Pregenerated sensors for EIF1AD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079031

Ensembl transcript IDs: ENSMUST00000110149.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 72 bp	TGTATACAACAAGGGCTAGAAATGAAAGGTCACAAATaGAAAGGCAGTCCCTTAACAGTGTACACTGCTGTG	+
Preference number: 3 (lower is better) Translates to: CIQQGLEMKGHK*KGSPLTVYTAV Trigger: CACAGCAGTGTACACTGTTAAGGGACTGCCTTTCCATTTGTGACCTTTCATTTCTAGCCCTTGTTGTATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110149.2
CDS-3UTR GCA 90 bp	CCAATTGTGTTGAGGAATCTTCAGAGAACTTGGAATATAGCATGCTTAGTTTATACCATCAAAACACATTaGTTCCAACCATCCACATCC	+
Preference number: 4 (lower is better) Translates to: PIVLRNLQRTWNIACLVYTIKTH*FQPSTS Trigger: GGATGTGGATGGTTGGAAGCAATGTGTTTTGATGGT...ATAAACTAAGCATGCTATATTCCAAGTTCTCTGAAGATTCCTCAACACAATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110149.2
CDS-3UTR GCA 90 bp	CCAATTGTGTTGAGGAATCTTCAGAGAACTTGGAATATAGCATGCTTAGTTTATTTTCATTTTTACCTCTaGGCCTGTTTTTGCCTCCTT	+
Preference number: 4 (lower is better) Translates to: PIVLRNLQRTWNIACLVYFHFYL*ACFCLL Trigger: AAGGAGGCAAAAACAGGCGCAGAGGTAAAAATGAAA...ATAAACTAAGCATGCTATATTCCAAGTTCTCTGAAGATTCCTCAACACAATTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110149.2
CDS TCA 72 bp	GCTTCCAACCATCCACATCCCAGCATTTTGGTCACCTaGGCATACTCTTGCCCATATTCTTTAAACACCAAC	+
Preference number: 6 (lower is better) Translates to: ASNHPHPSILVT*AYSCPYSLNTN Trigger: GTTGGTGTTTAAAGAATATGGGCAAGAGTATGCTCAGGTGACCAAAATGCTGGGATGTGGATGGTTGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110149.2
CDS TCA 72 bp	CTTCATCATCCCCAGCACCAAATGTGTCCATTTCATTaGTTTTGGCATGTTCTGGAAGTTCTCCATAGGCCT	+
Preference number: 6 (lower is better) Translates to: LHHPQHQMCPFH*FWHVLEVLHRP Trigger: AGGCCTATGGAGAACTTCCAGAACATGCCAAAATCAATGAAATGGACACATTTGGTGCTGGGGATGATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110149.2

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