Pregenerated sensors for EIF2AK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031668Ensembl transcript IDs: ENSMUST00000034093.15, ENSMUST00000162950.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCTAGACCACCTGAAGAATGACGCTATTCACTGCTGCAGACTATaGCACTACCGACATAAATGGCGACCCAGCTTGTGCTATGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SLDHLKNDAIHCCRL*HYRHKWRPSLCYVP Trigger: AGGCACATAGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAATAGCGTCATTCTTCAGGTGGTCTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR GCA 90 bp | TCTAGAACATGTAGTTCCCATGTGAGAGGGTCTTTTACACTTTTGTaGTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SRTCSSHVRGSFTLL*FKDISSSDHLRISS Trigger: AGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAAAAGTGTAAAAGACCCTCTCACATGGGAACTACATGTTCTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR TCA 90 bp | CTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTaGGAGGGTCTTTTACACTTTTGTGCTTTAAAGACATTTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LVSLESTFLEHVVPM*EGLLHFCALKTFPV Trigger: AACTGGAAATGTCTTTAAAGCACAAAAGTGTAAAAGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR-3UTR TCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACACACAGCCCTTTCCTTaGAGTTCAGTTAAGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHTQPFP*SSVKIK Trigger: TTTGATCTTAACTGAACTTCAAGGAAAGGGCTGTGT...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR-3UTR TCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTGTGAAGGTTCTAAGCTaGCCAGCTAGTCTTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LYNNHFQNHPCISRKHVSVKVLS*PASLGT Trigger: TGTCCCAAGACTAGCTGGTCAGCTTAGAACCTTCAC...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR-3UTR TCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTTCTTCTACCGCCTGGTaGAAAGTGAAGGTTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: LYNNHFQNHPCISRKHVSSSTAW*KVKVLS Trigger: GCTTAGAACCTTCACTTTTCACCAGGCGGTAGAAGA...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR GCA 72 bp | CGACATAAATGGCGACCCAGCTTGTGCTATGTGCCTTaGAAATTAGTGCAGATGGGTCACGGCTCACCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RHKWRPSLCYVP*KLVQMGHGSPG Trigger: CCCTGGTGAGCCGTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTTATGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR-3UTR CAA 90 bp | TTCACTGCTGCAGACTATGACACTACCGACATAAATGGCGACCCAGCTTGTGCTTCCAGTTCAGACCATTaGAGGATCTCTTCTACCGCC | + |
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Preference number: 3 (lower is better) Translates to: FTAADYDTTDINGDPACASSSDH*RISSTA Trigger: GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGA...AGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR-3UTR CAA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCTCTGACTTAGAAAAATaGGTCCCGAGTCCAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: FQNHPCISRKHVSRTCSSSDLEK*VPSPTD Trigger: ATCAGTTGGACTCGGGACCAATTTTTCTAAGTCAGA...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| 3UTR TCA 72 bp | AAAAAGCAAATCAGATTTCACCTCAGGAGGTCCTTCTaGAAATTTAAAACACAAGTCTTAGCTACTGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: KKQIRFHLRRSF*KFKTQVLATGC Trigger: ACAACCAGTAGCTAAGACTTGTGTTTTAAATTTTCAGAAGGACCTCCTGAGGTGAAATCTGATTTGCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS-3UTR CCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAACACCTTGGGGGAGCTaGGCTGGAGCTGGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRTPWGS*AGAGPQ Trigger: CTGTGGGCCAGCTCCAGCCCAGCTCCCCCAAGGTGT...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCGCAGCCGGTTCCCTCTaGGCTCCTCCTTACTGGACG | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAAAGSL*APPYWT Trigger: CGTCCAGTAAGGAGGAGCCCAGAGGGAACCGGCTGC...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | AATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCAACCCTGACGGACGACTaGAGGTACAGCTGGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NLSPPLWRAMFLRVPALPTLTDD*RYSWPL Trigger: CAGAGGCCAGCTGTACCTGCAGTCGTCCGTCAGGGT...TGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | AATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACATTGCCGTCCACGGTaGCATCTTCCACGTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: NLSPPLWRAMFLRVPALPHCRPR*HLPRPR Trigger: GCGAGGACGTGGAAGATGGCACCGTGGACGGCAATG...TGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCAAAGCCTGCGCACGATaGAGGTCGTGGCTACGATGC | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAKACAR*RSWLRC Trigger: GCATCGTAGCCACGACCTTCATCGTGCGCAGGCTTT...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGACTTTCAGTCTGGCACTaGGTTTCAGACTCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRLSVWH*VSDSFR Trigger: GCGGAAGGAGTCTGAAACTCAGTGCCAGACTGAAAG...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | GGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAGGGCAGCTGAGGGTGCGTAGCATAGGCTaGCATTGGAGTCAGTACAGT | + |
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Preference number: 4 (lower is better) Translates to: GEPCSSGCLLCHLRGQLRVRSIG*HWSQYS Trigger: ACTGTACTGACTCCAATGCCAGCCTATGCTACGCAC...CCTCAGCTGCCCTCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCCCGCTCCGTGGGGGATaGAGAGAGCATGTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAPLRGG*REHVLN Trigger: GTTCAAGACATGCTCTCTCCATCCCCCACGGAGCGG...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACAGCGGCAGCCGGCAATaGCTCGGCGTCCTCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHSGSRQ*LGVLHG Trigger: ACCGTGGAGGACGCCGAGGCATTGCCGGCTGCCGCT...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAGTCTTCTGCGTACGCTaGAGAAGCAAGATGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRVFCVR*RSKMSS Trigger: GGAAGACATCTTGCTTCTGCAGCGTACGCAGAAGAC...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCTTCTTGCCACTTCTCTaGTGGGGTTTCCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAFLPLL*WGFQPG Trigger: GCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAA...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAGGCTCATGTATAGCTTaGTCCCTACTTGTCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRGSCIA*SLLVPC Trigger: ACACGGGACAAGTAGGGACCAAGCTATACATGAGCC...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGACTGTGCTTTCGTCTTTaGGCCAGATCTCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRLCFRL*ARSHPS Trigger: AGATGGATGAGATCTGGCTCAAAGACGAAAGCACAG...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | GTGGTTCATTTCCTAGGGAGCATAATCTATCAAAGTTCCCAGAGTGAACCTGGTCGGGAGCAAGCAAACTaGGGGCGGGCGCGACCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VVHFLGSIIYQSSQSEPGREQAN*GRARPP Trigger: CGGCGGTCGCGCCCGCCCGCAGTTTGCTTGCTCCCG...ACCAGGTTCACTCTGGGAACTTTGATAGATTATGCTCCCTAGGAAATGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS-3UTR GCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCATGAGTCCCTTGCTGTaGAGGAACTCCACTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAMSPLL*RNSTAS Trigger: AGAGGCAGTGGAGTTCCTGCACAGCAAGGGACTCAT...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAGGAGTCAGTACAGTCTaGTCTTCTTCATCTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRGVSTV*SSSSWS Trigger: GGACCAAGATGAAGAAGAGCAGACTGTACTGACTCC...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | GGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGAGGGCAGCTGAGGTGCTCTTCTTCATCTTaGTCCATAGCAGTCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: GEPCSSGCLLCHLRGQLRCSSSS*SIAVTS Trigger: ACTGGTGACTGCTATGGACCAAGATGAAGAAGAGCA...CCTCAGCTGCCCTCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TTCACTGCTGCAGACTATGACACTACCGACATAAATGGCGACCCAGCTTGTGCTCGGTCCCGGTCCCACTaGAAGAGGTCTCCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FTAADYDTTDINGDPACARSRSH*KRSPSR Trigger: CCTGGATGGAGACCTCTTCCAGTGGGACCGGGACCG...AGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGACCACATCATCCATTGTaGAGAATATGTTGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRPHHPL*RICWKA Trigger: AGCCTTCCAACATATTCTTCACAATGGATGATGTGG...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTGGTCACTTCGGCCGTTaGCACCGCAGGCACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSGHFGR*HRRHPR Trigger: GCGCGGGTGCCTGCGGTGGCAACGGCCGAAGTGACC...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCAGACTCCAAGGCCTTTaGGCTTGTAGGGAACTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSARLQGL*ACRELF Trigger: GAAAAGTTCCCTACAAGCCCAAAGGCCTTGGAGTCT...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCGGGAGCAAGCAAACTaGGGGCGGGCGCGACCGCCG | + |
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Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSREQAN*GRARPP Trigger: CGGCGGTCGCGCCCGCCCGCAGTTTGCTTGCTCCCG...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | TTCACTGCTGCAGACTATGACACTACCGACATAAATGGCGACCCAGCTTGTGCTATCTGCAGGAAGATGTaGAGGCACACGCCGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FTAADYDTTDINGDPACAICRKM*RHTPCS Trigger: GGAGCACGGCGTGTGCCTGCACATCTTCCTGCAGAT...AGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCTGGATACTGGAGGATTaGAAGTGCACCATTACTGTA | + |
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Preference number: 4 (lower is better) Translates to: KSESTAVESHVPQGACSAWILED*KCTITV Trigger: TACAGTAATGGTGCACTTTCAATCCTCCAGTATCCA...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | CCAAAAATAGTGGTTCATTTCCTAGGGAGCATAATCTATCAAAGTTCCCAGAGTGGTCACTTCGGCCGTTaGCACCGCAGGCACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PKIVVHFLGSIIYQSSQSGHFGR*HRRHPR Trigger: GCGCGGGTGCCTGCGGTGGCAACGGCCGAAGTGACC...ACTCTGGGAACTTTGATAGATTATGCTCCCTAGGAAATGAACCACTATTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS-3UTR GCA 90 bp | TTCACTGCTGCAGACTATGACACTACCGACATAAATGGCGACCCAGCTTGTGCTTCTGGCCACAGGAAATaGCCACCGAGAAAGACCGAC | + |
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Preference number: 4 (lower is better) Translates to: FTAADYDTTDINGDPACASGHRK*PPRKTD Trigger: GTCGGTCTTTCTCGGTGGGCATTTCCTGTGGCCAGA...AGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACTCCAGGGGAGAGAACTaGCTCTCCGATGAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHSRGEN*LSDELV Trigger: GACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGA...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACGACTGCAGGTACAGCTaGCCTCTGTACATCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHDCRYS*PLYIPK Trigger: CTTAGGGATGTACAGAGGCCAGCTGTACCTGCAGTC...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTTTGGGGGAGCTGGGCTaGAGCTGGCCCACAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSLGELG*SWPTVF Trigger: GAACACTGTGGGCCAGCTCCAGCCCAGCTCCCCCAA...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACCCACGACCCATGCACTaGATTGGCTCAAAATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHPRPMH*IGSKSV Trigger: AACAGATTTTGAGCCAATTCAGTGCATGGGTCGTGG...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTTCCGCAGTCTGTCCCTaGGAACTCCAGGGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSSAVCP*ELQGRE Trigger: TTCTCTCCCCTGGAGTTCTCAGGGACAGACTGCGGA...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACCCACAGTGTTCTTGGTaGAATCCAAGCTTAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHPQCSW*NPSLEW Trigger: CCACTCTAAGCTTGGATTTCACCAAGAACACTGTGG...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCACACGCTGTTCTCTGTaGCTCCCCGAGCAGCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTATRCSL*LPEQPL Trigger: TAGAGGCTGCTCGGGGAGCCACAGAGAACAGCGTGT...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTGCCAGGCGGACGCGATaGGAGTACAAAACTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSARRTR*EYKTGT Trigger: AGTACCAGTTTTGTACTCCCATCGCGTCCGCCTGGC...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTTTGCCACTTCTCTGGTaGGGTTTCCAGCCAGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSLPLLW*GFQPGV Trigger: AACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAA...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCACTTTTCTGAGACCCTaGCGGACGACTGCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTATFLRP*RTTAGT Trigger: TGTACCTGCAGTCGTCCGTCAGGGTCTCAGAAAAGT...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCTGTAGGGAACTTTTCTaGGACCCTGACGGACGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTACRELF*DPDGRL Trigger: CAGTCGTCCGTCAGGGTCTCAGAAAAGTTCCCTACA...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCGAACTGGCTCTCCGATaGGCTTGTCTGGCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSELALR*ACLATG Trigger: TCCTGTGGCCAGACAAGCTCATCGGAGAGCCAGTTC...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTCTTCAGGCCGCTCCGTaGGGGATGGAGAGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYNNHFQNHPCISRKHVSLQAAP*GMERAC Trigger: ACATGCTCTCTCCATCCCCCACGGAGCGGCCTGAAG...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | GTTCATTTCCTAGGGAGCATAATCTATCAAAGTTCCCAGAGTGAACCTGGTTCCTTTGAGGAAGTTTTGTaGGTGCCCTCTGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHFLGSIIYQSSQSEPGSFEEVL*VPSGLL Trigger: CAGCAAGCCAGAGGGCACCCACAAAACTTCCTCAAA...GGAACCAGGTTCACTCTGGGAACTTTGATAGATTATGCTCCCTAGGAAATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS-3UTR TCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTCATCCAGGGAGGGGATaGTCATCTTGTTCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSHPGRG*SSCSQT Trigger: TGTTTGGGAACAAGATGATCATCCCCTCCCTGGATG...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCAAGGTGGTGGCTTCTaGAGAAGACCTGCTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSQGGGF*RRPAAG Trigger: TCCAGCAGCAGGTCTTCTTCAGAAGCCACCACCTTG...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCCAAAGTGGCCAACACTaGAATTCCACTTCTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTAQSGQH*NSTSHC Trigger: GCAGTGAGAAGTGGAATTTCAGTGTTGGCCACTTTG...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCGGAGAGAGCATGTCTTaGACCATCATATGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTAGESMS*TIICSW Trigger: CCAAGAGCATATGATGGTTCAAGACATGCTCTCTCC...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCAGCAGCTGGGCTGTCTaGAATGTTTTGTTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTASSWAV*NVLFQM Trigger: CATCTGGAACAAAACATTCCAGACAGCCCAGCTGCT...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | TTGTGCTTTAAAGACATTTCCAGTTCAGACCATTTGAGGATCTCTTCTACCGCCACGTCCAAATCCCACTaGTTTTTCCCATCATTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCFKDISSSDHLRISSTATSKSH*FFPSFS Trigger: CGAGAATGATGGGAAAAAGCAGTGGGATTTGGACGT...GGCGGTAGAAGAGATCCTCAAATGGTCTGAACTGGAAATGTCTTTAAAGCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCAGCATAGGCTGGCATTaGAGTCAGTACAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSSIGWH*SQYSLL Trigger: GAGCAGACTGTACTGACTCCAATGCCAGCCTATGCT...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTTCTTGGGGATATTTCTaGGTGAACAGTAGAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CISRKHVSRTCSSHVRGSSWGYF*VNSRGN Trigger: GTTTCCTCTACTGTTCACTCAGAAATATCCCCAAGA...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR TCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTATGTTTTGTTCCAGATaGACTCATGGAGCGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LYNNHFQNHPCISRKHVSMFCSR*THGAGP Trigger: CGGTCCCGCTCCATGAGTTCATCTGGAACAAAACAT...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCAGCCACCACGACCCATaGACTGAATTGGCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSSHHDP*TELAQN Trigger: ATTTTGAGCCAATTCAGTGCATGGGTCGTGGTGGCT...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCTGTGTCCAGCATGGTaGCTTCTTGTTCTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FQNHPCISRKHVSRTCSSLCPAW*LLVLPH Trigger: ATGTGGAAGAACAAGAAGCCACCATGCTGGACACAG...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTTCATCCATCTCTTCTTaGCACTTCTCTGGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYNNHFQNHPCISRKHVSSSISS*HFSGGV Trigger: AACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGA...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR GCA 90 bp | AGCAAATCAGATTTCACCTCAGGAGGTCCTTCTGAAAATTTAAAACACAAGTCTACGTCCAAATCCCACTaGTTTTTCCCATCATTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SKSDFTSGGPSENLKHKSTSKSH*FFPSFS Trigger: CGAGAATGATGGGAAAAAGCAGTGGGATTTGGACGT...AGACTTGTGTTTTAAATTTTCAGAAGGACCTCCTGAGGTGAAATCTGATTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS-3UTR CCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTTACCGAAGTTCAAAGTaGCCAACACTGAAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LYNNHFQNHPCISRKHVSYRSSK*PTLKFH Trigger: GTGGAATTTCAGTGTTGGCCACTTTGAACTTCGGTA...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CCA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTTTATCGTATGGATACTaGAGGATTGAAAGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LYNNHFQNHPCISRKHVSLSYGY*RIESAP Trigger: TGGTGCACTTTCAATCCTCCAGTATCCATACGATAA...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | GGCAGCCGGCAATGCCTCGGCGTCCTCCACGGTCACTTCGGCCGTTaGCACCGCAGGCACCCGCGCGGCCGAAGTCGGGGCGGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRQCLGVLHGHFGR*HRRHPRGRSRGGRC Trigger: GCAGCGGCCGCCCCGACTTCGGCCGCGCGGGTGCCTGCGGTGGCAACGGCCGAAGTGACCGTGGAGGACGCCGAGGCATTGCCGGCTGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034093.15 ENSMUST00000162950.2 |
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| CDS GCA 90 bp | TCCACTGCCTCTGCGATCTGCAGGAAGATGTGCAGGCACACGCCGTaGTCCCGGTCCTCCAAGCTGCAGCGCCGGTTCATCCAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: STASAICRKMCRHTP*SRSSKLQRRFIQSL Trigger: CAAAGACTGGATGAACCGGCGCTGCAGCTTGGAGGACCGGGAGCACGGCGTGTGCCTGCACATCTTCCTGCAGATCGCAGAGGCAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | TGCATGAGTCCCTTGCTGTGCAGGAACTCCACTGCCTCTGCGATCTaGAGGAAGATGTGCAGGCACACGCCGTGCTCCCGGTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CMSPLLCRNSTASAI*RKMCRHTPCSRSSK Trigger: CTTGGAGGACCGGGAGCACGGCGTGTGCCTGCACATCTTCCTGCAGATCGCAGAGGCAGTGGAGTTCCTGCACAGCAAGGGACTCATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | ACCGTGAAGGGGACGGCCTCCATGCTCTCTCGGTCCCGGTCCCACTaGAAGAGGTCTCCATCCAGGGAGGGGATGATCATCTTGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVKGTASMLSRSRSH*KRSPSREGMIILFP Trigger: TGGGAACAAGATGATCATCCCCTCCCTGGATGGAGACCTCTTCCAGTGGGACCGGGACCGAGAGAGCATGGAGGCCGTCCCCTTCACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CAA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCCGTGCCAACTCCCTGTaGGGGAGCCGGATCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSESTAVESHVPQGACSARANSL*GSRILL Trigger: CAAGAGGATCCGGCTCCCCAACAGGGAGTTGGCACG...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 90 bp | CATCATCTCCAAACTTGTAGGAAGATTCGAGCAGGGACTCCACCGTaGAGGGGACGGCCTCCATGCTCTCTCGGTCCCGGTCCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHLQTCRKIRAGTPP*RGRPPCSLGPGPTG Trigger: TCCAGTGGGACCGGGACCGAGAGAGCATGGAGGCCGTCCCCTTCACGGTGGAGTCCCTGCTCGAATCTTCCTACAAGTTTGGAGATGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | GAGAAGCTTCGGACGGACAAAGTTCAAAGGAGTGTCCCTCGTCATTaGCGTCCACGGTGCCATCTTCCACGTCCTCGCAGTCCGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EKLRTDKVQRSVPRH*RPRCHLPRPRSPSG Trigger: GCCTGACGGACTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGTCCGAAGCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | AATGGTTGCCATCATGCAGCCGGTTCCCTCTGGGCTCCTCCTTACTaGACGCGTTGCCGCAGCCAGAGTCCTCAAACACTATGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGCHHAAGSLWAPPY*TRCRSQSPQTLWRR Trigger: CCTCCTCCATAGTGTTTGAGGACTCTGGCTGCGGCAACGCGTCCAGTAAGGAGGAGCCCAGAGGGAACCGGCTGCATGATGGCAACCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CAA 90 bp | AATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCAATGTACAGATACACCTaGGGGGAGCTGGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLSPPLWRAMFLRVPALPMYRYT*GELGWS Trigger: GCTCCAGCCCAGCTCCCCCAAGGTGTATCTGTACAT...TGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 90 bp | CCTTCCGCTGCCTGTGGGGCTGAGGATGGAAAAGCCTGCGCACGATaGAGGTCGTGGCTACGATGCAAAGCAGGATCGTCCCGAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: PSAACGAEDGKACAR*RSWLRCKAGSSRIS Trigger: AGATATTCGGGACGATCCTGCTTTGCATCGTAGCCACGACCTTCATCGTGCGCAGGCTTTTCCATCCTCAGCCCCACAGGCAGCGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | ACGGACAAAGTTCAAAGGAGTGTCCCTCGTCATTGCCGTCCACGGTaGCATCTTCCACGTCCTCGCAGTCCGTCAGGCAACTGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDKVQRSVPRHCRPR*HLPRPRSPSGNCPG Trigger: TCCAGGACAGTTGCCTGACGGACTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 90 bp | CGGTTCATCCAGTCTTTGAGGTTCTCCTTCCTGCACAGCTGCATCTaGATGTACAGATACACCTTGGGGGAGCTGGGCTGGAGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RFIQSLRFSFLHSCI*MYRYTLGELGWSWP Trigger: GGGCCAGCTCCAGCCCAGCTCCCCCAAGGTGTATCTGTACATTCAGATGCAGCTGTGCAGGAAGGAGAACCTCAAAGACTGGATGAACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CAA 90 bp | GTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCACCTTCGATCTGTGCTTTCGTCTTaGAGCCAGATCTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VHRCGEPCSSGCLLCHLRSVLSS*SQISSI Trigger: GATGGATGAGATCTGGCTCAAAGACGAAAGCACAGA...TCGAAGGTGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | GGTACAGCTGGCCTCTGTACATCCCTAAGTACACGCTGTTCTCTGTaGCTCCCCGAGCAGCCTCTACAATGTCTTCTTCGTCTCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTAGLCTSLSTRCSL*LPEQPLQCLLRLPR Trigger: CCTTGGGAGACGAAGAAGACATTGTAGAGGCTGCTCGGGGAGCCACAGAGAACAGCGTGTACTTAGGGATGTACAGAGGCCAGCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | GTAGGGAACTTTTCTGAGACCCTGACGGACGACTGCAGGTACAGCTaGCCTCTGTACATCCCTAAGTACACGCTGTTCTCTGTGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGNFSETLTDDCRYS*PLYIPKYTLFSVAP Trigger: GGGAGCCACAGAGAACAGCGTGTACTTAGGGATGTACAGAGGCCAGCTGTACCTGCAGTCGTCCGTCAGGGTCTCAGAAAAGTTCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | CCTGAGAACTCCAGGGGAGAGAACTGGCTCTCCGATGAGCTTGTCTaGCCACAGGAAATGCCCACCGAGAAAGACCGACTTCTTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PENSRGENWLSDELV*PQEMPTEKDRLLSG Trigger: TCCTGAAAGAAGTCGGTCTTTCTCGGTGGGCATTTCCTGTGGCCAGACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGAGTTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | CACTTCTCACTGCCGCTTCGAGGCCCGACAGCTCGCACAGTCTTCTaGGTACGCTGCAGAAGCAAGATGTCTTCCTCTTCTTCCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFSLPLRGPTARTVF*VRCRSKMSSSSSIS Trigger: TGAAATGGAAGAAGAGGAAGACATCTTGCTTCTGCAGCGTACGCAGAAGACTGTGCGAGCTGTCGGGCCTCGAAGCGGCAGTGAGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | GCCTTTGGGCTTGTAGGGAACTTTTCTGAGACCCTGACGGACGACTaGAGGTACAGCTGGCCTCTGTACATCCCTAAGTACACGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AFGLVGNFSETLTDD*RYSWPLYIPKYTLF Trigger: GAACAGCGTGTACTTAGGGATGTACAGAGGCCAGCTGTACCTGCAGTCGTCCGTCAGGGTCTCAGAAAAGTTCCCTACAAGCCCAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | CTGCTCTTTTGTAGAGAAAGGATCCATCCTTCGGATCTTAACAGATaGGGCATCCATCGGGCTAGGGGAGCTGAGCGGCCAGTCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLFCRERIHPSDLNR*GIHRARGAERPVCA Trigger: AGCACAGACTGGCCGCTCAGCTCCCCTAGCCCGATGGATGCCCCATCTGTTAAGATCCGAAGGATGGATCCTTTCTCTACAAAAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | ACGAGCAGCTGGGCTGTCTGGAATGTTTTGTTCCAGATGAACTCATaGAGCGGGACCGCTGTCTCAGAACCGTTTTCCCGGGAAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSSWAVWNVLFQMNS*SGTAVSEPFSRETP Trigger: TGGAGTTTCCCGGGAAAACGGTTCTGAGACAGCGGTCCCGCTCCATGAGTTCATCTGGAACAAAACATTCCAGACAGCCCAGCTGCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 90 bp | GCCATTTACAGACTCCAAGGCCTTTGGGCTTGTAGGGAACTTTTCTaGGACCCTGACGGACGACTGCAGGTACAGCTGGCCTCTGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: AIYRLQGLWACRELF*DPDGRLQVQLASVH Trigger: ATGTACAGAGGCCAGCTGTACCTGCAGTCGTCCGTCAGGGTCTCAGAAAAGTTCCCTACAAGCCCAAAGGCCTTGGAGTCTGTAAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 90 bp | GCAGCCAGAGTCCTCAAACACTATGGAGGAGGACGTTCCTTCCCTTaGCCGGGTATAGGGAGAAGCTTCGGACGGACAAAGTTCAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AARVLKHYGGGRSFP*PGIGRSFGRTKFKG Trigger: TCCTTTGAACTTTGTCCGTCCGAAGCTTCTCCCTATACCCGGTCAAGGGAAGGAACGTCCTCCTCCATAGTGTTTGAGGACTCTGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CAA 90 bp | AAATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCATTGTGAAGAATATGTaGGAAGGCTTGAGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSESTAVESHVPQGACSAIVKNM*EGLRSL Trigger: CAGGGACCTCAAGCCTTCCAACATATTCTTCACAAT...GGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 90 bp | AGGCTAGATGAAACCAAGGAACCAGACCCCACGTCCAAATCCCACTaGTTTTTCCCATCATTCTCGGCATCCAGTGCAGCGATTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLDETKEPDPTSKSH*FFPSFSASSAAIRP Trigger: TGGACGAATCGCTGCACTGGATGCCGAGAATGATGGGAAAAAGCAGTGGGATTTGGACGTGGGGTCTGGTTCCTTGGTTTCATCTAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034093.15 ENSMUST00000162950.2 |
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| CDS CCA 90 bp | CTCTGGTGGGGTTTCCAGCCAGGCGTTGAAATACCTCACAATGCCTaGGTGTTCCAGCTTAGCCAAGGCTTTAACTTCCCGCATTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWWGFQPGVEIPHNA*VFQLSQGFNFPHYL Trigger: AAGGTAATGCGGGAAGTTAAAGCCTTGGCTAAGCTGGAACACCCAGGCATTGTGAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 90 bp | GTCTTTGAGCCAGATCTCATCCATCTCTTCTTGCCACTTCTCTGGTaGGGTTTCCAGCCAGGCGTTGAAATACCTCACAATGCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFEPDLIHLFLPLLW*GFQPGVEIPHNAWV Trigger: CACCCAGGCATTGTGAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGGCTCAAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS-3UTR CAA 90 bp | AATCTGAGTCCACCGCTGTGGAGAGCCATGTTCCTCAGGGTGCCTGCTCTGCCAATGGATACTGGAGGATaGAAAGTGCACCATTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLSPPLWRAMFLRVPALPMDTGG*KVHHYC Trigger: ACAGTAATGGTGCACTTTCAATCCTCCAGTATCCAT...TGGCAGAGCAGGCACCCTGAGGAACATGGCTCTCCACAGCGGTGGACTCAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TTCACTGCTGCAGACTATGACACTACCGACATAAATGGCGACCCAGCTTGTGCTGGGCTCATGTATAGCTaGGTCCCTACTTGTCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FTAADYDTTDINGDPACAGLMYS*VPTCPV Trigger: CACGGGACAAGTAGGGACCAAGCTATACATGAGCCC...AGCACAAGCTGGGTCGCCATTTATGTCGGTAGTGTCATAGTCTGCAGCAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS GCA 90 bp | CAGTCTGTGCTTTCGTCTTTGAGCCAGATCTCATCCATCTCTTCTTaGCACTTCTCTGGTGGGGTTTCCAGCCAGGCGTTGAAATACCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSVLSSLSQISSISS*HFSGGVSSQALKYL Trigger: GAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGGCTCAAAGACGAAAGCACAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACCGGTTCATCCAGTCTTaGAGGTTCTCCTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHRFIQS*RFSFLH Trigger: GTGCAGGAAGGAGAACCTCAAAGACTGGATGAACCG...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 90 bp | AATCCGGCTCTAGTTTCCATGTCTGGAATATACCGAAGTTCAAAGTaGCCAACACTGAAATTCCACTTCTCACTGCCGCTTCGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NPALVSMSGIYRSSK*PTLKFHFSLPLRGP Trigger: CGGGCCTCGAAGCGGCAGTGAGAAGTGGAATTTCAGTGTTGGCCACTTTGAACTTCGGTATATTCCAGACATGGAAACTAGAGCCGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 90 bp | GATGATCATCTTGTTCCCAAACACCTCTGGCTTGCTGAGGCTAGATaGAACCAAGGAACCAGACCCCACGTCCAAATCCCACTGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DDHLVPKHLWLAEAR*NQGTRPHVQIPLLF Trigger: AAAAAGCAGTGGGATTTGGACGTGGGGTCTGGTTCCTTGGTTTCATCTAGCCTCAGCAAGCCAGAGGTGTTTGGGAACAAGATGATCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACTGGCCCACAGTGTTCTaGGTGAAATCCAAGCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHWPTVF*VKSKLR Trigger: TCTAAGCTTGGATTTCACCAAGAACACTGTGGGCCA...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | AAATGGCGACCCAGCTTGTGCTATGTGCCTTGCAAATTAGTGCAGATGGGTCACAATATGTTGGAAGGCTaGAGGTCCCTGTGCATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KWRPSLCYVPCKLVQMGHNMLEG*RSLCMS Trigger: ACTCATGCACAGGGACCTCAAGCCTTCCAACATATT...GTGACCCATCTGCACTAATTTGCAAGGCACATAGCACAAGCTGGGTCGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 90 bp | GGGATACGTATCCTGAGTACTTCATGTCATTCCAGCTGTTGTCACTaGCATCGGCACTCACGGAGTCGTATTTACTTTCAGTCTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GIRILSTSCHSSCCH*HRHSRSRIYFQSGT Trigger: AGTGCCAGACTGAAAGTAAATACGACTCCGTGAGTGCCGATGTCAGTGACAACAGCTGGAATGACATGAAGTACTCAGGATACGTATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTCTCATCCATCTCTTCTaGCCACTTCTCTGGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CISRKHVSRTCSSHVRGSLIHLF*PLLWWG Trigger: ACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAG...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCTCCGCTGAGTCACTGTaGTCTCCGCAGTCTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FQNHPCISRKHVSRTCSSSAESL*SPQSVP Trigger: AGGGACAGACTGCGGAGACAACAGTGACTCAGCGGA...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCTGTGCATGAGTCCCTaGCTGTGCAGGAACTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: FQNHPCISRKHVSRTCSSLCMSP*LCRNST Trigger: AGTGGAGTTCCTGCACAGCAAGGGACTCATGCACAG...GGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTCCAAAGTCCCCAACCTaGACCACATCATCCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CISRKHVSRTCSSHVRGSPKSPT*TTSSIV Trigger: CACAATGGATGATGTGGTCAAGGTTGGGGACTTTGG...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTCTGCTCTTCTTCATCTaGGTCCATAGCAGTCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CISRKHVSRTCSSHVRGSLLFFI*VHSSHQ Trigger: CTGGTGACTGCTATGGACCAAGATGAAGAAGAGCAG...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 90 bp | TTTTTAGCTTCAAAGACAACGCCAAAGCCACCACGACCCATGCACTaGATTGGCTCAAAATCTGTTAGATATCGGGATACGTATCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLASKTTPKPPRPMH*IGSKSVRYRDTYPE Trigger: CTCAGGATACGTATCCCGATATCTAACAGATTTTGAGCCAATTCAGTGCATGGGTCGTGGTGGCTTTGGCGTTGTCTTTGAAGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | TGTATCTCTAGAAAGCACGTTTCTAGAACATGTAGTTCCCATGTGAGAGGGTCTCTGCTGCTGGAGCACTaGAGATCAGTTAGCTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: CISRKHVSRTCSSHVRGSLLLEH*RSVSLL Trigger: TAATAAGCTAACTGATCTCAAGTGCTCCAGCAGCAG...AGACCCTCTCACATGGGAACTACATGTTCTAGAAACGTGCTTTCTAGAGATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 90 bp | CGGTTTAAAGGTGCTTTCAATGAATCCGGCTCTAGTTTCCATGTCTaGAATATACCGAAGTTCAAAGTGGCCAACACTGAAATTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RFKGAFNESGSSFHV*NIPKFKVANTEIPL Trigger: AAGTGGAATTTCAGTGTTGGCCACTTTGAACTTCGGTATATTCCAGACATGGAAACTAGAGCCGGATTCATTGAAAGCACCTTTAAACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTTGGAGAGAGCATGTCTaGAACCATCATATGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYNNHFQNHPCISRKHVSWREHV*NHHMLL Trigger: CAAGAGCATATGATGGTTCAAGACATGCTCTCTCCA...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 90 bp | TTTTATCACTGTGTCCAGCATGGTGGCTTCTTGTTCTTCCACATCTaGAATAATTTTAGAGTCTTCTTTGTTTCCACCCGGTTTAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FYHCVQHGGFLFFHI*NNFRVFFVSTRFKG Trigger: ACCTTTAAACCGGGTGGAAACAAAGAAGACTCTAAAATTATTTCAGATGTGGAAGAACAAGAAGCCACCATGCTGGACACAGTGATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 90 bp | GTAGTATGGCAGATAGTAACCGTTATCGTATGGATACTGGAGGATTaGAAGTGCACCATTACTGTATTCTTCGTGGGAATACTTATCATT | + |
|
Preference number: 5 (lower is better) Translates to: VVWQIVTVIVWILED*KCTITVFFVGILII Trigger: AATGATAAGTATTCCCACGAAGAATACAGTAATGGTGCACTTTCAATCCTCCAGTATCCATACGATAACGGTTACTATCTGCCATACTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS-3UTR CAA 90 bp | CTTTATAACAACCACTTCCAAAATCACCCTTGTATCTCTAGAAAGCACGTTTCTGACCCATGCACTGAATaGGCTCAAAATCTGTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LYNNHFQNHPCISRKHVSDPCTE*AQNLLD Trigger: ATCTAACAGATTTTGAGCCAATTCAGTGCATGGGTC...AGAAACGTGCTTTCTAGAGATACAAGGGTGATTTTGGAAGTGGTTGTTATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 90 bp | TATGGATACTGGAGGATTGAAAGTGCACCATTACTGTATTCTTCGTaGGAATACTTATCATTACTTAGACATTTGTCAAATTCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YGYWRIESAPLLYSS*EYLSLLRHLSNSSD Trigger: GTCTGATGAATTTGACAAATGTCTAAGTAATGATAAGTATTCCCACGAAGAATACAGTAATGGTGCACTTTCAATCCTCCAGTATCCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS GCA 72 bp | CAATGCCTCGGCGTCCTCCACGGTCACTTCGGCCGTTaGCACCGCAGGCACCCGCGCGGCCGAAGTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QCLGVLHGHFGR*HRRHPRGRSRG Trigger: GCCCCGACTTCGGCCGCGCGGGTGCCTGCGGTGGCAACGGCCGAAGTGACCGTGGAGGACGCCGAGGCATTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034093.15 ENSMUST00000162950.2 |
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| CDS GCA 72 bp | AGCCAAACACTGTCTCCGACGCGGGAGCAAGCAAACTaGGGGCGGGCGCGACCGCCGAGATCCCCGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SQTLSPTREQAN*GRARPPRSPPR Trigger: GCGCGGCGGGGATCTCGGCGGTCGCGCCCGCCCGCAGTTTGCTTGCTCCCGCGTCGGAGACAGTGTTTGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034093.15 ENSMUST00000162950.2 |
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| CDS GCA 72 bp | TCTGCGATCTGCAGGAAGATGTGCAGGCACACGCCGTaGTCCCGGTCCTCCAAGCTGCAGCGCCGGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SAICRKMCRHTP*SRSSKLQRRFI Trigger: GATGAACCGGCGCTGCAGCTTGGAGGACCGGGAGCACGGCGTGTGCCTGCACATCTTCCTGCAGATCGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 72 bp | CCCTTGCTGTGCAGGAACTCCACTGCCTCTGCGATCTaGAGGAAGATGTGCAGGCACACGCCGTGCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLLCRNSTASAI*RKMCRHTPCSR Trigger: CCGGGAGCACGGCGTGTGCCTGCACATCTTCCTGCAGATCGCAGAGGCAGTGGAGTTCCTGCACAGCAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | GGGACGGCCTCCATGCTCTCTCGGTCCCGGTCCCACTaGAAGAGGTCTCCATCCAGGGAGGGGATGATCATC | + |
|
Preference number: 6 (lower is better) Translates to: GTASMLSRSRSH*KRSPSREGMII Trigger: GATGATCATCCCCTCCCTGGATGGAGACCTCTTCCAGTGGGACCGGGACCGAGAGAGCATGGAGGCCGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 72 bp | GCCTGTGGGGCTGAGGATGGAAAAGCCTGCGCACGATaGAGGTCGTGGCTACGATGCAAAGCAGGATCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACGAEDGKACAR*RSWLRCKAGSS Trigger: GGACGATCCTGCTTTGCATCGTAGCCACGACCTTCATCGTGCGCAGGCTTTTCCATCCTCAGCCCCACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS GCA 72 bp | GTTCAAAGGAGTGTCCCTCGTCATTGCCGTCCACGGTaGCATCTTCCACGTCCTCGCAGTCCGTCAGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VQRSVPRHCRPR*HLPRPRSPSGN Trigger: GTTGCCTGACGGACTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | GGAGAAGCTTCGGACGGACAAAGTTCAAAGGAGTGTCCCTCGTCATaGCCGTCCACGGTGCCATCTTCCACGTCCTCGCAGTCCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GEASDGQSSKECPSS*PSTVPSSTSSQSVR Trigger: CCTGACGGACTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGTCCGAAGCTTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | TGCCAGGCAGTGGGCTGTACGAGCAGCTGGGCTGTCTGGAATGTTTaGTTCCAGATGAACTCATGGAGCGGGACCGCTGTCTCAGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: CQAVGCTSSWAVWNV*FQMNSWSGTAVSEP Trigger: CGGTTCTGAGACAGCGGTCCCGCTCCATGAGTTCATCTGGAACAAAACATTCCAGACAGCCCAGCTGCTCGTACAGCCCACTGCCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS GCA 72 bp | CTGCCGCTTCGAGGCCCGACAGCTCGCACAGTCTTCTaGGTACGCTGCAGAAGCAAGATGTCTTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPLRGPTARTVF*VRCRSKMSSSS Trigger: AGAAGAGGAAGACATCTTGCTTCTGCAGCGTACGCAGAAGACTGTGCGAGCTGTCGGGCCTCGAAGCGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS GCA 72 bp | CGGACGGACAAAGTTCAAAGGAGTGTCCCTCGTCATTaGCGTCCACGGTGCCATCTTCCACGTCCTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTDKVQRSVPRH*RPRCHLPRPRS Trigger: ACTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 72 bp | TCGGACGGACAAAGTTCAAAGGAGTGTCCCTCGTCATaGCCGTCCACGGTGCCATCTTCCACGTCCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDGQSSKECPSS*PSTVPSSTSSQ Trigger: CTGCGAGGACGTGGAAGATGGCACCGTGGACGGCAATGACGAGGGACACTCCTTTGAACTTTGTCCGTCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | AGATACACCTTGGGGGAGCTGGGCTGGAGCTGGCCCACAGTGTTCTaGGTGAAATCCAAGCTTAGAGTGGTTGGCCTGGTAGGGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RYTLGELGWSWPTVF*VKSKLRVVGLVGEV Trigger: TACCTCCCCTACCAGGCCAACCACTCTAAGCTTGGATTTCACCAAGAACACTGTGGGCCAGCTCCAGCCCAGCTCCCCCAAGGTGTATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 72 bp | AGACTCCAAGGCCTTTGGGCTTGTAGGGAACTTTTCTaGGACCCTGACGGACGACTGCAGGTACAGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLQGLWACRELF*DPDGRLQVQLA Trigger: GGCCAGCTGTACCTGCAGTCGTCCGTCAGGGTCTCAGAAAAGTTCCCTACAAGCCCAAAGGCCTTGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 72 bp | TCCAGGGGAGAGAACTGGCTCTCCGATGAGCTTGTCTaGCCACAGGAAATGCCCACCGAGAAAGACCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SRGENWLSDELV*PQEMPTEKDRL Trigger: AAGTCGGTCTTTCTCGGTGGGCATTTCCTGTGGCCAGACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 72 bp | TGCCAGGCAGTGGGCTGTACGAGCAGCTGGGCTGTCTaGAATGTTTTGTTCCAGATGAACTCATGGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CQAVGCTSSWAV*NVLFQMNSWSG Trigger: CCCGCTCCATGAGTTCATCTGGAACAAAACATTCCAGACAGCCCAGCTGCTCGTACAGCCCACTGCCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 72 bp | AGAACTCCAGGGGAGAGAACTGGCTCTCCGATGAGCTaGTCTGGCCACAGGAAATGCCCACCGAGAAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: RTPGERTGSPMS*SGHRKCPPRKT Trigger: GGTCTTTCTCGGTGGGCATTTCCTGTGGCCAGACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGAGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | CTGTCCCTGAGAACTCCAGGGGAGAGAACTGGCTCTCCGATGAGCTaGTCTGGCCACAGGAAATGCCCACCGAGAAAGACCGACTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLRTPGERTGSPMS*SGHRKCPPRKTDFF Trigger: AAAGAAGTCGGTCTTTCTCGGTGGGCATTTCCTGTGGCCAGACAAGCTCATCGGAGAGCCAGTTCTCTCCCCTGGAGTTCTCAGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | CGCAGCCAGAGTCCTCAAACACTATGGAGGAGGACGTTCCTTCCCTaGACCGGGTATAGGGAGAAGCTTCGGACGGACAAAGTTCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQSPQTLWRRTFLP*TGYREKLRTDKVQR Trigger: CCTTTGAACTTTGTCCGTCCGAAGCTTCTCCCTATACCCGGTCAAGGGAAGGAACGTCCTCCTCCATAGTGTTTGAGGACTCTGGCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 72 bp | GTCCTCAAACACTATGGAGGAGGACGTTCCTTCCCTTaGCCGGGTATAGGGAGAAGCTTCGGACGGACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VLKHYGGGRSFP*PGIGRSFGRTK Trigger: CTTTGTCCGTCCGAAGCTTCTCCCTATACCCGGTCAAGGGAAGGAACGTCCTCCTCCATAGTGTTTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 72 bp | AGTTTTGTGGGTGCCCTCTGGCTTGCTGAGGCTAGATaGAACCAAGGAACCAGACCCCACGTCCAAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SFVGALWLAEAR*NQGTRPHVQIP Trigger: TGGGATTTGGACGTGGGGTCTGGTTCCTTGGTTTCATCTAGCCTCAGCAAGCCAGAGGGCACCCACAAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
||
| CDS CCA 72 bp | GGCCTCTGTACATCCCTAAGTACACGCTGTTCTCTGTaGCTCCCCGAGCAGCCTCTACAATGTCTTCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLCTSLSTRCSL*LPEQPLQCLLR Trigger: ACGAAGAAGACATTGTAGAGGCTGCTCGGGGAGCCACAGAGAACAGCGTGTACTTAGGGATGTACAGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 72 bp | TGGGCTGTCTGGAATGTTTTGTTCCAGATGAACTCATaGAGCGGGACCGCTGTCTCAGAACCGTTTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WAVWNVLFQMNS*SGTAVSEPFSR Trigger: CCGGGAAAACGGTTCTGAGACAGCGGTCCCGCTCCATGAGTTCATCTGGAACAAAACATTCCAGACAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CAA 90 bp | TCCATCTCTTCTTGCCACTTCTCTGGTGGGGTTTCCAGCCAGGCGTaGAAATACCTCACAATGCCTGGGTGTTCCAGCTTAGCCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SISSCHFSGGVSSQA*KYLTMPGCSSLAKA Trigger: AGCCTTGGCTAAGCTGGAACACCCAGGCATTGTGAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS TCA 72 bp | CTTGTTCCCAAACACCTCTGGCTTGCTGAGGCTAGATaGAACCAAGGAACCAGACCCCACGTCCAAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVPKHLWLAEAR*NQGTRPHVQIP Trigger: TGGGATTTGGACGTGGGGTCTGGTTCCTTGGTTTCATCTAGCCTCAGCAAGCCAGAGGTGTTTGGGAACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
||
| CDS CCA 72 bp | GGTTTCCAGCCAGGCGTTGAAATACCTCACAATGCCTaGGTGTTCCAGCTTAGCCAAGGCTTTAACTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GFQPGVEIPHNA*VFQLSQGFNFP Trigger: CGGGAAGTTAAAGCCTTGGCTAAGCTGGAACACCCAGGCATTGTGAGGTATTTCAACGCCTGGCTGGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | ATGTACAGATACACCTTGGGGGAGCTGGGCTGGAGCTaGCCCACAGTGTTCTTGGTGAAATCCAAGCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: MYRYTLGELGWS*PTVFLVKSKLR Trigger: TCTAAGCTTGGATTTCACCAAGAACACTGTGGGCCAGCTCCAGCCCAGCTCCCCCAAGGTGTATCTGTACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | CTTGGTCCCTACTTGTCCCGTGTGCGTAGCATAGGCTaGCATTGGAGTCAGTACAGTCTGCTCTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LGPYLSRVRSIG*HWSQYSLLFFI Trigger: GATGAAGAAGAGCAGACTGTACTGACTCCAATGCCAGCCTATGCTACGCACACGGGACAAGTAGGGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | AATGATGTCTGTGGCTTCAGGCCGCTCCGTGGGGGATaGAGAGAGCATGTCTTGAACCATCATATGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: NDVCGFRPLRGG*REHVLNHHMLL Trigger: CAAGAGCATATGATGGTTCAAGACATGCTCTCTCCATCCCCCACGGAGCGGCCTGAAGCCACAGACATCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | TCTTGCCACTTCTCTGGTGGGGTTTCCAGCCAGGCGTaGAAATACCTCACAATGCCTGGGTGTTCCAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SCHFSGGVSSQA*KYLTMPGCSSL Trigger: TAAGCTGGAACACCCAGGCATTGTGAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | GCTTTCGTCTTTGAGCCAGATCTCATCCATCTCTTCTaGCCACTTCTCTGGTGGGGTTTCCAGCCAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: AFVFEPDLIHLF*PLLWWGFQPGV Trigger: AACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGGCTCAAAGACGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | AGTCCTCAAACACTATGGAGGAGGACGTTCCTTCCCTaGACCGGGTATAGGGAGAAGCTTCGGACGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SPQTLWRRTFLP*TGYREKLRTDK Trigger: TTTGTCCGTCCGAAGCTTCTCCCTATACCCGGTCAAGGGAAGGAACGTCCTCCTCCATAGTGTTTGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 90 bp | CCAGTCTGTGCTTTCGTCTTTGAGCCAGATCTCATCCATCTCTTCTaGCCACTTCTCTGGTGGGGTTTCCAGCCAGGCGTTGAAATACCT | + |
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Preference number: 6 (lower is better) Translates to: PVCAFVFEPDLIHLF*PLLWWGFQPGVEIP Trigger: AGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGGCTCAAAGACGAAAGCACAGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 72 bp | CGGGAAACTCCAAGTTCTCAAATATGGCATTTTCAATaGTGTCTGTGGCTTCAGGCCGCTCCGTGGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: RETPSSQIWHFQ*CLWLQAAPWGM Trigger: CATCCCCCACGGAGCGGCCTGAAGCCACAGACATCATTGAAAATGCCATATTTGAGAACTTGGAGTTTCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | GGCATTGGAGTCAGTACAGTCTGCTCTTCTTCATCTTaGTCCATAGCAGTCACCAGTCCAAAGTCCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: GIGVSTVCSSSS*SIAVTSPKSPT Trigger: GGTTGGGGACTTTGGACTGGTGACTGCTATGGACCAAGATGAAGAAGAGCAGACTGTACTGACTCCAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | TTCAGGCCGCTCCGTGGGGGATGGAGAGAGCATGTCTaGAACCATCATATGCTCTTGGGGATATTTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FRPLRGGWREHV*NHHMLLGIFLS Trigger: ACTCAGAAATATCCCCAAGAGCATATGATGGTTCAAGACATGCTCTCTCCATCCCCCACGGAGCGGCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | CATTCTTTTGAGGAAGTTTTGTGGGTGCCCTCTGGCTaGCTGAGGCTAGATGAAACCAAGGAACCAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: HSFEEVLWVPSG*LRLDETKEPDP Trigger: GGGGTCTGGTTCCTTGGTTTCATCTAGCCTCAGCAAGCCAGAGGGCACCCACAAAACTTCCTCAAAAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162950.2 |
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| CDS TCA 72 bp | TGTCTGGAATATACCGAAGTTCAAAGTGGCCAACACTaGAATTCCACTTCTCACTGCCGCTTCGAGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: CLEYTEVQSGQH*NSTSHCRFEAR Trigger: TCGGGCCTCGAAGCGGCAGTGAGAAGTGGAATTTCAGTGTTGGCCACTTTGAACTTCGGTATATTCCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | CCAGATCTCATCCATCTCTTCTTGCCACTTCTCTGGTaGGGTTTCCAGCCAGGCGTTGAAATACCTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: PDLIHLFLPLLW*GFQPGVEIPHN Trigger: ATTGTGAGGTATTTCAACGCCTGGCTGGAAACCCCACCAGAGAAGTGGCAAGAAGAGATGGATGAGATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 90 bp | TCTTCATCTTGGTCCATAGCAGTCACCAGTCCAAAGTCCCCAACCTaGACCACATCATCCATTGTGAAGAATATGTTGGAAGGCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSWSIAVTSPKSPT*TTSSIVKNMLEGLR Trigger: CCTCAAGCCTTCCAACATATTCTTCACAATGGATGATGTGGTCAAGGTTGGGGACTTTGGACTGGTGACTGCTATGGACCAAGATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | AGACAACGCCAAAGCCACCACGACCCATGCACTGAATaGGCTCAAAATCTGTTAGATATCGGGATACGTATC | + |
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Preference number: 6 (lower is better) Translates to: RQRQSHHDPCTE*AQNLLDIGIRI Trigger: GATACGTATCCCGATATCTAACAGATTTTGAGCCAATTCAGTGCATGGGTCGTGGTGGCTTTGGCGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 90 bp | AGATATCGGGATACGTATCCTGAGTACTTCATGTCATTCCAGCTGTaGTCACTGACATCGGCACTCACGGAGTCGTATTTACTTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RYRDTYPEYFMSFQL*SLTSALTESYLLSV Trigger: GACTGAAAGTAAATACGACTCCGTGAGTGCCGATGTCAGTGACAACAGCTGGAATGACATGAAGTACTCAGGATACGTATCCCGATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 72 bp | ATCCTGAGTACTTCATGTCATTCCAGCTGTTGTCACTaGCATCGGCACTCACGGAGTCGTATTTACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ILSTSCHSSCCH*HRHSRSRIYFQ Trigger: CTGAAAGTAAATACGACTCCGTGAGTGCCGATGTCAGTGACAACAGCTGGAATGACATGAAGTACTCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 72 bp | CATCAGTTAAAATCCGGACTCGTTCCATCTGGGTGCTaGATGGGTAGAGGAGTTCAAACAGAATCAAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: HQLKSGLVPSGC*MGRGVQTESSL Trigger: TAGGCTTGATTCTGTTTGAACTCCTCTACCCATTCAGCACCCAGATGGAACGAGTCCGGATTTTAACTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | GGAGTCCTAGAAGGAGAATGGATTAAGGGCTTCCATTaGATCGTCGGCAGAGGAATAATTGCATTTTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: GVLEGEWIKGFH*IVGRGIIAFSP Trigger: TGGCGAAAATGCAATTATTCCTCTGCCGACGATCAAATGGAAGCCCTTAATCCATTCTCCTTCTAGGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | GATACGTATCCTGAGTACTTCATGTCATTCCAGCTGTaGTCACTGACATCGGCACTCACGGAGTCGTATTTA | + |
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Preference number: 6 (lower is better) Translates to: DTYPEYFMSFQL*SLTSALTESYL Trigger: TAAATACGACTCCGTGAGTGCCGATGTCAGTGACAACAGCTGGAATGACATGAAGTACTCAGGATACGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | TGGTCCATAGCAGTCACCAGTCCAAAGTCCCCAACCTaGACCACATCATCCATTGTGAAGAATATGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: WSIAVTSPKSPT*TTSSIVKNMLE Trigger: TTCCAACATATTCTTCACAATGGATGATGTGGTCAAGGTTGGGGACTTTGGACTGGTGACTGCTATGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CCA 72 bp | CTAGTTTCCATGTCTGGAATATACCGAAGTTCAAAGTaGCCAACACTGAAATTCCACTTCTCACTGCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LVSMSGIYRSSK*PTLKFHFSLPL Trigger: AAGCGGCAGTGAGAAGTGGAATTTCAGTGTTGGCCACTTTGAACTTCGGTATATTCCAGACATGGAAACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 72 bp | GCAGATAGTAACCGTTATCGTATGGATACTGGAGGATaGAAAGTGCACCATTACTGTATTCTTCGTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: ADSNRYRMDTGG*KVHHYCILRGN Trigger: ATTCCCACGAAGAATACAGTAATGGTGCACTTTCAATCCTCCAGTATCCATACGATAACGGTTACTATCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS TCA 72 bp | CAGATAGTAACCGTTATCGTATGGATACTGGAGGATTaGAAGTGCACCATTACTGTATTCTTCGTGGGAATA | + |
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Preference number: 6 (lower is better) Translates to: QIVTVIVWILED*KCTITVFFVGI Trigger: TATTCCCACGAAGAATACAGTAATGGTGCACTTTCAATCCTCCAGTATCCATACGATAACGGTTACTATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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| CDS CAA 90 bp | TGTAGTATGGCAGATAGTAACCGTTATCGTATGGATACTGGAGGATaGAAAGTGCACCATTACTGTATTCTTCGTGGGAATACTTATCAT | + |
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Preference number: 6 (lower is better) Translates to: CSMADSNRYRMDTGG*KVHHYCILRGNTYH Trigger: ATGATAAGTATTCCCACGAAGAATACAGTAATGGTGCACTTTCAATCCTCCAGTATCCATACGATAACGGTTACTATCTGCCATACTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034093.15 |
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