Pregenerated sensors for EIF2S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021116Ensembl transcript IDs: ENSMUST00000071230.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAATTAGGTAGCACCTACCAGATAGAGGAAACTGTCCCCTTCAGATaGGTGATGCTGCTCAAAATAACTCCATCAAAGCAGCAGCACATT | + |
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Preference number: 1 (lower is better) Translates to: ELGSTYQIEETVPFR*VMLLKITPSKQQHI Trigger: AATGTGCTGCTGCTTTGATGGAGTTATTTTGAGCAGCATCACCCATCTGAAGGGGACAGTTTCCTCTATCTGGTAGGTGCTACCTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR TCA 90 bp | AGGCATGCACTACCATACCTGGCCCTAAACTTGCTTCTTGATGCATaGCCAGTGGTTGTTCTAGACCATCAAAAACCAGATATTTATATT | + |
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Preference number: 1 (lower is better) Translates to: RHALPYLALNLLLDA*PVVVLDHQKPDIYI Trigger: AATATAAATATCTGGTTTTTGATGGTCTAGAACAACCACTGGTCATGCATCAAGAAGCAAGTTTAGGGCCAGGTATGGTAGTGCATGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CCA 90 bp | TCTCTACCAGGGGTCAAATTCCTAATTTCTTCTCTAACATTCCTTTaGAGAGTCTGTTCCTGCATAAGTCATTTAGTTACTTGCCCATTG | + |
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Preference number: 1 (lower is better) Translates to: SLPGVKFLISSLTFL*RVCSCISHLVTCPL Trigger: CAATGGGCAAGTAACTAAATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAATTTGACCCCTGGTAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCACTGTCCCCTTCAGATaGGTGATGCTGCTCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: STGPSIRKVENHCCSQPITVPFR*VMLLKI Trigger: TATTTTGAGCAGCATCACCCATCTGAAGGGGACAGT...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR TCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCATTGGCTTTAACTTGTaGCAAGAAGGAAGAAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: STGPSIRKVENHCCSQPIIGFNL*QEGRSL Trigger: TAGGCTTCTTCCTTCTTGTCACAAGTTAAAGCCAAT...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CAA 90 bp | TTCAGCTTTGAAGTTTTCAATACTGGAAAACTCTCAAGTCTAGGGTaGACAGCCAGGAAGGGCTGCTTCGTACTCCTTAAATTGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: FSFEVFNTGKLSSLG*TARKGCFVLLKLDC Trigger: ACAGTCCAATTTAAGGAGTACGAAGCAGCCCTTCCTGGCTGTCAACCCTAGACTTGAGAGTTTTCCAGTATTGAAAACTTCAAAGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGTGGAAACAGCTGACATaGAGGAGGGCATTTAGATTC | + |
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Preference number: 2 (lower is better) Translates to: THTHIHTTQELGSTYQIEWKQLT*RRAFRF Trigger: GAATCTAAATGCCCTCCTTCATGTCAGCTGTTTCCA...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGTATATATAGACCAGCTATGCCTTGAACTCAGAGATCCAACTGCCACTGTCGCATGCCAAACTAAATaGAGACTTTCTACATGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LVYIDQLCLELRDPTATVACQTK*RLSTCD Trigger: ATCACATGTAGAAAGTCTTCATTTAGTTTGGCATGC...GACAGTGGCAGTTGGATCTCTGAGTTCAAGGCATAGCTGGTCTATATATACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTAATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTGCATAAGTCATCTATGTGGAAACAGCTaGCATGAAGGAGGGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: FLISSLTFLWRVCSCISHLCGNS*HEGGHL Trigger: TAAATGCCCTCCTTCATGTCAGCTGTTTCCACATAG...ATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR TCA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCATCAAGCCACTCCCTTaGAAAATGCTTGAGGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: VYIHTHTHIHTTQELGSTIKPLP*KMLEVL Trigger: TAACACCTCAAGCATTTTTCAAGGGAGTGGCTTGAT...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGTGGAGAGTCTGTTCCTaGATAAGTCATTTAGTTACT | + |
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Preference number: 2 (lower is better) Translates to: THTHIHTTQELGSTYQIEWRVCS*ISHLVT Trigger: AGTAACTAAATGACTTATGCAGGAACAGACTCTCCA...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CAA 90 bp | TTCTCTACCAGGGGTCAAATTCCTAATTTCTTCTCTAACATTCCTTaGGAGAGTCTGTTCCTGCATAAGTCATTTAGTTACTTGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: FSTRGQIPNFFSNIP*ESLFLHKSFSYLPI Trigger: AATGGGCAAGTAACTAAATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAATTTGACCCCTGGTAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTAATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTGCATAAGTCATTTTAAGATTTGTCTCTaGTCAAATCAAGCCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: FLISSLTFLWRVCSCISHFKICL*SNQATP Trigger: GGGAGTGGCTTGATTTGACCAGAGACAAATCTTAAA...ATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CAA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCCTCTCAAGTCTAGGGTaGACAGCCAGGAAGGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: STGPSIRKVENHCCSQPILSSLG*TARKGC Trigger: GCAGCCCTTCCTGGCTGTCAACCCTAGACTTGAGAG...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR TCA 72 bp | CCTTTTGATACAGAGTCTTGCAGTGGTTGTCCAGGCTaGTCAGCAACTCTTGGCTCAAGGAATTTTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PFDTESCSGCPG*SATLGSRNFPS Trigger: GGAGGGAAAATTCCTTGAGCCAAGAGTTGCTGATCAGCCTGGACAACCACTGCAAGACTCTGTATCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CAA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCTTCTCTAACATTCCTTaGGAGAGTCTGTTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: STGPSIRKVENHCCSQPIFSNIP*ESLFLH Trigger: ATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAA...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGGCTGATCAGCAACTCTTGGCTCAAGGAATTTTCCCTCCTCAACTTTCCAAAGATTGGGATTGTTaGTGTTTGGAGTCCCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: VQADQQLLAQGIFPPQLSKDWDC*CLESLV Trigger: TACCAGGGACTCCAAACACAAACAATCCCAATCTTT...GGAAAGTTGAGGAGGGAAAATTCCTTGAGCCAAGAGTTGCTGATCAGCCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR-3UTR CAA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCATAGAAAGATTGGGATaGTTTGTGTTTGGAGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: STGPSIRKVENHCCSQPIIERLG*FVFGVP Trigger: AGGGACTCCAAACACAAACAATCCCAATCTTTCTAT...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR TCA 72 bp | ATGCTTGAGGTGTTAGAGCCACTATGTGGAAACAGCTaGCATGAAGGAGGGCATTTAGATTCTGGCTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: MLEVLEPLCGNS*HEGGHLDSGLL Trigger: CAACAAGCCAGAATCTAAATGCCCTCCTTCATGTCAGCTGTTTCCACATAGTGGCTCTAACACCTCAAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR GCA 72 bp | AAACTCTCAAGTCTAGGGTTGACAGCCAGGAAGGGCTaGTTCGTACTCCTTAAATTGGACTGTTTGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: KLSSLGLTARKG*FVLLKLDCLPK Trigger: TTTTGGCAAACAGTCCAATTTAAGGAGTACGAAGCAGCCCTTCCTGGCTGTCAACCCTAGACTTGAGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR TCA 72 bp | TGGGATTGTTTGTGTTTGGAGTCCCTGGTAAATCTCTaGACCATAAGGGTGCCATTCCAGAGACATGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: WDCLCLESLVNL*TIRVPFQRHEK Trigger: TTTCTCATGTCTCTGGAATGGCACCCTTATGGTTCAGAGATTTACCAGGGACTCCAAACACAAACAATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR GCA 72 bp | ATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTaGATAAGTCATTTAGTTACTTGCCCATTGAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: ISSLTFLWRVCS*ISHLVTCPLSS Trigger: AGAACTCAATGGGCAAGTAACTAAATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCCCGTTCCAGCTGCCTTaGAAGTTCAGTCTCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: STGPSIRKVENHCCSQPIPFQLP*KFSLIC Trigger: ACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGG...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR TCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCTCTCATCTGTATCTGTaGCCACTTTGGGCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: STGPSIRKVENHCCSQPISHLYL*PLWAPS Trigger: AGATGGAGCCCAAAGTGGTCACAGATACAGATGAGA...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCCCAGCTGCTCATCCTTaGTATATTCTAATACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: STGPSIRKVENHCCSQPIPAAHP*YILIPQ Trigger: CTGAGGTATTAGAATATACCAAGGATGAGCAGCTGG...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | TCGACAGGTCCCAGCATTAGGAAGGTTGAGAACCACTGCTGTAGTCAGCCAATCCTTTTACAGCATCAATaGCTTCATAACCATAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: STGPSIRKVENHCCSQPILLQHQ*LHNHSK Trigger: CTTGCTATGGTTATGAAGGCATTGATGCTGTAAAAG...GATTGGCTGACTACAGCAGTGGTTCTCAACCTTCCTAATGCTGGGACCTGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CAA 72 bp | ACAGGGTTTCTCTGTGTAACAGCGCTGGAACTTGCTTaGAAAACTAGGCTAGCCTCCCAAGTACTGGAATTA | + |
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Preference number: 4 (lower is better) Translates to: TGFLCVTALELA*KTRLASQVLEL Trigger: TAATTCCAGTACTTGGGAGGCTAGCCTAGTTTTCAAAGCAAGTTCCAGCGCTGTTACACAGAGAAACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR TCA 90 bp | TTGGTATATATAGACCAGCTATGCCTTGAACTCAGAGATCCAACTGCCACTGTCTATATTCCAACAAGCTaGCATAGGCCCCCATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LVYIDQLCLELRDPTATVYIPTS*HRPPFQ Trigger: CTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATA...GACAGTGGCAGTTGGATCTCTGAGTTCAAGGCATAGCTGGTCTATATATACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | TTGGTATATATAGACCAGCTATGCCTTGAACTCAGAGATCCAACTGCCACTGTCAACAGGCTCTCCAGCTaGTCATCCTTGGTATATTCT | + |
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Preference number: 4 (lower is better) Translates to: LVYIDQLCLELRDPTATVNRLSS*SSLVYS Trigger: AGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTT...GACAGTGGCAGTTGGATCTCTGAGTTCAAGGCATAGCTGGTCTATATATACCAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CAA 72 bp | GAAGTTTTCAATACTGGAAAACTCTCAAGTCTAGGGTaGACAGCCAGGAAGGGCTGCTTCGTACTCCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: EVFNTGKLSSLG*TARKGCFVLLK Trigger: TTTAAGGAGTACGAAGCAGCCCTTCCTGGCTGTCAACCCTAGACTTGAGAGTTTTCCAGTATTGAAAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR TCA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTATCTGCTCGAATTTTaGCCGCTTGTGGGGTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: VYIHTHTHIHTTQELGSTYLLEF*PLVGSN Trigger: GTTTGACCCCACAAGCGGTCAAAATTCGAGCAGATA...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGCTTCTCTTTGATAACTaGCATAGCCTGATTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: THTHIHTTQELGSTYQIELLFDN*HSLIED Trigger: GTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAG...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CCA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGCCCCCATTTCAGCAATaGATCTTACATTCACCATCA | + |
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Preference number: 4 (lower is better) Translates to: THTHIHTTQELGSTYQIEPPFQQ*ILHSPS Trigger: TGATGGTGAATGTAAGATCCATTGCTGAAATGGGGG...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCGTCCTCACATTTGATTaGTTCCTCTGGAGAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: VYIHTHTHIHTTQELGSTVLTFD*FLWRNS Trigger: AGAGTTTCTCCAGAGGAAGCAATCAAATGTGAGGAC...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | TTCCTAATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTGCATAAGTCATAGAACAATTCAAACCTaGCCTCAGGGCTTCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: FLISSLTFLWRVCSCISHRTIQT*PQGFFY Trigger: GTAAAAGAAGCCCTGAGGGCAGGTTTGAATTGTTCT...ATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| 3UTR CAA 72 bp | AGGGGTCAAATTCCTAATTTCTTCTCTAACATTCCTTaGGAGAGTCTGTTCCTGCATAAGTCATTTAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: RGQIPNFFSNIP*ESLFLHKSFSY Trigger: GTAACTAAATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAATTTGACCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR GCA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCCAACATGGCGAAGAATaGTATAAACAGTTTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: VYIHTHTHIHTTQELGSTQHGEE*YKQFWI Trigger: AATCCAAAACTGTTTATAGCATTCTTCGCCATGTTG...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS TCA 90 bp | ACGCCCCTCTTCTCCTCGATCTTCTCTTTGATAACTGCCATAGCCTaGTTGAGGACAGACAGGCCTTCTGTCCTCTCCAGGGTCGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: TPLFSSIFSLITAIA*LRTDRPSVLSRVVV Trigger: AACAACGACCCTGGAGAGGACAGAAGGCCTGTCTGTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAGATCGAGGAGAAGAGGGGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS GCA 90 bp | TTGTCATCGAAGACCCAGGCAGTCCTCTGGAACAGGCTCTCCAGCTaGTCATCCTTGGTATATTCTAATACCTCAGCAACATGGCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LSSKTQAVLWNRLSS*SSLVYSNTSATWRR Trigger: TCTTCGCCATGTTGCTGAGGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGACTGCCTGGGTCTTCGATGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS GCA 90 bp | AACATTGAAGACGCCCCTCTTCTCCTCGATCTTCTCTTTGATAACTaGCATAGCCTGATTGAGGACAGACAGGCCTTCTGTCCTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: NIEDAPLLLDLLFDN*HSLIEDRQAFCPLQ Trigger: CTGGAGAGGACAGAAGGCCTGTCTGTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAGATCGAGGAGAAGAGGGGCGTCTTCAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CCA 90 bp | TATCCAGGTCTCTTGTACTTGTCATCGAAGACCCAGGCAGTCCTCTaGAACAGGCTCTCCAGCTGCTCATCCTTGGTATATTCTAATACC | + |
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Preference number: 5 (lower is better) Translates to: YPGLLYLSSKTQAVL*NRLSSCSSLVYSNT Trigger: GGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGACTGCCTGGGTCTTCGATGACAAGTACAAGAGACCTGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGGCCGTTCCAGCTGCCTaGCAAGTTCAGTCTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: THTHIHTTQELGSTYQIEAVPAA*QVQSHL Trigger: CAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGC...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | GTCCAGGCTGATCAGCAACTCTTGGCTCAAGGAATTTTCCCTCCTCAACTTTCCGGGGTCAAACGCCTATaGATATTATTAATGAGTACT | + |
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Preference number: 5 (lower is better) Translates to: VQADQQLLAQGIFPPQLSGVKRL*ILLMST Trigger: AGTACTCATTAATAATATCAATAGGCGTTTGACCCC...GGAAAGTTGAGGAGGGAAAATTCCTTGAGCCAAGAGTTGCTGATCAGCCTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTACCAGATAGAGTCGAATTTTGACCGCTaGTGGGGTCAAACGCCTATT | + |
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Preference number: 5 (lower is better) Translates to: THTHIHTTQELGSTYQIESNFDR*WGQTPI Trigger: AATAGGCGTTTGACCCCACAAGCGGTCAAAATTCGA...CTCTATCTGGTAGGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCTCCTCTCCAGGGTCGTaGTTGTCATCACATACCTGG | + |
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Preference number: 5 (lower is better) Translates to: VYIHTHTHIHTTQELGSTSSPGS*LSSHTW Trigger: CCAGGTATGTGATGACAACAACGACCCTGGAGAGGA...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | TTCCTAATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTGCATAAGTCATCCAGGTCTCTTGTACTaGTCATCGAAGACCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FLISSLTFLWRVCSCISHPGLLY*SSKTQA Trigger: TGCCTGGGTCTTCGATGACAAGTACAAGAGACCTGG...ATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCCCGTATCCAGGTCTCTaGTACTTGTCATCGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: VYIHTHTHIHTTQELGSTPYPGL*YLSSKT Trigger: GGTCTTCGATGACAAGTACAAGAGACCTGGATACGG...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | TTCCTAATTTCTTCTCTAACATTCCTTTGGAGAGTCTGTTCCTGCATAAGTCATATATCTGCTCGAATTTaGACCGCTTGTGGGGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: FLISSLTFLWRVCSCISHISARI*TACGVK Trigger: TTTGACCCCACAAGCGGTCAAAATTCGAGCAGATAT...ATGACTTATGCAGGAACAGACTCTCCAAAGGAATGTTAGAGAAGAAATTAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CCA 90 bp | ACCATAGCAAGCTACTTCAATATCTGCTCGAATTTTGACCGCTTGTaGGGTCAAACGCCTATTGATATTATTAATGAGTACTTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TIASYFNICSNFDRL*GQTPIDIINEYFSF Trigger: GAAAGAGAAGTACTCATTAATAATATCAATAGGCGTTTGACCCCACAAGCGGTCAAAATTCGAGCAGATATTGAAGTAGCTTGCTATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCCCAATTCGGATCAGTTaGTTTATAGAACGGATACGT | + |
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Preference number: 5 (lower is better) Translates to: VYIHTHTHIHTTQELGSTPIRIS*FIERIR Trigger: ACGTATCCGTTCTATAAACAAACTGATCCGAATTGG...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS-3UTR CAA 90 bp | GTATATATACACACACACACACACATACACACAACTCAAGAATTAGGTAGCACCAATTTGTCCTCACATTaGATTGCTTCCTCTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: VYIHTHTHIHTTQELGSTNLSSH*IASSGE Trigger: TTCTCCAGAGGAAGCAATCAAATGTGAGGACAAATT...GGTGCTACCTAATTCTTGAGTTGTGTGTATGTGTGTGTGTGTGTGTATATATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS TCA 72 bp | TTCTCCTCGATCTTCTCTTTGATAACTGCCATAGCCTaGTTGAGGACAGACAGGCCTTCTGTCCTCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSIFSLITAIA*LRTDRPSVLSR Trigger: CCTGGAGAGGACAGAAGGCCTGTCTGTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAGATCGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS TCA 72 bp | GTCTCATCTGTATCTGTGACCACTTTGGGCTCCATCTaGACATTGAAGACGCCCCTCTTCTCCTCGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VSSVSVTTLGSI*TLKTPLFSSIF Trigger: GAAGATCGAGGAGAAGAGGGGCGTCTTCAATGTTCAGATGGAGCCCAAAGTGGTCACAGATACAGATGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS GCA 72 bp | AAGACCCAGGCAGTCCTCTGGAACAGGCTCTCCAGCTaGTCATCCTTGGTATATTCTAATACCTCAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: KTQAVLWNRLSS*SSLVYSNTSAT Trigger: TGTTGCTGAGGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGACTGCCTGGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CAA 72 bp | GCAGTCCTCTGGAACAGGCTCTCCAGCTGCTCATCCTaGGTATATTCTAATACCTCAGCAACATGGCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AVLWNRLSSCSS*VYSNTSATWRR Trigger: TCTTCGCCATGTTGCTGAGGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGACTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS GCA 72 bp | TTCTGCATTTTCTCTCTCCAGCCGTTCCAGCTGCCTTaGAAGTTCAGTCTCATCTGTATCTGTGACCACTTT | + |
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Preference number: 6 (lower is better) Translates to: FCIFSLQPFQLP*KFSLICICDHF Trigger: AAAGTGGTCACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGCTGGAGAGAGAAAATGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS GCA 72 bp | TCAAACCTGCCCTCAGGGCTTCTTTTACAGCATCAATaGCTTCATAACCATAGCAAGCTACTTCAATATCTG | + |
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Preference number: 6 (lower is better) Translates to: SNLPSGLLLQHQ*LHNHSKLLQYL Trigger: CAGATATTGAAGTAGCTTGCTATGGTTATGAAGGCATTGATGCTGTAAAAGAAGCCCTGAGGGCAGGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS TCA 72 bp | GAATCATGCCTTCAATGTTATTATATTCCAACAAGCTaGCATAGGCCCCCATTTCAGCAATGGATCTTACAT | + |
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Preference number: 6 (lower is better) Translates to: ESCLQCYYIPTS*HRPPFQQWILH Trigger: ATGTAAGATCCATTGCTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATAATAACATTGAAGGCATGATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CCA 72 bp | AGCTACTTCAATATCTGCTCGAATTTTGACCGCTTGTaGGGTCAAACGCCTATTGATATTATTAATGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: SYFNICSNFDRL*GQTPIDIINEY Trigger: GTACTCATTAATAATATCAATAGGCGTTTGACCCCACAAGCGGTCAAAATTCGAGCAGATATTGAAGTAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CAA 72 bp | GCTCGAATTTTGACCGCTTGTGGGGTCAAACGCCTATaGATATTATTAATGAGTACTTCTCTTTCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ARILTACGVKRL*ILLMSTSLSSS Trigger: TGAAGATGAAAGAGAAGTACTCATTAATAATATCAATAGGCGTTTGACCCCACAAGCGGTCAAAATTCGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CAA 72 bp | ACAACAACACATTCATTTCTGCCAATTCGGATCAGTTaGTTTATAGAACGGATACGTCGTCTGGATAATTCA | + |
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Preference number: 6 (lower is better) Translates to: TTTHSFLPIRIS*FIERIRRLDNS Trigger: TGAATTATCCAGACGACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTTGTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CAA 90 bp | ACTCTAATGACAACAACACATTCATTTCTGCCAATTCGGATCAGTTaGTTTATAGAACGGATACGTCGTCTGGATAATTCACTAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TLMTTTHSFLPIRIS*FIERIRRLDNSLRR Trigger: TCTTCTTAGTGAATTATCCAGACGACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTTGTTGTCATTAGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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| CDS CAA 90 bp | TCAATATCTGCTCGAATTTTGACCGCTTGTGGGGTCAAACGCCTATaGATATTATTAATGAGTACTTCTCTTTCATCTTCATTCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: SISARILTACGVKRL*ILLMSTSLSSSFKS Trigger: AGATTTGAATGAAGATGAAAGAGAAGTACTCATTAATAATATCAATAGGCGTTTGACCCCACAAGCGGTCAAAATTCGAGCAGATATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071230.8 |
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