Pregenerated sensors for EIF2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027810Ensembl transcript IDs: ENSMUST00000029387.15, ENSMUST00000135876.8, ENSMUST00000138848.2, ENSMUST00000154219.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCACCAGAAGCAGACTGGGTGACCGTGTTCCGTGGTGCACTCTGTaGGACAGGAGTAGGAGCCGCATCACTTCTTGCTTCCTGTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: ITRSRLGDRVPWCTL*DRSRSRITSCFLFC Trigger: GCAAAACAGGAAGCAAGAAGTGATGCGGCTCCTACTCCTGTCCCACAGAGTGCACCACGGAACACGGTCACCCAGTCTGCTTCTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR GCA 90 bp | CAGCATTGTAACCTTATCAGCTTTAAAGAAGCTTTTATTGGCCAGTaGTGCCTGAGGTCCGGCAAAGTTGGGATACTGATACAGTCGAAC | + |
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Preference number: 1 (lower is better) Translates to: QHCNLISFKEAFIGQ*CLRSGKVGILIQSN Trigger: GTTCGACTGTATCAGTATCCCAACTTTGCCGGACCTCAGGCAGCACTGGCCAATAAAAGCTTCTTTAAAGCTGATAAGGTTACAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR CCA 90 bp | GTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTaGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTGACTGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: VFDNGLSLPGCGFIF*GGSSSCSLELVTGL Trigger: TAAGCCAGTCACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR GCA 90 bp | CATTGTAACCTTATCAGCTTTAAAGAAGCTTTTATTGGCCAGTGCTaGCTGAGGTCCGGCAAAGTTGGGATACTGATACAGTCGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: HCNLISFKEAFIGQC*LRSGKVGILIQSNK Trigger: TTTGTTCGACTGTATCAGTATCCCAACTTTGCCGGACCTCAGGCAGCACTGGCCAATAAAAGCTTCTTTAAAGCTGATAAGGTTACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGGAGGTTTGGCCAGTGCTGCCTaGGGTCCGGCAAAGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VFDNGLSLPGCGFIFWGGLASAA*GPAKLG Trigger: TCCCAACTTTGCCGGACCTCAGGCAGCACTGGCCAA...ACCTCCCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGAGCACATGTGGCTGTTAAGATATGCTCACCATCTGGGCACCAGGCAAAATATAGAAGGCTGCGTTaGGAGGACCAGTCCCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LGAHVAVKICSPSGHQAKYRRLR*EDQSQS Trigger: ACTTTGGGACTGGTCCTCGCAACGCAGCCTTCTATA...TTTTGCCTGGTGCCCAGATGGTGAGCATATCTTAACAGCCACATGTGCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTTATAGAAGGCTGCGTTaGGAGGACCAGTCCCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SWMWLHILGRFLFMQFGIYRRLR*EDQSQS Trigger: ACTTTGGGACTGGTCCTCGCAACGCAGCCTTCTATA...AATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACATCATACAGGGCTATAGAAGGCTaGGTTGCGAGGACCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KNGCQETCHNSPFDGTSYRAIEG*VARTSP Trigger: GGGACTGGTCCTCGCAACGCAGCCTTCTATAGCCCT...GTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGGAGTAAGGCTGCCACGTTaGCAGGACAGTGTTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: AVFDNGLSLPGCGFIFWGVRLPR*QDSVIW Trigger: CCAAATAACACTGTCCTGGCAACGTGGCAGCCTTAC...TCCCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135876.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGTTCTCCATAGTAGGAGGCTCCTGTCTTGTCAACCTCTGTACTGGCTATGGCACCTTTACTTCCTaGGACATAAACTGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: CLFSIVGGSCLVNLCTGYGTFTS*DINCHL Trigger: AAGGTGGCAGTTTATGTCCCAGGAAGTAAAGGTGCC...ATAGCCAGTACAGAGGTTGACAAGACAGGAGCCTCCTACTATGGAGAACAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTTCCTGGGACATAAACTaGCACCTTATAAGGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: WMWLHILGRFLFMQFGIGSWDIN*HLIRLG Trigger: ACCCAACCTTATAAGGTGGCAGTTTATGTCCCAGGA...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCACATCATACTTATGCAAAAGAGAGCCAGTATAATGCCAGATCTTATACCCGCTTTTATTGGCCAGTaGTGCCTGAGGTCCGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: WHIILMQKRASIMPDLIPAFIGQ*CLRSGK Trigger: TTTGCCGGACCTCAGGCAGCACTGGCCAATAAAAGC...GGGTATAAGATCTGGCATTATACTGGCTCTCTTTTGCATAAGTATGATGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATGGCACATCATACTTATGCAAAAGAGAGCCAGTATAATGCCAGATCTTATAGGGCTATAGAAGGCTaGGTTGCGAGGACCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LMAHHTYAKESQYNARSYRAIEG*VARTSP Trigger: GGGACTGGTCCTCGCAACGCAGCCTTCTATAGCCCT...ATAAGATCTGGCATTATACTGGCTCTCTTTTGCATAAGTATGATGTGCCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCCAAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACAGGCACCTTTACTTCCTaGGACATAAACTGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: PSKNGCQETCHNSPFDGTGTFTS*DINCHL Trigger: AAGGTGGCAGTTTATGTCCCAGGAAGTAAAGGTGCC...TGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGTTCTCCATAGTAGGAGGCTCCTGTCTTGTCAACCTCTGTACTGGCTATGCAAAGTTGGGATACTaGTACAGTCGAACAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: CLFSIVGGSCLVNLCTGYAKLGY*YSRTNE Trigger: CTCATTTGTTCGACTGTATCAGTATCCCAACTTTGC...ATAGCCAGTACAGAGGTTGACAAGACAGGAGCCTCCTACTATGGAGAACAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCCAAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACATCCTGGGACATAAACTaGCACCTTATAAGGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PSKNGCQETCHNSPFDGTSWDIN*HLIRLG Trigger: ACCCAACCTTATAAGGTGGCAGTTTATGTCCCAGGA...TGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTCAGGTTGAAAACTGTTaGTTTCGCAGGCATAAAACC | + |
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Preference number: 2 (lower is better) Translates to: WMWLHILGRFLFMQFGIGQVENC*FRRHKT Trigger: GGTTTTATGCCTGCGAAAGCAACAGTTTTCAACCTG...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGGGCTGCCAAGAAACCTaGCATAATTCTCCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GLFLIMACHFLDVASYSGGCQET*HNSPFD Trigger: ATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCC...CCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTCCATCCAAAAATGGCTaGCAAGAAACCTGCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: WMWLHILGRFLFMQFGIGPSKNG*QETCHN Trigger: ATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGG...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTTATTCCATCCAAAAATaGCTGCCAAGAAACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: WMWLHILGRFLFMQFGIGYSIQK*LPRNLP Trigger: TGGCAGGTTTCTTGGCAGCCATTTTTGGATGGAATA...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCACTTTCTGTGAGTCTTCAAACTCCCAATTCCAAATCTTCAAGCTCTTGGGTGGCTGTTAAGATATaGTCACCATCTGGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: NSLSVSLQTPNSKSSSSWVAVKI*SPSGHQ Trigger: CTGGTGCCCAGATGGTGAGCATATCTTAACAGCCAC...CCAAGAGCTTGAAGATTTGGAATTGGGAGTTTGAAGACTCACAGAAAGTGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGGAGGTGGCTGCCAAGAAACCTaGCATAATTCTCCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VFDNGLSLPGCGFIFWGGGCQET*HNSPFD Trigger: ATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCC...ACCTCCCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGTTCTCCATAGTAGGAGGCTCCTGTCTTGTCAACCTCTGTACTGGCTATAATAATTTCATCATCTaGCCAGGAAGGACACCAATT | + |
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Preference number: 2 (lower is better) Translates to: CLFSIVGGSCLVNLCTGYNNFII*PGRTPI Trigger: AATTGGTGTCCTTCCTGGTCAGATGATGAAATTATT...ATAGCCAGTACAGAGGTTGACAAGACAGGAGCCTCCTACTATGGAGAACAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGAATAATTTCATCATCTaGCCAGGAAGGACACCAATT | + |
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Preference number: 2 (lower is better) Translates to: GLFLIMACHFLDVASYSGNNFII*PGRTPI Trigger: AATTGGTGTCCTTCCTGGTCAGATGATGAAATTATT...CCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACATCATACGATCACACTTCAGGTTaGAAACTGTTGCTTTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: KNGCQETCHNSPFDGTSYDHTSG*KLLLSQ Trigger: CTGCGAAAGCAACAGTTTTCAACCTGAAGTGTGATC...GTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCACATCATACTTATGCAAAAGAGAGCCAGTATAATGCCAGATCTTATACCCGATCACACTTCAGGTTaGAAACTGTTGCTTTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: WHIILMQKRASIMPDLIPDHTSG*KLLLSQ Trigger: CTGCGAAAGCAACAGTTTTCAACCTGAAGTGTGATC...GGGTATAAGATCTGGCATTATACTGGCTCTCTTTTGCATAAGTATGATGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR CAA 90 bp | TTCCATCCAAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTaGATGGCACATCATACTTATGCAAAAGAGAGCCAGTATAATGCC | + |
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Preference number: 2 (lower is better) Translates to: FHPKMAAKKPAIILH*MAHHTYAKESQYNA Trigger: GGCATTATACTGGCTCTCTTTTGCATAAGTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCGCAAAGTTGGGATACTaGTACAGTCGAACAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFAKLGY*YSRTNE Trigger: CTCATTTGTTCGACTGTATCAGTATCCCAACTTTGC...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACATCATACCAGGTTGAAAACTGTTaGTTTCGCAGGCATAAAACC | + |
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Preference number: 2 (lower is better) Translates to: KNGCQETCHNSPFDGTSYQVENC*FRRHKT Trigger: GGTTTTATGCCTGCGAAAGCAACAGTTTTCAACCTG...GTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCACTTTCTGTGAGTCTTCAAACTCCCAATTCCAAATCTTCAAGCTCTTGGCCATCCAAAAATGGCTaGCAAGAAACCTGCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: NSLSVSLQTPNSKSSSSWPSKNG*QETCHN Trigger: ATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGG...CCAAGAGCTTGAAGATTTGGAATTGGGAGTTTGAAGACTCACAGAAAGTGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154219.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCACTAGGCACTTCACTTaGAACTGCTTGGTACTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFTRHFT*NCLVLY Trigger: ATAAAGTACCAAGCAGTTCCAAGTGAAGTGCCTAGT...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CCA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCAGAATCAGAAGCCACTaGCTTAGAAATAAGCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFRIRSH*LRNKLV Trigger: TACAAGCTTATTTCTAAGCCAGTGGCTTCTGATTCT...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCACTTTCTGTGAGTCTTCAAACTCCCAATTCCAAATCTTCAAGCTCTTGGGCTTATAGTGTTTCCTaGCAACAAATTCACTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: NSLSVSLQTPNSKSSSSWAYSVS*QQIHFL Trigger: CAGAAAGTGAATTTGTTGGCAGGAAACACTATAAGC...CCAAGAGCTTGAAGATTTGGAATTGGGAGTTTGAAGACTCACAGAAAGTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154219.8 |
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| 3UTR CCA 72 bp | AGCAGACTGGGTGACCGTGTTCCGTGGTGCACTCTGTaGGACAGGAGTAGGAGCCGCATCACTTCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: SRLGDRVPWCTL*DRSRSRITSCF Trigger: GAAGCAAGAAGTGATGCGGCTCCTACTCCTGTCCCACAGAGTGCACCACGGAACACGGTCACCCAGTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR CCA 72 bp | TTTTATTGGCCAGTGCTGCCTGAGGTCCGGCAAAGTTaGGATACTGATACAGTCGAACAAATGAGGGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: FYWPVLPEVRQS*DTDTVEQMRGH Trigger: GTGCCCCCTCATTTGTTCGACTGTATCAGTATCCCAACTTTGCCGGACCTCAGGCAGCACTGGCCAATAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGGAGCACATGTGGCTGTTAAGATATGCTCACCATCTGGGCACCAGGCAAAATGTAAGGCTGCCACGTaGCCAGGACAGTGTTATTTG | + |
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Preference number: 3 (lower is better) Translates to: LGAHVAVKICSPSGHQAKCKAAT*PGQCYL Trigger: CAAATAACACTGTCCTGGCAACGTGGCAGCCTTACA...TTTTGCCTGGTGCCCAGATGGTGAGCATATCTTAACAGCCACATGTGCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135876.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGGAGCACATGTGGCTGTTAAGATATGCTCACCATCTGGGCACCAGGCAAAAAATGTAGTGCAGTGTTaGTTCTCCATAGTAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LGAHVAVKICSPSGHQAKNVVQC*FSIVGG Trigger: GCCTCCTACTATGGAGAACAAACACTGCACTACATT...TTTTGCCTGGTGCCCAGATGGTGAGCATATCTTAACAGCCACATGTGCTCCTAG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR CCA 72 bp | AATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTaGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTG | + |
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Preference number: 3 (lower is better) Translates to: NGLSLPGCGFIF*GGSSSCSLELV Trigger: CACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTAATGTAGTGCAGTGTTaGTTCTCCATAGTAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SWMWLHILGRFLFMQFGINVVQC*FSIVGG Trigger: GCCTCCTACTATGGAGAACAAACACTGCACTACATT...AATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | ATATATGTCCATGAGGGCTATAGAAGGCTGCGTTGCGAGGACCAGTCCCAAAGTAAATTGGGCCATTTTTaGGTAATTGTACCACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: IYVHEGYRRLRCEDQSQSKLGHF*VIVPQH Trigger: GTGCTGTGGTACAATTACCAAAAAATGGCCCAATTT...ACTTTGGGACTGGTCCTCGCAACGCAGCCTTCTATAGCCCTCATGGACATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR GCA 72 bp | CTTATCAGCTTTAAAGAAGCTTTTATTGGCCAGTGCTaGCTGAGGTCCGGCAAAGTTGGGATACTGATACAG | + |
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Preference number: 3 (lower is better) Translates to: LISFKEAFIGQC*LRSGKVGILIQ Trigger: CTGTATCAGTATCCCAACTTTGCCGGACCTCAGGCAGCACTGGCCAATAAAAGCTTCTTTAAAGCTGATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTAAATTGGGCCATTTTTaGGTAATTGTACCACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: WMWLHILGRFLFMQFGIGKLGHF*VIVPQH Trigger: GTGCTGTGGTACAATTACCAAAAAATGGCCCAATTT...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | TGGATGTGGCTTCATATTCTGGGGAGGTTCCTCTTCATGCAGTTTGGAATTGGTATCCCATACTTCCATTaGTCCTCGAAGATTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: WMWLHILGRFLFMQFGIGIPYFH*SSKISK Trigger: TTTGGAAATCTTCGAGGACAAATGGAAGTATGGGAT...ACCAATTCCAAACTGCATGAAGAGGAACCTCCCCAGAATATGAAGCCACATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGTTCACTTGGAACTGCTaGGTACTTTATCGTTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: GLFLIMACHFLDVASYSGFTWNC*VLYRFC Trigger: GCAAAAACGATAAAGTACCAAGCAGTTCCAAGTGAA...CCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACATCATACGGATCACACTTCAGGTaGAAAACTGTTGCTTTCGCA | + |
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Preference number: 3 (lower is better) Translates to: KNGCQETCHNSPFDGTSYGSHFR*KTVAFA Trigger: TGCGAAAGCAACAGTTTTCAACCTGAAGTGTGATCC...GTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCCAAAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTTGATGGCACAATCCCATACTTCCATTaGTCCTCGAAGATTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: PSKNGCQETCHNSPFDGTIPYFH*SSKISK Trigger: TTTGGAAATCTTCGAGGACAAATGGAAGTATGGGAT...TGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | TTGATGGCACATCATACTTATGCAAAAGAGAGCCAGTATAATGCCAGATCTTATGGATCACACTTCAGGTaGAAAACTGTTGCTTTCGCA | + |
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Preference number: 3 (lower is better) Translates to: LMAHHTYAKESQYNARSYGSHFR*KTVAFA Trigger: TGCGAAAGCAACAGTTTTCAACCTGAAGTGTGATCC...ATAAGATCTGGCATTATACTGGCTCTCTTTTGCATAAGTATGATGTGCCATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCGGTACTTTATCGTTTTaGCTGGAAATATTCCATCCA | + |
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Preference number: 3 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFGTLSF*LEIFHP Trigger: TGGATGGAATATTTCCAGCAAAAACGATAAAGTACC...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS-3UTR CCA 90 bp | ATATATGTCCATGAGGGCTATAGAAGGCTGCGTTGCGAGGACCAGTCCCAAAGTGCTTTCTGTGAAGTGTaGTGGTCCATTCACCATGTA | + |
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Preference number: 4 (lower is better) Translates to: IYVHEGYRRLRCEDQSQSAFCEV*WSIHHV Trigger: TACATGGTGAATGGACCACCACACTTCACAGAAAGC...ACTTTGGGACTGGTCCTCGCAACGCAGCCTTCTATAGCCCTCATGGACATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS-3UTR CCA 90 bp | TGTTTGTTCTCCATAGTAGGAGGCTCCTGTCTTGTCAACCTCTGTACTGGCTATTTCTGTGAAGTGTGGTaGTCCATTCACCATGTACAG | + |
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Preference number: 4 (lower is better) Translates to: CLFSIVGGSCLVNLCTGYFCEVW*SIHHVQ Trigger: CTGTACATGGTGAATGGACCACCACACTTCACAGAA...ATAGCCAGTACAGAGGTTGACAAGACAGGAGCCTCCTACTATGGAGAACAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTGGGGCTTTCTGTGAAGTGTaGTGGTCCATTCACCATGTA | + |
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Preference number: 4 (lower is better) Translates to: GLFLIMACHFLDVASYSGAFCEV*WSIHHV Trigger: TACATGGTGAATGGACCACCACACTTCACAGAAAGC...CCCAGAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS-3UTR CCA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCTTCTGTGAAGTGTGGTaGTCCATTCACCATGTACAG | + |
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Preference number: 4 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFFCEVW*SIHHVQ Trigger: CTGTACATGGTGAATGGACCACCACACTTCACAGAA...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| 3UTR CAA 72 bp | AAAATGGCTGCCAAGAAACCTGCCATAATTCTCCATTaGATGGCACATCATACTTATGCAAAAGAGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KMAAKKPAIILH*MAHHTYAKESQ Trigger: CTGGCTCTCTTTTGCATAAGTATGATGTGCCATCAAATGGAGAATTATGGCAGGTTTCTTGGCAGCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS-3UTR GCA 90 bp | TTAAGGGCTGTTTTTGATAATGGCTTGTCACTTCCTGGATGTGGCTTCATATTCAGAAGTTTTCTCCATTaGTCCAGGCAAACAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: LRAVFDNGLSLPGCGFIFRSFLH*SRQTMS Trigger: GGACATTGTTTGCCTGGAGCAATGGAGAAAACTTCT...GAATATGAAGCCACATCCAGGAAGTGACAAGCCATTATCAAAAACAGCCCTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154219.8 |
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| CDS GCA 90 bp | TTTGGTGAGAATTCAAGGCAAACTGCTTTTGGGAGGTCGAAGGAGTaGAGTAGTCCCTTGTTAGCGACATTGATTATATTTACTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FGENSRQTAFGRSKE*SSPLLATLIIFTFS Trigger: AGAAAAAGTAAATATAATCAATGTCGCTAACAAGGGACTACTGCACTCCTTCGACCTCCCAAAAGCAGTTTGCCTTGAATTCTCACCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029387.15 ENSMUST00000138848.2 |
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| CDS TCA 72 bp | GAAGTGTGGTGGTCCATTCACCATGTACAGTCCCTCTaGTCCTCTGACTGTCAACAGCGGTGTGGACGGCGC | + |
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Preference number: 6 (lower is better) Translates to: EVWWSIHHVQSL*SSDCQQRCGRR Trigger: GCGCCGTCCACACCGCTGTTGACAGTCAGAGGATCAGAGGGACTGTACATGGTGAATGGACCACCACACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029387.15 ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS TCA 72 bp | TTCTTCCAGATTCTCTGGGAAGCACCGTGCTTTCTGTaGAGTGTGGTGGTCCATTCACCATGTACAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: FFQILWEAPCFL*SVVVHSPCTVP Trigger: AGGGACTGTACATGGTGAATGGACCACCACACTTCACAGAAAGCACGGTGCTTCCCAGAGAATCTGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029387.15 ENSMUST00000135876.8 ENSMUST00000154219.8 |
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| CDS CAA 90 bp | TCAAGGCAAACTGCTTTTGGGAGGTCGAAGGAGTGCAGTAGTCCCTaGTTAGCGACATTGATTATATTTACTTTTTCTCCATTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRQTAFGRSKECSSP*LATLIIFTFSPLLQ Trigger: CTGGAGCAATGGAGAAAAAGTAAATATAATCAATGTCGCTAACAAGGGACTACTGCACTCCTTCGACCTCCCAAAAGCAGTTTGCCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029387.15 ENSMUST00000138848.2 |
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| CDS GCA 72 bp | AATTCAAGGCAAACTGCTTTTGGGAGGTCGAAGGAGTaGAGTAGTCCCTTGTTAGCGACATTGATTATATTT | + |
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Preference number: 6 (lower is better) Translates to: NSRQTAFGRSKE*SSPLLATLIIF Trigger: AAATATAATCAATGTCGCTAACAAGGGACTACTGCACTCCTTCGACCTCCCAAAAGCAGTTTGCCTTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029387.15 ENSMUST00000138848.2 |
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| CDS CAA 72 bp | ACTGCTTTTGGGAGGTCGAAGGAGTGCAGTAGTCCCTaGTTAGCGACATTGATTATATTTACTTTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TAFGRSKECSSP*LATLIIFTFSP Trigger: TGGAGAAAAAGTAAATATAATCAATGTCGCTAACAAGGGACTACTGCACTCCTTCGACCTCCCAAAAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029387.15 ENSMUST00000138848.2 |
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