTTTGAGCCTTGAGAGAGGTAGAAATTGTTCAGAAACTGTGTCCTCTGGTTTCTAAATCTATTCCCCACGTGCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 90 bp | GAACACTGGGTGTCTGAGGCTGTGCAGGTCTGCCACCATCCCTCATaGGATATAGCACTCTGGACAGCTGGCCCTGCCACTTGTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: EHWVSEAVQVCHHPS*DIALWTAGPATCLL Trigger: TAACAGACAAGTGGCAGGGCCAGCTGTCCAGAGTGCTATATCCAATGAGGGATGGTGGCAGACCTGCACAGCCTCAGACACCCAGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | TGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGGGGTGTCTGAGGCTGTaGAGGTCTGCCACCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: WREVACYKWASLPSGPCLGCLRL*RSATIP Trigger: AGGGATGGTGGCAGACCTGCACAGCCTCAGACACCC...CAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGTGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTAGCACTCTGGACAGCTaGCCCTGCCACTTGTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: QGWREVACYKWASLPSGPSTLDS*PCHLSV Trigger: AACAGACAAGTGGCAGGGCCAGCTGTCCAGAGTGCT...AGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCACCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCTCAGCTACCATCCTGGCCCTTATCCGGGGCTCTGAATTGACCCACCTATTGGATATGAGGGGATaGATGGGATTGGGCTACATG | + |
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Preference number: 2 (lower is better) Translates to: TSSATILALIRGSELTHLLDMRG*MGLGYM Trigger: CATGTAGCCCAATCCCATTCATCCCCTCATATCCAA...TAGGTGGGTCAATTCAGAGCCCCGGATAAGGGCCAGGATGGTAGCTGAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | GAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTGGTGAAAGGGCCACCCTaGTGTTCCAAAGCTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EVACYKWASLPSGPCLSLVKGPP*CSKAAG Trigger: TCCTGCAGCTTTGGAACAGCAGGGTGGCCCTTTCAC...CAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | GAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTGCTGGACAGCTGGCCCTaGCACTTGTCTGTTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: EVACYKWASLPSGPCLSLLDSWP*HLSVMR Trigger: CCTCATAACAGACAAGTGGCAGGGCCAGCTGTCCAG...CAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCTCAGCTACCATCCTGGCCCTTATCCGGGGCTCTGAATTGACCCACCTAGCTTTGTTCTGTTGTTaGTGTGCTACTTTGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSSATILALIRGSELTHLALFCC*CATLGE Trigger: CTCCCCCAAAGTAGCACACCAACAACAGAACAAAGC...TAGGTGGGTCAATTCAGAGCCCCGGATAAGGGCCAGGATGGTAGCTGAGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | TGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGTTGGATATAGCACTCTaGACAGCTGGCCCTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: WREVACYKWASLPSGPCLLDIAL*TAGPAT Trigger: AGTGGCAGGGCCAGCTGTCCAGAGTGCTATATCCAA...CAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 90 bp | GAAGCTACAGCTTCCACGATGGCATGTTTTCTAGGCTTTGTTCTGTaGTTGGTGTGCTACTTTGGGGGAGGTCGCATGGGCAAAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: EATASTMACFLGFVL*LVCYFGGGRMGKGW Trigger: CCAACCTTTGCCCATGCGACCTCCCCCAAAGTAGCACACCAACAACAGAACAAAGCCTAGAAAACATGCCATCGTGGAAGCTGTAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR TCA 90 bp | AGCAACCAGCAGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCGGCAAAGGTTGGATATaGGGGGATGAATGGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: SNQQRPLIGGIVLYQGQSGKGWI*GDEWDW Trigger: CCAATCCCATTCATCCCCTCATATCCAACCTTTGCC...GCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCTGCTGGTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCGCTGCAGGATCTCTATaGCACAGCGCAGCAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVVLFFIRGRADGSPLFIAAGSL*HSAATG Trigger: TCCTGTTGCTGCGCTGTGTCATAGAGATCCTGCAGC...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCGAGGCTGTGCAGGTCTaGCACCATCCCTCATTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LVVLFFIRGRADGSPLFIEAVQV*HHPSLD Trigger: ATCCAATGAGGGATGGTGGCAGACCTGCACAGCCTC...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | AGCAACCAGCAGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCTTGTCTGTTATGAGGTaGTGTGGATGGGACACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SNQQRPLIGGIVLYQGQSLSVMR*CGWDTL Trigger: GAGGGTGTCCCATCCACACCACCTCATAACAGACAA...GCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCTGCTGGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCGTGGATCCACAGTGGTaGGTCAGTGTCCATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LVVLFFIRGRADGSPLFIVDPQW*VSVHGS Trigger: TGAGCCATGGACACTGACCCACCACTGTGGATCCAC...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CCA 90 bp | AGCAACCAGCAGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCGTGGGTCAGTGTCCATaGCTCATTATTACCACTAGG | + |
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Preference number: 2 (lower is better) Translates to: SNQQRPLIGGIVLYQGQSVGQCP*LIITTR Trigger: CCTAGTGGTAATAATGAGCCATGGACACTGACCCAC...GCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCTGCTGGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | CCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTAGTCCTGCCCTCCAGTaGATAAGCATAGATACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PYWWYCSLSGAEQMAVLCSPALQ*ISIDTC Trigger: GCAGGTATCTATGCTTATGCACTGGAGGGCAGGACT...ACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAATAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 90 bp | CTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCCTAGCTaGATGGCCAAACCTTGTCTTATGCCTAGGACTCATAAAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: LYQGQSRWQSFVHPS*MAKPCLMPRTHKNQ Trigger: TTGATTTTTATGAGTCCTAGGCATAAGACAAGGTTTGGCCATCAAGCTAGGATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCTGGGATTGGGCTACATaGTGTCAAACAAGGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: LVVLFFIRGRADGSPLFIWDWAT*CQTRNQ Trigger: TTGATTCCTTGTTTGACATCATGTAGCCCAATCCCA...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR GCA 90 bp | AGCAACCAGCAGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCCCAAACCTTGTCTTATaGCTAGGACTCATAAAAATC | + |
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Preference number: 2 (lower is better) Translates to: SNQQRPLIGGIVLYQGQSPNLVL*LGLIKI Trigger: GATTTTTATGAGTCCTAGGCATAAGACAAGGTTTGG...GCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCTGCTGGTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | GGCCCAGGCTCTCACAAGCCGCAGCACTTGGAAGAATaGGCCCCAGCTGACCAGCTCAGCTACCATCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GPGSHKPQHLEE*APADQLSYHPG Trigger: GCCAGGATGGTAGCTGAGCTGGTCAGCTGGGGCCCATTCTTCCAAGTGCTGCGGCTTGTGAGAGCCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR TCA 72 bp | GCACTCTGGACAGCTGGCCCTGCCACTTGTCTGTTATaGGGTGGTGTGGATGGGACACCCTCCCCCGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: ALWTAGPATCLL*GGVDGTPSPVA Trigger: GGCAACGGGGGAGGGTGTCCCATCCACACCACCTCATAACAGACAAGTGGCAGGGCCAGCTGTCCAGAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | GGAGAATTGGCCCAGGCTCTCACAAGCCGCAGCACTTaGAAGAATGGGCCCCAGCTGACCAGCTCAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: GELAQALTSRST*KNGPQLTSSAT Trigger: GGTAGCTGAGCTGGTCAGCTGGGGCCCATTCTTCCAAGTGCTGCGGCTTGTGAGAGCCTGGGCCAATTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | CTGGACAGCTGGCCCTGCCACTTGTCTGTTATGAGGTaGTGTGGATGGGACACCCTCCCCCGTTGCCACCTT | + |
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Preference number: 3 (lower is better) Translates to: LDSWPCHLSVMR*CGWDTLPRCHL Trigger: AAGGTGGCAACGGGGGAGGGTGTCCCATCCACACCACCTCATAACAGACAAGTGGCAGGGCCAGCTGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | CAGCTGGCCCTGCCACTTGTCTGTTATGAGGTGGTGTaGATGGGACACCCTCCCCCGTTGCCACCTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: QLALPLVCYEVV*MGHPPPLPPSV Trigger: TACAGAAGGTGGCAACGGGGGAGGGTGTCCCATCCACACCACCTCATAACAGACAAGTGGCAGGGCCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CAA 90 bp | GAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTGGGACACCCTCCCCCGTaGCCACCTTCTGTAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: EVACYKWASLPSGPCLSLGHPPP*PPSVGR Trigger: TCTCCCTACAGAAGGTGGCAACGGGGGAGGGTGTCC...CAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | TGGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTGTaGATCCACAGTGGTGGGTCAGTGTCCATGGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: WASLPSGPCLSL*IHSGGSVSMAH Trigger: ATGAGCCATGGACACTGACCCACCACTGTGGATCCACAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | GGGGATCGTGAAAGGGCCACCCTGCTGTTCCAAAGCTaGAGGATCTCTATGACACAGCGCAGCAACAGGATA | + |
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Preference number: 3 (lower is better) Translates to: GDRERATLLFQS*RISMTQRSNRI Trigger: TATCCTGTTGCTGCGCTGTGTCATAGAGATCCTGCAGCTTTGGAACAGCAGGGTGGCCCTTTCACGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | CAGTGTCCATGGCTCATTATTACCACTAGGGAACACTaGGTGTCTGAGGCTGTGCAGGTCTGCCACCATCCC | + |
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Preference number: 3 (lower is better) Translates to: QCPWLIITTREH*VSEAVQVCHHP Trigger: GGGATGGTGGCAGACCTGCACAGCCTCAGACACCCAGTGTTCCCTAGTGGTAATAATGAGCCATGGACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CAA 90 bp | AGCAACCAGCAGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCCACAAGCCGCAGCACTaGGAAGAATGGGCCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SNQQRPLIGGIVLYQGQSHKPQH*EEWAPA Trigger: AGCTGGGGCCCATTCTTCCAAGTGCTGCGGCTTGTG...GCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCTGCTGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | ACTAGGGAACACTGGGTGTCTGAGGCTGTGCAGGTCTaGCACCATCCCTCATTGGATATAGCACTCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: TREHWVSEAVQV*HHPSLDIALWT Trigger: TGTCCAGAGTGCTATATCCAATGAGGGATGGTGGCAGACCTGCACAGCCTCAGACACCCAGTGTTCCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | CATGAGAAGAGGAACACAAGGTCTTGTAGACCTCCATaGCACCCACAGTCCTGCCCTCCAGTGCATAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: HEKRNTRSCRPP*HPQSCPPVHKH Trigger: ATGCTTATGCACTGGAGGGCAGGACTGTGGGTGGCATGGAGGTCTACAAGACCTTGTGTTCCTCTTCTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | GGAATTCAAGGGTGGAGAGAAGTAGCCTGTTATAAGTaGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: GIQGWREVACYK*ASLPSGPCLSL Trigger: CAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCACCCTTGAATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | ATGGCATGTTTTCTAGGCTTTGTTCTGTTGTTGGTGTaGTACTTTGGGGGAGGTCGCATGGGCAAAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: MACFLGFVLLLV*YFGGGRMGKGW Trigger: CCAACCTTTGCCCATGCGACCTCCCCCAAAGTAGCACACCAACAACAGAACAAAGCCTAGAAAACATGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR TCA 72 bp | CTCCAGTGCATAAGCATAGATACCTGCTTGTCACCATaGCAGACGGGAGAGAAAAAGGAATTCAAGGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: LQCISIDTCLSP*QTGEKKEFKGG Trigger: TCCACCCTTGAATTCCTTTTTCTCTCCCGTCTGTCATGGTGACAAGCAGGTATCTATGCTTATGCACTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CCA 72 bp | ATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATaGCAGTCCTTTGTTCATCCTAGCTTGATGGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: IGGIVLYQGQSR*QSFVHPSLMAK Trigger: TTTGGCCATCAAGCTAGGATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | TGGACAGAACCTTGTCAATTATCACTAACCACCAGTTaGTATACTCTTTGCCAGTGTGGGAAGACTGAGATA | + |
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Preference number: 3 (lower is better) Translates to: WTEPCQLSLTTS*YTLCQCGKTEI Trigger: TATCTCAGTCTTCCCACACTGGCAAAGAGTATAGCAACTGGTGGTTAGTGATAATTGACAAGGTTCTGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGATGGCCAAACCTTGTCTTATGCCTAGGACTCATAAAAATCAAATTAAACTAGGCTTTGTTCTGTaGTTGGTGTGCTACTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLMAKPCLMPRTHKNQIKLGFVL*LVCYFG Trigger: CCCAAAGTAGCACACCAACAACAGAACAAAGCCTAG...TTTAATTTGATTTTTATGAGTCCTAGGCATAAGACAAGGTTTGGCCATCAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR GCA 72 bp | TGTCAATTATCACTAACCACCAGTTGCTATACTCTTTaGCAGTGTGGGAAGACTGAGATACTAGGCATAAAT | + |
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Preference number: 3 (lower is better) Translates to: CQLSLTTSCYTL*QCGKTEILGIN Trigger: ATTTATGCCTAGTATCTCAGTCTTCCCACACTGGCAAAGAGTATAGCAACTGGTGGTTAGTGATAATTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | GGGAGAATTGGCCCAGGCTCTCACAAGCCGCAGCACTaGGAAGAATGGGCCCCAGCTGACCAGCTCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GRIGPGSHKPQH*EEWAPADQLSY Trigger: GTAGCTGAGCTGGTCAGCTGGGGCCCATTCTTCCAAGTGCTGCGGCTTGTGAGAGCCTGGGCCAATTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR TCA 90 bp | ACACAGCGCAGCAACAGGATAACTGGAGGGAGTCCTGATGAGGAGCCAACATTGCGGGAAAGATGGGGCTaGCCGAGAGTCACTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: TQRSNRITGGSPDEEPTLRERWG*PRVTPP Trigger: GGGTGGAGTGACTCTCGGTCAGCCCCATCTTTCCCG...CAATGTTGGCTCCTCATCAGGACTCCCTCCAGTTATCCTGTTGCTGCGCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | TGTTATGAGGTGGTGTGGATGGGACACCCTCCCCCGTaGCCACCTTCTGTAGGGAGAATTGGCCCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CYEVVWMGHPPP*PPSVGRIGPGS Trigger: AGAGCCTGGGCCAATTCTCCCTACAGAAGGTGGCAACGGGGGAGGGTGTCCCATCCACACCACCTCATAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | GTGTCTGAGGCTGTGCAGGTCTGCCACCATCCCTCATaGGATATAGCACTCTGGACAGCTGGCCCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VSEAVQVCHHPS*DIALWTAGPAT Trigger: AGTGGCAGGGCCAGCTGTCCAGAGTGCTATATCCAATGAGGGATGGTGGCAGACCTGCACAGCCTCAGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | ATTGGATATAGCACTCTGGACAGCTGGCCCTGCCACTaGTCTGTTATGAGGTGGTGTGGATGGGACACCCTC | + |
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Preference number: 4 (lower is better) Translates to: IGYSTLDSWPCH*SVMRWCGWDTL Trigger: GAGGGTGTCCCATCCACACCACCTCATAACAGACAAGTGGCAGGGCCAGCTGTCCAGAGTGCTATATCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | TGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTaGAGTCTGTGGATCCACAGTGGTGGGTCAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CYKWASLPSGPC*SLWIHSGGSVS Trigger: GGACACTGACCCACCACTGTGGATCCACAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | GCTTCCACGATGGCATGTTTTCTAGGCTTTGTTCTGTaGTTGGTGTGCTACTTTGGGGGAGGTCGCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: ASTMACFLGFVL*LVCYFGGGRMG Trigger: GCCCATGCGACCTCCCCCAAAGTAGCACACCAACAACAGAACAAAGCCTAGAAAACATGCCATCGTGGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | CAAGGGTGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTGAAACTCATCTGGTGTaGTGCTTCCACACGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: QGWREVACYKWASLPSGPETHLV*CFHTIC Trigger: ACAGATCGTGTGGAAGCAGCACACCAGATGAGTTTC...AGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCACCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR TCA 90 bp | CCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTTGTTCCAACTCCAATaGGACCACCCGGGGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PYWWYCSLSGAEQMAVLCLFQLQ*DHPGQH Trigger: ATGCTGCCCCGGGTGGTCTCATTGGAGTTGGAACAA...ACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | TGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGAATTGGTGCCCCTTCTaGTACGGTTCCTTGCACAAA | + |
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Preference number: 4 (lower is better) Translates to: WREVACYKWASLPSGPCLNWCPF*YGSLHK Trigger: TTTGTGCAAGGAACCGTAGCAGAAGGGGCACCAATT...CAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | ACTGGAGGGAGTCCTGATGAGGAGCCAACATTGTTGTaGTCACAGAAGCTACAGCTTCCACGATGGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: TGGSPDEEPTLL*SQKLQLPRWHV Trigger: AACATGCCATCGTGGAAGCTGTAGCTTCTGTGACAACAACAATGTTGGCTCCTCATCAGGACTCCCTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR TCA 90 bp | CAAGGGTGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTTTGTTGACATCAAATaGCCTGATGACAATGAGACG | + |
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Preference number: 4 (lower is better) Translates to: QGWREVACYKWASLPSGPFVDIK*PDDNET Trigger: CGTCTCATTGTCATCAGGTCATTTGATGTCAACAAA...AGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCACCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CCA 90 bp | CCTGCTTGTCACCATGACAGACGGGAGAGAAAAAGGAATTCAAGGGTGGAGAGACTCACTTCTATCTCCTaGCCTACCTTTAACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: PACHHDRRERKRNSRVERLTSIS*PTFNTP Trigger: AGGAGTGTTAAAGGTAGGCCAGGAGATAGAAGTGAG...TCTCTCCACCCTTGAATTCCTTTTTCTCTCCCGTCTGTCATGGTGACAAGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | TGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGACAAATGCGAGGATTTaGTCATATTGTTCCTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: WREVACYKWASLPSGPCLTNARI*SYCSLA Trigger: GGCTAAGGAACAATATGAGCAAATCCTCGCATTTGT...CAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | AGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCAAATCAGCCTTGACTaGACTAACTCTTCCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RDPLLVVLFFIRGRADGSQISLD*TNSSSC Trigger: ACAGGAGGAAGAGTTAGTGCAGTCAAGGCTGATTTG...ACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CCA 90 bp | CCTGCTTGTCACCATGACAGACGGGAGAGAAAAAGGAATTCAAGGGTGGAGAGACAGTTGAGCAGAAATTaGAATAATTGGTGCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PACHHDRRERKRNSRVERQLSRN*NNWCPF Trigger: GAAGGGGCACCAATTATTCCAATTTCTGCTCAACTG...TCTCTCCACCCTTGAATTCCTTTTTCTCTCCCGTCTGTCATGGTGACAAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCCAGCTTTTGGACCTTTaGTGCTTTCTTGTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVVLFFIRGRADGSPLFIQLLDL*CFLVSF Trigger: GAAGGAGACAAGAAAGCAGCAAAGGTCCAAAAGCTG...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CCA 90 bp | CCTGCTTGTCACCATGACAGACGGGAGAGAAAAAGGAATTCAAGGGTGGAGAGATTCTTAGACAGCTTTTaGACCTTTGCTGCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PACHHDRRERKRNSRVERFLDSF*TFAAFL Trigger: CAAGAAAGCAGCAAAGGTCCAAAAGCTGTCTAAGAA...TCTCTCCACCCTTGAATTCCTTTTTCTCTCCCGTCTGTCATGGTGACAAGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR GCA 90 bp | CCTGCTTGTCACCATGACAGACGGGAGAGAAAAAGGAATTCAAGGGTGGAGAGATCAACAAAGGAAACATaGCTGACTAACTTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: PACHHDRRERKRNSRVERSTKET*LTNLKF Trigger: GAACTTCAAGTTAGTCAGGCATGTTTCCTTTGTTGA...TCTCTCCACCCTTGAATTCCTTTTTCTCTCCCGTCTGTCATGGTGACAAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CCA 90 bp | TGGAGAGAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGTGGTCTAGGACAACTTaGGTCATCAAGTTTATAAAT | + |
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Preference number: 4 (lower is better) Translates to: WREVACYKWASLPSGPCLWSRTT*VIKFIN Trigger: ATTTATAAACTTGATGACCCAAGTTGTCCTAGACCA...CAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTCTCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR TCA 90 bp | AGCTTGATGGCCAAACCTTGTCTTATGCCTAGGACTCATAAAAATCAAATTAAAACTCCTCTTCTTATCTaGCCCCAACCAATTAAACGC | + |
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Preference number: 4 (lower is better) Translates to: SLMAKPCLMPRTHKNQIKTPLLI*PQPIKR Trigger: GCGTTTAATTGGTTGGGGTCAGATAAGAAGAGGAGT...TTTAATTTGATTTTTATGAGTCCTAGGCATAAGACAAGGTTTGGCCATCAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| 3UTR CAA 72 bp | TTCAAACTTCCCCAGCAATTCTTACGTCAGCCAGAGTaGGAAATCATTGCTGTGAAAGAGTATTTAATTAAG | + |
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Preference number: 4 (lower is better) Translates to: FKLPQQFLRQPE*EIIAVKEYLIK Trigger: CTTAATTAAATACTCTTTCACAGCAATGATTTCCAACTCTGGCTGACGTAAGAATTGCTGGGGAAGTTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CAA 90 bp | GAAGTAGCCTGTTATAAGTGGGCATCCCTGCCATCAGGGCCTTGTTTGAGTCTGACAGCTTTTGGACCTTaGCTGCTTTCTTGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: EVACYKWASLPSGPCLSLTAFGP*LLSCLL Trigger: AAGGAGACAAGAAAGCAGCAAAGGTCCAAAAGCTGT...CAGACTCAAACAAGGCCCTGATGGCAGGGATGCCCACTTATAACAGGCTACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CAA 90 bp | AGAGACCCCTTATTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTGAAAGTGGTGTCAACTaGGTAACATCCAATGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: RDPLLVVLFFIRGRADGSESGVN*VTSNVA Trigger: CGCCACATTGGATGTTACCAAGTTGACACCACTTTC...ACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAATAAGGGGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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| CDS-3UTR CAA 90 bp | TTGGTGGTATTGTTCTTTATCAGGGGCAGAGCAGATGGCAGTCCTTTGTTCATCGAGGATTTGCTCATATaGTTCCTTAGCCTGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: LVVLFFIRGRADGSPLFIEDLLI*FLSLTF Trigger: GAAAGTCAGGCTAAGGAACAATATGAGCAAATCCTC...GATGAACAAAGGACTGCCATCTGCTCTGCCCCTGATAAAGAACAATACCACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050328.15 |
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