Pregenerated sensors for EIF1AD19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095724Ensembl transcript IDs: ENSMUST00000164517.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGAGTGTGCCACCACTGCCTaGCTGGAATGGCAGTCTCTTAACAATGCACTGCTGTGCCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: SASQVLGLKECATTA*LEWQSLNNALLCPK Trigger: TTTAGGGCACAGCAGTGCATTGTTAAGAGACTGCCATTCCAGCCAGGCAGTGGTGGCACACTCCTTTAATCCCAGCACTTGGGAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR CCA 90 bp | CAAGTGCTGGGATTAAAGGAGTGTGCCACCACTGCCTGGCTGGAATaGCAGTCTCTTAACAATGCACTGCTGTGCCCTAAATTCAATTAT | + |
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Preference number: 1 (lower is better) Translates to: QVLGLKECATTAWLE*QSLNNALLCPKFNY Trigger: ATAATTGAATTTAGGGCACAGCAGTGCATTGTTAAGAGACTGCCATTCCAGCCAGGCAGTGGTGGCACACTCCTTTAATCCCAGCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGGACTTACTTCAGCCCAGGATGGCCACCTGGCAGAACTGCTGACACCACACGGGATTAAAGGAGTGTaGCACCACTGCCTGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LGLTSAQDGHLAELLTPHGIKGV*HHCLAG Trigger: TCCAGCCAGGCAGTGGTGGCACACTCCTTTAATCCC...GTGTGGTGTCAGCAGTTCTGCCAGGTGGCCATCCTGGGCTGAAGTAAGTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CCA 90 bp | CTTACTTCAGCCCAGGATGGCCACCTGGCAGAACTGCTGACACCACACACTCACTGTGCCACCACTGCCTaGCTGGAATGGCAGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LTSAQDGHLAELLTPHTHCATTA*LEWQSL Trigger: AAGAGACTGCCATTCCAGCCAGGCAGTGGTGGCACA...GTGAGTGTGTGGTGTCAGCAGTTCTGCCAGGTGGCCATCCTGGGCTGAAGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CCA 90 bp | CTTACTTCAGCCCAGGATGGCCACCTGGCAGAACTGCTGACACCACACACTCACCCACCACTGCCTGGCTaGAATGGCAGTCTCTTAACA | + |
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Preference number: 2 (lower is better) Translates to: LTSAQDGHLAELLTPHTHPPLPG*NGSLLT Trigger: TGTTAAGAGACTGCCATTCCAGCCAGGCAGTGGTGG...GTGAGTGTGTGGTGTCAGCAGTTCTGCCAGGTGGCCATCCTGGGCTGAAGTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGGACTTACTTCAGCCCAGGATGGCCACCTGGCAGAACTGCTGACACCACACTTCTCTGTGAAGCCCTaGCTGTCCTGGAACTCACTC | + |
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Preference number: 2 (lower is better) Translates to: LGLTSAQDGHLAELLTPHFSVKP*LSWNSL Trigger: GAGTGAGTTCCAGGACAGCCAGGGCTTCACAGAGAA...GTGTGGTGTCAGCAGTTCTGCCAGGTGGCCATCCTGGGCTGAAGTAAGTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR GCA 90 bp | AGAACTGCTGACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAAATATCCACCTGCCTCTaGCTCCCAAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: RTADTTHSHARNEGSQMEISTCL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATAT...TTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTCAGCAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CCA 90 bp | GAACTGCTGACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAATACTGCCTGGCTGGAATaGCAGTCTCTTAACAATGCA | + |
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Preference number: 2 (lower is better) Translates to: ELLTPHTHMPEMKGHKWNTAWLE*QSLNNA Trigger: TGCATTGTTAAGAGACTGCCATTCCAGCCAGGCAGT...ATTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTCAGCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR TCA 90 bp | GACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAATGGCAGGACGATTTACTTAACAGCTaGACATCAAGATGCCAATTG | + |
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Preference number: 2 (lower is better) Translates to: DTTHSHARNEGSQMEWQDDLLNS*TSRCQL Trigger: CAATTGGCATCTTGATGTTCAGCTGTTAAGTAAATC...GTCCTGCCATTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR GCA 90 bp | AGAACTGCTGACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAACTCTTAACAATGCACTaGTGTGCCCTAAATTCAATT | + |
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Preference number: 2 (lower is better) Translates to: RTADTTHSHARNEGSQMELLTMH*CALNSI Trigger: AATTGAATTTAGGGCACAGCAGTGCATTGTTAAGAG...TTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTCAGCAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR CCA 72 bp | CAGGTGTGCTGGACTAGGACTTACTTCAGCCCAGGATaGCCACCTGGCAGAACTGCTGACACCACACACTCA | + |
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Preference number: 3 (lower is better) Translates to: QVCWTRTYFSPG*PPGRTADTTHS Trigger: TGAGTGTGTGGTGTCAGCAGTTCTGCCAGGTGGCCATCCTGGGCTGAAGTAAGTCCTAGTCCAGCACACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR CCA 72 bp | CACTCACATGCCAGAAATGAAGGGTCACAAATGGAATaGCAGGACCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: HSHARNEGSQME*QDLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGGTCCTGCCATTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR GCA 72 bp | GCCAGATGCTTAAAATATAAAGTCCTGAAGCAGGTGTaGTGGACTAGGACTTACTTCAGCCCAGGATGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ARCLKYKVLKQV*WTRTYFSPGWP Trigger: TGGCCATCCTGGGCTGAAGTAAGTCCTAGTCCAGCACACCTGCTTCAGGACTTTATATTTTAAGCATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR CCA 72 bp | AGATGCTTAAAATATAAAGTCCTGAAGCAGGTGTGCTaGACTAGGACTTACTTCAGCCCAGGATGGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: RCLKYKVLKQVC*TRTYFSPGWPP Trigger: AGGTGGCCATCCTGGGCTGAAGTAAGTCCTAGTCCAGCACACCTGCTTCAGGACTTTATATTTTAAGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CAA 90 bp | CACACTCACATGCCAGAAATGAAGGGTCACAAATGGAATGGCAGGACCTCTCTCCAATCTTCTGAGAACTaGGAATATAGCATGCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: HTHMPEMKGHKWNGRTSLQSSEN*EYSMLR Trigger: TCTAAGCATGCTATATTCCAAGTTCTCAGAAGATTG...GAGAGAGGTCCTGCCATTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR GCA 72 bp | CTGCCTGGCTGGAATGGCAGTCTCTTAACAATGCACTaGTGTGCCCTAAATTCAATTATACCGATAAGTACA | + |
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Preference number: 3 (lower is better) Translates to: LPGWNGSLLTMH*CALNSIIPIST Trigger: TGTACTTATCGGTATAATTGAATTTAGGGCACAGCAGTGCATTGTTAAGAGACTGCCATTCCAGCCAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| 3UTR-3UTR CAA 90 bp | AGAACTGCTGACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAAAAGATGCCAATTGTGTaGAACAATCTTCTGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: RTADTTHSHARNEGSQMEKMPIV*NNLLRT Trigger: AGTTCTCAGAAGATTGTTCAACACAATTGGCATCTT...TTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTCAGCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| CDS-3UTR GCA 90 bp | TCACATGCCAGAAATGAAGGGTCACAAATGGAATGGCAGGACCTCTCTCTCTCTCTCTGCACCTGTTTTTaGCTCCTTTGCCTTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: SHARNEGSQMEWQDLSLSLCTCF*LLCLYS Trigger: AGAATAAAGGCAAAGGAGGCAAAAACAGGTGCAGAG...AGAGAGAGAGAGGTCCTGCCATTCCATTTGTGACCCTTCATTTCTGGCATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| CDS-3UTR TCA 90 bp | AGAACTGCTGACACCACACACTCACATGCCAGAAATGAAGGGTCACAAATGGAAATGTGTCCGTTTCATTaGTTTTGGCATGTTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RTADTTHSHARNEGSQMEMCPFH*FWHVLE Trigger: TTCAAGAACATGCCAAAATCAATGAAACGGACACAT...TTCCATTTGTGACCCTTCATTTCTGGCATGTGAGTGTGTGGTGTCAGCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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| CDS-3UTR CAA 90 bp | TCAAATGCAGCCAGATGCTTAAAATATAAAGTCCTGAAGCAGGTGTGCTGGACTCCTCTGCACCTGTTTTaGCCTCCTTTGCCTTTATTC | + |
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Preference number: 5 (lower is better) Translates to: SNAARCLKYKVLKQVCWTPLHLF*PPLPLF Trigger: GAATAAAGGCAAAGGAGGCAAAAACAGGTGCAGAGG...AGTCCAGCACACCTGCTTCAGGACTTTATATTTTAAGCATCTGGCTGCATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164517.3 |
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