Pregenerated sensors for EIF2S2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074656Ensembl transcript IDs: ENSMUST00000099173.11, ENSMUST00000166171.8
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTTGAGCCATTTAGCAAAGTTAACAGTCTGGTGGCAGAAAAGTTaGGCACCGTTTATGTCCTTATCCTGGTGGGTGCAAGTAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: FLSHLAKLTVWWQKS*APFMSLSWWVQVRQ Trigger: CTGCCTTACTTGCACCCACCAGGATAAGGACATAAACGGTGCTCAACTTTTCTGCCACCAGACTGTTAACTTTGCTAAATGGCTCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR TCA 90 bp | AGAAATTGCAGTCATAAACAGTTCTATTCACATGGCAGTGAGCGGTaGTGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: RNCSHKQFYSHGSER*WQVNQYISIYMAHL Trigger: GAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCATGTGAATAGAACTGTTTATGACTGCAATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CCA 90 bp | AGAAGGTTCCTTCTGCCATTTCACAGCCAAGTTACTTGGCTCATTTaGCCTATACTTGAAAATTCAGAGGTCACAGTGATTAAAAACAAC | + |
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Preference number: 1 (lower is better) Translates to: RRFLLPFHSQVTWLI*PILENSEVTVIKNN Trigger: GTTGTTTTTAATCACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTGGCTGTGAAATGGCAGAAGGAACCTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTTGACCTACCTGCTTGAGAGAAGGTTCCTTCTGCCATTTCACAGCCAATCAGCTGTTGTCACGTaGGAGAATGAGGAATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HLLTYLLERRFLLPFHSQSAVVT*ENEELA Trigger: AGCCAATTCCTCATTCTCTCACGTGACAACAGCTGA...TTGGCTGTGAAATGGCAGAAGGAACCTTCTCTCAAGCAGGTAGGTCAAGAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | TACCTGCTTGAGAGAAGGTTCCTTCTGCCATTTCACAGCCAAGTTACTTGGCTCAGGACGAAGTTTTACTaGCCTAGAGCACAGGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: YLLERRFLLPFHSQVTWLRTKFY*PRAQVG Trigger: TCCAACCTGTGCTCTAGGTCAGTAAAACTTCGTCCT...GAGCCAAGTAACTTGGCTGTGAAATGGCAGAAGGAACCTTCTCTCAAGCAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCGAGGAATCTAGCACCTaGCACTTTCAGCTGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: MAVSGDGRSTSISVYIWPEESST*HFQLLS Trigger: TGACAACAGCTGAAAGTGCCAGGTGCTAGATTCCTC...GGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTTGGTGGCAGAAAAGTTaGGCACCGTTTATGTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: VSGDGRSTSISVYIWPISWWQKS*APFMSL Trigger: TAAGGACATAAACGGTGCTCAACTTTTCTGCCACCA...AGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | TACCTGCTTGAGAGAAGGTTCCTTCTGCCATTTCACAGCCAAGTTACTTGGCTCGAGAGAATGAGGAATTaGCTAGGAAGAAGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: YLLERRFLLPFHSQVTWLERMRN*LGRSSS Trigger: ACTGCTACTTCTTCCTAGCCAATTCCTCATTCTCTC...GAGCCAAGTAACTTGGCTGTGAAATGGCAGAAGGAACCTTCTCTCAAGCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCGAGAGAATGAGGAATTaGCTAGGAAGAAGTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: MAVSGDGRSTSISVYIWPERMRN*LGRSSS Trigger: ACTGCTACTTCTTCCTAGCCAATTCCTCATTCTCTC...GGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCCATTTGGCCTATACTTaGAAATTCAGAGGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: MAVSGDGRSTSISVYIWPHLAYT*KFRGHS Trigger: ACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATG...GGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCGAAGTCTGTACTATATaGTTCCTCAAAGAGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: MAVSGDGRSTSISVYIWPEVCTI*FLKEDQ Trigger: TTGGTCCTCTTTGAGGAAGCATATAGTACAGACTTC...GGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | TACCTGCTTGAGAGAAGGTTCCTTCTGCCATTTCACAGCCAAGTTACTTGGCTCTGTAGAAAAGAAAACTaGAGGACAGATCGACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: YLLERRFLLPFHSQVTWLCRKEN*RTDRLQ Trigger: TTGAAGTCGATCTGTCCTTCAGTTTTCTTTTCTACA...GAGCCAAGTAACTTGGCTGTGAAATGGCAGAAGGAACCTTCTCTCAAGCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAGTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCAATAAAGACCACACATaGAGCAGTATCTCTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: MAVSGDGRSTSISVYIWPNKDHT*SSISWF Trigger: AAACCAAGAGATACTGCTTCATGTGTGGTCTTTATT...GGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTACAGAAAAGCATTTCAGAGGACGAAGTTTTACTGACCTAGAGCACAGGAAAAGGAAAAATGGCTaGCCAGCTCCAGTATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FSTEKHFRGRSFTDLEHRKRKNG*PAPVSA Trigger: GGCAGATACTGGAGCTGGGCAGCCATTTTTCCTTTT...CCTGTGCTCTAGGTCAGTAAAACTTCGTCCTCTGAAATGCTTTTCTGTACTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTACAGAAAAGCATTTCAGAGGACGAAGTTTTACTGACCTAGAGCACAGGAGTATCTGCCAGTTTTaGGGACAAAGAAAACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FSTEKHFRGRSFTDLEHRSICQF*GQRKLA Trigger: GGCAAGTTTTCTTTGTCCTCAAAACTGGCAGATACT...CCTGTGCTCTAGGTCAGTAAAACTTCGTCCTCTGAAATGCTTTTCTGTACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTTGACCTACCTGAAGTCTGTACTATATaGTTCCTCAAAGAGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: MAGQPVYQYIYGPSLDLPEVCTI*FLKEDQ Trigger: TTGGTCCTCTTTGAGGAAGCATATAGTACAGACTTC...AGGTAGGTCAAGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTGTTACTTGGCTCATTTaGCCTATACTTGAAAATTCA | + |
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Preference number: 2 (lower is better) Translates to: VSGDGRSTSISVYIWPISVTWLI*PILENS Trigger: TGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAAC...AGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCTAAGTGCTAAGAAGTCTGTACTATATGCTTCCTCAAAGAGGACCAACTGTAGAAAAGAAAACTaGAGGACAGATCGACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SFLSAKKSVLYASSKRTNCRKEN*RTDRLQ Trigger: TTGAAGTCGATCTGTCCTTCAGTTTTCTTTTCTACA...GTTGGTCCTCTTTGAGGAAGCATATAGTACAGACTTCTTAGCACTTAGGAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTACTTGGCTCATTTGGCCTATACTTGAAAATTCAGAGGTCACAGTGATTACTTGCCAAACAACTTaGCAGTTTTTCTATCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QVTWLIWPILENSEVTVITCQTT*QFFYLV Trigger: AACAAGATAGAAAAACTGCCAAGTTGTTTGGCAAGT...AATCACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACAAAAGGAAATTAAACACTTGCCAAACAACTTaGCAGTTTTTCTATCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: MRNWLGRSSSNPHKRKLNTCQTT*QFFYLV Trigger: AACAAGATAGAAAAACTGCCAAGTTGTTTGGCAAGT...GTTTAATTTCCTTTTGTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTCCAGTATCTGCCAGTTTTGAGGACAAAGAAAACTTGCCACAGCCCAGGTTTCAGAACAATCACTaGCCAAACAACTTGGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: PAPVSASFEDKENLPQPRFQNNH*PNNLAV Trigger: AACTGCCAAGTTGTTTGGCAAGTGATTGTTCTGAAA...CCTGGGCTGTGGCAAGTTTTCTTTGTCCTCAAAACTGGCAGATACTGGAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTGAGGACAAAGAAAACTaGCCACAGCCCAGGAATCAA | + |
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Preference number: 3 (lower is better) Translates to: VSGDGRSTSISVYIWPISEDKEN*PQPRNQ Trigger: TTGATTCCTGGGCTGTGGCAAGTTTTCTTTGTCCTC...AGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTCTGGTGGCAGAAAAGTaGAGCACCGTTTATGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: VSGDGRSTSISVYIWPISLVAEK*STVYVL Trigger: AAGGACATAAACGGTGCTCAACTTTTCTGCCACCAG...AGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR TCA 72 bp | AGATTGACCCTCCTGTGGCCCAATAAAGACCACACATaGAGCAGTATCTCTTGGTTTCTAGGTCACGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: RLTLLWPNKDHT*SSISWFLGHVQ Trigger: TTGAACGTGACCTAGAAACCAAGAGATACTGCTTCATGTGTGGTCTTTATTGGGCCACAGGAGGGTCAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTCACGTGAGAGAATGAGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACCAGTATCTGCCAGTTTaGAGGACAAAGAAAACTTGC | + |
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Preference number: 3 (lower is better) Translates to: LSRERMRNWLGRSSSNPHQYLPV*RTKKTC Trigger: GCAAGTTTTCTTTGTCCTCAAAACTGGCAGATACTG...GTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCTCATTCTCTCACGTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCGGTGATGGCAGGTCAACCAGTATATCAGTATATATATGGCCCATCTCTTCATTTGGCCTATACTaGAAAATTCAGAGGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: VSGDGRSTSISVYIWPISSFGLY*KIQRSQ Trigger: CTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGA...AGAGATGGGCCATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR TCA 72 bp | TCAACCAGTATATCAGTATATATATGGCCCATCTCTTaGCCTACCTGCTTGAGAGAAGGTTCCTTCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: STSISVYIWPIS*PTCLREGSFCH Trigger: ATGGCAGAAGGAACCTTCTCTCAAGCAGGTAGGTCAAGAGATGGGCCATATATATACTGATATACTGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CCA 72 bp | AGAAGGTTCCTTCTGCCATTTCACAGCCAAGTTACTTaGCTCATTTGGCCTATACTTGAAAATTCAGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RRFLLPFHSQVT*LIWPILENSEV Trigger: GACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTGGCTGTGAAATGGCAGAAGGAACCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CCA 72 bp | CTTCTGCCATTTCACAGCCAAGTTACTTGGCTCATTTaGCCTATACTTGAAAATTCAGAGGTCACAGTGATT | + |
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Preference number: 3 (lower is better) Translates to: LLPFHSQVTWLI*PILENSEVTVI Trigger: AATCACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTGGCTGTGAAATGGCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCCTAAGTGCTAAGAAGTCTGTACTATATGCTTCCTCAAAGAGGACCAACCACTTGCCAAACAACTaGGCAGTTTTTCTATCTTGT | + |
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Preference number: 3 (lower is better) Translates to: SFLSAKKSVLYASSKRTNHLPNN*AVFLSC Trigger: ACAAGATAGAAAAACTGCCAAGTTGTTTGGCAAGTG...GTTGGTCCTCTTTGAGGAAGCATATAGTACAGACTTCTTAGCACTTAGGAAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR TCA 72 bp | AGTCATAAACAGTTCTATTCACATGGCAGTGAGCGGTaGTGGCAGGTCAACCAGTATATCAGTATATATATG | + |
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Preference number: 3 (lower is better) Translates to: SHKQFYSHGSER*WQVNQYISIYM Trigger: CATATATATACTGATATACTGGTTGACCTGCCATCACCGCTCACTGCCATGTGAATAGAACTGTTTATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACAAAAGGAAATTAAACCCTCACTTGCCAAACAACTaGGCAGTTTTTCTATCTTGT | + |
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Preference number: 3 (lower is better) Translates to: RNWLGRSSSNPHKRKLNPHLPNN*AVFLSC Trigger: ACAAGATAGAAAAACTGCCAAGTTGTTTGGCAAGTG...AGGGTTTAATTTCCTTTTGTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTTACTTGGCTCATTTGGCCTATACTTGAAAATTCAGAGGTCACAGTGATTTTTCAGAACAATCACTaGCCAAACAACTTGGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: QVTWLIWPILENSEVTVIFQNNH*PNNLAV Trigger: AACTGCCAAGTTGTTTGGCAAGTGATTGTTCTGAAA...AATCACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CAA 72 bp | AAGGAGGAGGAATCTAGCACCTGGCACTTTCAGCTGTaGTCACGTGAGAGAATGAGGAATTGGCTAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KEEESSTWHFQL*SRERMRNWLGR Trigger: TCTTCCTAGCCAATTCCTCATTCTCTCACGTGACAACAGCTGAAAGTGCCAGGTGCTAGATTCCTCCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CCA 90 bp | CTTTATTCACGCAGTTATAGCCAACATTGGGGATCATGGGCAGAGGTACAAAAATTTGTCTCTGAGGGCTaGGTTTCTTCTGTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LYSRSYSQHWGSWAEVQKFVSEG*VSSVWA Trigger: TGCCCAGACAGAAGAAACCCAGCCCTCAGAGACAAA...TTTTTGTACCTCTGCCCATGATCCCCAATGTTGGCTATAACTGCGTGAATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CCA 90 bp | AGCTTCCTAAGTGCTAAGAAGTCTGTACTATATGCTTCCTCAAAGAGGACCAACTTTGTCTCTGAGGGCTaGGTTTCTTCTGTCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFLSAKKSVLYASSKRTNFVSEG*VSSVWA Trigger: TGCCCAGACAGAAGAAACCCAGCCCTCAGAGACAAA...GTTGGTCCTCTTTGAGGAAGCATATAGTACAGACTTCTTAGCACTTAGGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CAA 72 bp | CCATTTAGCAAAGTTAACAGTCTGGTGGCAGAAAAGTaGAGCACCGTTTATGTCCTTATCCTGGTGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PFSKVNSLVAEK*STVYVLILVGA Trigger: TGCACCCACCAGGATAAGGACATAAACGGTGCTCAACTTTTCTGCCACCAGACTGTTAACTTTGCTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR TCA 90 bp | AGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACAAAAGGAAATTAAACCCTGGCTCGGCTGGCTCTTaGGCATCACTCTCAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: RNWLGRSSSNPHKRKLNPGSAGS*ASLSIL Trigger: TAAGATTGAGAGTGATGCTCAAGAGCCAGCCGAGCC...AGGGTTTAATTTCCTTTTGTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| 3UTR CAA 72 bp | GTCAACCAGTATATCAGTATATATATGGCCCATCTCTaGACCTACCTGCTTGAGAGAAGGTTCCTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VNQYISIYMAHL*TYLLERRFLLP Trigger: TGGCAGAAGGAACCTTCTCTCAAGCAGGTAGGTCAAGAGATGGGCCATATATATACTGATATACTGGTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACAAAAGGAAATTAAACGGCTCGGCTGGCTCTTaGGCATCACTCTCAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: MRNWLGRSSSNPHKRKLNGSAGS*ASLSIL Trigger: TAAGATTGAGAGTGATGCTCAAGAGCCAGCCGAGCC...GTTTAATTTCCTTTTGTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCAACCACTCTTTCAAGGGAAGACCTATCTATTCTAGCCATGTAGCTTCATGGGTTTCTTCTGTCTaGGCATCACCTTCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: CSNHSFKGRPIYSSHVASWVSSV*ASPSSS Trigger: AGATGAAGAAGGTGATGCCCAGACAGAAGAAACCCA...TGAAGCTACATGGCTAGAATAGATAGGTCTTCCCTTGAAAGAGTGGTTGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099173.11 |
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| CDS-3UTR TCA 90 bp | AAAGAAATTGCAGTCATAAACAGTTCTATTCACATGGCAGTGAGCGGTGATGGCACAGAGCATCGAGAATaGCAAGTTTCACATTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: KEIAVINSSIHMAVSGDGTEHRE*QVSHCK Trigger: CTTACAATGTGAAACTTGTCATTCTCGATGCTCTGT...GCCATCACCGCTCACTGCCATGTGAATAGAACTGTTTATGACTGCAATTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACAAAAGGAAATTAAACTGGGTTTCTTCTGTCTaGGCATCACCTTCTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: MRNWLGRSSSNPHKRKLNWVSSV*ASPSSS Trigger: AGATGAAGAAGGTGATGCCCAGACAGAAGAAACCCA...GTTTAATTTCCTTTTGTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR TCA 90 bp | CAAGTTACTTGGCTCATTTGGCCTATACTTGAAAATTCAGAGGTCACAGTGATTACAGAGCATCGAGAATaGCAAGTTTCACATTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: QVTWLIWPILENSEVTVITEHRE*QVSHCK Trigger: CTTACAATGTGAAACTTGTCATTCTCGATGCTCTGT...AATCACTGTGACCTCTGAATTTTCAAGTATAGGCCAAATGAGCCAAGTAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CAA 90 bp | TTGTCACGTGAGAGAATGAGGAATTGGCTAGGAAGAAGTAGCAGTAATCCTCACTTTTCTCTCATGATGTaGAACACTCGGTTCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LSRERMRNWLGRSSSNPHFSLMM*NTRFSN Trigger: GTTGCTGAACCGAGTGTTCAACATCATGAGAGAAAA...GTGAGGATTACTGCTACTTCTTCCTAGCCAATTCCTCATTCTCTCACGTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTACAGAAAAGCATTTCAGAGGACGAAGTTTTACTGACCTAGAGCACAGGTTTTCTCTCATGATGTaGAACACTCGGTTCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: FSTEKHFRGRSFTDLEHRFSLMM*NTRFSN Trigger: GTTGCTGAACCGAGTGTTCAACATCATGAGAGAAAA...CCTGTGCTCTAGGTCAGTAAAACTTCGTCCTCTGAAATGCTTTTCTGTACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099173.11 ENSMUST00000166171.8 |
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