Pregenerated sensors for EIF2B5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003235Ensembl transcript IDs: ENSMUST00000003320.14, ENSMUST00000148714.2, ENSMUST00000231315.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGACAAAGTACTTACTCTaGCCCACCCCCAACTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FPKGKLEHKVLTLAHPQLTKYLL*PTPNCR Trigger: CCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGT...CAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCAGGACGAGCAGCACATaGCTGCCAGCAGTAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGRTSST*LPAVGR Trigger: TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCT...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTAGGACGAGCAGCACATaGCTGCCAGCAGTAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: QLLFTVPQGKAGTQSTYSRTSST*LPAVGR Trigger: TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCT...AGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| 3UTR CCA 72 bp | TCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTaGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: SPRESWNTKYLL*PTPNCRVCLEF Trigger: GAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| 3UTR CCA 72 bp | GGACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTaGAACACAAAGTACTTACTCTGGCCCACCCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: GPAALYCSPRES*NTKYLLWPTPN Trigger: GTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGGCCACTAGAACTGCCTaGAGGGGCGGCGGCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GKLEHKVLTLAHPQLQGLATRTA*RGGGGS Trigger: GGAGCCGCCGCCGCCCCTCCAGGCAGTTCTAGTGGC...CAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | CTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGATCCTCCTCCGCACCTTaGGTTCCCCCGCCGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LILTSVRTSSTWLPAVGRSSSAP*VPPPPE Trigger: CTCGGGCGGCGGGGGAACCCAAGGTGCGGAGGAGGA...TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | TCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGATGCCATGGCCCAGGCTaGCTTCAGGCCCTCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SLILTSVRTSSTWLPAVGCHGPG*LQALGR Trigger: TCTACCGAGGGCCTGAAGTCAGCCTGGGCCATGGCA...TCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | TCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCCTGATGTCATCCAGCTaGGGGGAGCCTGCTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPRESWNTKYLLWPTPNCLMSSS*GEPARL Trigger: CAGCCGAGCAGGCTCCCCTCAGCTGGATGACATCAG...GCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGTCTAACTGGGTCTTCTGGAAGTaGAGAACCCTGTTGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LAHPQLQGLSRVPLTQSNWVFWK*RTLLVA Trigger: CGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCA...GTTAGACTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | CTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGTCTAACAGCAGTTGCTGCCGATaGCAGTGCCAGCTCCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LAHPQLQGLSRVPLTQSNSSCCR*QCQLPK Trigger: TTTTGGGAGCTGGCACTGTCATCGGCAGCAACTGCT...GTTAGACTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR GCA 90 bp | TCTGTCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCAGCTGAGGGGAGCCTaGTCGGCTGTCCAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SVSSLVTRTANEMHGSGSQLRGA*SAVQLL Trigger: GAGGAGCTGGACAGCCGAGCAGGCTCCCCTCAGCTG...ACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTATCCAGGACGCTGCCATaGCCCAGGCTGACTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SWNTKYLLWPTPNCRVCLSRTLP*PRLTSG Trigger: GCCTGAAGTCAGCCTGGGCCATGGCAGCGTCCTGGA...TAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | CTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGACAGGGCTCCAGGCTTTaGGCAGAGGAAGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LILTSVRTSSTWLPAVGRQGSRL*AEEAAR Trigger: CCTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTG...TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | AAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTACAGGGCTCCAGGCTTTaGGCAGAGGAAGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KVLTLAHPQLQGLSRVPLQGSRL*AEEAAR Trigger: CCTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTG...TAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | GGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTAGATGTTCTCCTCTCTaGCCCGCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GKAGTQSTYSGPPPTAGSRCSPL*PAAAFP Trigger: TGGGAACGCTGCAGCGGGGCAGAGAGGAGAACATCT...AGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAGATGTTCTCCTCTCTaGCCCGCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FPHPNFSQDEQHMAASSRRCSPL*PAAAFP Trigger: TGGGAACGCTGCAGCGGGGCAGAGAGGAGAACATCT...CCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGTCTAACTTTCCTGTACACCCGTaGCAGTCAGGAACTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LAHPQLQGLSRVPLTQSNFPVHP*QSGTPE Trigger: CTCTGGAGTTCCTGACTGCCACGGGTGTACAGGAAA...GTTAGACTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | TCTGTCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCGGCAGCGTGATGTCTaGGCCCACTACCACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SVSSLVTRTANEMHGSGSRQRDV*AHYHLG Trigger: TCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCG...ACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | GAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTAGACCCATCGGCGGATaGCGTCAGCACAAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESWNTKYLLWPTPNCRVCRPIGG*RQHKQL Trigger: CAGCTGTTTGTGCTGACGTCATCCGCCGATGGGTCT...ACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR GCA 90 bp | CTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACAGCTGAGGGGAGCCTaGTCGGCTGTCCAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LFTVPQGKAGTQSTYSGPQLRGA*SAVQLL Trigger: GAGGAGCTGGACAGCCGAGCAGGCTCCCCTCAGCTG...TGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | TCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCACCAGATGTTCTCCTCTCTaGCCCGCTGCAGCGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SALLLRGQPMRCTDLAVTRCSPL*PAAAFP Trigger: TGGGAACGCTGCAGCGGGGCAGAGAGGAGAACATCT...GGTGACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | CCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACAAGAGGACCCGAGGCTaGTCCTTGGAGATGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLTQSNFPHPNFSQDEQHKRTRG*SLEMGK Trigger: CTTCCCCATCTCCAAGGACCAGCCTCGGGTCCTCTT...GTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | CTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGACAATTAGCGCAACGTTaGCCAGGGGCAAGAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: LILTSVRTSSTWLPAVGRQLAQR*PGARGP Trigger: GGGTCCTCTTGCCCCTGGCCAACGTTGCGCTAATTG...TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | CCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACACCACGTTGTCCTCATaGCAGCGTGTAGGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLTQSNFPHPNFSQDEQHTTLSS*QRVGWL Trigger: CAGCCACCCTACACGCTGCCATGAGGACAACGTGGT...GTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | TCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGTTTACTTCTGGAGTaGGAGGGTAGACCCATCGGC | + |
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Preference number: 4 (lower is better) Translates to: SLILTSVRTSSTWLPAVGSLLLE*EGRPIG Trigger: GCCGATGGGTCTACCCTCTCACTCCAGAAGTAAACT...TCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | TCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCTGATGTCATCCAGCTaGGGGGAGCCTGCTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLLFPKGKLEHKVLTLAHLMSSS*GEPARL Trigger: CAGCCGAGCAGGCTCCCCTCAGCTGGATGACATCAG...GTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTCCACTCCGTCTCCACTaGCCTGGAACAGGCTCAATG | + |
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Preference number: 4 (lower is better) Translates to: PNFSQDEQHMAASSRKNTPLRLH*PGTGSM Trigger: CATTGAGCCTGTTCCAGGGCAGTGGAGACGGAGTGG...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | CCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACAGTGAAGAACCCTGTTaGTGGCGCTGTCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLTQSNFPHPNFSQDEQHSEEPC*WRCPQP Trigger: TGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACT...GTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | TCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCGGGCCCACTACCACCTaGGAAGTGAGAACACAGTAT | + |
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Preference number: 4 (lower is better) Translates to: SPRESWNTKYLLWPTPNCGPTTT*EVRTQY Trigger: ATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCC...GCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | TCTAGAGTTCCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACCGGCAGCGTGATGTCTaGGCCCACTACCACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SRVPLTQSNFPHPNFSQDRQRDV*AHYHLG Trigger: TCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCG...GTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGGAACTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | CTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTGGGAAGAAGCGGCGGTTaGAGCTATCGGCCACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LTSVRTSSTWLPAVGRILGRSGG*SYRPLE Trigger: TTCTAGTGGCCGATAGCTTCAACCGCCGCTTCTTCC...CAGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR TCA 90 bp | TCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCACCCTCTCAGCCACTGGATaGACCTCTGCAGCTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: SALLLRGQPMRCTDLAVTLSATG*TSAAVD Trigger: ATCAACAGCTGCAGAGGTTCATCCAGTGGCTGAGAG...GGTGACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | CTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGTTCCAAGTGGTCAGCTaGACGCTTTATGTAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTLAHPQLQGLSRVPLTQFQVVS*TLYVVP Trigger: AGGAACTACATAAAGCGTGCAGCTGACCACTTGGAA...CTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | TCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCGAAGTCCTCAATGGCTaGCAATGCTTCCAAGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPRESWNTKYLLWPTPNCEVLNG*QCFQVV Trigger: GACCACTTGGAAGCATTGGCAGCCATTGAGGACTTC...GCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | TCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGATTGGGGGACGTAGGATaGCACCACTTGGATTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLILTSVRTSSTWLPAVGLGDVG*HHLDFC Trigger: ACAGAAATCCAAGTGGTGCCATCCTACGTCCCCCAA...TCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTGGGCCCACTACCACCTaGGAAGTGAGAACACAGTAT | + |
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Preference number: 4 (lower is better) Translates to: KLEHKVLTLAHPQLQGLSGPTTT*EVRTQY Trigger: ATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCC...AGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS-3UTR CCA 90 bp | CTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGAGAAGAAGTCCTCAATaGCTGCCAATGCTTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LTLAHPQLQGLSRVPLTQRRSPQ*LPMLPS Trigger: ACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCT...CTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | ACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCAGGGCTCCAGGCTTTaGGCAGAGGAAGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TSCSLLFPKGKLEHKVLTQGSRL*AEEAAR Trigger: CCTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTG...AGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTCTACCACCTGGGAAGTaGGAACACAGTATGGCTTCN | + |
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Preference number: 4 (lower is better) Translates to: KLEHKVLTLAHPQLQGLSLPPGK*EHSMAS Trigger: NGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAG...AGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAGATTGGTGTATTTGTaGTCCAGCAGCCACTCGAAC | + |
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Preference number: 4 (lower is better) Translates to: FPHPNFSQDEQHMAASSRRLVYL*SSSHSN Trigger: GTTCGAGTGGCTGCTGGAGCACAAATACACCAATCT...CCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS-3UTR GCA 90 bp | CAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTCTCAATGGCTGCCAATaGTTCCAAGTGGTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QDEQHMAASSRKNTVVATLNGCQ*FQVVSC Trigger: GCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAG...AGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTCTCAATGGCTGCCAATaGTTCCAAGTGGTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PNFSQDEQHMAASSRKNTLNGCQ*FQVVSC Trigger: GCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAG...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS-3UTR GCA 90 bp | CTCATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAGAAGTCCTCAATGGCTaGCAATGCTTCCAAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LILTSVRTSSTWLPAVGREVLNG*QCFQVV Trigger: GACCACTTGGAAGCATTGGCAGCCATTGAGGACTTC...TCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGATGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGGGTATAGCTCTGATGTaGTTATCCGAACAACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKLEHKVLTLAHPQLQGLGIALM*LSEQRW Trigger: CCAACGTTGTTCGGATAATCACATCAGAGCTATACC...CAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCCTCTCAGCCACTGGATaGACCTCTGCAGCTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALYCSPRESWNTKYLLWPLSATG*TSAAVD Trigger: ATCAACAGCTGCAGAGGTTCATCCAGTGGCTGAGAG...GGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGTCAGTCATCTTCGGATaGCTCTTCTTCTGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPKGKLEHKVLTLAHPQLSVIFG*LFFCLS Trigger: AGAGAGGCAGAAGAAGAGTCATCCGAAGATGACTGA...CAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTATCAGTCATCTTCGGATaGCTCTTCTTCTGCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLTLAHPQLQGLSRVPLSVIFG*LFFCLS Trigger: AGAGAGGCAGAAGAAGAGTCATCCGAAGATGACTGA...TAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGGATTGTAACACCTGTTaGGCCTCACACCTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPKGKLEHKVLTLAHPQLDCNTC*ASHLSA Trigger: AGCTGAAAGGTGTGAGGCTCAACAGGTGTTACAATC...CAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCACAGAGCAGAGATTaGTGTATTTGTGCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLEHKVLTLAHPQLQGLSQSRD*CICAPA Trigger: TGCTGGAGCACAAATACACCAATCTCTGCTCTGTGA...CAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | CTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCAGCCTCTCTCAGCCACTaGATGAACCTCTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQGKAGTQSTYSGPASLSH*MNLCSC Trigger: ACAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGC...TGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCACTACCACCTGGGAAGTaGGAACACAGTATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHMAASSRKNTVVATSVPLPPGK*EHSMAS Trigger: TGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAG...TGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCATGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGTTGTGTCTCTTTGGCTaGACCAGCTCAAGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKGKLEHKVLTLAHPQLQLCLFG*TSSRLF Trigger: AAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAA...CTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCTTGTGTCTCTTTGGCTaGACCAGCTCAAGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRESWNTKYLLWPTPNCLCLFG*TSSRLF Trigger: AAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAA...GCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGAGTTCCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACCTCAATGGCTGCCAATaGTTCCAAGTGGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVPLTQSNFPHPNFSQDLNGCQ*FQVVSC Trigger: GCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAG...GTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGGAACTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCACTGGATGAACCTCTaGAGCTGCAAGGAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGHWMNL*SCKEAE Trigger: CTCTGCTTCCTTGCAGCTGCAGAGGTTCATCCAGTG...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148714.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGAAGAACCCTGTTGGTaGCGCTGTCCACAGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLFTVPQGKAGTQSTYSEEPCW*RCPQPS Trigger: TGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTC...AGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTAGTACATGTGTAGGTTaGAGACCCGGGCACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSLVTRTANEMHGSGSSTCVG*RPGHHI Trigger: AATATGGTGCCCGGGTCTCCAACCTACACATGTACT...ACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAAGAAGAAGTCCTCAATaGCTGCCAATGCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWNTKYLLWPTPNCRVCLRRSPQ*LPMLPS Trigger: ACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCT...TAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | CACATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAGCCTCTCTCAGCCACTaGATGAACCTCTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMAASSRKNTVVATSVPIASLSH*MNLCSC Trigger: ACAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGC...TATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCATGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTAAGTGTTCTTTGATCTaGGCAGCTTTCCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNFSQDEQHMAASSRKNTKCSLI*AAFQQQ Trigger: TTGCTGCTGGAAAGCTGCTCAGATCAAAGAACACTT...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTTCAAGGCCAACTTCTaGTGGATTGTAACACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAGTQSTYSGPPPTAGSVFKANF*WIVTPV Trigger: AACAGGTGTTACAATCCAGCAGAAGTTGGCCTTGAA...GACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATAATCTTCCTCTGCATCTaGAGGATGCAAAGAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSVRTSSTWLPAVGRIIFLCI*RMQRDH Trigger: GTGATCTCTTTGCATCCTCCAGATGCAGAGGAAGAT...TATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR GCA 90 bp | GACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTTCCAAGTGGTCAGCTaGACGCTTTATGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQLLFTVPQGKAGTQSTYFQVVS*TLYVVP Trigger: AGGAACTACATAAAGCGTGCAGCTGACCACTTGGAA...GTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCATCTTCCTCTGCATCTaGAGGATGCAAAGAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGIFLCI*RMQRDH Trigger: GTGATCTCTTTGCATCCTCCAGATGCAGAGGAAGAT...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTGAATCATCACTAAACTaGCCATCATCTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNFSQDEQHMAASSRKNTESSLN*PSSSSS Trigger: GGAAGATGAAGATGATGGCCAGTTTAGTGATGATTC...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTGAATCATCACTAAACTaGCCATCATCTTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSLVTRTANEMHGSGSESSLN*PSSSSS Trigger: GGAAGATGAAGATGATGGCCAGTTTAGTGATGATTC...ACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTTGTGTCTCTTTGGCTaGACCAGCTCAAGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DQLLFTVPQGKAGTQSTYLCLFG*TSSRLF Trigger: AAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAA...GTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACTTCAAGGCCAACTTCTaGTGGATTGTAACCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLFPKGKLEHKVLTLAHFKANF*WIVTFQ Trigger: CTGAAAGGTTACAATCCAGCAGAAGTTGGCCTTGAA...GTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR GCA 90 bp | AGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTCTGCCGGAAGTCCTCAATGGCTaGCAATGCTTCCAAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRKNTVVATSVPIILSLPEVLNG*QCFQVV Trigger: GACCACTTGGAAGCATTGGCAGCCATTGAGGACTTC...CGGCAGACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | CACATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAAGTGAGAACACAGTATaGCTTCAGTTTGACTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HMAASSRKNTVVATSVPISENTV*LQFDSL Trigger: GAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACT...TATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCAAGGCCAACTTCTGCTaGATTGTAACCTTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGKANFC*IVTFQL Trigger: AAGCTGAAAGGTTACAATCCAGCAGAAGTTGGCCTT...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | GACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCAGTTGTGTCTCTTTaGCTGAACCAGCTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: DQLLFTVPQGKAGTQSTYSVVSL*LNQLKI Trigger: AATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGA...GTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCATCAGTTGTGTCTCTTTaGCTGAACCAGCTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFTVPQGKAGTQSTYSGPSVVSL*LNQLKI Trigger: AATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGA...TGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTTCAGTTGTGTCTCTTTaGCTGAACCAGCTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TSCSLLFPKGKLEHKVLTSVVSL*LNQLKI Trigger: AATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGA...AGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTTCTGTAAGTGTTCTTTaGTCTGAGCAGCTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAASSRKNTVVATSVPIISVSVL*SEQLSS Trigger: GCTGGAAAGCTGCTCAGATCAAAGAACACTTACAGA...AATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR TCA 90 bp | AGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTCTGCCGAGTCAAAATTGTCTGTaGAGAGCTGAGCTACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKNTVVATSVPIILSLPSQNCL*RAELPE Trigger: CTCAGGTAGCTCAGCTCTTCACAGACAATTTTGACT...CGGCAGACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR GCA 90 bp | AGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTCTGCCGTTCCAAGTGGTCAGCTaGACGCTTTATGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKNTVVATSVPIILSLPFQVVS*TLYVVP Trigger: AGGAACTACATAAAGCGTGCAGCTGACCACTTGGAA...CGGCAGACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTAGTGAAGTTTACTTCTaGAGTGAGAGGGTAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: MAASSRKNTVVATSVPIISEVYF*SERVDP Trigger: TGGGTCTACCCTCTCACTCCAGAAGTAAACTTCACT...AATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CCA 90 bp | GCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTAGAAGAAGTCCTCAATaGCTGCCAATGCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSRKNTVVATSVPIILSRRSPQ*LPMLPS Trigger: ACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCT...ACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR TCA 90 bp | AGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTCTGCCGGAGCAGATGCTGATGTaGCAGTCCAACAAATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKNTVVATSVPIILSLPEQMLM*QSNKSY Trigger: ATATGATTTGTTGGACTGTCACATCAGCATCTGCTC...CGGCAGACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTCTCCTCCTCCGCACCTaGGGTTCCCCCGCCGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KLEHKVLTLAHPQLQGLSLLLRT*GSPAAR Trigger: TCGGGCGGCGGGGGAACCCAAGGTGCGGAGGAGGAG...AGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | AGCGCCGGAGGCCTTGGGTCTTCTGGAAGTGAAGAACCCTGTTGGTaGCGCTGTCCACAGCCATCACCACGTTGTCCTCATGGCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAGGLGSSGSEEPCW*RCPQPSPRCPHGSV Trigger: CACGCTGCCATGAGGACAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCCTCCGGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGTCTAACCAGGCCATCGACTTGTaGCAGGGGGAACTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAHPQLQGLSRVPLTQSNQAIDL*QGELQD Trigger: GTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTG...GTTAGACTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS CCA 90 bp | AAAAGCGCCGGAGGCCTTGGGTCTTCTGGAAGTGAAGAACCCTGTTaGTGGCGCTGTCCACAGCCATCACCACGTTGTCCTCATGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSAGGLGSSGSEEPC*WRCPQPSPRCPHGS Trigger: GCTGCCATGAGGACAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCCTCCGGCGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | GCTCCAGGCTTTGAGCAGAGGAAGCAGCAAGGCACAGTAGCGGTTTaGGTCAAGCAGGCCATCGACTTGTTGCAGGGGGAACTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: APGFEQRKQQGTVAV*VKQAIDLLQGELQD Trigger: GTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGTGCCTTGCTGCTTCCTCTGCTCAAAGCCTGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCACCGAGCGCACCAAGGCCTaGGCATCGACGTCACGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SALLLRGQPMRCTDLAVTERTKA*ASTSRR Trigger: CCTCCGTGACGTCGATGCCAAGGCCTTGGTGCGCTC...GGTGACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | ATCACCGAGCCCTCCGGCAGCGTGATGTCTGGGCCCACTACCACCTaGGAAGTGAGAACACAGTATGGCTTCAGTTTGACTCGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ITEPSGSVMSGPTTT*EVRTQYGFSLTRSL Trigger: CAAGGAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCGGAGGGCTCGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | TGGAGGATGCAAAGAGATCACCGAGCCCTCCGGCAGCGTGATGTCTaGGCCCACTACCACCTGGGAAGTGAGAACACAGTATGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WRMQRDHRALRQRDV*AHYHLGSENTVWLQ Trigger: CTGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCGGAGGGCTCGGTGATCTCTTTGCATCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS TCA 90 bp | CTCAATGGAAAGGAAAAGCGCCGGAGGCCTTGGGTCTTCTGGAAGTaGAGAACCCTGTTGGTGGCGCTGTCCACAGCCATCACCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNGKEKRRRPWVFWK*RTLLVALSTAITTL Trigger: CAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCCTCCGGCGCTTTTCCTTTCCATTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS GCA 90 bp | GACCTCGTTCTGGAAAACTCTGATGTCATCCAGCTGAGGGGAGCCTaGTCGGCTGTCCAGCTCCTCAGGATCCACACTTCCCTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLVLENSDVIQLRGA*SAVQLLRIHTSLTF Trigger: GAAAGTGAGGGAAGTGTGGATCCTGAGGAGCTGGACAGCCGAGCAGGCTCCCCTCAGCTGGATGACATCAGAGTTTTCCAGAACGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS CCA 90 bp | TGGAGGATGCAAAGAGATCACCGAGCCCTCCGGCAGCGTGATGTCTaGGCCCACTACCACCTGGGAAGTGAGAACACAGTATGGCTTCNN | + |
|
Preference number: 5 (lower is better) Translates to: WRMQRDHRALRQRDV*AHYHLGSENTVWLX Trigger: NNGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCGGAGGGCTCGGTGATCTCTTTGCATCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCACCCAGGCCATCGACTTGTaGCAGGGGGAACTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SALLLRGQPMRCTDLAVTQAIDL*QGELQD Trigger: GTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTG...GGTGACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGACAGGGCTCCAGGCTTaGAGCAGAGGAAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PKGKLEHKVLTLAHPQLQTGLQA*SRGSSK Trigger: CTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTGT...CTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAAAAGCGCCGGAGGCCTaGGGTCTTCTGGAAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SWNTKYLLWPTPNCRVCLKAPEA*GLLEVK Trigger: CTTCACTTCCAGAAGACCCAAGGCCTCCGGCGCTTT...TAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTAAGCAGGCCATCGACTaGTTGCAGGGGGAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESWNTKYLLWPTPNCRVCKQAID*LQGELQ Trigger: CTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTT...ACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCAAGCAGGCCATCGACTaGTTGCAGGGGGAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAGTQSTYSGPPPTAGSVKQAID*LQGELQ Trigger: CTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTT...GACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCTCTTGTTACGAGGACAGCCAATGAGATGCACGGATCTGGCAGTCACCACAGGGCTCCAGGCTTaGAGCAGAGGAAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SALLLRGQPMRCTDLAVTTGLQA*SRGSSK Trigger: CTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTGT...GGTGACTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTACAGGGCTCCAGGCTTaGAGCAGAGGAAGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLEHKVLTLAHPQLQGLSTGLQA*SRGSSK Trigger: CTTGCTGCTTCCTCTGCTCAAAGCCTGGAGCCCTGT...AGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS CCA 90 bp | CAGTCCAACAAATCATATCGAATCTCCACTCCGTCTCCACTGCCCTaGAACAGGCTCAATGGAAAGGAAAAGCGCCGGAGGCCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSNKSYRISTPSPLP*NRLNGKEKRRRPWV Trigger: GACCCAAGGCCTCCGGCGCTTTTCCTTTCCATTGAGCCTGTTCCAGGGCAGTGGAGACGGAGTGGAGATTCGATATGATTTGTTGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | CGTGATGTCTGGGCCCACTACCACCTGGGAAGTGAGAACACAGTATaGCTTCAGTTTGACTCGCTCCTTGACCTCAGCTCTGTCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDVWAHYHLGSENTV*LQFDSLLDLSSVTE Trigger: CTCTGTGACAGAGCTGAGGTCAAGGAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCCAGACATCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CCA 90 bp | GGAATGAGTGTAGCTCTGGGTGGTGCTGTCAGTGAAGTTTACTTCTaGAGTGAGAGGGTAGACCCATCGGCGGATGACGTCAGCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GMSVALGGAVSEVYF*SERVDPSADDVSTN Trigger: GTTTGTGCTGACGTCATCCGCCGATGGGTCTACCCTCTCACTCCAGAAGTAAACTTCACTGACAGCACCACCCAGAGCTACACTCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGAGTTCCCCTAACGCAGGTAGGATGGCACCACTaGGATTTCTGTAAGTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTLAHPQLQGLSRVPLTQVGWHH*DFCKCS Trigger: AGAACACTTACAGAAATCCAAGTGGTGCCATCCTAC...CTGCGTTAGGGGAACTCTAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACCTTTCCTCCTCCGTCTaGATCATGAGTCCCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLTQSNFPHPNFSQDEQHLSSSV*IMSPQR Trigger: TCTCTGGGGACTCATGATCAAGACGGAGGAGGAAAG...GTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCAGGCCATCGACTTGTaGCAGGGGGAACTCCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGQAIDL*QGELQD Trigger: GTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTG...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATAAAGCAGGCCATCGACTaGTTGCAGGGGGAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILTSVRTSSTWLPAVGRIKQAID*LQGELQ Trigger: CTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTT...TATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCGTCACAGAGCAGAGATaGGTGTATTTGTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAGTQSTYSGPPPTAGSVVTEQR*VYLCSS Trigger: GCTGGAGCACAAATACACCAATCTCTGCTCTGTGAC...GACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTCTTTCCTCCTCCGTCTaGATCATGAGTCCCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PNFSQDEQHMAASSRKNTLSSSV*IMSPQR Trigger: TCTCTGGGGACTCATGATCAAGACGGAGGAGGAAAG...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGCACAAAGCCATCAGGACCTaGGCCATGGAAGTAACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLTQSNFPHPNFSQDEQHKAIRT*AMEVTR Trigger: TCTCGTTACTTCCATGGCCAAGGTCCTGATGGCTTT...GTGCTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCAGTTGTGTCTCTTaGGCTGAACCAGCTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GKAGTQSTYSGPPPTAGSVSCVS*AEPAQD Trigger: ATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGAC...AGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGAGTTCCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACTTGGTGATGGAGCAGTaGCTGCCGATGACAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVPLTQSNFPHPNFSQDLVMEQ*LPMTVP Trigger: TGGCACTGTCATCGGCAGCAACTGCTCCATCACCAA...GTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGGAACTCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | GTTCCCCTAACGCAGTCTAACTTCCCTCATCCTAACTTCAGTCAGGACGAGCAGAAAGCCATCAGGACCTaGGCCATGGAAGTAACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPLTQSNFPHPNFSQDEQKAIRT*AMEVTR Trigger: TCTCGTTACTTCCATGGCCAAGGTCCTGATGGCTTT...CTGCTCGTCCTGACTGAAGTTAGGATGAGGGAAGTTAGACTGCGTTAGGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCGTCAGTTGTGTCTCTTaGGCTGAACCAGCTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KAGTQSTYSGPPPTAGSVVSCVS*AEPAQD Trigger: ATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGAC...GACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCTAGTCAGTTGTGTCTCTTaGGCTGAACCAGCTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SWNTKYLLWPTPNCRVCLVSCVS*AEPAQD Trigger: ATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGAC...TAGACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS TCA 90 bp | GATTCTTCCGTAACTGCTGGCCTTCGTCAGTTGTGTCTCTTTGGCTaGACCAGCTCAAGATTGTTTCCTCAGCCAAGATCTCCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSSVTAGLRQLCLFG*TSSRLFPQPRSPAG Trigger: ACCAGCTGGAGATCTTGGCTGAGGAAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCGAGTACATGTGTAGGTaGGAGACCCGGGCACCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGEYMCR*ETRAPY Trigger: ATATGGTGCCCGGGTCTCCAACCTACACATGTACTC...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | GAAAGCTGGAACACAAAGTACTTACTCTGGCCCACCCCCAACTGCAGGGTCTGTCACTTTCTCCTTTTCTaGGTCAGCTCCAGAATCATC | + |
|
Preference number: 5 (lower is better) Translates to: ESWNTKYLLWPTPNCRVCHFLLF*VSSRII Trigger: GATGATTCTGGAGCTGACCAAGAAAAGGAGAAAGTG...ACAGACCCTGCAGTTGGGGGTGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS CCA 90 bp | GAGCAGCTTTCCAGCAGCAAAAGACAAATGTTTCCTGTACACCCGTaGCAGTCAGGAACTCCAGAGTATAGTCAATTAGCGCAACGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EQLSSSKRQMFPVHP*QSGTPEYSQLAQRW Trigger: CCAACGTTGCGCTAATTGACTATACTCTGGAGTTCCTGACTGCCACGGGTGTACAGGAAACATTTGTCTTTTGCTGCTGGAAAGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTCTCAGTCTGCCGGGGAAGAAGCGGCGGTaGAAGCTATCGGCCACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRKNTVVATSVPIILSLPGKKRR*KLSATR Trigger: TCTAGTGGCCGATAGCTTCAACCGCCGCTTCTTCCC...CGGCAGACTGAGAATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | ATGGCTGCCAGCAGTAGGAAGAATACTGTAGTTGCAACTTCCGTTCCAATAATTTCAATTAGCGCAACGTaGGCCAGGGGCAAGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: MAASSRKNTVVATSVPIISISAT*ARGKRT Trigger: GGTCCTCTTGCCCCTGGCCAACGTTGCGCTAATTGA...AATTATTGGAACGGAAGTTGCAACTACAGTATTCTTCCTACTGCTGGCAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCAGAGATTGGTGTATTaGTGCTCCAGCAGCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TSCSLLFPKGKLEHKVLTQRLVY*CSSSHS Trigger: CGAGTGGCTGCTGGAGCACAAATACACCAATCTCTG...AGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CCTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTGCATGCTTGAGAGAGTaGATCTCCAGGACTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: PNFSQDEQHMAASSRKNTACLRE*ISRTRF Trigger: AAATCTAGTCCTGGAGATCAACTCTCTCAAGCATGC...AGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCCAAAAGCCATCAGGACCTaGGCCATGGAAGTAACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFTVPQGKAGTQSTYSGPKAIRT*AMEVTR Trigger: TCTCGTTACTTCCATGGCCAAGGTCCTGATGGCTTT...TGGGCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS TCA 90 bp | AGGTTGGAGACCCGGGCACCATATTCCCTAGTTGTCACATGCAAGTaGATCTGGTTTCCTAGGACCTCCTCATTCATTAATATGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLETRAPYSLVVTCK*IWFPRTSSFINMPR Trigger: ACGAGGCATATTAATGAATGAGGAGGTCCTAGGAAACCAGATTCACTTGCATGTGACAACTAGGGAATATGGTGCCCGGGTCTCCAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS GCA 90 bp | GGAAGTAACGAGAGTTTCATGTTCCAAGAAGAAGTCCTCAATGGCTaGCAATGCTTCCAAGTGGTCAGCTGCACGCTTTATGTAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSNESFMFQEEVLNG*QCFQVVSCTLYVVP Trigger: AGGAACTACATAAAGCGTGCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCTTGGAACATGAAACTCTCGTTACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CTAACTTCAGTCAGGACGAGCAGCACATGGCTGCCAGCAGTAGGAAGAATACTGAGGGCTCTGCAGATATaGATATTTGAGATGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSVRTSSTWLPAVGRILRALQI*IFEMTS Trigger: AGATGTCATCTCAAATATCAATATCTGCAGAGCCCT...CAGTATTCTTCCTACTGCTGGCAGCCATGTGCTGCTCGTCCTGACTGAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGGCCACTTTCTCCTTTTCTaGGTCAGCTCCAGAATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLFTVPQGKAGTQSTYSGHFLLF*VSSRII Trigger: GATGATTCTGGAGCTGACCAAGAAAAGGAGAAAGTG...GCCAGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCTCTTTACTGTTCCCCAAGGGAAAGCTGGAACACAAAGTACTTACTCTGCATGCTTGAGAGAGTaGATCTCCAGGACTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: QLLFTVPQGKAGTQSTYSACLRE*ISRTRF Trigger: AAATCTAGTCCTGGAGATCAACTCTCTCAAGCATGC...AGAGTAAGTACTTTGTGTTCCAGCTTTCCCTTGGGGAACAGTAAAGAGCAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
||
| CDS GCA 90 bp | CATGCAAGTGAATCTGGTTTCCTAGGACCTCCTCATTCATTAATATaGCTCGTACAAAATCATCTCGAGTTTGGTAGTCAAAATTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HASESGFLGPPHSLI*LVQNHLEFGSQNCL Trigger: CAGACAATTTTGACTACCAAACTCGAGATGATTTTGTACGAGGCATATTAATGAATGAGGAGGTCCTAGGAAACCAGATTCACTTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS CAA 72 bp | ACCCTGTTGGTGGCGCTGTCCACAGCCATCACCACGTaGTCCTCATGGCAGCGTGTAGGGTGGCTGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLLVALSTAITT*SSWQRVGWLGD Trigger: GTCACCCAGCCACCCTACACGCTGCCATGAGGACAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
||
| CDS TCA 72 bp | GCTGCAGCGTTCCCAGGACCTCGTTCTGGAAAACTCTaGTGTCATCCAGCTGAGGGGAGCCTGCTCGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAAFPGPRSGKL*CHPAEGSLLGC Trigger: ACAGCCGAGCAGGCTCCCCTCAGCTGGATGACATCAGAGTTTTCCAGAACGAGGTCCTGGGAACGCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS CAA 90 bp | CAGCAAGGCACAGTAGCGGTTTGGGTCAAGCAGGCCATCGACTTGTaGCAGGGGGAACTCCAGGACTACAAGGGTCAGGACCTGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: QQGTVAVWVKQAIDL*QGELQDYKGQDLHH Trigger: GTGATGCAGGTCCTGACCCTTGTAGTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGTGCCTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS TCA 72 bp | AAGGAAAAGCGCCGGAGGCCTTGGGTCTTCTGGAAGTaGAGAACCCTGTTGGTGGCGCTGTCCACAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: KEKRRRPWVFWK*RTLLVALSTAI Trigger: GATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCCTCCGGCGCTTTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | CTGGAAAACTCTGATGTCATCCAGCTGAGGGGAGCCTaGTCGGCTGTCCAGCTCCTCAGGATCCACACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LENSDVIQLRGA*SAVQLLRIHTS Trigger: GGAAGTGTGGATCCTGAGGAGCTGGACAGCCGAGCAGGCTCCCCTCAGCTGGATGACATCAGAGTTTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS CCA 72 bp | GGAGGCCTTGGGTCTTCTGGAAGTGAAGAACCCTGTTaGTGGCGCTGTCCACAGCCATCACCACGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GGLGSSGSEEPC*WRCPQPSPRCP Trigger: AGGACAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | CAAAGAGATCACCGAGCCCTCCGGCAGCGTGATGTCTaGGCCCACTACCACCTGGGAAGTGAGAACACAGTA | + |
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Preference number: 6 (lower is better) Translates to: QRDHRALRQRDV*AHYHLGSENTV Trigger: TACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCCAGACATCACGCTGCCGGAGGGCTCGGTGATCTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS CAA 72 bp | GGCACAGTAGCGGTTTGGGTCAAGCAGGCCATCGACTaGTTGCAGGGGGAACTCCAGGACTACAAGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GTVAVWVKQAID*LQGELQDYKGQ Trigger: CTGACCCTTGTAGTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CAA 90 bp | AAGCAGCAAGGCACAGTAGCGGTTTGGGTCAAGCAGGCCATCGACTaGTTGCAGGGGGAACTCCAGGACTACAAGGGTCAGGACCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: KQQGTVAVWVKQAID*LQGELQDYKGQDLH Trigger: ATGCAGGTCCTGACCCTTGTAGTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGTGCCTTGCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CCA 72 bp | TCAGGAACTCCAGAGTATAGTCAATTAGCGCAACGTTaGCCAGGGGCAAGAGGACCCGAGGCTGGTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGTPEYSQLAQR*PGARGPEAGPW Trigger: CCAAGGACCAGCCTCGGGTCCTCTTGCCCCTGGCCAACGTTGCGCTAATTGACTATACTCTGGAGTTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | GGCCTTGGGTCTTCTGGAAGTGAAGAACCCTGTTGGTaGCGCTGTCCACAGCCATCACCACGTTGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GLGSSGSEEPCW*RCPQPSPRCPH Trigger: ATGAGGACAACGTGGTGATGGCTGTGGACAGCGCCACCAACAGGGTTCTTCACTTCCAGAAGACCCAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 72 bp | ACAGTAGCGGTTTGGGTCAAGCAGGCCATCGACTTGTaGCAGGGGGAACTCCAGGACTACAAGGGTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TVAVWVKQAIDL*QGELQDYKGQD Trigger: GTCCTGACCCTTGTAGTCCTGGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CCA 72 bp | GTAGCTCTGGGTGGTGCTGTCAGTGAAGTTTACTTCTaGAGTGAGAGGGTAGACCCATCGGCGGATGACGTC | + |
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Preference number: 6 (lower is better) Translates to: VALGGAVSEVYF*SERVDPSADDV Trigger: GACGTCATCCGCCGATGGGTCTACCCTCTCACTCCAGAAGTAAACTTCACTGACAGCACCACCCAGAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | TTTGAGCAGAGGAAGCAGCAAGGCACAGTAGCGGTTTaGGTCAAGCAGGCCATCGACTTGTTGCAGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: FEQRKQQGTVAV*VKQAIDLLQGE Trigger: TTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACTGTGCCTTGCTGCTTCCTCTGCTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CAA 72 bp | CAGTTAGGGCCGATGACACTGTTGGTGATGGAGCAGTaGCTGCCGATGACAGTGCCAGCTCCCAAAAGCACA | + |
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Preference number: 6 (lower is better) Translates to: QLGPMTLLVMEQ*LPMTVPAPKST Trigger: TGTGCTTTTGGGAGCTGGCACTGTCATCGGCAGCAACTGCTCCATCACCAACAGTGTCATCGGCCCTAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | GGGCCCACTACCACCTGGGAAGTGAGAACACAGTATGGCTTCAGTTaGACTCGCTCCTTGACCTCAGCTCTGTCACAGAGCAGAGATTGG | + |
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Preference number: 6 (lower is better) Translates to: GPTTTWEVRTQYGFS*TRSLTSALSQSRDW Trigger: CCAATCTCTGCTCTGTGACAGAGCTGAGGTCAAGGAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACTTCCCAGGTGGTAGTGGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | CTCAGCTCTGTCACAGAGCAGAGATTGGTGTATTTGTaGTCCAGCAGCCACTCGAACTCCCTGCCACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSSVTEQRLVYL*SSSHSNSLPQV Trigger: TACCTGTGGCAGGGAGTTCGAGTGGCTGCTGGAGCACAAATACACCAATCTCTGCTCTGTGACAGAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | CCAATATGGCAGTTAGGGCCGATGACACTGTTGGTGATGGAGCAGTaGCTGCCGATGACAGTGCCAGCTCCCAAAAGCACATTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PIWQLGPMTLLVMEQ*LPMTVPAPKSTFSS Trigger: GGAGGAAAATGTGCTTTTGGGAGCTGGCACTGTCATCGGCAGCAACTGCTCCATCACCAACAGTGTCATCGGCCCTAACTGCCATATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | CATATATCAAGAGAAAGTCAGAGCGCACCAAGGCCTTaGCATCGACGTCACGGAGGACGTCTCCTAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: HISRESQSAPRP*HRRHGGRLLVI Trigger: GATCACTAGGAGACGTCCTCCGTGACGTCGATGCCAAGGCCTTGGTGCGCTCTGACTTTCTCTTGATATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | AAATCATATCGAATCTCCACTCCGTCTCCACTGCCCTaGAACAGGCTCAATGGAAAGGAAAAGCGCCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KSYRISTPSPLP*NRLNGKEKRRR Trigger: CCTCCGGCGCTTTTCCTTTCCATTGAGCCTGTTCCAGGGCAGTGGAGACGGAGTGGAGATTCGATATGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CCA 72 bp | ACTAAACTGGCCATCATCTTCATCTTCCTCTGCATCTaGAGGATGCAAAGAGATCACCGAGCCCTCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TKLAIIFIFLCI*RMQRDHRALRQ Trigger: CTGCCGGAGGGCTCGGTGATCTCTTTGCATCCTCCAGATGCAGAGGAAGATGAAGATGATGGCCAGTTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003320.14 ENSMUST00000231315.2 |
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| CDS CAA 72 bp | CCATATATCAAGAGAAAGTCAGAGCGCACCAAGGCCTaGGCATCGACGTCACGGAGGACGTCTCCTAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: PYIKRKSERTKA*ASTSRRTSPSD Trigger: ATCACTAGGAGACGTCCTCCGTGACGTCGATGCCAAGGCCTTGGTGCGCTCTGACTTTCTCTTGATATATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 72 bp | ACCACCTGGGAAGTGAGAACACAGTATGGCTTCAGTTaGACTCGCTCCTTGACCTCAGCTCTGTCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TTWEVRTQYGFS*TRSLTSALSQS Trigger: GCTCTGTGACAGAGCTGAGGTCAAGGAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACTTCCCAGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | ATGACATCTCCATATATCAAGAGAAAGTCAGAGCGCACCAAGGCCTaGGCATCGACGTCACGGAGGACGTCTCCTAGTGATCGGTATAGC | + |
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Preference number: 6 (lower is better) Translates to: MTSPYIKRKSERTKA*ASTSRRTSPSDRYS Trigger: GCTATACCGATCACTAGGAGACGTCCTCCGTGACGTCGATGCCAAGGCCTTGGTGCGCTCTGACTTTCTCTTGATATATGGAGATGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | AGTACCACATTATCACCAATATGGCAGTTAGGGCCGATGACACTGTaGGTGATGGAGCAGTTGCTGCCGATGACAGTGCCAGCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: STTLSPIWQLGPMTL*VMEQLLPMTVPAPK Trigger: TTTGGGAGCTGGCACTGTCATCGGCAGCAACTGCTCCATCACCAACAGTGTCATCGGCCCTAACTGCCATATTGGTGATAATGTGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 72 bp | TTATCACCAATATGGCAGTTAGGGCCGATGACACTGTaGGTGATGGAGCAGTTGCTGCCGATGACAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPIWQLGPMTL*VMEQLLPMTVP Trigger: TGGCACTGTCATCGGCAGCAACTGCTCCATCACCAACAGTGTCATCGGCCCTAACTGCCATATTGGTGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | TTTCCAGAGGTATCCCTGGCCTTCAAGGCCAACTTCTaGTGGATTGTAACACCTGTTGAGCCTCACACCTTT | + |
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Preference number: 6 (lower is better) Translates to: FPEVSLAFKANF*WIVTPVEPHTF Trigger: AAAGGTGTGAGGCTCAACAGGTGTTACAATCCAGCAGAAGTTGGCCTTGAAGGCCAGGGATACCTCTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
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| CDS CCA 72 bp | TTCCGTAACTGCTGGCCTTCGTCAGTTGTGTCTCTTTaGCTGAACCAGCTCAAGATTGTTTCCTCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FRNCWPSSVVSL*LNQLKIVSSAK Trigger: CTTGGCTGAGGAAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CAA 72 bp | ATGACGTCAGCACAAACAGCTGAGTACATGTGTAGGTaGGAGACCCGGGCACCATATTCCCTAGTTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: MTSAQTAEYMCR*ETRAPYSLVVT Trigger: TGTGACAACTAGGGAATATGGTGCCCGGGTCTCCAACCTACACATGTACTCAGCTGTTTGTGCTGACGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | ACCTGGGAAGTGAGAACACAGTATGGCTTCAGTTTGACTCGCTCCTaGACCTCAGCTCTGTCACAGAGCAGAGATTGGTGTATTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TWEVRTQYGFSLTRS*TSALSQSRDWCICA Trigger: AGCACAAATACACCAATCTCTGCTCTGTGACAGAGCTGAGGTCAAGGAGCGAGTCAAACTGAAGCCATACTGTGTTCTCACTTCCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS TCA 72 bp | GTAACTGCTGGCCTTCGTCAGTTGTGTCTCTTTGGCTaGACCAGCTCAAGATTGTTTCCTCAGCCAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: VTAGLRQLCLFG*TSSRLFPQPRS Trigger: AGATCTTGGCTGAGGAAACAATCTTGAGCTGGTTCAGCCAAAGAGACACAACTGACGAAGGCCAGCAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CAA 90 bp | TCTCCTAGTGATCGGTATAGCTCTGATGTGATTATCCGAACAACGTaGGGGGACGTAGGATGGCACCACTTGGATTTCTGTAAGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPSDRYSSDVIIRTT*GDVGWHHLDFCKCS Trigger: AGAACACTTACAGAAATCCAAGTGGTGCCATCCTACGTCCCCCAACGTTGTTCGGATAATCACATCAGAGCTATACCGATCACTAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | TTTCCAGAGGTATCCCTGGCCTTCAAGGCCAACTTCTaGTGGATTGTAACCTTTCAGCTTCACTTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FPEVSLAFKANF*WIVTFQLHFLL Trigger: AAGGAGAAAGTGAAGCTGAAAGGTTACAATCCAGCAGAAGTTGGCCTTGAAGGCCAGGGATACCTCTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | GAGAGTTTCATGTTCCAAGAAGAAGTCCTCAATGGCTaGCAATGCTTCCAAGTGGTCAGCTGCACGCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ESFMFQEEVLNG*QCFQVVSCTLY Trigger: ATAAAGCGTGCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCTTGGAACATGAAACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS CCA 72 bp | TCCAGCAGCAAAAGACAAATGTTTCCTGTACACCCGTaGCAGTCAGGAACTCCAGAGTATAGTCAATTAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSSKRQMFPVHP*QSGTPEYSQLA Trigger: CGCTAATTGACTATACTCTGGAGTTCCTGACTGCCACGGGTGTACAGGAAACATTTGTCTTTTGCTGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS TCA 72 bp | ACCCGGGCACCATATTCCCTAGTTGTCACATGCAAGTaGATCTGGTTTCCTAGGACCTCCTCATTCATTAAT | + |
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Preference number: 6 (lower is better) Translates to: TRAPYSLVVTCK*IWFPRTSSFIN Trigger: ATTAATGAATGAGGAGGTCCTAGGAAACCAGATTCACTTGCATGTGACAACTAGGGAATATGGTGCCCGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS TCA 72 bp | CTTCAAGGCCAACTTCTGCTGGATTGTAACACCTGTTaGGCCTCACACCTTTCAGCTTCACTTTCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LQGQLLLDCNTC*ASHLSASLSPF Trigger: AAAAGGAGAAAGTGAAGCTGAAAGGTGTGAGGCTCAACAGGTGTTACAATCCAGCAGAAGTTGGCCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231315.2 |
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| CDS GCA 72 bp | TTCATGTTCCAAGAAGAAGTCCTCAATGGCTGCCAATaGTTCCAAGTGGTCAGCTGCACGCTTTATGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: FMFQEEVLNGCQ*FQVVSCTLYVV Trigger: AACTACATAAAGCGTGCAGCTGACCACTTGGAAGCATTGGCAGCCATTGAGGACTTCTTCTTGGAACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003320.14 ENSMUST00000148714.2 ENSMUST00000231315.2 |
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| CDS TCA 72 bp | CCTGTGTTCCTCCAGGGCTCTGCAGATATTGATATTTaGGATGACATCTCCATATATCAAGAGAAAGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PVFLQGSADIDI*DDISIYQEKVR Trigger: TCTGACTTTCTCTTGATATATGGAGATGTCATCTCAAATATCAATATCTGCAGAGCCCTGGAGGAACACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 90 bp | TCTAGCTTCCTTCTTAACCTGTGTTCCTCCAGGGCTCTGCAGATATaGATATTTGAGATGACATCTCCATATATCAAGAGAAAGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSFLLNLCSSRALQI*IFEMTSPYIKRKSE Trigger: CTCTGACTTTCTCTTGATATATGGAGATGTCATCTCAAATATCAATATCTGCAGAGCCCTGGAGGAACACAGGTTAAGAAGGAAGCTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS GCA 72 bp | GAATCTGGTTTCCTAGGACCTCCTCATTCATTAATATaGCTCGTACAAAATCATCTCGAGTTTGGTAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ESGFLGPPHSLI*LVQNHLEFGSQ Trigger: TTGACTACCAAACTCGAGATGATTTTGTACGAGGCATATTAATGAATGAGGAGGTCCTAGGAAACCAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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| CDS CAA 72 bp | CTTCTTAACCTGTGTTCCTCCAGGGCTCTGCAGATATaGATATTTGAGATGACATCTCCATATATCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLNLCSSRALQI*IFEMTSPYIKR Trigger: TCTCTTGATATATGGAGATGTCATCTCAAATATCAATATCTGCAGAGCCCTGGAGGAACACAGGTTAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003320.14 |
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