Pregenerated sensors for EIF1AD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092019Ensembl transcript IDs: ENSMUST00000164838.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS-3UTR TCA 90 bp | AATGTCAAGATGCCAATTGTGTTGAGTAATCTTCAGAGAACTTGGAATATAGCAATGTGTCCATTTCATTaGTTTTGGCATGTTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: NVKMPIVLSNLQRTWNIAMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAATGGACACAT...TGCTATATTCCAAGTTCTCTGAAGATTACTCAACACAATTGGCATCTTGACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164838.3 |
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CDS-3UTR CAA 90 bp | AATGTCAAGATGCCAATTGTGTTGAGTAATCTTCAGAGAACTTGGAATATAGCACACCATCAAAACACATaGCTTCCAACCATCCACATC | + |
Preference number: 5 (lower is better) Translates to: NVKMPIVLSNLQRTWNIAHHQNT*LPTIHI Trigger: GATGTGGATGGTTGGAAGCAATGTGTTTTGATGGTG...TGCTATATTCCAAGTTCTCTGAAGATTACTCAACACAATTGGCATCTTGACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164838.3 |
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CDS-3UTR CAA 90 bp | AATGTCAAGATGCCAATTGTGTTGAGTAATCTTCAGAGAACTTGGAATATAGCACACCTGAGCATACTCTaGCCCATATTCTTTAAACAC | + |
Preference number: 5 (lower is better) Translates to: NVKMPIVLSNLQRTWNIAHLSIL*PIFFKH Trigger: GTGTTTAAAGAATATGGGCAAGAGTATGCTCAGGTG...TGCTATATTCCAAGTTCTCTGAAGATTACTCAACACAATTGGCATCTTGACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164838.3 |
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CDS-3UTR CAA 90 bp | AATACTTCAAAACATAAAATACATCAGTTTGCATTAACAAGACACACGGAGGCCTCCATTTCATTGATTTaGGCATGTTCTGGAAGTTCT | + |
Preference number: 5 (lower is better) Translates to: NTSKHKIHQFALTRHTEASISLI*ACSGSS Trigger: AGAACTTCCAGAACATGCCAAAATCAATGAAATGGA...GGCCTCCGTGTGTCTTGTTAATGCAAACTGATGTATTTTATGTTTTGAAGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164838.3 |