Pregenerated sensors for EIF2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029388Ensembl transcript IDs: ENSMUST00000031334.15, ENSMUST00000128920.2, ENSMUST00000135163.2, ENSMUST00000135361.8, ENSMUST00000198318.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCATTTTCTATAGACAACATTCTGTGCGCAGTGGCACATGAATaGCTCCTGCATTGGTATTTCTCCTGTCTGGCTTGGGCTGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LPFSIDNILCAVAHE*LLHWYFSCLAWAAE Trigger: CTCAGCAGCCCAAGCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTGCCACTGCGCACAGAATGTTGTCTATAGAAAATGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR-3UTR CCA 90 bp | GGTATTTCTCCTGTCTGGCTTGGGCTGCTGAGGGGAGGGAGCCCCGAAGCCAGAGCTTGCTTCCAGAACTaGAAACAGGCTTCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: GISPVWLGLLRGGSPEARACFQN*KQASDV Trigger: CACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGC...TCTGGCTTCGGGGCTCCCTCCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGCACCACAGTGACAGGGACGTTGAGGTGGGAGAGGGCTTTGGCCATTTTGAACCGTTTCTTGGCTaGCACGGCTTCTTCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: IQHHSDRDVEVGEGFGHFEPFLG*HGFFQD Trigger: GTCCTGGAAGAAGCCGTGGCAGCCAAGAAACGGTTC...AAAATGGCCAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGTGGTGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| 3UTR CAA 90 bp | GATAAATCAGGCTGCGACTCCGTGATATACACACTGAACCGTTTCTaGGCTGCCACGGCTTCTTCCAGGACTCTTAAGACAACTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DKSGCDSVIYTLNRF*AATASSRTLKTTLE Trigger: CTCCAGAGTTGTCTTAAGAGTCCTGGAAGAAGCCGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCCTGATTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCACCACAGTGACAGGGACGTTGAGGTGGGAGAGGGCTTTGGCCATTTTTCTCTTAAGACAACTCTaGAGTAGGCGTGAGTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SSTTVTGTLRWERALAIFLLRQL*SRRESK Trigger: TTTTGACTCACGCCTACTCCAGAGTTGTCTTAAGAG...AAAAATGGCCAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGTGGTGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| 3UTR CCA 72 bp | CACATGAATGGCTCCTGCATTGGTATTTCTCCTGTCTaGCTTGGGCTGCTGAGGGGAGGGAGCCCCGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: HMNGSCIGISPV*LGLLRGGSPEA Trigger: GGCTTCGGGGCTCCCTCCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR CCA 72 bp | TCCTGCCTTAGCCTCCCGTGTTCTGGGGCCACAGGCTaGGGTCAGATTGGGGTTGAGAGTATTTCAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: SCLSLPCSGATG*GQIGVESISEQ Trigger: CTGTTCTGAAATACTCTCAACCCCAATCTGACCCCAGCCTGTGGCCCCAGAACACGGGAGGCTAAGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR CCA 72 bp | ATTCTGTGCGCAGTGGCACATGAATGGCTCCTGCATTaGTATTTCTCCTGTCTGGCTTGGGCTGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: ILCAVAHEWLLH*YFSCLAWAAEG Trigger: CCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTGCCACTGCGCACAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR GCA 72 bp | ACAACATTCTGTGCGCAGTGGCACATGAATGGCTCCTaGATTGGTATTTCTCCTGTCTGGCTTGGGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: TTFCAQWHMNGS*IGISPVWLGLL Trigger: CAGCAGCCCAAGCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTGCCACTGCGCACAGAATGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR TCA 72 bp | CAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTaGCAGAGCAGAAGTCCACGGATTCTTCAGGACGTC | + |
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Preference number: 3 (lower is better) Translates to: QLASRTGNRLQM*QSRSPRILQDV Trigger: GACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR TCA 72 bp | GAAGCCAGACGTAGTCAGCCAGTGTTTGCTGTCTTGTaGGGCACCATAAGGTTTGTACTCAGCCGTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: EARRSQPVFAVL*GTIRFVLSRLS Trigger: ACTCAGACGGCTGAGTACAAACCTTATGGTGCCTCACAAGACAGCAAACACTGGCTGACTACGTCTGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR CCA 72 bp | GAAAACCATAAGGGCACCTCAGCTTGCTTCCAGAACTaGAAACAGGCTTCAGATGTGACAGAGCAGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: ENHKGTSACFQN*KQASDVTEQKS Trigger: GGACTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGTGCCCTTATGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR GCA 72 bp | CTCTACCACTCCTTCAGCACCAACTATGACAAGATCTaGTTTCTCCATGATATAGCCGACAGCAGCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: LYHSFSTNYDKI*FLHDIADSSIQ Trigger: CTGGATGCTGCTGTCGGCTATATCATGGAGAAAGCAGATCTTGTCATAGTTGGTGCTGAAGGAGTGGTAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| 3UTR CCA 72 bp | TCTATAGACAACATTCTGTGCGCAGTGGCACATGAATaGCTCCTGCATTGGTATTTCTCCTGTCTGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SIDNILCAVAHE*LLHWYFSCLAW Trigger: CCAAGCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTGCCACTGCGCACAGAATGTTGTCTATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR TCA 72 bp | ATTTTCTATAGACAACATTCTGTGCGCAGTGGCACATaGATGGCTCCTGCATTGGTATTTCTCCTGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: IFYRQHSVRSGT*MAPALVFLLSG Trigger: GCCAGACAGGAGAAATACCAATGCAGGAGCCATTCATGTGCCACTGCGCACAGAATGTTGTCTATAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | CTGGCTGGCTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATCCTCTTTGAGATCCTaGCCAGTCTGCACAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: LAGWRGEAAHPAQRVLPASSLRS*PVCTDF Trigger: GAAGTCTGTGCAGACTGGGCAGGATCTCAAAGAGGA...TGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAGCCAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCAGGCATAGGTGAGATTTaGTCTCAGGCCCTGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LAWRGCSSCTARASCMLAGIGEI*SQALEC Trigger: ACACTCCAGGGCCTGAGAGCAAATCTCACCTATGCC...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCAATCGCTTACAGCAGATaGCGTCAACACACCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LAWRGCSSCTARASCMLAIAYSR*RQHTQV Trigger: GACCTGGGTGTGTTGACGCCATCTGCTGTAAGCGAT...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCAGGTGTAGTCCACCCATaGGTGTTCCTCTTTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: LAWRGCSSCTARASCMLAGVVHP*VFLFEI Trigger: GATCTCAAAGAGGAACACCCATGGGTGGACTACACC...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCAGATCTGCTTTCTCCATaGTATAGCCGACAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LAWRGCSSCTARASCMLADLLSP*YSRQQH Trigger: ATGCTGCTGTCGGCTATATCATGGAGAAAGCAGATC...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCAAGAGGCGTACGAACTTaGAGCTTTCTGCAACCACAT | + |
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Preference number: 4 (lower is better) Translates to: LAWRGCSSCTARASCMLARGVRT*SFLQPH Trigger: ATGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCT...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | CCAGAGGCTAGTAGTATTCTAAAGACTCCGCTCATCCACTTCATCTATGTCGCCAGCTCAGGCTGCCAGTaGGGAGGCCGCGGACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: PEASSILKTPLIHFIYVASSGCQ*GGRGPC Trigger: ACACGGTCCGCGGCCTCCGCACTGGCAGCCTGAGCT...GGCGACATAGATGAAGTGGATGAGCGGAGTCTTTAGAATACTACTAGCCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135163.2 |
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| CDS-3UTR CCA 90 bp | GGTATTTCTCCTGTCTGGCTTGGGCTGCTGAGGGGAGGGAGCCCCGAAGCCAGAGCACACACGGCCATCTaGTTGGTTCCAATCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: GISPVWLGLLRGGSPEARAHTAI*LVPILL Trigger: TAACAAGATTGGAACCAACCAGATGGCCGTGTGTGC...TCTGGCTTCGGGGCTCCCTCCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATCTCTTAAGACAACTCTaGAGTAGGCGTGAGTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: WLAGVERLLILHSACFLHLLRQL*SRRESK Trigger: TTTTGACTCACGCCTACTCCAGAGTTGTCTTAAGAG...ATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAGCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| 3UTR CAA 72 bp | GGCTGCGACTCCGTGATATACACACTGAACCGTTTCTaGGCTGCCACGGCTTCTTCCAGGACTCTTAAGACA | + |
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Preference number: 4 (lower is better) Translates to: GCDSVIYTLNRF*AATASSRTLKT Trigger: TGTCTTAAGAGTCCTGGAAGAAGCCGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| CDS-3UTR TCA 90 bp | GCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGACGTCTGATGTTGGATGGCAGCCACAGCTaGGGCCATTTTAGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASDVTEQKSTDSSGRLMLDGSHS*GHFRIS Trigger: GGAGATCCTAAAATGGCCTCAGCTGTGGCTGCCATC...CAACATCAGACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | CATAAGGGCACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACAGAACCGTTTCTTGGCTaGCACGGCTTCTTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HKGTSACFQNWKQASDVTEPFLG*HGFFQD Trigger: GTCCTGGAAGAAGCCGTGGCAGCCAAGAAACGGTTC...TGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGTGCCCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | TTCCTCAGGACTGCAGATGTAATCTCAGTTGTCCTTCCTGAGACCGAGTTTCCGCCAACAAAGTCTGGATaGCAGCCACAGCTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FLRTADVISVVLPETEFPPTKSG*QPQLRP Trigger: TGGCCTCAGCTGTGGCTGCCATCCAGACTTTGTTGG...CGGAAACTCGGTCTCAGGAAGGACAACTGAGATTACATCTGCAGTCCTGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | CATAAGGGCACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACATCTGGGACGTCCTCCTaGTTGAGTGGAAAGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: HKGTSACFQNWKQASDVTSGTSS*LSGKRR Trigger: ACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGA...TGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGTGCCCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | CTAAGACCAGAGGCTAGTAGTATTCTAAAGACTCCGCTCATCCACTTCATCTATTCCCCGCCGCTCTGTTaGCACACTCACCACCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRPEASSILKTPLIHFIYSPPLC*HTHHRP Trigger: AGGACGGTGGTGAGTGTGTCAACAGAGCGGCGGGGA...ATAGATGAAGTGGATGAGCGGAGTCTTTAGAATACTACTAGCCTCTGGTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135163.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGGCTTATTCTGGGCTTTaGCACACACGGCCATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TSACFQNWKQASDVTEQKAYSGL*HTRPSG Trigger: ACCAGATGGCCGTGTGTGCCAAAGCCCAGAATAAGC...CTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | CAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAATGGGTGTTCCTCTTTaGGATCCTGCCCAGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QNWKQASDVTEQKSTDSSMGVPL*DPAQSA Trigger: TGCAGACTGGGCAGGATCTCAAAGAGGAACACCCAT...TGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | TCCGTGATATACACACTGAACCGTTTCTTGGCTGCCACGGCTTCTTCCAGGACTAATTCCAACAAAGTCTaGATGGCAGCCACAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SVIYTLNRFLAATASSRTNSNKV*MAATAE Trigger: CTCAGCTGTGGCTGCCATCCAGACTTTGTTGGAATT...AGTCCTGGAAGAAGCCGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| CDS-3UTR TCA 90 bp | TGGCAATCTTATTTCTCGACAGGGATATTCTTCTCAGGAACAGCTCTCCTCTCTGATGGCAGCCACAGCTaGGGCCATTTTAGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: WQSYFSTGIFFSGTALLSDGSHS*GHFRIS Trigger: GGAGATCCTAAAATGGCCTCAGCTGTGGCTGCCATC...AGAGAGGAGAGCTGTTCCTGAGAAGAATATCCCTGTCGAGAAATAAGATTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| CDS-3UTR CCA 90 bp | GCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGACGTCTGATGTTGAATTCCAACAAAGTCTaGATGGCAGCCACAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASDVTEQKSTDSSGRLMLNSNKV*MAATAE Trigger: CTCAGCTGTGGCTGCCATCCAGACTTTGTTGGAATT...CAACATCAGACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | GCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGACGTCTGATGTTGTTTTTATGGCATAGGTaGGATTTGCTCTCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ASDVTEQKSTDSSGRLMLFLWHR*DLLSGP Trigger: AGGGCCTGAGAGCAAATCTCACCTATGCCATAAAAA...CAACATCAGACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | GCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGACGTCTGATGTTGCTTCAGCACCAACTATaGCAAGATCTGCTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASDVTEQKSTDSSGRLMLLQHQL*QDLLSP Trigger: TGGAGAAAGCAGATCTTGTCATAGTTGGTGCTGAAG...CAACATCAGACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | TCTTATTTCTCGACAGGGATATTCTTCTCAGGAACAGCTCTCCTCTCTCAATCACCAACAAAGTCTGGATaGCAGCCACAGCTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SYFSTGIFFSGTALLSQSPTKSG*QPQLRP Trigger: TGGCCTCAGCTGTGGCTGCCATCCAGACTTTGTTGG...TGATTGAGAGAGGAGAGCTGTTCCTGAGAAGAATATCCCTGTCGAGAAATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198318.5 |
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| CDS-3UTR CCA 90 bp | ACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGTTTGCTCTCAGGCCCTaGAGTGTTTCTCCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: TSACFQNWKQASDVTEQKFALRP*SVSPLS Trigger: AGATAAAGGAGAAACACTCCAGGGCCTGAGAGCAAA...CTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | CAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGTGGGAGAGGGCTTTaGCCATTTTCTTACCAGATA | + |
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Preference number: 4 (lower is better) Translates to: QNWKQASDVTEQKSTDSSGGRGL*PFSYQI Trigger: TATCTGGTAAGAAAATGGCCAAAGCCCTCTCCCACC...TGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | GCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGACGTCTGATGTTGGAACTTGAAGCTTTCTaGAACCACATAGAAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ASDVTEQKSTDSSGRLMLELEAF*NHIEGL Trigger: AAGCCCTTCTATGTGGTTGCAGAAAGCTTCAAGTTC...CAACATCAGACGTCCTGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR TCA 90 bp | CATAAGGGCACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACACTCCTCTCTCAATCATaGTCTTCTTACATTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HKGTSACFQNWKQASDVTLLSQS*SSYIWS Trigger: ACTCCAAATGTAAGAAGATCATGATTGAGAGAGGAG...TGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGTGCCCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR GCA 90 bp | ACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGAACTATGACAAGATCTaGTTTCTCCATGATATAGCC | + |
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Preference number: 4 (lower is better) Translates to: TSACFQNWKQASDVTEQKNYDKI*FLHDIA Trigger: GGCTATATCATGGAGAAAGCAGATCTTGTCATAGTT...CTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CCA 90 bp | ACCTCAGCTTGCTTCCAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGATGTATGACACAGATTaGCAATCTTATTTCTCGACA | + |
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Preference number: 4 (lower is better) Translates to: TSACFQNWKQASDVTEQKMYDTD*QSYFST Trigger: TGTCGAGAAATAAGATTGCCAATCTGTGTCATACAT...CTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTGGAAGCAAGCTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | GGTATTTCTCCTGTCTGGCTTGGGCTGCTGAGGGGAGGGAGCCCCGAAGCCAGAACAGTGACAGGGACGTaGAGGTGGGAGAGGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GISPVWLGLLRGGSPEARTVTGT*RWERAL Trigger: CAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGT...TCTGGCTTCGGGGCTCCCTCCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | CTGGCTGGCTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCAAGGTGGGAGAGGGCTTaGGCCATTTTCTTACCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LAGWRGEAAHPAQRVLPARWERA*AIFLPD Trigger: ATCTGGTAAGAAAATGGCCAAAGCCCTCTCCCACCT...TGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAGCCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 90 bp | TGGCGTCAACACACCCAGGTCCGTAAACAGCAGGGTGATGAGGGATaGGGAGGTGTAGTCCACCCATGGGTGTTCCTCTTTGAGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: WRQHTQVRKQQGDEG*GGVVHPWVFLFEIL Trigger: CAGGATCTCAAAGAGGAACACCCATGGGTGGACTACACCTCCCCATCCCTCATCACCCTGCTGTTTACGGACCTGGGTGTGTTGACGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | GGTATTTCTCCTGTCTGGCTTGGGCTGCTGAGGGGAGGGAGCCCCGAAGCCAGAAAGAGGCGTACGAACTaGAAGCTTTCTGCAACCACA | + |
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Preference number: 5 (lower is better) Translates to: GISPVWLGLLRGGSPEARKRRTN*KLSATT Trigger: TGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTT...TCTGGCTTCGGGGCTCCCTCCCCTCAGCAGCCCAAGCCAGACAGGAGAAATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 90 bp | CGTAAACAGCAGGGTGATGAGGGATGGGGAGGTGTAGTCCACCCATaGGTGTTCCTCTTTGAGATCCTGCCCAGTCTGCACAGACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: RKQQGDEGWGGVVHP*VFLFEILPSLHRLQ Trigger: CTGAAGTCTGTGCAGACTGGGCAGGATCTCAAAGAGGAACACCCATGGGTGGACTACACCTCCCCATCCCTCATCACCCTGCTGTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCACACACGGCCATCTGGTaGGTTCCAATCTTGTTAATA | + |
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Preference number: 5 (lower is better) Translates to: LAWRGCSSCTARASCMLAHTAIW*VPILLI Trigger: TATTAACAAGATTGGAACCAACCAGATGGCCGTGTG...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | CTGGCGTGGAGAGGCTGCTCATCCTGCACAGCGCGTGCTTCCTGCATGTTGGCATGGTTGGTTCCAATCTaGTTAATAATGCCTCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LAWRGCSSCTARASCMLAWLVPI*LIMPPF Trigger: GAACGGAGGCATTATTAACAAGATTGGAACCAACCA...TGCCAACATGCAGGAAGCACGCGCTGTGCAGGATGAGCAGCCTCTCCACGCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | CAGAACTGGAAACAGGCTTCAGATGTGACAGAGCAGAAGTCCACGGATTCTTCAGGGACGTCCTCCTGGTaGAGTGGAAAGAGGCGTACG | + |
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Preference number: 5 (lower is better) Translates to: QNWKQASDVTEQKSTDSSGTSSW*SGKRRT Trigger: CGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCC...TGAAGAATCCGTGGACTTCTGCTCTGTCACATCTGAAGCCTGTTTCCAGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS GCA 90 bp | GTCCTCCTGGTTGAGTGGAAAGAGGCGTACGAACTTGAAGCTTTCTaGAACCACATAGAAGGGCTTATTCTGGGCTTTGGCACACACGGC | + |
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Preference number: 5 (lower is better) Translates to: VLLVEWKEAYELEAF*NHIEGLILGFGTHG Trigger: GCCGTGTGTGCCAAAGCCCAGAATAAGCCCTTCTATGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS GCA 90 bp | GACAGTGAGGTCCCAGTGATGCATGATGACCCAGATAAATCAGGCTaGGACTCCGTGATATACACACTGAACCGTTTCTTGGCTGCCACG | + |
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Preference number: 5 (lower is better) Translates to: DSEVPVMHDDPDKSG*DSVIYTLNRFLAAT Trigger: CGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCCTGATTTATCTGGGTCATCATGCATCACTGGGACCTCACTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135361.8 |
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| CDS TCA 90 bp | CGGCCACTGAGGAGTCCACACCACAGAGGGTTTTTATGGCATAGGTaGGATTTGCTCTCAGGCCCTGGAGTGTTTCTCCTTTATCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RPLRSPHHRGFLWHR*DLLSGPGVFLLYLS Trigger: AGAGAGATAAAGGAGAAACACTCCAGGGCCTGAGAGCAAATCTCACCTATGCCATAAAAACCCTCTGTGGTGTGGACTCCTCAGTGGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031334.15 ENSMUST00000128920.2 ENSMUST00000135361.8 |
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| CDS GCA 90 bp | AGGTGGGAGAGGGCTTTGGCCATTTTCTTACCAGATAAATCAGGCTaGGACTCCGTGATATACACACTGAACCGTTTCTTGGCTGCCACG | + |
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Preference number: 5 (lower is better) Translates to: RWERALAIFLPDKSG*DSVIYTLNRFLAAT Trigger: CGTGGCAGCCAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCCTGATTTATCTGGTAAGAAAATGGCCAAAGCCCTCTCCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 90 bp | TTCAGAGTGTCTGCCTTGTACTTAAACTTATCTGGGACGTCCTCCTaGTTGAGTGGAAAGAGGCGTACGAACTTGAAGCTTTCTGCAACC | + |
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Preference number: 5 (lower is better) Translates to: FRVSALYLNLSGTSS*LSGKRRTNLKLSAT Trigger: GGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGACACTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 90 bp | GTCTGCCTTGTACTTAAACTTATCTGGGACGTCCTCCTGGTTGAGTaGAAAGAGGCGTACGAACTTGAAGCTTTCTGCAACCACATAGAA | + |
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Preference number: 5 (lower is better) Translates to: VCLVLKLIWDVLLVE*KEAYELEAFCNHIE Trigger: TTCTATGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS-3UTR CAA 90 bp | TTCCTCAGGACTGCAGATGTAATCTCAGTTGTCCTTCCTGAGACCGAGTTTCCGTTCAGAGTGTCTGCCTaGTACTTAAACTTATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FLRTADVISVVLPETEFPFRVSA*YLNLSG Trigger: CCCAGATAAGTTTAAGTACAAGGCAGACACTCTGAA...CGGAAACTCGGTCTCAGGAAGGACAACTGAGATTACATCTGCAGTCCTGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS TCA 90 bp | ATCTCTCTTCAAGAATTCCAACAAAGTCTGGATGGCAGCCACAGCTaGGGCCATTTTAGGATCTCCTTTCATCTGAGACTTAAAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: ISLQEFQQSLDGSHS*GHFRISFHLRLKVF Trigger: GAATACTTTAAGTCTCAGATGAAAGGAGATCCTAAAATGGCCTCAGCTGTGGCTGCCATCCAGACTTTGTTGGAATTCTTGAAGAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031334.15 ENSMUST00000128920.2 ENSMUST00000135361.8 ENSMUST00000198318.5 |
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| CDS CCA 72 bp | CAGGGTGATGAGGGATGGGGAGGTGTAGTCCACCCATaGGTGTTCCTCTTTGAGATCCTGCCCAGTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QGDEGWGGVVHP*VFLFEILPSLH Trigger: GTGCAGACTGGGCAGGATCTCAAAGAGGAACACCCATGGGTGGACTACACCTCCCCATCCCTCATCACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 72 bp | CACACCCAGGTCCGTAAACAGCAGGGTGATGAGGGATaGGGAGGTGTAGTCCACCCATGGGTGTTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HTQVRKQQGDEG*GGVVHPWVFLF Trigger: AAAGAGGAACACCCATGGGTGGACTACACCTCCCCATCCCTCATCACCCTGCTGTTTACGGACCTGGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS TCA 72 bp | ATGGGGAGGTGTAGTCCACCCATGGGTGTTCCTCTTTaGGATCCTGCCCAGTCTGCACAGACTTCAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: MGRCSPPMGVPL*DPAQSAQTSEC Trigger: ACACTCTGAAGTCTGTGCAGACTGGGCAGGATCTCAAAGAGGAACACCCATGGGTGGACTACACCTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 90 bp | GCATCCAGCACCACAGTGACAGGGACGTTGAGGTGGGAGAGGGCTTaGGCCATTTTCTTACCAGATAAATCAGGCTGCGACTCCGTGATA | + |
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Preference number: 6 (lower is better) Translates to: ASSTTVTGTLRWERA*AIFLPDKSGCDSVI Trigger: TATCACGGAGTCGCAGCCTGATTTATCTGGTAAGAAAATGGCCAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGTGGTGCTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 72 bp | ACCACAGTGACAGGGACGTTGAGGTGGGAGAGGGCTTaGGCCATTTTCTTACCAGATAAATCAGGCTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: TTVTGTLRWERA*AIFLPDKSGCD Trigger: GTCGCAGCCTGATTTATCTGGTAAGAAAATGGCCAAAGCCCTCTCCCACCTCAACGTCCCTGTCACTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS GCA 72 bp | GAGATCCTGCCCAGTCTGCACAGACTTCAGAGTGTCTaGCTTGTACTTAAACTTATCTGGGACGTCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EILPSLHRLQSV*LVLKLIWDVLL Trigger: CAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGACACTCTGAAGTCTGTGCAGACTGGGCAGGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS TCA 72 bp | AGGAGTCCACACCACAGAGGGTTTTTATGGCATAGGTaGGATTTGCTCTCAGGCCCTGGAGTGTTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RSPHHRGFLWHR*DLLSGPGVFLL Trigger: AAGGAGAAACACTCCAGGGCCTGAGAGCAAATCTCACCTATGCCATAAAAACCCTCTGTGGTGTGGACTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031334.15 ENSMUST00000128920.2 ENSMUST00000135361.8 |
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| CDS GCA 72 bp | ACCCATGGGTGTTCCTCTTTGAGATCCTGCCCAGTCTaGACAGACTTCAGAGTGTCTGCCTTGTACTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: THGCSSLRSCPV*TDFRVSALYLN Trigger: GTTTAAGTACAAGGCAGACACTCTGAAGTCTGTGCAGACTGGGCAGGATCTCAAAGAGGAACACCCATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS GCA 72 bp | GTTGAGTGGAAAGAGGCGTACGAACTTGAAGCTTTCTaGAACCACATAGAAGGGCTTATTCTGGGCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VEWKEAYELEAF*NHIEGLILGFG Trigger: GCCAAAGCCCAGAATAAGCCCTTCTATGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 72 bp | AAGGGCTTATTCTGGGCTTTGGCACACACGGCCATCTaGTTGGTTCCAATCTTGTTAATAATGCCTCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: KGLFWALAHTAI*LVPILLIMPPF Trigger: GAACGGAGGCATTATTAACAAGATTGGAACCAACCAGATGGCCGTGTGTGCCAAAGCCCAGAATAAGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 72 bp | GCTTTGGCACACACGGCCATCTGGTTGGTTCCAATCTaGTTAATAATGCCTCCGTTCTCTACCACTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ALAHTAIWLVPI*LIMPPFSTTPS Trigger: TGAAGGAGTGGTAGAGAACGGAGGCATTATTAACAAGATTGGAACCAACCAGATGGCCGTGTGTGCCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 72 bp | GGCTTATTCTGGGCTTTGGCACACACGGCCATCTGGTaGGTTCCAATCTTGTTAATAATGCCTCCGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLFWALAHTAIW*VPILLIMPPFS Trigger: AGAGAACGGAGGCATTATTAACAAGATTGGAACCAACCAGATGGCCGTGTGTGCCAAAGCCCAGAATAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 90 bp | AGAGTGTCTGCCTTGTACTTAAACTTATCTGGGACGTCCTCCTGGTaGAGTGGAAAGAGGCGTACGAACTTGAAGCTTTCTGCAACCACA | + |
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Preference number: 6 (lower is better) Translates to: RVSALYLNLSGTSSW*SGKRRTNLKLSATT Trigger: TGTGGTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGACACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS GCA 72 bp | CACACCACAGAGGGTTTTTATGGCATAGGTGAGATTTaGTCTCAGGCCCTGGAGTGTTTCTCCTTTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: HTTEGFYGIGEI*SQALECFSFIS Trigger: AGAGATAAAGGAGAAACACTCCAGGGCCTGAGAGCAAATCTCACCTATGCCATAAAAACCCTCTGTGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031334.15 ENSMUST00000128920.2 ENSMUST00000135361.8 |
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| CDS CCA 72 bp | GTACTTAAACTTATCTGGGACGTCCTCCTGGTTGAGTaGAAAGAGGCGTACGAACTTGAAGCTTTCTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: VLKLIWDVLLVE*KEAYELEAFCN Trigger: GTTGCAGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CCA 72 bp | TCTGCCTTGTACTTAAACTTATCTGGGACGTCCTCCTaGTTGAGTGGAAAGAGGCGTACGAACTTGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SALYLNLSGTSS*LSGKRRTNLKL Trigger: AAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS CAA 72 bp | GCCTTGTACTTAAACTTATCTGGGACGTCCTCCTGGTaGAGTGGAAAGAGGCGTACGAACTTGAAGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ALYLNLSGTSSW*SGKRRTNLKLS Trigger: AGAAAGCTTCAAGTTCGTACGCCTCTTTCCACTCAACCAGGAGGACGTCCCAGATAAGTTTAAGTACAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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| CDS TCA 72 bp | CAAGAATTCCAACAAAGTCTGGATGGCAGCCACAGCTaGGGCCATTTTAGGATCTCCTTTCATCTGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: QEFQQSLDGSHS*GHFRISFHLRL Trigger: AAGTCTCAGATGAAAGGAGATCCTAAAATGGCCTCAGCTGTGGCTGCCATCCAGACTTTGTTGGAATTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031334.15 ENSMUST00000128920.2 ENSMUST00000135361.8 ENSMUST00000198318.5 |
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| CDS GCA 72 bp | AGGGCTTTGGCCATTTTCTTACCAGATAAATCAGGCTaGGACTCCGTGATATACACACTGAACCGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RALAIFLPDKSG*DSVIYTLNRFL Trigger: CAAGAAACGGTTCAGTGTGTATATCACGGAGTCGCAGCCTGATTTATCTGGTAAGAAAATGGCCAAAGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031334.15 |
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