Pregenerated sensors for EIF2AK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029613Ensembl transcript IDs: ENSMUST00000100487.6
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGCCATGGCAGCAGTACAGAAGGACCAGGGAAGACTTGCAGCTaGCACAGCAACAGCAGCCAGGCTGGCAGTCATCCTGGGGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TGHGSSTEGPGKTCS*HSNSSQAGSHPGAG Trigger: GCCTGCCCCAGGATGACTGCCAGCCTGGCTGCTGTTGCTGTGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCCATGGCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | AACAGCAGCCAGGCTGGCAGTCATCCTGGGGCAGGCAAGCGGGTGTaGGGAGGGAGCACTGATTCTGTAGTACAGCCCTCGGGAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: NSSQAGSHPGAGKRV*GGSTDSVVQPSGRK Trigger: CTTCCTTCCCGAGGGCTGTACTACAGAATCAGTGCTCCCTCCCCACACCCGCTTGCCTGCCCCAGGATGACTGCCAGCCTGGCTGCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | GCGGCCGTGTTCCGCTCTATGAACTCCGCTTTGGGGAGGAGCCCGTaGCTGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: AAVFRSMNSALGRSP*LVGNELTVADVVLW Trigger: CCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAACACGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | TGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTaGTCCAGCAGACTGGGGGCAGCAGTGGGGCAGCACCCACCAATG | + |
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Preference number: 1 (lower is better) Translates to: WLEMSSLWQMWCCGL*SSRLGAAVGQHPPM Trigger: CATTGGTGGGTGCTGCCCCACTGCTGCCCCCAGTCTGCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | CTCTATGAACTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTGGAAATaGGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LYELRFGEEPVAGWK*AHCGRCGAVVCAPA Trigger: TGCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | TTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATaGACTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTGGAAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: FEKAAVKKKRPCSAL*TPLWGGARGWLEMS Trigger: GCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | CAGCACCCACCAATGTGCAGCGGTGGCTTAAGTCCTGTGAAAACCTaGCCCCCTTCAGCACTGCCCTTCAGCTCCTTAAGTGAATTCGAG | + |
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Preference number: 1 (lower is better) Translates to: QHPPMCSGGLSPVKT*PPSALPFSSLSEFE Trigger: CTCGAATTCACTTAAGGAGCTGAAGGGCAGTGCTGAAGGGGGCCAGGTTTTCACAGGACTTAAGCCACCGCTGCACATTGGTGGGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | CTGCCAGCCAGAGGCAGGCACTTTATGGCGTCAGAGATTGCTATCTaGGGACTTCAGGTGGTTTGGGGAGTTGGGGCTTTAAGGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LPARGRHFMASEIAI*GLQVVWGVGALRRQ Trigger: TTGCCTCCTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGACGCCATAAAGTGCCTGCCTCTGGCTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | ATGCTGAGCCACCCAGTGCTATCTCCCTCAGCCTCACGTCCAGAGTaGAGAGATCCTTGCCCTGGGCAAGCAATGGAACGTCTAGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: MLSHPVLSPSASRPE*RDPCPGQAMERLVS Trigger: AGAAACTAGACGTTCCATTGCTTGCCCAGGGCAAGGATCTCTTCACTCTGGACGTGAGGCTGAGGGAGATAGCACTGGGTGGCTCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | GAGATGGCTGCCAGCCAGAGGCAGGCACTTTATGGCGTCAGAGATTaGTATCTGAGGACTTCAGGTGGTTTGGGGAGTTGGGGCTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: EMAASQRQALYGVRD*YLRTSGGLGSWGFK Trigger: CTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGACGCCATAAAGTGCCTGCCTCTGGCTGGCAGCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | AGCTGCAGGATGATGCCAAGTGGAAAGAACAGAGGGCTGGAAGAGTaGACAGTGCTTCGAAGCAGAACTCTGACCTTCCAGGCAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: SCRMMPSGKNRGLEE*TVLRSRTLTFQAVQ Trigger: CTGTACTGCCTGGAAGGTCAGAGTTCTGCTTCGAAGCACTGTGCACTCTTCCAGCCCTCTGTTCTTTCCACTTGGCATCATCCTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | GACATTTTGAGCCAAGGAGTGATCAAGTGTCCTGGTAACTGGCCATaGCAGCAGTACAGAAGGACCAGGGAAGACTTGCAGCTGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: DILSQGVIKCPGNWP*QQYRRTREDLQLPQ Trigger: CTGTGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCCATGGCCAGTTACCAGGACACTTGATCACTCCTTGGCTCAAAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | CTCAGAAACAACAAAAATGTAAAAACTAAAGGCTCAGCTGGGCAGTaGTGGCGCACGCCTTTCGTCCCAGTACTTGGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LRNNKNVKTKGSAGQ*WRTPFVPVLGRQRQ Trigger: CTGCCTCTGCCTCCCAAGTACTGGGACGAAAGGCGTGCGCCACCACTGCCCAGCTGAGCCTTTAGTTTTTACATTTTTGTTGTTTCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | AGAAACAACAAAAATGTAAAAACTAAAGGCTCAGCTGGGCAGTGGTaGCGCACGCCTTTCGTCCCAGTACTTGGGAGGCAGAGGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: RNNKNVKTKGSAGQW*RTPFVPVLGRQRQV Trigger: TACCTGCCTCTGCCTCCCAAGTACTGGGACGAAAGGCGTGCGCCACCACTGCCCAGCTGAGCCTTTAGTTTTTACATTTTTGTTGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | GAAGACATTTTAGCTGCTGAGATCACTTTAGGGCAAGCTGCAGGATaGTGCCAAGTGGAAAGAACAGAGGGCTGGAAGAGTGCACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: EDILAAEITLGQAAG*CQVERTEGWKSAQC Trigger: GCACTGTGCACTCTTCCAGCCCTCTGTTCTTTCCACTTGGCATCATCCTGCAGCTTGCCCTAAAGTGATCTCAGCAGCTAAAATGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | AAGTCTTCTACGTTGTCCTGTGTTCTGCTTATAAGCCCTGAGGACTaGACTCAGGAGCCTGTACCCACAGTCATCTCACTGGGCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: KSSTLSCVLLISPED*TQEPVPTVISLGLD Trigger: ATCAAGGCCCAGTGAGATGACTGTGGGTACAGGCTCCTGAGTTCAGTCCTCAGGGCTTATAAGCAGAACACAGGACAACGTAGAAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | TCCCTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTaGAGTGCCCAAGACACAGATGAAGTTCAGTGTACAAACCATGTG | + |
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Preference number: 1 (lower is better) Translates to: SLFHTGHTDSGGLFL*SAQDTDEVQCTNHV Trigger: CACATGGTTTGTACACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | GCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTaGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGTAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: ARSIMLSPSPSSIAG*ISPCFSFEKAAVKK Trigger: TTTCTTTACTGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | TTTGGCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTaGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: FGQKHNAVTLTLIDS*VDIAMFQLREGSSK Trigger: TTTACTGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTTCTGGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | GCCCAAGACACAGATGAAGTTCAGTGTACAAACCATGTGCCCCATTaGAGGAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: AQDTDEVQCTNHVPH*RRREHRTFPVLSVW Trigger: CCAAACAGAGAGAACAGGAAACGTGCGATGTTCCCTTCTCCTTCAATGGGGCACATGGTTTGTACACTGAACTTCATCTGTGTCTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | TTTGCAGTGCCCAAGACACAGATGAAGTTCAGTGTACAAACCATGTaGCCCATTGAAGGAGAAGGGAACATCGCACGTTTCCTGTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: FAVPKTQMKFSVQTM*PIEGEGNIARFLFS Trigger: AGAGAACAGGAAACGTGCGATGTTCCCTTCTCCTTCAATGGGGCACATGGTTTGTACACTGAACTTCATCTGTGTCTTGGGCACTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR GCA 90 bp | CTCTGGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTaGACATGCACCTTTATGCTGAGCCACCCAGTGCTATCTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LWPLVFLSQLPEKEF*TCTFMLSHPVLSPS Trigger: TGAGGGAGATAGCACTGGGTGGCTCAGCATAAAGGTGCATGTGCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR TCA 90 bp | TCATGGGAGACTATACAGAATAAAGGTAGAAGACATTTTAGCTGCTaGGATCACTTTAGGGCAAGCTGCAGGATGATGCCAAGTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SWETIQNKGRRHFSC*DHFRASCRMMPSGK Trigger: CTTTCCACTTGGCATCATCCTGCAGCTTGCCCTAAAGTGATCTCAGCAGCTAAAATGTCTTCTACCTTTATTCTGTATAGTCTCCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | TTTGAGACAGTGTCTCAATTCATAACCCAAGCTAGCTCCAAACTCTaGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTGC | + |
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Preference number: 1 (lower is better) Translates to: FETVSQFITQASSKL*PLVFLSQLPEKEFC Trigger: GCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAGTTTGGAGCTAGCTTGGGTTATGAATTGAGACACTGTCTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CCA 90 bp | ACCAAGCAAACAGAAAACCTAAAGGCTCTTGCATATTACAGATGTTaGGTCATGTTTTTGAAGATGATCTTGCTATCAGCTCATGAATGT | + |
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Preference number: 1 (lower is better) Translates to: TKQTENLKALAYYRC*VMFLKMILLSAHEC Trigger: ACATTCATGAGCTGATAGCAAGATCATCTTCAAAAACATGACCCAACATCTGTAATATGCAAGAGCCTTTAGGTTTTCTGTTTGCTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 90 bp | CCTGGTAACTGGCCATGGCAGCAGTACAGAAGGACCAGGGAAGACTaGCAGCTGCCACAGCAACAGCAGCCAGGCTGGCAGTCATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGNWPWQQYRRTRED*QLPQQQQPGWQSSW Trigger: CCAGGATGACTGCCAGCCTGGCTGCTGTTGCTGTGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCCATGGCCAGTTACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 90 bp | CCCAGTGCTATCTCCCTCAGCCTCACGTCCAGAGTGAAGAGATCCTaGCCCTGGGCAAGCAATGGAACGTCTAGTTTCTGGGCTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: PSAISLSLTSRVKRS*PWASNGTSSFWAVA Trigger: GGCTACAGCCCAGAAACTAGACGTTCCATTGCTTGCCCAGGGCAAGGATCTCTTCACTCTGGACGTGAGGCTGAGGGAGATAGCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACCAACAGCAGCCAGGCTaGCAGTCATCCTGGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLREGSSKEKAAVFRSMNQQQPG*QSSWGR Trigger: CCTGCCCCAGGATGACTGCCAGCCTGGCTGCTGTTG...GTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | ACCATGTGCCCCATTGAAGGAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGGACTGGGGGCAGCAGTaGGGCAGCACCCACCAATGT | + |
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Preference number: 2 (lower is better) Translates to: TMCPIEGEGNIARFLFSLDWGQQ*GSTHQC Trigger: ACATTGGTGGGTGCTGCCCCACTGCTGCCCCCAGTC...CAGAGAGAACAGGAAACGTGCGATGTTCCCTTCTCCTTCAATGGGGCACATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 90 bp | AGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACTCCGCTTaGGGGAGGAGCCCGTGGCTGGTTGGAAATGAGCTCACTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSKEKAAVFRSMNSA*GRSPWLVGNELTVA Trigger: TGCCACAGTGAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCGGTGGTTTGGGGAGTTaGGGCTTTAAGGAGGCAACG | + |
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Preference number: 2 (lower is better) Translates to: WLEMSSLWQMWCCGLCSSGGLGS*GFKEAT Trigger: CGTTGCCTCCTTAAAGCCCCAACTCCCCAAACCACC...GCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR GCA 90 bp | CTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCCAAGACACAGATGAAGTTCAGTGGGAAGACTTGCAGCTaGCACAGCAACAGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LTLVAFSFAVPKTQMKFSGKTCS*HSNSSQ Trigger: CTGGCTGCTGTTGCTGTGGCAGCTGCAAGTCTTCCC...ACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACGCAGATGTGGTGCTGTaGTCTGTGCTCCAGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: QLREGSSKEKAAVFRSMNADVVL*SVLQQT Trigger: AGTCTGCTGGAGCACAGACCACAGCACCACATCTGC...GTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGGAGGCAGAGGCAGGTAGATCTCTTGAGTTTGAGACCAGCCTAGATTACCCACACAGGACACACTaGCTCTGGTGGCCTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TWEAEAGRSLEFETSLDYPHRTH*LWWPFP Trigger: AGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGG...GTAATCTAGGCTGGTCTCAAACTCAAGAGATCTACCTGCCTCTGCCTCCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTCATCGATAGCTGGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGAAAGAACAGAGGGCTaGAAGAGTGCACAGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSSIAGWISPCFSFEKAAERTEG*KSAQCF Trigger: GAAGCACTGTGCACTCTTCCAGCCCTCTGTTCTTTC...TGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 90 bp | GCACTTTATGGCGTCAGAGATTGCTATCTGAGGACTTCAGGTGGTTaGGGGAGTTGGGGCTTTAAGGAGGCAACGGATCATGGGAGACTA | + |
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Preference number: 2 (lower is better) Translates to: ALYGVRDCYLRTSGG*GSWGFKEATDHGRL Trigger: TAGTCTCCCATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGACGCCATAAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCCAATCATCGATAGCTGGGTaGATATCGCCATGTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LFHTGHTDSGGLFLCSAQSSIAG*ISPCFS Trigger: GCTGAAACATGGCGATATCCACCCAGCTATCGATGA...TTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 90 bp | CCATTGAAGGAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGTTaGGCCAGAAGCATAATGCTGTCACCCTCACCCTCATCGATAGCT | + |
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Preference number: 2 (lower is better) Translates to: PLKEKGTSHVSCSLC*ARSIMLSPSPSSIA Trigger: AGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGATGTTCCCTTCTCCTTCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTGCACATGCACGCCTCACGTCCAGAGTaGAGAGATCCTTGCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LAFGFLISTSRERILHMHASRPE*RDPCPG Trigger: CCCAGGGCAAGGATCTCTTCACTCTGGACGTGAGGC...GTGCATGTGCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | CACAGAGAAATACCTCTCCTGCCTGAGCTTCATTTAGGTAGAAACACATTATTGCCAAGTGCAGTGCACTaGGATGGCTGCCAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HREIPLLPELHLGRNTLLPSAVH*DGCQPE Trigger: CTCTGGCTGGCAGCCATCTCAGTGCACTGCACTTGG...CAATAATGTGTTTCTACCTAAATGAAGCTCAGGCAGGAGAGGTATTTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | TCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCAACCAATGTGCAGCGGTaGCTTAAGTCCTGTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SHVSCSLCLARSIMLSPSTNVQR*LKSCEN Trigger: GTTTTCACAGGACTTAAGCCACCGCTGCACATTGGT...TGAGGGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCCTTTTCCTTTGCAGTGCCCAAGACACAGATGAAGTTCAGTGTACAAACTCAGAGATTGCTATCTaGGGACTTCAGGTGGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GGLFLCSAQDTDEVQCTNSEIAI*GLQVVW Trigger: CCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGA...GTTTGTACACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCTGTCACCCGTTCAGTGATACCTGTCCTATTTTGAGACAGTGTCTCAATAACCATGTGCCCCATTaGAGGAGAAGGGAACATCGC | + |
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Preference number: 2 (lower is better) Translates to: IACHPFSDTCPILRQCLNNHVPH*RRREHR Trigger: GCGATGTTCCCTTCTCCTTCAATGGGGCACATGGTT...ATTGAGACACTGTCTCAAAATAGGACAGGTATCACTGAACGGGTGACAGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR GCA 90 bp | ATTGCCTGTCACCCGTTCAGTGATACCTGTCCTATTTTGAGACAGTGTCTCAATAGAGGGCTGGAAGAGTaGACAGTGCTTCGAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IACHPFSDTCPILRQCLNRGLEE*TVLRSR Trigger: TCTGCTTCGAAGCACTGTGCACTCTTCCAGCCCTCT...ATTGAGACACTGTCTCAAAATAGGACAGGTATCACTGAACGGGTGACAGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCCAAGTCCTCACTAAGGGTTaGAAATGTACATTCCTATTG | + |
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Preference number: 2 (lower is better) Translates to: LFHTGHTDSGGLFLCSAQVLTKG*KCTFLL Trigger: CAATAGGAATGTACATTTCCAACCCTTAGTGAGGAC...TTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCTGTCACCCGTTCAGTGATACCTGTCCTATTTTGAGACAGTGTCTCAATGAGGCAGGCACTTTATaGCGTCAGAGATTGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: IACHPFSDTCPILRQCLNEAGTL*RQRLLS Trigger: AGATAGCAATCTCTGACGCCATAAAGTGCCTGCCTC...ATTGAGACACTGTCTCAAAATAGGACAGGTATCACTGAACGGGTGACAGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR-3UTR TCA 90 bp | TGTAAAGGACAGCAGGGTATTATTTATTCATTGTTCCACAGAGAAATACCTCTCTCTGCTTATAAGCCCTaGGGACTGAACTCAGGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: CKGQQGIIYSLFHREIPLSAYKP*GLNSGA Trigger: GGCTCCTGAGTTCAGTCCTCAGGGCTTATAAGCAGA...GAGAGGTATTTCTCTGTGGAACAATGAATAAATAATACCCTGCTGTCCTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 90 bp | GCTCTTGCATATTACAGATGTTGGGTCATGTTTTTGAAGATGATCTaGCTATCAGCTCATGAATGTGATGAGTTCCCTCTTCCACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ALAYYRCWVMFLKMI*LSAHECDEFPLPHR Trigger: CCTGTGTGGAAGAGGGAACTCATCACATTCATGAGCTGATAGCAAGATCATCTTCAAAAACATGACCCAACATCTGTAATATGCAAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAAGGACAGCAGGGTATTATTTATTCATTGTTCCACAGAGAAATACCTCTCCATCTCACTGGGCCTTaGTCACTTTTTGAAGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CKGQQGIIYSLFHREIPLHLTGP*SLFEGS Trigger: ACTCCCTTCAAAAAGTGATCAAGGCCCAGTGAGATG...GAGAGGTATTTCTCTGTGGAACAATGAATAAATAATACCCTGCTGTCCTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 90 bp | GAAAACCTAAAGGCTCTTGCATATTACAGATGTTGGGTCATGTTTTaGAAGATGATCTTGCTATCAGCTCATGAATGTGATGAGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ENLKALAYYRCWVMF*KMILLSAHECDEFP Trigger: AGGGAACTCATCACATTCATGAGCTGATAGCAAGATCATCTTCAAAAACATGACCCAACATCTGTAATATGCAAGAGCCTTTAGGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAAGGACAGCAGGGTATTATTTATTCATTGTTCCACAGAGAAATACCTCTCGGAGGCAACGGATCATaGGAGACTATACAGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: CKGQQGIIYSLFHREIPLGGNGS*ETIQNK Trigger: TTTATTCTGTATAGTCTCCCATGATCCGTTGCCTCC...GAGAGGTATTTCTCTGTGGAACAATGAATAAATAATACCCTGCTGTCCTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 90 bp | CAACAGAAGAATGGTACGGCTTCCAGTCTGTTGTCAGAAAGGGACTaGTCCAATAAAGTACCATATCATCTATGGAGTTTATTTTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QQKNGTASSLLSERD*SNKVPYHLWSLFYF Trigger: AAAATAAAATAAACTCCATAGATGATATGGTACTTTATTGGACAAGTCCCTTTCTGACAACAGACTGGAAGCCGTACCATTCTTCTGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | CTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTGGAAATaGGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRFGEEPVAGWK*AHCGRCGAVVC Trigger: ACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR GCA 72 bp | GGCAGCAGTACAGAAGGACCAGGGAAGACTTGCAGCTaGCACAGCAACAGCAGCCAGGCTGGCAGTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSSTEGPGKTCS*HSNSSQAGSHP Trigger: AGGATGACTGCCAGCCTGGCTGCTGTTGCTGTGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | GCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATaGACTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AAVKKKRPCSAL*TPLWGGARGWL Trigger: CAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | TGGGCAGTGGTGGCGCACGCCTTTCGTCCCAGTACTTaGGAGGCAGAGGCAGGTAGATCTCTTGAGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WAVVAHAFRPST*EAEAGRSLEFE Trigger: CTCAAACTCAAGAGATCTACCTGCCTCTGCCTCCCAAGTACTGGGACGAAAGGCGTGCGCCACCACTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | CACCCAGTGCTATCTCCCTCAGCCTCACGTCCAGAGTaGAGAGATCCTTGCCCTGGGCAAGCAATGGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: HPVLSPSASRPE*RDPCPGQAMER Trigger: ACGTTCCATTGCTTGCCCAGGGCAAGGATCTCTTCACTCTGGACGTGAGGCTGAGGGAGATAGCACTGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | TTCCGCTCTATGAACTCCGCTTTGGGGAGGAGCCCGTaGCTGGTTGGAAATGAGCTCACTGTGGCAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRSMNSALGRSP*LVGNELTVADV Trigger: CACATCTGCCACAGTGAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | GGAGGTGGGAGGAAGAGGCTTCATTTAGTCCAGTCTTaGGTCATGGAAGGGTTGAGGGAAAGGAAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGGRKRLHLVQS*VMEGLRERKLG Trigger: CCCCAGCTTCCTTTCCCTCAACCCTTCCATGACCCAAGACTGGACTAAATGAAGCCTCTTCCTCCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | GGCTGGAAGAGTGCACAGTGCTTCGAAGCAGAACTCTaGCCTTCCAGGCAGTACAGAGCCCACAGACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: GWKSAQCFEAEL*PSRQYRAHRHF Trigger: AAAATGTCTGTGGGCTCTGTACTGCCTGGAAGGTCAGAGTTCTGCTTCGAAGCACTGTGCACTCTTCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | AGAGGCAGGCACTTTATGGCGTCAGAGATTGCTATCTaGGGACTTCAGGTGGTTTGGGGAGTTGGGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RGRHFMASEIAI*GLQVVWGVGAL Trigger: TAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGACGCCATAAAGTGCCTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | GAATGTGATGAGTTCCCTCTTCCACACAGGACACACTaGCTCTGGTGGCCTTTTCCTTTGCAGTGCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ECDEFPLPHRTH*LWWPFPLQCPR Trigger: TCTTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAGGGAACTCATCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | ACGTTGTCCTGTGTTCTGCTTATAAGCCCTGAGGACTaGACTCAGGAGCCTGTACCCACAGTCATCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: TLSCVLLISPED*TQEPVPTVISL Trigger: CAGTGAGATGACTGTGGGTACAGGCTCCTGAGTTCAGTCCTCAGGGCTTATAAGCAGAACACAGGACAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | TTCCAGAGAAAGAATTCTGCACATGCACCTTTATGCTaGGCCACCCAGTGCTATCTCCCTCAGCCTCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: FQRKNSAHAPLC*ATQCYLPQPHV Trigger: GACGTGAGGCTGAGGGAGATAGCACTGGGTGGCTCAGCATAAAGGTGCATGTGCAGAATTCTTTCTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR GCA 72 bp | ATGATGCCAAGTGGAAAGAACAGAGGGCTGGAAGAGTaGACAGTGCTTCGAAGCAGAACTCTGACCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MMPSGKNRGLEE*TVLRSRTLTFQ Trigger: CTGGAAGGTCAGAGTTCTGCTTCGAAGCACTGTGCACTCTTCCAGCCCTCTGTTCTTTCCACTTGGCATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | GATTGCTATCTGAGGACTTCAGGTGGTTTGGGGAGTTaGGGCTTTAAGGAGGCAACGGATCATGGGAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: DCYLRTSGGLGS*GFKEATDHGRL Trigger: TAGTCTCCCATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | ATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTaGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IMLSPSPSSIAG*ISPCFSFEKAA Trigger: TGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | AAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTaGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KHNAVTLTLIDS*VDIAMFQLREG Trigger: GCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | AACAAAAATGTAAAAACTAAAGGCTCAGCTGGGCAGTaGTGGCGCACGCCTTTCGTCCCAGTACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NKNVKTKGSAGQ*WRTPFVPVLGR Trigger: CCTCCCAAGTACTGGGACGAAAGGCGTGCGCCACCACTGCCCAGCTGAGCCTTTAGTTTTTACATTTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | GTCTTCTACGTTGTCCTGTGTTCTGCTTATAAGCCCTaGGGACTGAACTCAGGAGCCTGTACCCACAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VFYVVLCSAYKP*GLNSGACTHSH Trigger: ATGACTGTGGGTACAGGCTCCTGAGTTCAGTCCTCAGGGCTTATAAGCAGAACACAGGACAACGTAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR GCA 72 bp | CACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTaGAGTGCCCAAGACACAGATGAAGTTCAGTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: HTGHTDSGGLFL*SAQDTDEVQCT Trigger: TGTACACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | CCTATTGACTATAATGCAAGTCCACTTTCACATGCTTaGCGGCATAACTCAGGCCACAGGGTAGGCCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: PIDYNASPLSHA*RHNSGHRVGPI Trigger: AATGGGGCCTACCCTGTGGCCTGAGTTATGCCGCCAAGCATGTGAAAGTGGACTTGCATTATAGTCAATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | TGGTGGCCTTTTCCTTTGCAGTGCCCAAGACACAGATaGAGTTCAGTGTACAAACCATGTGCCCCATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WWPFPLQCPRHR*SSVYKPCAPLK Trigger: CTTCAATGGGGCACATGGTTTGTACACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR GCA 72 bp | CCCAAGACACAGATGAAGTTCAGTGTACAAACCATGTaGCCCATTGAAGGAGAAGGGAACATCGCACGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKTQMKFSVQTM*PIEGEGNIARF Trigger: GAAACGTGCGATGTTCCCTTCTCCTTCAATGGGGCACATGGTTTGTACACTGAACTTCATCTGTGTCTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CAA 90 bp | TATTTTGAGACAGTGTCTCAATTCATAACCCAAGCTAGCTCCAAACTCTGGCCTAGGACTTCAGGTGGTTaGGGGAGTTGGGGCTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YFETVSQFITQASSKLWPRTSGG*GSWGFK Trigger: CTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCT...AGGCCAGAGTTTGGAGCTAGCTTGGGTTATGAATTGAGACACTGTCTCAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | ACAGATGAAGTTCAGTGTACAAACCATGTGCCCCATTaGAGGAGAAGGGAACATCGCACGTTTCCTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TDEVQCTNHVPH*RRREHRTFPVL Trigger: GAGAACAGGAAACGTGCGATGTTCCCTTCTCCTTCAATGGGGCACATGGTTTGTACACTGAACTTCATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCTGTCACCCGTTCAGTGATACCTGTCCTATTTTGAGACAGTGTCTCAATTTGAGGAATCAAAACTaGGAGGAGGTGGGAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IACHPFSDTCPILRQCLNLRNQN*EEVGGR Trigger: TCTTCCTCCCACCTCCTCCAAGTTTTGATTCCTCAA...ATTGAGACACTGTCTCAAAATAGGACAGGTATCACTGAACGGGTGACAGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACTTGTCAGAAAGGGACTaGTCCAATAAAGTACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: QLREGSSKEKAAVFRSMNLSERD*SNKVPY Trigger: ATATGGTACTTTATTGGACAAGTCCCTTTCTGACAA...GTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGAAATACCTCTCCTGCCTGAGCTTCATTTAGGTAGAAACACATTATTGAGAGTGAAGAGATCCTaGCCCTGGGCAAGCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: HREIPLLPELHLGRNTLLRVKRS*PWASNG Trigger: TCCATTGCTTGCCCAGGGCAAGGATCTCTTCACTCT...CAATAATGTGTTTCTACCTAAATGAAGCTCAGGCAGGAGAGGTATTTCTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR GCA 72 bp | TTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTaGACATGCACCTTTATGCTGAGCCACCCAGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVFLSQLPEKEF*TCTFMLSHPVL Trigger: TAGCACTGGGTGGCTCAGCATAAAGGTGCATGTGCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | GTACAACTGGGAGTCACACCTGTCCTCACTAAGGGTTaGAAATGTACATTCCTATTGACTATAATGCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VQLGVTPVLTKG*KCTFLLTIMQV Trigger: GACTTGCATTATAGTCAATAGGAATGTACATTTCCAACCCTTAGTGAGGACAGGTGTGACTCCCAGTTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTGGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTGCACATTCCTGTTCTCTCTGTTaGGCCAGAAGCATAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSGLWFSYLNFQRKNSAHSCSLC*ARSIML Trigger: CAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGA...ATGTGCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR TCA 72 bp | ACTATACAGAATAAAGGTAGAAGACATTTTAGCTGCTaGGATCACTTTAGGGCAAGCTGCAGGATGATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TIQNKGRRHFSC*DHFRASCRMMP Trigger: TGGCATCATCCTGCAGCTTGCCCTAAAGTGATCTCAGCAGCTAAAATGTCTTCTACCTTTATTCTGTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | CCTTTTAAGTCTTTACATAGGTTTTCTCAGTACAACTaGGAGTCACACCTGTCCTCACTAAGGGTTGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PFKSLHRFSQYN*ESHLSSLRVGN Trigger: ATTTCCAACCCTTAGTGAGGACAGGTGTGACTCCCAGTTGTACTGAGAAAACCTATGTAAAGACTTAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | GTGTCTCAATTCATAACCCAAGCTAGCTCCAAACTCTaGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSQFITQASSKL*PLVFLSQLPEK Trigger: TTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAGTTTGGAGCTAGCTTGGGTTATGAATTGAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CCA 72 bp | ACAGAAAACCTAAAGGCTCTTGCATATTACAGATGTTaGGTCATGTTTTTGAAGATGATCTTGCTATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TENLKALAYYRC*VMFLKMILLSA Trigger: AGCTGATAGCAAGATCATCTTCAAAAACATGACCCAACATCTGTAATATGCAAGAGCCTTTAGGTTTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | TGGCCATGGCAGCAGTACAGAAGGACCAGGGAAGACTaGCAGCTGCCACAGCAACAGCAGCCAGGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WPWQQYRRTRED*QLPQQQQPGWQ Trigger: CTGCCAGCCTGGCTGCTGTTGCTGTGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCCATGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | GAAAAAGCGGCCGTGTTCCGCTCTATGAACTCCGCTTaGGGGAGGAGCCCGTGGCTGGTTGGAAATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKAAVFRSMNSA*GRSPWLVGNEL Trigger: GAGCTCATTTCCAACCAGCCACGGGCTCCTCCCCAAAGCGGAGTTCATAGAGCGGAACACGGCCGCTTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | GTTTGGGGAGTTGGGGCTTTAAGGAGGCAACGGATCATGGGAGACTATACAGAATGCCCCAGCGGCAGCTaGTGCCTGACAACTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGVGALRRQRIMGDYTECPSGS*CLTTGL Trigger: CAGACCAGTTGTCAGGCATCAGCTGCCGCTGGGGCA...TTCTGTATAGTCTCCCATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAAGCGGGTGTGGGGAGGGAGCACTGATTCTGTAGTACAGCCCTCGGGACTTTCCCATTTCTGTTaGTCCAGTCTGCATTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGKRVWGGSTDSVVQPSGLSHFC*SSLHSG Trigger: TCCAGAATGCAGACTGGACCAACAGAAATGGGAAAG...TCCCGAGGGCTGTACTACAGAATCAGTGCTCCCTCCCCACACCCGCTTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCCAACCGGACACCTTTTACTaGGGGATTCGGGTATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFHTGHTDSGGLFLCSAQPDTFY*GIRVSD Trigger: GTCGGATACCCGAATCCCTCAGTAAAAGGTGTCCGG...TTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCTTCAGCCCTCTGTCCTaGGAAAGGAGGCTTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFHTGHTDSGGLFLCSAFSPLS*ERRLSC Trigger: GCAACTAAGCCTCCTTTCTCAGGACAGAGGGCTGAA...GGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCGGCTCTTTTAACACTTaGAGCTCTGCGGGGACATCG | + |
|
Preference number: 4 (lower is better) Translates to: WLEMSSLWQMWCCGLCSSGSFNT*SSAGTS Trigger: CGATGTCCCCGCAGAGCTCCAAGTGTTAAAAGAGCC...GCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | AAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTGGATATCGCCATGCCAGGAAAGGGAACGTaGGCTGCTGTAGGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHNAVTLTLIDSWVDIAMPGKGT*AAVGAL Trigger: AAGAGCCCCTACAGCAGCCCACGTTCCCTTTCCTGG...CATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | GGTAACTGGCCATGGCAGCAGTACAGAAGGACCAGGGAAGACTTGCAGCTGCCATCACACAGCTGCATCTaGATGTGCAACATCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNWPWQQYRRTREDLQLPSHSCI*MCNIRW Trigger: CCACCTGATGTTGCACATCCAGATGCAGCTGTGTGA...TGGCAGCTGCAAGTCTTCCCTGGTCCTTCTGTACTGCTGCCATGGCCAGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | AGGAGGTGGGAGGAAGAGGCTTCATTTAGTCCAGTCTaGGGTCATGGAAGGGTTGAGGGAAAGGAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRWEEEASFSPV*GHGRVEGKEAG Trigger: CCCAGCTTCCTTTCCCTCAACCCTTCCATGACCCAAGACTGGACTAAATGAAGCCTCTTCCTCCCACCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 72 bp | ATCTCCCTCAGCCTCACGTCCAGAGTGAAGAGATCCTaGCCCTGGGCAAGCAATGGAACGTCTAGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLSLTSRVKRS*PWASNGTSSFW Trigger: CCAGAAACTAGACGTTCCATTGCTTGCCCAGGGCAAGGATCTCTTCACTCTGGACGTGAGGCTGAGGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| CDS-3UTR GCA 90 bp | TGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCCCAACAATATTGGGATaGTGGAGACCTGCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: WLEMSSLWQMWCCGLCSSPTILG*WRPART Trigger: GGTTCTGGCAGGTCTCCAGCATCCCAATATTGTTGG...GCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| CDS-3UTR CCA 90 bp | CCCTCATCGATAGCTGGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCAGACAAGTCCCCACTCTaGATGTGTGTGTCCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSSIAGWISPCFSFEKAADKSPL*MCVSVF Trigger: GAACACGGACACACACATCCAGAGTGGGGACTTGTC...TGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| CDS-3UTR CCA 90 bp | TCCCTCTTCCACACAGGACACACTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCGGAGCTGGATATACTTaGCTTGCACCGGACACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFHTGHTDSGGLFLCSAGAGYT*LAPDTF Trigger: AAAGGTGTCCGGTGCAAGCCAAGTATATCCAGCTCC...GGCACTGCAAAGGAAAAGGCCACCAGAGTCAGTGTGTCCTGTGTGGAAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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| 3UTR CAA 72 bp | GGCGTCAGAGATTGCTATCTGAGGACTTCAGGTGGTTaGGGGAGTTGGGGCTTTAAGGAGGCAACGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVRDCYLRTSGG*GSWGFKEATDH Trigger: ATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAACCACCTGAAGTCCTCAGATAGCAATCTCTGACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACAGTCTGCATTCTGGATaGTGTCTGCACAGGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLREGSSKEKAAVFRSMNSLHSG*CLHRPD Trigger: GTCTGGCCTGTGCAGACATCATCCAGAATGCAGACT...GTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | TGGTTGGAAATGAGCTCACTGTGGCAGATGTGGTGCTGTGGTCTGTGCTCCAGCACCTCATTAAATGAGTaGTGGCTCTGTTGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLEMSSLWQMWCCGLCSSTSLNE*WLCCGG Trigger: TCCACCACAACAGAGCCATCACTCATTTAATGAGGT...GCTGGAGCACAGACCACAGCACCACATCTGCCACAGTGAGCTCATTTCCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | AAGCATAATGCTGTCACCCTCACCCTCATCGATAGCTGGGTGGATATCGCCATGGGTAGCCAACAATATTaGGATGCTGGAGACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHNAVTLTLIDSWVDIAMGSQQY*DAGDLP Trigger: TGGCAGGTCTCCAGCATCCCAATATTGTTGGCTACC...CATGGCGATATCCACCCAGCTATCGATGAGGGTGAGGGTGACAGCATTATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | GAGAAGGGAACATCGCACGTTTCCTGTTCTCTCTGTTaGGCCAGAAGCATAATGCTGTCACCCTCACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKGTSHVSCSLC*ARSIMLSPSPS Trigger: TGAGGGTGAGGGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGATGTTCCCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGCCTTTGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTCTGCACATGGGGTCCGACACCTCTaGGGGGAAGTCGATGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGLWFSYLNFQRKNSAHGVRHL*GEVDGR Trigger: CCTGCCATCGACTTCCCCGCAGAGGTGTCGGACCCC...ATGTGCAGAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR GCA 90 bp | TCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCACCAGCAGGTTCAAGTTaGCTTCAGAAGACTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHVSCSLCLARSIMLSPSPAGSS*LQKTHP Trigger: CGGATGAGTCTTCTGAAGGCAACTTGAACCTGCTGG...TGAGGGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | CCCTTCAGCTCCTTAAGTGAATTCGAGCAGCTTGTCTaGCAGGGTTCAACAGAAGAATGGTACGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSSLSEFEQLV*QGSTEEWYGFQ Trigger: CTGGAAGCCGTACCATTCTTCTGTTGAACCCTGCAAGACAAGCTGCTCGAATTCACTTAAGGAGCTGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | TCGCACGTTTCCTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCACCCTCAGCAGACCTCATTAAATaGGTGATGGCTCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHVSCSLCLARSIMLSPSADLIK*VMALLW Trigger: CCACAACAGAGCCATCACTCATTTAATGAGGTCTGC...TGAGGGTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAGGAAACGTGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCGAGAAGGCAGCAGTAAAGAAAAAGCGGCCGTGTTCCGCTCTATGAACTTTCTTTTTCTGGGGTaGGTTCAGCAAAGACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLREGSSKEKAAVFRSMNFLFLG*VQQRQW Trigger: CCATTGTCTTTGCTGAACTCACCCCAGAAAAAGAAA...GTTCATAGAGCGGAACACGGCCGCTTTTTCTTTACTGCTGCCTTCTCGAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR GCA 90 bp | ATGTACATTCCTATTGACTATAATGCAAGTCCACTTTCACATGCTTGGCGGCATGGGATGCTGGAGACCTaGCAGAACCTTCACTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MYIPIDYNASPLSHAWRHGMLET*QNLHFP Trigger: CGGGAAGTGAAGGTTCTGGCAGGTCTCCAGCATCCC...ATGCCGCCAAGCATGTGAAAGTGGACTTGCATTATAGTCAATAGGAATGTACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCATCGATAGCTGGGTGGATATCGCCATGTTTCAGCTTCGAGAAGGCAGCACTATCTCTCTGGATCTaGTTTTCTGCATGTAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSIAGWISPCFSFEKAALSLWI*FSACKN Trigger: ATTCTTACATGCAGAAAATCAGATCCAGAGAGATAG...TGCTGCCTTCTCGAAGCTGAAACATGGCGATATCCACCCAGCTATCGATGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | TATTTTGAGACAGTGTCTCAATTCATAACCCAAGCTAGCTCCAAACTCTGGCCTGTCCAGTCTGCATTCTaGATGATGTCTGCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YFETVSQFITQASSKLWPVQSAF*MMSAQA Trigger: GGCCTGTGCAGACATCATCCAGAATGCAGACTGGAC...AGGCCAGAGTTTGGAGCTAGCTTGGGTTATGAATTGAGACACTGTCTCAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGTAGATCTCTTGAGTTTGAGACCAGCCTAGATTACAGGTTTTTCTTTTTCTaGGGTGAGTTCAGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWEAEAGRSLEFETSLDYRFFFF*GEFSKD Trigger: GTCTTTGCTGAACTCACCCCAGAAAAAGAAAAACCT...GTAATCTAGGCTGGTCTCAAACTCAAGAGATCTACCTGCCTCTGCCTCCCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | CTCCTGCCTGAGCTTCATTTAGGTAGAAACACATTATaGCCTGTCACCCGTTCAGTGATACCTGTCCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPELHLGRNTL*PVTRSVIPVLF Trigger: AAATAGGACAGGTATCACTGAACGGGTGACAGGCAATAATGTGTTTCTACCTAAATGAAGCTCAGGCAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | CCTGTCCTCACTAAGGGTTGGAAATGTACATTCCTATaGACTATAATGCAAGTCCACTTTCACATGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVLTKGWKCTFL*TIMQVHFHMLG Trigger: GCCAAGCATGTGAAAGTGGACTTGCATTATAGTCAATAGGAATGTACATTTCCAACCCTTAGTGAGGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR TCA 90 bp | ATGTACATTCCTATTGACTATAATGCAAGTCCACTTTCACATGCTTGGCGGCATACATTTCCAGTTGTTTaGAAAAGCTCACTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MYIPIDYNASPLSHAWRHTFPVV*KSSLCS Trigger: GCTGCAGAGTGAGCTTTTTCAAACAACTGGAAATGT...ATGCCGCCAAGCATGTGAAAGTGGACTTGCATTATAGTCAATAGGAATGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | AATGGTACGGCTTCCAGTCTGTTGTCAGAAAGGGACTaGTCCAATAAAGTACCATATCATCTATGGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NGTASSLLSERD*SNKVPYHLWSL Trigger: TAAACTCCATAGATGATATGGTACTTTATTGGACAAGTCCCTTTCTGACAACAGACTGGAAGCCGTACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | CAATTCATAACCCAAGCTAGCTCCAAACTCTGGCCTTaGGTTTTCTTATCTCAACTTCCAGAGAAAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QFITQASSKLWP*VFLSQLPEKEF Trigger: GAATTCTTTCTCTGGAAGTTGAGATAAGAAAACCAAAGGCCAGAGTTTGGAGCTAGCTTGGGTTATGAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| 3UTR CAA 72 bp | AACAGAAAACCTAAAGGCTCTTGCATATTACAGATGTaGGGTCATGTTTTTGAAGATGATCTTGCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRKPKGSCILQM*GHVFEDDLAIS Trigger: GCTGATAGCAAGATCATCTTCAAAAACATGACCCAACATCTGTAATATGCAAGAGCCTTTAGGTTTTCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAAGCGGGTGTGGGGAGGGAGCACTGATTCTGTAGTACAGCCCTCGGGATCGGACTCATCATACTaGGGGTCCGACACCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGKRVWGGSTDSVVQPSGSDSSY*GSDTSA Trigger: CGCAGAGGTGTCGGACCCCAAGTATGATGAGTCCGA...TCCCGAGGGCTGTACTACAGAATCAGTGCTCCCTCCCCACACCCGCTTGCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CCA 90 bp | ATCCCTCCAGCTGTTCCGGTGATGCGTAGAGACAAGTCCCCACTCTaGATGTGTGTGTCCGTGTTCCTTTCCCATTTCTGTTGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IPPAVPVMRRDKSPL*MCVSVFLSHFCWSS Trigger: ACTGGACCAACAGAAATGGGAAAGGAACACGGACACACACATCCAGAGTGGGGACTTGTCTCTACGCATCACCGGAACAGCTGGAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGGAGTTGGGGCTTTAAGGAGGCAACGGATCATGGGAGACTATACAGAACCCAGCAGGTTCAAGTaGCCTTCAGAAGACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VWGVGALRRQRIMGDYTEPSRFK*PSEDSS Trigger: GGATGAGTCTTCTGAAGGCAACTTGAACCTGCTGGG...TTCTGTATAGTCTCCCATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | CTGACTCTGGTGGCCTTTTCCTTTGCAGTGCCCAAGACACAGATGAAGTTCAGTAGGAGCTGGATATACTaGGCTTGCACCGGACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTLVAFSFAVPKTQMKFSRSWIY*ACTGHL Trigger: AAGGTGTCCGGTGCAAGCCAAGTATATCCAGCTCCT...ACTGAACTTCATCTGTGTCTTGGGCACTGCAAAGGAAAAGGCCACCAGAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | CACAGTGCTTCGAAGCAGAACTCTGACCTTCCAGGCAGTACAGAGCCCACAGACCATGTAAGAATTATCTaGACAAGGATCCTGACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSASKQNSDLPGSTEPTDHVRII*TRILTD Trigger: GTCCGTCAGGATCCTTGTCAAGATAATTCTTACATG...GTCTGTGGGCTCTGTACTGCCTGGAAGGTCAGAGTTCTGCTTCGAAGCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | GTTTGGGGAGTTGGGGCTTTAAGGAGGCAACGGATCATGGGAGACTATACAGAACCTTTCCCATTTCTGTaGGTCCAGTCTGCATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VWGVGALRRQRIMGDYTEPFPFL*VQSAFW Trigger: CCAGAATGCAGACTGGACCAACAGAAATGGGAAAGG...TTCTGTATAGTCTCCCATGATCCGTTGCCTCCTTAAAGCCCCAACTCCCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS-3UTR CAA 90 bp | ATTGCCTGTCACCCGTTCAGTGATACCTGTCCTATTTTGAGACAGTGTCTCAATAACATTTCCAGTTGTTaGAAAAAGCTCACTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IACHPFSDTCPILRQCLNNISSC*KKLTLQ Trigger: CTGCAGAGTGAGCTTTTTCAAACAACTGGAAATGTT...ATTGAGACACTGTCTCAAAATAGGACAGGTATCACTGAACGGGTGACAGGCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS GCA 72 bp | GACATCGGACTCATCATACTTGGGGTCCGACACCTCTaGGGGGAAGTCGATGGCAGGAGGCGCGGCCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: DIGLIILGVRHL*GEVDGRRRGHR Trigger: GCGGTGGCCGCGCCTCCTGCCATCGACTTCCCCGCAGAGGTGTCGGACCCCAAGTATGATGAGTCCGATGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CCA 72 bp | CTTGGAGCTCTGCGGGGACATCGGACTCATCATACTTaGGGTCCGACACCTCTGCGGGGAAGTCGATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGALRGHRTHHT*GPTPLRGSRWQ Trigger: CTGCCATCGACTTCCCCGCAGAGGTGTCGGACCCCAAGTATGATGAGTCCGATGTCCCCGCAGAGCTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 72 bp | TCAAGTGTTCCAGTAAGGAGACGAGCAGCAGCTGGTTaGCCACCAGGAAAGGGAACGTGGGCTGCTGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSVPVRRRAAAG*PPGKGTWAAVG Trigger: CCCTACAGCAGCCCACGTTCCCTTTCCTGGTGGCAAACCAGCTGCTGCTCGTCTCCTTACTGGAACACTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS GCA 72 bp | TGGATGTGCAACATCAGGTGGTACCGAACCTCCGTCTaGCCCAGCAGGTTCAAGTTGCCTTCAGAAGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: WMCNIRWYRTSV*PSRFKLPSEDS Trigger: TGAGTCTTCTGAAGGCAACTTGAACCTGCTGGGGCAGACGGAGGTTCGGTACCACCTGATGTTGCACATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CCA 72 bp | GCTGTTCCGGTGATGCGTAGAGACAAGTCCCCACTCTaGATGTGTGTGTCCGTGTTCCTTTCCCATTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVPVMRRDKSPL*MCVSVFLSHFC Trigger: ACAGAAATGGGAAAGGAACACGGACACACACATCCAGAGTGGGGACTTGTCTCTACGCATCACCGGAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 72 bp | TGGTACCGAACCTCCGTCTGCCCCAGCAGGTTCAAGTaGCCTTCAGAAGACTCATCCGTGGATGTAAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: WYRTSVCPSRFK*PSEDSSVDVKF Trigger: GAATTTTACATCCACGGATGAGTCTTCTGAAGGCAACTTGAACCTGCTGGGGCAGACGGAGGTTCGGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 90 bp | AGCAAAGACAATGGACGAACTGCTTTCATTATCTTTAACACCACCTaGGTCTCTGTCCCCTTCCTGCTCCGACAGCACTTCGAGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKDNGRTAFIIFNTT*VSVPFLLRQHFERG Trigger: CCCTCTCTCGAAGTGCTGTCGGAGCAGGAAGGGGACAGAGACCAAGGTGGTGTTAAAGATAATGAAAGCAGTTCGTCCATTGTCTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 90 bp | ATGCCTGACAACTGGTCTGACGGACAAATCAGTCAAGCCGTCTTCTaGGAGCTCAATGGACGATTCACTTTCACTGCTGTTCCTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: MPDNWSDGQISQAVF*ELNGRFTFTAVPDH Trigger: GTGGTCAGGAACAGCAGTGAAAGTGAATCGTCCATTGAGCTCCAAGAAGACGGCTTGACTGATTTGTCCGTCAGACCAGTTGTCAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 90 bp | AACATCAGGTGGTACCGAACCTCCGTCTGCCCCAGCAGGTTCAAGTaGCCTTCAGAAGACTCATCCGTGGATGTAAAATTCCCTTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: NIRWYRTSVCPSRFK*PSEDSSVDVKFPSN Trigger: ATTGGAAGGGAATTTTACATCCACGGATGAGTCTTCTGAAGGCAACTTGAACCTGCTGGGGCAGACGGAGGTTCGGTACCACCTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 72 bp | AATGGACGAACTGCTTTCATTATCTTTAACACCACCTaGGTCTCTGTCCCCTTCCTGCTCCGACAGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: NGRTAFIIFNTT*VSVPFLLRQHF Trigger: GAAGTGCTGTCGGAGCAGGAAGGGGACAGAGACCAAGGTGGTGTTAAAGATAATGAAAGCAGTTCGTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
||
| CDS CAA 72 bp | AACTGGTCTGACGGACAAATCAGTCAAGCCGTCTTCTaGGAGCTCAATGGACGATTCACTTTCACTGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: NWSDGQISQAVF*ELNGRFTFTAV Trigger: AACAGCAGTGAAAGTGAATCGTCCATTGAGCTCCAAGAAGACGGCTTGACTGATTTGTCCGTCAGACCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100487.6 |
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