Pregenerated sensors for EIF2B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028683Ensembl transcript IDs: ENSMUST00000070610.6, ENSMUST00000106447.9, ENSMUST00000106448.9
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTaGGTCCTCCTGCTCGGAAGTTCTGCTGTACTGAGATTCCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPLSLYSNAGSGEQP*VLLLGSSAVLRFPV Trigger: GACTGGGAATCTCAGTACAGCAGAACTTCCGAGCAGGAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | TGTGCCTCTGCCTCAAGGCAGCTCTGGGACAGTCACAGGGGAAAATaGCACTTAGGCATTGTCACAATGTCACTGCAGCACTGGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CASASRQLWDSHRGK*HLGIVTMSLQHWEG Trigger: CCCTTCCCAGTGCTGCAGTGACATTGTGACAATGCCTAAGTGTCATTTTCCCCTGTGACTGTCCCAGAGCTGCCTTGAGGCAGAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR GCA 90 bp | TATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTaGCTCTGCCTCAAGGCAGCTCTGGGACAGTCACAGGGGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: YREACPQSTVCPLLL*LCLKAALGQSQGKM Trigger: CATTTTCCCCTGTGACTGTCCCAGAGCTGCCTTGAGGCAGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | GTACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTaGCGTCCTGGGTACAGGAGTGCCTACTGTGCTACTGAGGAACCG | + |
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Preference number: 1 (lower is better) Translates to: VQECLTMLQILPSGS*RPGYRSAYCATEEP Trigger: CGGTTCCTCAGTAGCACAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | CAGAGAGGGGCACTAGAGCCTCTAAGCTGGAGTTATGGGCAATTGTaGACTGCTAGATGTACATACTGGGAACCACACTTGGGTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QRGALEPLSWSYGQL*TARCTYWEPHLGPL Trigger: CAGAGGACCCAAGTGTGGTTCCCAGTATGTACATCTAGCAGTTCACAATTGCCCATAACTCCAGCTTAGAGGCTCTAGTGCCCCTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CCA 90 bp | CATTGTCACAATGTCACTGCAGCACTGGGAAGGGCTCACTACTGTTaGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACAGGAGCACTG | + |
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Preference number: 1 (lower is better) Translates to: HCHNVTAALGRAHYC*TLRKSSQQFLTGAL Trigger: CAGTGCTCCTGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGAGCCCTTCCCAGTGCTGCAGTGACATTGTGACAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | CAGGTGATCTGTGTGAGTGAGTTCAGGGCCAGTATAGTGTACTGGTaGGTTTTAGGCCAGCCAGGGCTACACACCAATCTCTTATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QVICVSEFRASIVYW*VLGQPGLHTNLLCF Trigger: GAAGCATAAGAGATTGGTGTGTAGCCCTGGCTGGCCTAAAACTCACCAGTACACTATACTGGCCCTGAACTCACTCACACAGATCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | ATAAATAAAGAGTCAAAACAGGTGGGCCAGGCAGCATCTGTAGTTTaGGGCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: INKESKQVGQAASVV*GPKEGVGLVQGSDF Trigger: GAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTTGACTCTTTATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
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| 3UTR TCA 90 bp | ATTCTCAACCGCAGGGCCATCTCTCCAGGCCCCAGCTTTGGACTTTaGATAGAGTTGGAAGCGTTAAAGATTATGGGGCTGTTCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ILNRRAISPGPSFGL*IELEALKIMGLFCS Trigger: AGAACAGAACAGCCCCATAATCTTTAACGCTTCCAACTCTATTCAAAGTCCAAAGCTGGGGCCTGGAGAGATGGCCCTGCGGTTGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR GCA 90 bp | AGTACTAGGCCAGCTTGGGTTAAAGTCAAAATGTATAGAGAAGCTTaGCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: STRPAWVKVKMYREA*PQSTVCPLLLCLCL Trigger: GAGGCAGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACATTTTGACTTTAACCCAAGCTGGCCTAGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CCA 90 bp | AGTTCTGCTGTACTGAGATTCCCAGTCCAGTTAGTCACTCTGAACTaGAACAGACGGTTTTCTCCAGTGACTTGTTACGAGTGTGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SSAVLRFPVQLVTLN*NRRFSPVTCYECGV Trigger: CACACCACACTCGTAACAAGTCACTGGAGAAAACCGTCTGTTCCAGTTCAGAGTGACTAACTGGACTGGGAATCTCAGTACAGCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CCA 90 bp | CTAGGCTTAAATTTGAAATCCTATTCCCTCTGGCTCCTGAAGTCCTaGGGTACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LGLNLKSYSLWLLKS*GTGMSNYVADSSLW Trigger: CCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGTACCCCAGGACTTCAGGAGCCAGAGGGAATAGGATTTCAAATTTAAGCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 90 bp | CGCCTAAGCCCCAGCTGTGTAGTCTTTGAGTGTGAACTTTGTAGATaGCAATGGTGTATCATGATGTCAAAAGTTTGGTATGCCTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: RLSPSCVVFECELCR*QWCIMMSKVWYAFK Trigger: CTTGAAGGCATACCAAACTTTTGACATCATGATACACCATTGTCATCTACAAAGTTCACACTCAAAGACTACACAGCTGGGGCTTAGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CCA 90 bp | ATACAACCTTTTGATCTTATTCTTTGGACACAGTGTAGCCCAGGTTaGCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTA | + |
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Preference number: 1 (lower is better) Translates to: IQPFDLILWTQCSPG*LLNMGPPASVSQML Trigger: TAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGCCAACCTGGGCTACACTGTGTCCAAAGAATAAGATCAAAAGGTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCAGATTTCCATGAGCTaGTCATTCCCCACGATCACC | + |
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Preference number: 2 (lower is better) Translates to: TGGPGSICSLRPKGRGRAQISMS*SFPTIT Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAAATCTG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
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| 3UTR-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGGGTTCAGATTTCCATaGGCTGGTCATTCCCCACGA | + |
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Preference number: 2 (lower is better) Translates to: KTGGPGSICSLRPKGRGRGFRFP*AGHSPR Trigger: TCGTGGGGAATGACCAGCTCATGGAAATCTGAACCC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
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| 3UTR-3UTR TCA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCCAGTTGAAGGATTGCTaGACCCAGGACTTCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLQLKDC*TQDFKD Trigger: ATCCTTGAAGTCCTGGGTTCAGCAATCCTTCAACTG...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATTTGTCACAATGTCACTaGAGCACTGGGAAGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYLSQCH*STGKGS Trigger: TGAGCCCTTCCCAGTGCTGCAGTGACATTGTGACAA...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGCTTCCCTCTGGCTCCTaGCGTCCTGGGTACAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: MGPPASVSQMLRICYYTELPSGS*RPGYRS Trigger: ACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAG...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTGCACTGTGTTCTGGTGTaGGAGGGTAGAAGTGATATT | + |
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Preference number: 2 (lower is better) Translates to: VADSSLWLLTSWVQECLLHCVLV*EGRSDI Trigger: AATATCACTTCTACCCTCCCACACCAGAACACAGTG...CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATGCTAGATGTACATACTaGGAACCACACTTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYARCTY*EPHLGP Trigger: AGGACCCAAGTGTGGTTCCCAGTATGTACATCTAGC...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CAA 90 bp | GCATTGTCACAATGTCACTGCAGCACTGGGAAGGGCTCACTACTGTaGGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACAGGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: ALSQCHCSTGKGSLL*DPKEEFSAVSHRST Trigger: AGTGCTCCTGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGAGCCCTTCCCAGTGCTGCAGTGACATTGTGACAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTGGTAGAAGTGATATTCTaGGTTCATGTCACTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VADSSLWLLTSWVQECLLVEVIF*VHVTVE Trigger: CTCCACAGTGACATGAACTCAGAATATCACTTCTAC...CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGGGCCAGTATAGTGTACTGGTGAGTTTTAGGCCAGCCAGGGCTACACACAGACTCAGGTCCTCATaGCTGTGTAGCAAGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VQGQYSVLVSFRPARATHRLRSS*LCSKCS Trigger: AGAACACTTGCTACACAGGCATGAGGACCTGAGTCT...GTGTGTAGCCCTGGCTGGCCTAAAACTCACCAGTACACTATACTGGCCCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGAAGCAGAGGGCATATaGGTAGGAGGCCAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: MGPPASVSQMLRICYYTEEAEGI*VGGQTG Trigger: CCCAGTCTGGCCTCCTACCCATATGCCCTCTGCTTC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGACATGTGGCCACGCCTaGCTTTTGTGTGTGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TGMSNYVADSSLWLLTSWTCGHA*LLCVLR Trigger: CCTCAACACACACAAAAGCCAGGCGTGGCCACATGT...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCGACTTCAAGGATAGCTaGTCCCATTTCACAAACATT | + |
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Preference number: 2 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLDFKDS*SHFTNI Trigger: AATGTTTGTGAAATGGGACCAGCTATCCTTGAAGTC...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTGATGATCTTGAATTCCTaGTCCTCAGAATTAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: VADSSLWLLTSWVQECLLMILNS*SSELNP Trigger: TGGGTTTAATTCTGAGGATCAGGAATTCAAGATCAT...CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATATGTATAGAGAAGCTTaGCCTCAAAGCACAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYMYREA*PQSTVC Trigger: ACATACTGTGCTTTGAGGGCAAGCTTCTCTATACAT...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATTTAAACCCAAGGCCTTaGACATATATGCTAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYLNPRP*TYMLDN Trigger: ATTGTCTAGCATATATGTGCAAGGCCTTGGGTTTAA...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGTTTCTTTTGTTGTTTTaGGGCAGTCCCATGCATTCC | + |
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Preference number: 2 (lower is better) Translates to: TGMSNYVADSSLWLLTSWFLLLF*GSPMHS Trigger: GGAATGCATGGGACTGCCTCAAAACAACAAAAGAAA...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGGGCCAGTATAGTGTACTGGTGAGTTTTAGGCCAGCCAGGGCTACACACATGATGTCAAAAGTTTaGTATGCCTTCAAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: VQGQYSVLVSFRPARATHMMSKV*YAFKYS Trigger: AGAGTACTTGAAGGCATACCAAACTTTTGACATCAT...GTGTGTAGCCCTGGCTGGCCTAAAACTCACCAGTACACTATACTGGCCCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTATCCAGGCCCCAGCTTTaGACTTTGAATAGAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLSRPQL*TLNRVG Trigger: TCCAACTCTATTCAAAGTCCAAAGCTGGGGCCTGGA...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGACAATGGTGTATCATaGTGTCAAAAGTTTGGTATG | + |
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Preference number: 2 (lower is better) Translates to: MGPPASVSQMLRICYYTEDNGVS*CQKFGM Trigger: CATACCAAACTTTTGACATCATGATACACCATTGTC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CAA 90 bp | TTATTGGTTTTAAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTaGAGGCAGTCCCATGCATTCCTGGCTGGTCTTGAATCCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLVLNRVSANVSFVV*RQSHAFLAGLESLC Trigger: ACACAGGGATTCAAGACCAGCCAGGAATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTTAAAACCAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTAGTCACAGGGGAAAATaGCACTTAGGCATTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: KSSFSKRFFCCFEAVPCISHRGK*HLGIVT Trigger: TGTGACAATGCCTAAGTGTCATTTTCCCCTGTGACT...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR-3UTR TCA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTCCCAGCTTTGGACTTTaGATAGAGTTGGAAGCGTTA | + |
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Preference number: 2 (lower is better) Translates to: KSSFSKRFFCCFEAVPCIPSFGL*IELEAL Trigger: TAACGCTTCCAACTCTATTCAAAGTCCAAAGCTGGG...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR GCA 72 bp | GCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTaGCTCTGCCTCAAGGCAGCTCTGGGACAGTCACAG | + |
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Preference number: 3 (lower is better) Translates to: ACPQSTVCPLLL*LCLKAALGQSQ Trigger: CTGTGACTGTCCCAGAGCTGCCTTGAGGCAGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | GAGTCAAAACAGGTGGGCCAGGCAGCATCTGTAGTTTaGGGCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ESKQVGQAASVV*GPKEGVGLVQG Trigger: ACCCTGAACAAGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
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| 3UTR-3UTR CAA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCCATTCCTGGCTGGTCTaGAATCCCTGTGTAGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLHSWLV*NPCVAE Trigger: TTCAGCTACACAGGGATTCAAGACCAGCCAGGAATG...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | GGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATaGGCTGGTCATTCCCCACGATCACCTCGTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: GRGRACSGFRFP*AGHSPRSPRSF Trigger: GAATGAACGAGGTGATCGTGGGGAATGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
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| 3UTR TCA 72 bp | AAGGCACATGTGGCCACGCCTGGCTTTTGTGTGTGTTaGGGATTCAGACTCAGGTCCTCATGCCTGTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: KAHVATPGFCVC*GFRLRSSCLCS Trigger: GCTACACAGGCATGAGGACCTGAGTCTGAATCCTCAACACACACAAAAGCCAGGCGTGGCCACATGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | GCCTCAAGGCAGCTCTGGGACAGTCACAGGGGAAAATaGCACTTAGGCATTGTCACAATGTCACTGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: ASRQLWDSHRGK*HLGIVTMSLQH Trigger: GTGCTGCAGTGACATTGTGACAATGCCTAAGTGTCATTTTCCCCTGTGACTGTCCCAGAGCTGCCTTGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | CGCAGGGCCATCTCTCCAGGCCCCAGCTTTGGACTTTaGATAGAGTTGGAAGCGTTAAAGATTATGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RRAISPGPSFGL*IELEALKIMGL Trigger: CAGCCCCATAATCTTTAACGCTTCCAACTCTATTCAAAGTCCAAAGCTGGGGCCTGGAGAGATGGCCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR CCA 72 bp | TCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTaGGTCCTCCTGCTCGGAAGTTCTGCTGTACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SLYSNAGSGEQP*VLLLGSSAVLR Trigger: TCTCAGTACAGCAGAACTTCCGAGCAGGAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | TGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTaGCGTCCTGGGTACAGGAGTGCCTACTGTGCTACT | + |
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Preference number: 3 (lower is better) Translates to: CLTMLQILPSGS*RPGYRSAYCAT Trigger: AGTAGCACAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| 3UTR TCA 72 bp | TGTGTGAGTGAGTTCAGGGCCAGTATAGTGTACTGGTaGGTTTTAGGCCAGCCAGGGCTACACACCAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVSEFRASIVYW*VLGQPGLHTNL Trigger: GAGATTGGTGTGTAGCCCTGGCTGGCCTAAAACTCACCAGTACACTATACTGGCCCTGAACTCACTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTaGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TGMSNYVADSSL*LLTSWVQECLL Trigger: CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR TCA 72 bp | GGTAGTACAGTACGATTGGGGCAGTTGAAGGATTGCTaGACCCAGGACTTCAAGGATAGCTGGTCCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSTVRLGQLKDC*TQDFKDSWSHF Trigger: GAAATGGGACCAGCTATCCTTGAAGTCCTGGGTTCAGCAATCCTTCAACTGCCCCAATCGTACTGTACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR TCA 72 bp | GAGTGTGGTGTGGTAGTACAGTACGATTGGGGCAGTTaGAGGATTGCTGAACCCAGGACTTCAAGGATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ECGVVVQYDWGS*RIAEPRTSRIA Trigger: AGCTATCCTTGAAGTCCTGGGTTCAGCAATCCTTCAACTGCCCCAATCGTACTGTACTACCACACCACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | AATGTCACTGCAGCACTGGGAAGGGCTCACTACTGTTaGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: NVTAALGRAHYC*TLRKSSQQFLT Trigger: TGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGAGCCCTTCCCAGTGCTGCAGTGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | TCCAATACTGCAGTTAAAGGCACATGTGGCCACGCCTaGCTTTTGTGTGTGTTGAGGATTCAGACTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNTAVKGTCGHA*LLCVLRIQTQV Trigger: GACCTGAGTCTGAATCCTCAACACACACAAAAGCCAGGCGTGGCCACATGTGCCTTTAACTGCAGTATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | TCTCAACCGCAGGGCCATCTCTCCAGGCCCCAGCTTTaGACTTTGAATAGAGTTGGAAGCGTTAAAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQPQGHLSRPQL*TLNRVGSVKDY Trigger: ATAATCTTTAACGCTTCCAACTCTATTCAAAGTCCAAAGCTGGGGCCTGGAGAGATGGCCCTGCGGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | GAACAGACGGTTTTCTCCAGTGACTTGTTACGAGTGTaGTGTGGTAGTACAGTACGATTGGGGCAGTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQTVFSSDLLRV*CGSTVRLGQLK Trigger: CTTCAACTGCCCCAATCGTACTGTACTACCACACCACACTCGTAACAAGTCACTGGAGAAAACCGTCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGAAGGGCTCACTACTGTaGGACCCTAAGGAAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MGPPASVSQMLRICYYTEKGSLL*DPKEEF Trigger: GAACTCTTCCTTAGGGTCCAACAGTAGTGAGCCCTT...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR GCA 72 bp | CCAGCTTGGGTTAAAGTCAAAATGTATAGAGAAGCTTaGCCTCAAAGCACAGTATGTCCACTCCTCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PAWVKVKMYREA*PQSTVCPLLLC Trigger: GCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACATTTTGACTTTAACCCAAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | CCCATGCTAGGCTTAAATTTGAAATCCTATTCCCTCTaGCTCCTGAAGTCCTGGGGTACAGGAATGTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PMLGLNLKSYSL*LLKSWGTGMSN Trigger: GTTAGACATTCCTGTACCCCAGGACTTCAGGAGCCAGAGGGAATAGGATTTCAAATTTAAGCCTAGCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTATGGCTTTTGTGTGTGTaGAGGATTCAGACTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLWLLCV*RIQTQV Trigger: GACCTGAGTCTGAATCCTCAACACACACAAAAGCCA...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | GCCAGACTGGGTTACATAGCAAGTACTAGGCCAGCTTaGGTTAAAGTCAAAATGTATAGAGAAGCTTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ARLGYIASTRPA*VKVKMYREACP Trigger: AGGGCAAGCTTCTCTATACATTTTGACTTTAACCCAAGCTGGCCTAGTACTTGCTATGTAACCCAGTCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | TTTGATCTTATTCTTTGGACACAGTGTAGCCCAGGTTaGCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FDLILWTQCSPG*LLNMGPPASVS Trigger: AGAGACAGAGGCAGGAGGACCCATATTTAGAAGCCAACCTGGGCTACACTGTGTCCAAAGAATAAGATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGCCCTCATCATGGACTTaGTACTTTTACTTTCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TGMSNYVADSSLWLLTSWPSSWT*YFYFQV Trigger: AACTTGAAAGTAAAAGTACAAAGTCCATGATGAGGG...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR TCA 72 bp | TCAAGGATAGCTGGTCCCATTTCACAAACATTCAACTaGACTCCCTTCACAAATTCAGCCCAATGGGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SRIAGPISQTFN*TPFTNSAQWEL Trigger: TAACTCCCATTGGGCTGAATTTGTGAAGGGAGTTCAGTTGAATGTTTGTGAAATGGGACCAGCTATCCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CCA 72 bp | AATTTGAAATCCTATTCCCTCTGGCTCCTGAAGTCCTaGGGTACAGGAATGTCTAACTATGTTGCAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: NLKSYSLWLLKS*GTGMSNYVADS Trigger: AGAATCTGCAACATAGTTAGACATTCCTGTACCCCAGGACTTCAGGAGCCAGAGGGAATAGGATTTCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR GCA 72 bp | ATGACAATGGTGTATCATGATGTCAAAAGTTTGGTATaGCTTCAAGTACTCTGCCAGGGATGGTACTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: MTMVYHDVKSLV*LQVLCQGWYCV Trigger: TACACAGTACCATCCCTGGCAGAGTACTTGAAGGCATACCAAACTTTTGACATCATGATACACCATTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR TCA 72 bp | CCCAGCTGTGTAGTCTTTGAGTGTGAACTTTGTAGATaGCAATGGTGTATCATGATGTCAAAAGTTTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PSCVVFECELCR*QWCIMMSKVWY Trigger: ATACCAAACTTTTGACATCATGATACACCATTGTCATCTACAAAGTTCACACTCAAAGACTACACAGCTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR TCA 72 bp | TTGAGTGTGAACTTTGTAGATGACAATGGTGTATCATaGTGTCAAAAGTTTGGTATGCCTTCAAGTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSVNFVDDNGVS*CQKFGMPSSTL Trigger: CAGAGTACTTGAAGGCATACCAAACTTTTGACATCATGATACACCATTGTCATCTACAAAGTTCACACTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRACCPLQ*SHAAPL Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCAGATGACACTGCCGTaGATGCTGCTCCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAQMTLP*MLLPSS Trigger: GGAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGTGTATCTGGCCCGATaGGGCTATCAGCTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAVYLAR*GYQLQS Trigger: TGATTGGAGCTGATAGCCTCATCGGGCCAGATACAC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCCCGTCTCGATCACTaGGTTGTTGCAGATGACACT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAARLDH*VVADDT Trigger: AGTGTCATCTGCAACAACGCAGTGATCGAGACGGGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTGGGGACCTGTCTGTTaGCTTCCATGTAGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAWGPVC*LPCRVP Trigger: TGGGACTCTACATGGAAGCCAACAGACAGGTCCCCA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRCCPLQ*SHAAPL Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCAGAGGCTTGGGAATaGTGGAAGTCAAGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAAEAWE*WKSSLS Trigger: TGACAGACTTGACTTCCAGCATTCCCAAGCCTCTGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGAGGCTTGGGAATGCTaGAAGTCAAGTCTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAEAWEC*KSSLSS Trigger: GGATGACAGACTTGACTTCCAGCATTCCCAAGCCTC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCTTCATCTTCATCTTaGATTCTGCGCAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAASSSS*ILRREP Trigger: AGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGTGTATCTGGCCCGATaGGGCTATCAGCTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRVYLAR*GYQLQS Trigger: TGATTGGAGCTGATAGCCTCATCGGGCCAGATACAC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTCGTATGACACAGGATaGGCCAATGACAGAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRASYDTG*ANDRVL Trigger: AAGCACTCTGTCATTGGCTCATCCTGTGTCATACGA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTTGGCTTCAATCCTCTaGCCACTTCCAACCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRALASIL*PLPTKQ Trigger: CTGTTTGGTTGGAAGTGGTCAGAGGATTGAAGCCAA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTGTAGAGTCCCAGTGTaGTTACTCGAGAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRACRVPV*LLESKV Trigger: GACTTTGCTCTCGAGTAAGCACACTGGGACTCTACA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCGCAGAGAGCCTTTTaGACATCTTTGGTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAAQRAF*TSLVVT Trigger: GGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTGGGGACCTGTCTGTTaGCTTCCATGTAGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRWGPVC*LPCRVP Trigger: TGGGACTCTACATGGAAGCCAACAGACAGGTCCCCA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTAAAGTCCTTCTTTCATaGTGTGGACATAGCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAKVLLS*CGHSSG Trigger: TCCGCTGCTATGTCCACATCATGAAAGAAGGACTTT...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCAGAGGCTTGGGAATaGTGGAAGTCAAGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRAEAWE*WKSSLS Trigger: TGACAGACTTGACTTCCAGCATTCCCAAGCCTCTGC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCATGCAGTCCCCATGTCTaGCTCATCAGGAATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSCSPHV*LIRNAH Trigger: GTGTGCATTCCTGATGAGGCAGACATGGGGACTGCA...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCTGGAACTGGTTCTATaGTCTCTTGTCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRALELVL*SLVLSS Trigger: TGAGGAAAGGACAAGAGAGCATAGAACCAGTTCCAG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCTGGAAGCAGAGGCTTaGGAATGCTGGAAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRLEAEA*ECWKSS Trigger: ACTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCTTTCCTCATTAGCATaGCCAGTGACGCATCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRALSSLA*PVTHHK Trigger: CTTATGATGCGTCACTGGCCATGCTAATGAGGAAAG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTTTCCCCTTTTGACCTaGAACTGGTTCTATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAFPLLT*NWFYAL Trigger: GAGAGCATAGAACCAGTTCCAGGTCAAAAGGGGAAA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGAACAGATAGCAATTTaGGGACCTGTCTGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAEQIAI*GPVCWL Trigger: AAGCCAACAGACAGGTCCCCAAATTGCTATCTGTTC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCAGATTTCCATGAGCTaGTCATTCCCCACGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRQISMS*SFPTIT Trigger: GGTGATCGTGGGGAATGACCAGCTCATGGAAATCTG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGACGCATCATAAGCTCTaGACAGGTCCACAACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRTHHKL*TGPQPH Trigger: ATGAGGTTGTGGACCTGTTCAGAGCTTATGATGCGT...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCACGCATCATAAGCTCTaGACAGGTCCACAACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLTHHKL*TGPQPH Trigger: ATGAGGTTGTGGACCTGTTCAGAGCTTATGATGCGT...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCAATCAGGTGTTTGTTaGCAATCTGGGCTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAQSGVC*QSGLMN Trigger: ATTCATCAGCCCAGATTGTCAACAAACACCTGATTG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTCGTATGACACAGGATaGGCCAATGACAGAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRSYDTG*ANDRVL Trigger: AAGCACTCTGTCATTGGCTCATCCTGTGTCATACGA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGATCCTAGGGTGCTTCTaGAGGATGGATCCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRILGCF*RMDPLM Trigger: CATTAAGGGATCCATCCTGCAGAAGCACCCTAGGAT...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTGCCTCAAGGCATTGTCTTCCTGCCTTTaGTGTGAGGAAGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACPQSTVCPLLLCLCLKALSSCL*CEEAEE Trigger: TTCCTCAGCTTCCTCACAGCAAAGGCAGGAAGACAA...TGCCTTGAGGCAGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTTGTCTTCCTGCCTTTaGTGTGAGGAAGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRLSSCL*CEEAEE Trigger: TTCCTCAGCTTCCTCACAGCAAAGGCAGGAAGACAA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTGTAGAGTCCCAGTGTaGTTACTCGAGAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRCRVPV*LLESKV Trigger: GACTTTGCTCTCGAGTAAGCACACTGGGACTCTACA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAGAGGCTTGGGAATGCTaGAAGTCAAGTCTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSEAWEC*KSSLSS Trigger: GGATGACAGACTTGACTTCCAGCATTCCCAAGCCTC...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCGCAGAGAGCCTTTTaGACATCTTTGGTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRAQRAF*TSLVVT Trigger: GGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCGCGCAGAGAGCCTTTTaGACATCTTTGGTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLAQRAF*TSLVVT Trigger: GGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGC...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CAA 72 bp | CCGCAGGGCCATCTCTCCAGGCCCCAGCTTTGGACTTaGAATAGAGTTGGAAGCGTTAAAGATTATGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGHLSRPQLWT*NRVGSVKDYGA Trigger: AGCCCCATAATCTTTAACGCTTCCAACTCTATTCAAAGTCCAAAGCTGGGGCCTGGAGAGATGGCCCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAGCTTCATCTTCATCTTaGATTCTGCGCAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSASSSS*ILRREP Trigger: AGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGC...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR TCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGTGCTGTCCACTCCAATaGAGTCACGCTGCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TGMSNYVADSSLWLLTSWCCPLQ*SHAAPL Trigger: CAGTGGAGCAGCGTGACTTCATTGGAGTGGACAGCA...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCTCTTCATCCAAGTCTaGTTCATTAGCCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRALFIQV*FISHKE Trigger: CTCTTTATGGCTAATGAAGCAGACTTGGATGAAGAG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCATTGTCTTCCTGCCTTTaGTGTGAGGAAGCTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSLSSCL*CEEAEE Trigger: TTCCTCAGCTTCCTCACAGCAAAGGCAGGAAGACAA...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTCTTCTTTGTCTTCCTaGCTTTGCTGTGAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRSSLSS*LCCEEA Trigger: AGCTTCCTCACAGCAAAGGCAGGAAGACAAAGAAGA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGAGCCAATGACAGAGTaGTTAATAGATGACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGGPGSICSLRPKGRGRAEPMTE*LIDDFS Trigger: AGAGAAGTCATCTATTAAGCACTCTGTCATTGGCTC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGAGGTTTGTTTCCAACTaGAAGCAGAGGCTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRRFVSN*KQRLGN Trigger: ATTCCCAAGCCTCTGCTTCCAGTTGGAAACAAACCT...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | GTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTGCTTTTGACCTGGAACTaGTTCTATGCTCTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VADSSLWLLTSWVQECLLLLTWN*FYALLS Trigger: GGACAAGAGAGCATAGAACCAGTTCCAGGTCAAAAG...CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCTTTTGACCTGGAACTaGTTCTATGCTCTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRLLTWN*FYALLS Trigger: GGACAAGAGAGCATAGAACCAGTTCCAGGTCAAAAG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGTTTCCCCTTTTGACCTaGAACTGGTTCTATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRFPLLT*NWFYAL Trigger: GAGAGCATAGAACCAGTTCCAGGTCAAAAGGGGAAA...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAAAAGTCCTTCTTTCATaGTGTGGACATAGCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSKVLLS*CGHSSG Trigger: TCCGCTGCTATGTCCACATCATGAAAGAAGGACTTT...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR TCA 90 bp | GCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTGCCTCAAGGCACAATCAGGTGTTTGTTaGCAATCTGGGCTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACPQSTVCPLLLCLCLKAQSGVC*QSGLMN Trigger: ATTCATCAGCCCAGATTGTCAACAAACACCTGATTG...TGCCTTGAGGCAGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCAATCAGGTGTTTGTTaGCAATCTGGGCTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRQSGVC*QSGLMN Trigger: ATTCATCAGCCCAGATTGTCAACAAACACCTGATTG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR TCA 90 bp | TGTATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTGTGTATCTGGCCCGATaGGGCTATCAGCTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: CIEKLALKAQYVHSSCASVYLAR*GYQLQS Trigger: TGATTGGAGCTGATAGCCTCATCGGGCCAGATACAC...AGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCACTTTTGACCTGGAACTaGTTCTATGCTCTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSLLTWN*FYALLS Trigger: GGACAAGAGAGCATAGAACCAGTTCCAGGTCAAAAG...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATTTTCCCCTTTTGACCTaGAACTGGTTCTATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYFPLLT*NWFYAL Trigger: GAGAGCATAGAACCAGTTCCAGGTCAAAAGGGGAAA...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGTGGGGACCTGTCTGTTaGCTTCCATGTAGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGMSNYVADSSLWLLTSWWGPVC*LPCRVP Trigger: TGGGACTCTACATGGAAGCCAACAGACAGGTCCCCA...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAGAACAGATAGCAATTTaGGGACCTGTCTGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQRKGSGLFRVQISMSWSEQIAI*GPVCWL Trigger: AAGCCAACAGACAGGTCCCCAAATTGCTATCTGTTC...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR GCA 90 bp | TCACTACTGTTGGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACAGGAGCACTTGCAGTCCCCATGTCTaGCTCATCAGGAATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLDPKEEFSAVSHRSTCSPHV*LIRNAH Trigger: GTGTGCATTCCTGATGAGGCAGACATGGGGACTGCA...AGTGCTCCTGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCTCTTCATCCAAGTCTaGTTCATTAGCCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGRLFIQV*FISHKE Trigger: CTCTTTATGGCTAATGAAGCAGACTTGGATGAAGAG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGAGCCAATGACAGAGTaGTTAATAGATGACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGGPGSICSLRPKGRGREPMTE*LIDDFS Trigger: AGAGAAGTCATCTATTAAGCACTCTGTCATTGGCTC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CCA 90 bp | TGTATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTCTGGAAGCAGAGGCTTaGGAATGCTGGAAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CIEKLALKAQYVHSSCASLEAEA*ECWKSS Trigger: ACTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAG...AGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGCTTCATCTTCATCTTaGATTCTGCGCAGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGMSNYVADSSLWLLTSWASSSS*ILRREP Trigger: AGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGC...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGCAGAGGCTTGGGAATaGTGGAAGTCAAGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGPPASVSQMLRICYYTEAEAWE*WKSSLS Trigger: TGACAGACTTGACTTCCAGCATTCCCAAGCCTCTGC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | TCACTACTGTTGGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACAGGAGCACTTGTAGAGTCCCAGTGTaGTTACTCGAGAGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLDPKEEFSAVSHRSTCRVPV*LLESKV Trigger: GACTTTGCTCTCGAGTAAGCACACTGGGACTCTACA...AGTGCTCCTGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | TGTATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTAGGTTTGTTTCCAACTaGAAGCAGAGGCTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CIEKLALKAQYVHSSCASRFVSN*KQRLGN Trigger: ATTCCCAAGCCTCTGCTTCCAGTTGGAAACAAACCT...AGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGCTTTCCTCATTAGCATaGCCAGTGACGCATCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGMSNYVADSSLWLLTSWLSSLA*PVTHHK Trigger: CTTATGATGCGTCACTGGCCATGCTAATGAGGAAAG...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | TCACTACTGTTGGACCCTAAGGAAGAGTTCTCAGCAGTTTCTCACAGGAGCACTCTGGAACTGGTTCTATaGTCTCTTGTCCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLDPKEEFSAVSHRSTLELVL*SLVLSS Trigger: TGAGGAAAGGACAAGAGAGCATAGAACCAGTTCCAG...AGTGCTCCTGTGAGAAACTGCTGAGAACTCTTCCTTAGGGTCCAACAGTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTAATCCTAGGGTGCTTCTaGAGGATGGATCCCTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLILGCF*RMDPLM Trigger: CATTAAGGGATCCATCCTGCAGAAGCACCCTAGGAT...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGTCTTCTTTGTCTTCCTaGCTTTGCTGTGAGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGPPASVSQMLRICYYTESSLSS*LCCEEA Trigger: AGCTTCCTCACAGCAAAGGCAGGAAGACAAAGAAGA...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGAACAGATAGCAATTTaGGGACCTGTCTGTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MGPPASVSQMLRICYYTEEQIAI*GPVCWL Trigger: AAGCCAACAGACAGGTCCCCAAATTGCTATCTGTTC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACAAAGCAAACTCTTCTaGGTAGGACTGATAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLQSKLF*VGLIRL Trigger: GAGCCTTATCAGTCCTACCCAGAAGAGTTTGCTTTG...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGAGCCAATGACAGAGTaGTTAATAGATGACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGPPASVSQMLRICYYTEEPMTE*LIDDFS Trigger: AGAGAAGTCATCTATTAAGCACTCTGTCATTGGCTC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CCA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTGAGGCTTGGGAATGCTaGAAGTCAAGTCTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KSSFSKRFFCCFEAVPCIEAWEC*KSSLSS Trigger: GGATGACAGACTTGACTTCCAGCATTCCCAAGCCTC...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTTCGTATGACACAGGATaGGCCAATGACAGAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSSFSKRFFCCFEAVPCISYDTG*ANDRVL Trigger: AAGCACTCTGTCATTGGCTCATCCTGTGTCATACGA...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTCTTCATCCAAGTCTaGTTCATTAGCCATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLLFIQV*FISHKE Trigger: CTCTTTATGGCTAATGAAGCAGACTTGGATGAAGAG...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| 3UTR CAA 72 bp | TTAAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTaGAGGCAGTCCCATGCATTCCTGGCTGGTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRVSANVSFVV*RQSHAFLAGLE Trigger: TTCAAGACCAGCCAGGAATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR TCA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTAAAGTCCTTCTTTCATaGTGTGGACATAGCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSSFSKRFFCCFEAVPCIKVLLS*CGHSSG Trigger: TCCGCTGCTATGTCCACATCATGAAAGAAGGACTTT...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTCGATCACTGCGTTGTaGCAGATGACACTGCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRASITAL*QMTLPW Trigger: CCACGGCAGTGTCATCTGCAACAACGCAGTGATCGA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGTCTCGATCACTGCGTaGTTGCAGATGACACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRAVSITA*LQMTLP Trigger: CGGCAGTGTCATCTGCAACAACGCAGTGATCGAGAC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTACTGGAAGCAGAGGCTaGGGAATGCTGGAAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRATGSRG*GMLEVK Trigger: CTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAGT...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGACTGGAAGCAGAGGCTaGGGAATGCTGGAAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTGGPGSICSLRPKGRGRTGSRG*GMLEVK Trigger: CTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAGT...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTAGCTTCATCTTCATCTaGAATTCTGCGCAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRASFIFI*NSAQRA Trigger: GGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCT...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCTCCAATCAGGTGTTaGTTGACAATCTGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRAAPIRC*LTIWAD Trigger: ATCAGCCCAGATTGTCAACAAACACCTGATTGGAGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTGCCTTTTGGACATCTTaGGTTGTAACCACGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRAAFWTS*VVTTMT Trigger: AGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGC...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCCAATCAGGTGTTTGTaGACAATCTGGGCTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRAPIRCL*TIWADE Trigger: TTCATCAGCCCAGATTGTCAACAAACACCTGATTGG...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS GCA 90 bp | ACTTCCAACCAAACAGTTCTTGATCTCTGCGCCCGTCTCGATCACTaGGTTGTTGCAGATGACACTGCCGTGGATGCTGCTCCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSNQTVLDLCARLDH*VVADDTAVDAAPFF Trigger: GAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGTTGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS GCA 90 bp | GGCTTCAATCCTCTGACCACTTCCAACCAAACAGTTCTTGATCTCTaGGCCCGTCTCGATCACTGCGTTGTTGCAGATGACACTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFNPLTTSNQTVLDL*ARLDHCVVADDTAV Trigger: CACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGTTGGAAGTGGTCAGAGGATTGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTTTTAGATCCTCTTCTTaGTCTTCCTGCCTTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGGPGSICSLRPKGRGRAFRSSS*SSCLCC Trigger: ACAGCAAAGGCAGGAAGACAAAGAAGAGGATCTAAA...AGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGAGAACAGATAGCAATTaGGGGACCTGTCTGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTGGPGSICSLRPKGRGRRTDSN*GTCLLA Trigger: AGCCAACAGACAGGTCCCCAAATTGCTATCTGTTCT...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCTCCAATCAGGTGTTaGTTGACAATCTGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KTGGPGSICSLRPKGRGRAPIRC*LTIWAD Trigger: ATCAGCCCAGATTGTCAACAAACACCTGATTGGAGC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGGCCTTTTGGACATCTTaGGTTGTAACCACGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: KTGGPGSICSLRPKGRGRAFWTS*VVTTMT Trigger: AGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGC...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGGTACAGGAGTGCCTACTGGCCTTTTGGACATCTTaGGTTGTAACCACGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: VADSSLWLLTSWVQECLLAFWTS*VVTTMT Trigger: AGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGC...CAGTAGGCACTCCTGTACCCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAAGCTTCATCTTCATCTaGAATTCTGCGCAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQRKGSGLFRVQISMSWSSFIFI*NSAQRA Trigger: GGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCT...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CAA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCAAGAACAGATAGCAATTaGGGGACCTGTCTGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQRKGSGLFRVQISMSWSRTDSN*GTCLLA Trigger: AGCCAACAGACAGGTCCCCAAATTGCTATCTGTTCT...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CAA 90 bp | AAAACAGGTGGGCCAGGCAGCATCTGTAGTTTGAGGCCCAAAGGAAGGGGTCGGCTGATGAATGGATCATaGATTCCTCCGGACAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTGGPGSICSLRPKGRGRLMNGS*IPPDKE Trigger: TTCTTTGTCCGGAGGAATCAATGATCCATTCATCAG...CCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCTGGCCCACCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070610.6 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGTAGTCAGTGTTCCTAAGTGCCAGGCAGTCTCGCCGCTCTCCCTCTATTTTAGATCCTCTTCTTaGTCTTCCTGCCTTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRVVSVPKCQAVSPLSLYFRSSS*SSCLCC Trigger: ACAGCAAAGGCAGGAAGACAAAGAAGAGGATCTAAA...ATAGAGGGAGAGCGGCGAGACTGCCTGGCACTTAGGAACACTGACTACTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCACTGATGAATGGATCATaGATTCCTCCGGACAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQRKGSGLFRVQISMSWSLMNGS*IPPDKE Trigger: TTCTTTGTCCGGAGGAATCAATGATCCATTCATCAG...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CAA 90 bp | ATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACTATACTGAGGGGCTACCAGAAGCCTaGCTCAAAAAGGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGPPASVSQMLRICYYTEGLPEA*LKKAQR Trigger: CCTCTGTGCCTTTTTGAGCAAGGCTTCTGGTAGCCC...CTCAGTATAGTAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | TCGCCGCTCTCCCTCTATTCTAATGCAGGCTCTGGAGAACAGCCTTGGGTCCTCTACCAAATTAAAGGTTaGTTTCCAACTGGAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPLSLYSNAGSGEQPWVLYQIKG*FPTGSR Trigger: TCTGCTTCCAGTTGGAAACAAACCTTTAATTTGGTA...GAGGACCCAAGGCTGTTCTCCAGAGCCTGCATTAGAATAGAGGGAGAGCGGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | ACAGGAATGTCTAACTATGTTGCAGATTCTTCCCTCTGGCTCCTGACGTCCTGGAGCTTCATCTTCATCTaGAATTCTGCGCAGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGMSNYVADSSLWLLTSWSFIFI*NSAQRA Trigger: GGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCT...CCAGGACGTCAGGAGCCAGAGGGAAGAATCTGCAACATAGTTAGACATTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | TGTATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCTAGAACAGATAGCAATTaGGGGACCTGTCTGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CIEKLALKAQYVHSSCASRTDSN*GTCLLA Trigger: AGCCAACAGACAGGTCCCCAAATTGCTATCTGTTCT...AGAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS GCA 90 bp | CTTCTGCAGGATGGATCCCTTAATGACCAGCTCTTCATCCAAGTCTaGTTCATTAGCCATAAAGAGCAGCCTTTTTCCTGTGCTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQDGSLNDQLFIQV*FISHKEQPFSCAVH Trigger: GTGGACAGCACAGGAAAAAGGCTGCTCTTTATGGCTAATGAAGCAGACTTGGATGAAGAGCTGGTCATTAAGGGATCCATCCTGCAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTAACTGGAAGCAGAGGCTaGGGAATGCTGGAAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLTGSRG*GMLEVK Trigger: CTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAGT...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | GCCCAAAGGAAGGGGTCGGGCTTGTTCAGGGTTCAGATTTCCATGAGCTGGTCATACCAAATTAAAGGTTaGTTTCCAACTGGAAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQRKGSGLFRVQISMSWSYQIKG*FPTGSR Trigger: TCTGCTTCCAGTTGGAAACAAACCTTTAATTTGGTA...TGACCAGCTCATGGAAATCTGAACCCTGAACAAGCCCGACCCCTTCCTTTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070610.6 |
||
| CDS-3UTR CAA 90 bp | ATGTATAGAGAAGCTTGCCCTCAAAGCACAGTATGTCCACTCCTCCTGTGCCTCCTGATGAATGGATCATaGATTCCTCCGGACAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: MYREACPQSTVCPLLLCLLMNGS*IPPDKE Trigger: TTCTTTGTCCGGAGGAATCAATGATCCATTCATCAG...GAGGCACAGGAGGAGTGGACATACTGTGCTTTGAGGGCAAGCTTCTCTATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS TCA 90 bp | CTTGTCCTTTCCTCATTAGCATGGCCAGTGACGCATCATAAGCTCTaGACAGGTCCACAACCTCATGTAAAGCCACATCTGTTATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLSSLAWPVTHHKL*TGPQPHVKPHLLSD Trigger: ATCTGATAACAGATGTGGCTTTACATGAGGTTGTGGACCTGTTCAGAGCTTATGATGCGTCACTGGCCATGCTAATGAGGAAAGGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
||
| CDS CCA 90 bp | ATGAATGGATCATTGATTCCTCCGGACAAAGAACAGATAGCAATTTaGGGACCTGTCTGTTGGCTTCCATGTAGAGTCCCAGTGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: MNGSLIPPDKEQIAI*GPVCWLPCRVPVCL Trigger: TAAGCACACTGGGACTCTACATGGAAGCCAACAGACAGGTCCCCAAATTGCTATCTGTTCTTTGTCCGGAGGAATCAATGATCCATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
||
| CDS CCA 90 bp | CTATCAGCTCCAATCAGGTGTTTGTTGACAATCTGGGCTGATGAATaGATCATTGATTCCTCCGGACAAAGAACAGATAGCAATTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPIRCLLTIWADE*IIDSSGQRTDSNLG Trigger: CCCCAAATTGCTATCTGTTCTTTGTCCGGAGGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGGAGCTGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCTAAATATGGGTCCTCCTGCCTCTGTCTCTCAAATGCTAAGAATCTGCTACCAATCAGGTGTTTGTaGACAATCTGGGCTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASKYGSSCLCLSNAKNLLPIRCL*TIWADE Trigger: TTCATCAGCCCAGATTGTCAACAAACACCTGATTGG...TAGCAGATTCTTAGCATTTGAGAGACAGAGGCAGGAGGACCCATATTTAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS-3UTR CAA 90 bp | AAATCGAGTTTCAGCAAACGTTTCTTTTGTTGTTTTGAGGCAGTCCCATGCATTGCTCCAATCAGGTGTTaGTTGACAATCTGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSSFSKRFFCCFEAVPCIAPIRC*LTIWAD Trigger: ATCAGCCCAGATTGTCAACAAACACCTGATTGGAGC...AATGCATGGGACTGCCTCAAAACAACAAAAGAAACGTTTGCTGAAACTCGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
||
| CDS CCA 90 bp | ATATCTAGCTTCATCTTCATCTTGAATTCTGCGCAGAGAGCCTTTTaGACATCTTTGGTTGTAACCACGATGACTTCTTCAAATCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ISSFIFILNSAQRAF*TSLVVTTMTSSNPT Trigger: TGTTGGATTTGAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCTAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
||
| CDS CAA 72 bp | CAGTTCTTGATCTCTGCGCCCGTCTCGATCACTGCGTaGTTGCAGATGACACTGCCGTGGATGCTGCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QFLISAPVSITA*LQMTLPWMLLP Trigger: AGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS CAA 90 bp | ACCAAACAGTTCTTGATCTCTGCGCCCGTCTCGATCACTGCGTTGTaGCAGATGACACTGCCGTGGATGCTGCTCCCTTCTTCCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TKQFLISAPVSITAL*QMTLPWMLLPSSTV Trigger: CACCGTGGAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS CAA 90 bp | CCAACCAAACAGTTCTTGATCTCTGCGCCCGTCTCGATCACTGCGTaGTTGCAGATGACACTGCCGTGGATGCTGCTCCCTTCTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: PTKQFLISAPVSITA*LQMTLPWMLLPSST Trigger: CGTGGAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS CCA 72 bp | GTCTCGATCACTGCGTTGTTGCAGATGACACTGCCGTaGATGCTGCTCCCTTCTTCCACGGTGACAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSITALLQMTLP*MLLPSSTVTEF Trigger: GAACTCTGTCACCGTGGAAGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS CAA 72 bp | TTCTTGATCTCTGCGCCCGTCTCGATCACTGCGTTGTaGCAGATGACACTGCCGTGGATGCTGCTCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLISAPVSITAL*QMTLPWMLLPS Trigger: AGAAGGGAGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS GCA 72 bp | CAAACAGTTCTTGATCTCTGCGCCCGTCTCGATCACTaGGTTGTTGCAGATGACACTGCCGTGGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QTVLDLCARLDH*VVADDTAVDAA Trigger: AGCAGCATCCACGGCAGTGTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS GCA 72 bp | CCTCTGACCACTTCCAACCAAACAGTTCTTGATCTCTaGGCCCGTCTCGATCACTGCGTTGTTGCAGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLTTSNQTVLDL*ARLDHCVVADD Trigger: GTCATCTGCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGTTGGAAGTGGTCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
||
| CDS CCA 72 bp | CCCTTCCCTTCCTTCCTGTCCCAAAGCAAACTCTTCTaGGTAGGACTGATAAGGCTCCTAGGGCTACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PFPSFLSQSKLF*VGLIRLLGLPE Trigger: TTCTGGTAGCCCTAGGAGCCTTATCAGTCCTACCCAGAAGAGTTTGCTTTGGGACAGGAAGGAAGGGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106447.9 |
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| CDS TCA 72 bp | CTTCAATCCTCTGACCACTTCCAACCAAACAGTTCTTaGTCTCTGCGCCCGTCTCGATCACTGCGTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LQSSDHFQPNSS*SLRPSRSLRCC Trigger: GCAACAACGCAGTGATCGAGACGGGCGCAGAGATCAAGAACTGTTTGGTTGGAAGTGGTCAGAGGATTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
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| CDS CAA 72 bp | CGCTCAAGCAGGTTCAGCGGGTACCAAATTAAAGGTTaGTTTCCAACTGGAAGCAGAGGCTTGGGAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSSRFSGYQIKG*FPTGSRGLGML Trigger: CAGCATTCCCAAGCCTCTGCTTCCAGTTGGAAACAAACCTTTAATTTGGTACCCGCTGAACCTGCTTGAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS TCA 72 bp | TCCTCATTAGCATGGCCAGTGACGCATCATAAGCTCTaGACAGGTCCACAACCTCATGTAAAGCCACATCTG | + |
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Preference number: 6 (lower is better) Translates to: SSLAWPVTHHKL*TGPQPHVKPHL Trigger: CAGATGTGGCTTTACATGAGGTTGTGGACCTGTTCAGAGCTTATGATGCGTCACTGGCCATGCTAATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 72 bp | GGCCCGATGAGGCTATCAGCTCCAATCAGGTGTTTGTaGACAATCTGGGCTGATGAATGGATCATTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: GPMRLSAPIRCL*TIWADEWIIDS Trigger: GGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGGAGCTGATAGCCTCATCGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 90 bp | AATCCAACACGCTCAAGCAGGTTCAGCGGGTACCAAATTAAAGGTTaGTTTCCAACTGGAAGCAGAGGCTTGGGAATGCTGGAAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NPTRSSRFSGYQIKG*FPTGSRGLGMLEVK Trigger: CTTGACTTCCAGCATTCCCAAGCCTCTGCTTCCAGTTGGAAACAAACCTTTAATTTGGTACCCGCTGAACCTGCTTGAGCGTGTTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 90 bp | TGTGTATCTGGCCCGATGAGGCTATCAGCTCCAATCAGGTGTTTGTaGACAATCTGGGCTGATGAATGGATCATTGATTCCTCCGGACAA | + |
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Preference number: 6 (lower is better) Translates to: CVSGPMRLSAPIRCL*TIWADEWIIDSSGQ Trigger: TTGTCCGGAGGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGGAGCTGATAGCCTCATCGGGCCAGATACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 90 bp | ATTTGTGTATCTGGCCCGATGAGGCTATCAGCTCCAATCAGGTGTTaGTTGACAATCTGGGCTGATGAATGGATCATTGATTCCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: ICVSGPMRLSAPIRC*LTIWADEWIIDSSG Trigger: TCCGGAGGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGGAGCTGATAGCCTCATCGGGCCAGATACACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 72 bp | TCTGGCCCGATGAGGCTATCAGCTCCAATCAGGTGTTaGTTGACAATCTGGGCTGATGAATGGATCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: SGPMRLSAPIRC*LTIWADEWIID Trigger: ATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGGAGCTGATAGCCTCATCGGGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS TCA 72 bp | ACCTCGTTCATTCGTTTAGCTTTGGCTTCAATCCTCTaGCCACTTCCAACCAAACAGTTCTTGATCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: TSFIRLALASIL*PLPTKQFLISA Trigger: CGCAGAGATCAAGAACTGTTTGGTTGGAAGTGGTCAGAGGATTGAAGCCAAAGCTAAACGAATGAACGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106448.9 |
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| CDS CCA 72 bp | CCAATCAGGTGTTTGTTGACAATCTGGGCTGATGAATaGATCATTGATTCCTCCGGACAAAGAACAGATAGC | + |
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Preference number: 6 (lower is better) Translates to: PIRCLLTIWADE*IIDSSGQRTDS Trigger: GCTATCTGTTCTTTGTCCGGAGGAATCAATGATCCATTCATCAGCCCAGATTGTCAACAAACACCTGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 90 bp | TTCATCTTCATCTTGAATTCTGCGCAGAGAGCCTTTTGGACATCTTaGGTTGTAACCACGATGACTTCTTCAAATCCAACACGCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FIFILNSAQRAFWTS*VVTTMTSSNPTRSS Trigger: GCTTGAGCGTGTTGGATTTGAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 90 bp | TCTGCCTCATCAGGAATGCACACAATATCTAGCTTCATCTTCATCTaGAATTCTGCGCAGAGAGCCTTTTGGACATCTTTGGTTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: SASSGMHTISSFIFI*NSAQRAFWTSLVVT Trigger: GGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCTAGATATTGTGTGCATTCCTGATGAGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS TCA 72 bp | CAGGAATGCACACAATATCTAGCTTCATCTTCATCTTaGATTCTGCGCAGAGAGCCTTTTGGACATCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QECTQYLASSSS*ILRREPFGHLW Trigger: CCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCTAGATATTGTGTGCATTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 72 bp | CTTCATCTTCATCTTGAATTCTGCGCAGAGAGCCTTTaGGACATCTTTGGTTGTAACCACGATGACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHLHLEFCAESL*DIFGCNHDDFF Trigger: GAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CCA 72 bp | TTCATCTTCATCTTGAATTCTGCGCAGAGAGCCTTTTaGACATCTTTGGTTGTAACCACGATGACTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FIFILNSAQRAF*TSLVVTTMTSS Trigger: TGAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 72 bp | ATCTTGAATTCTGCGCAGAGAGCCTTTTGGACATCTTaGGTTGTAACCACGATGACTTCTTCAAATCCAACA | + |
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Preference number: 6 (lower is better) Translates to: ILNSAQRAFWTS*VVTTMTSSNPT Trigger: TGTTGGATTTGAAGAAGTCATCGTGGTTACAACCAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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| CDS CAA 72 bp | TCAGGAATGCACACAATATCTAGCTTCATCTTCATCTaGAATTCTGCGCAGAGAGCCTTTTGGACATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SGMHTISSFIFI*NSAQRAFWTSL Trigger: CAAAGATGTCCAAAAGGCTCTCTGCGCAGAATTCAAGATGAAGATGAAGCTAGATATTGTGTGCATTCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070610.6 ENSMUST00000106447.9 ENSMUST00000106448.9 |
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