Pregenerated sensors for EIF1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057561Ensembl transcript IDs: ENSMUST00000078079.11, ENSMUST00000168382.2, ENSMUST00000235455.2, ENSMUST00000235849.2, ENSMUST00000235973.2, ENSMUST00000236497.2, ENSMUST00000237478.2, ENSMUST00000238168.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGACACACTACTATAGCCTCCAGAGCATCTTTGTGCGAGTGCTaGTGTGTGTATGGGCACCTGTACATGTTGTGGACTGAGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: PRHTTIASRASLCEC*CVYGHLYMLWTERT Trigger: TGTCCTCTCAGTCCACAACATGTACAGGTGCCCATACACACATCAGCACTCGCACAAAGATGCTCTGGAGGCTATAGTAGTGTGTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR CCA 90 bp | ACAGTTTCTTGTTTGCTGCTGAAGGCCATCAAGCTAGCTGGTCCATaGTCAGGTTTTCTTTCTGTCATAAAAATTTACAGCAGCAATAGG | + |
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Preference number: 1 (lower is better) Translates to: TVSCLLLKAIKLAGP*SGFLSVIKIYSSNR Trigger: CCTATTGCTGCTGTAAATTTTTATGACAGAAAGAAAACCTGACCATGGACCAGCTAGCTTGATGGCCTTCAGCAGCAAACAAGAAACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR CCA 90 bp | AACTTGGACAGTTTCTTGTTTGCTGCTGAAGGCCATCAAGCTAGCTaGTCCATGGTCAGGTTTTCTTTCTGTCATAAAAATTTACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NLDSFLFAAEGHQAS*SMVRFSFCHKNLQQ Trigger: CTGCTGTAAATTTTTATGACAGAAAGAAAACCTGACCATGGACCAGCTAGCTTGATGGCCTTCAGCAGCAAACAAGAAACTGTCCAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR TCA 90 bp | TGCATTAACAAGTCATACACATGCCATGAAGTTTTACTTAACAGATaGAGGTCAAGATGCCACTGTGTGGAGCTATCTTCAGAGAACTTG | + |
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Preference number: 1 (lower is better) Translates to: CINKSYTCHEVLLNR*RSRCHCVELSSENL Trigger: CAAGTTCTCTGAAGATAGCTCCACACAGTGGCATCTTGACCTTCATCTGTTAAGTAAAACTTCATGGCATGTGTATGACTTGTTAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCAGATGTGCTGGACTAGGACTTACTTCAGCTCACGATGGCCACCTGGCCAAGATGCCACTGTGTaGAGCTATCTTCAGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: LKQMCWTRTYFSSRWPPGQDATV*SYLQRT Trigger: AGTTCTCTGAAGATAGCTCCACACAGTGGCATCTTG...GCCAGGTGGCCATCGTGAGCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GCGAGTGCTGATGTGTGTATGGGCACCTGTACATGTTGTGGACTGAGAGGACATCTGAAGCAGATGTGCTaGACTAGGACTTACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASADVCMGTCTCCGLRGHLKQMC*TRTYFS Trigger: GCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAG...ATGTCCTCTCAGTCCACAACATGTACAGGTGCCCATACACACATCAGCACTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR CAA 90 bp | TCTTCAGGCACTAGTCCTCACCTCCTAACTTGGACAGTTTCTTGTTaGCTGCTGAAGGCCATCAAGCTAGCTGGTCCATGGTCAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SSGTSPHLLTWTVSC*LLKAIKLAGPWSGF Trigger: AAAACCTGACCATGGACCAGCTAGCTTGATGGCCTTCAGCAGCAAACAAGAAACTGTCCAAGTTAGGAGGTGAGGACTAGTGCCTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTACCTGGCAGAACTGCTaGCACAAAACACTCCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: LLENFSMQCKHQNRLTALTWQNC*HKTLPC Trigger: GCACGGGAGTGTTTTGTGTCAGCAGTTCTGCCAGGT...AAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCACCTGGCAGAACTGCTaGCACAAAACACTCCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: WKTSLCNASIRTDSLLFFTWQNC*HKTLPC Trigger: GCACGGGAGTGTTTTGTGTCAGCAGTTCTGCCAGGT...GAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAAACAGGAAATGGGAATACCTCAGGGTTTGCCTCTGATGGTTTGCAATGTGCTGATGTGTGTATaGGCACCTGTACATGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SRKQEMGIPQGLPLMVCNVLMCV*APVHVV Trigger: CACAACATGTACAGGTGCCCATACACACATCAGCAC...ATTGCAAACCATCAGAGGCAAACCCTGAGGTATTCCCATTTCCTGTTTCCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR TCA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATCTCCCGTGCCAGAAATaGAGCTACAAATGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNLPCQK*SYKWKG Trigger: GCCTTTCCATTTGTAGCTTCATTTCTGGCACGGGAG...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTCTCCCGTGCCAGAAATaGAGCTACAAATGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HCKMPFYGWQQLKGSNECLPCQK*SYKWKG Trigger: GCCTTTCCATTTGTAGCTTCATTTCTGGCACGGGAG...ACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCCTCCCGTGCCAGAAATaGAGCTACAAATGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TSLCNASIRTDSLLFFIFLPCQK*SYKWKG Trigger: GCCTTTCCATTTGTAGCTTCATTTCTGGCACGGGAG...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGAAACAGGAAATGGGAATACCTCAGGGTTTGCCTCTGATGGTTTGCAATAACTTCTCTATGCAATaGAAGCATCAGAACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: SRKQEMGIPQGLPLMVCNNFSMQ*KHQNRL Trigger: GAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTT...ATTGCAAACCATCAGAGGCAAACCCTGAGGTATTCCCATTTCCTGTTTCCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCAAGATGCCACTGTGTaGAGCTATCTTCAGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: ALLENFSMQCKHQNRLTAQDATV*SYLQRT Trigger: AGTTCTCTGAAGATAGCTCCACACAGTGGCATCTTG...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATCTGAAGCAGATGTGCTaGACTAGGACTTACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNLKQMC*TRTYFS Trigger: GCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAG...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTCTGAAGCAGATGTGCTaGACTAGGACTTACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: HCKMPFYGWQQLKGSNECLKQMC*TRTYFS Trigger: GCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAG...ACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTTATCTTCAGAGAACTTaGAAGGTAGCATGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: ALLENFSMQCKHQNRLTAYLQRT*KVACLG Trigger: ACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATA...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTCAAGATGCCACTGTGTaGAGCTATCTTCAGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: HCKMPFYGWQQLKGSNECQDATV*SYLQRT Trigger: AGTTCTCTGAAGATAGCTCCACACAGTGGCATCTTG...ACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCGAATGTATACAACGTaGAAGTATAAAATGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: ALLENFSMQCKHQNRLTARMYTT*KYKMAW Trigger: CCATGCCATTTTATACTTTCACGTTGTATACATTCG...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCTATCTTCAGAGAACTTaGAAGGTAGCATGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: WKTSLCNASIRTDSLLFFYLQRT*KVACLG Trigger: ACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATA...GAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTATACCAAGATGCCACTGTGTaGAGCTATCTTCAGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: VRCLFMGGNNLKDQTNVYQDATV*SYLQRT Trigger: AGTTCTCTGAAGATAGCTCCACACAGTGGCATCTTG...GTATACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCGTGAAAGTATAAAATaGCATGGCTCCATAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: ALLENFSMQCKHQNRLTARESIK*HGSIST Trigger: TGTACTTATGGAGCCATGCCATTTTATACTTTCACG...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTATGCCTTTTTATGGGTaGCAACAACTTAAAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: ALLENFSMQCKHQNRLTAMPFYG*QQLKGS Trigger: TGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCAT...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGTATCTTCAGAGAACTTaGAAGGTAGCATGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: VLLTAALLENFSMQCKHQYLQRT*KVACLG Trigger: ACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATA...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCACTGCTGTGCGCTAGGTTCAATTATATTCAAAAGCACAAAGTGTTAACATATCTTCAGAGAACTTaGAAGGTAGCATGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: CSLLCARFNYIQKHKVLTYLQRT*KVACLG Trigger: ACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATA...TGTTAACACTTTGTGCTTTTGAATATAATTGAACCTAGCGCACAGCAGTGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078079.11 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCCGAATGTATACAACGTaGAAGTATAAAATGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: TSLCNASIRTDSLLFFIFRMYTT*KYKMAW Trigger: CCATGCCATTTTATACTTTCACGTTGTATACATTCG...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGCGAATGTATACAACGTaGAAGTATAAAATGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: VLLTAALLENFSMQCKHQRMYTT*KYKMAW Trigger: CCATGCCATTTTATACTTTCACGTTGTATACATTCG...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCTATATCTTCAGAGAACTTaGAAGGTAGCATGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: FSMQCKHQNRLTALFHFLYLQRT*KVACLG Trigger: ACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATA...TAGAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCCGTGAAAGTATAAAATaGCATGGCTCCATAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: TSLCNASIRTDSLLFFIFRESIK*HGSIST Trigger: TGTACTTATGGAGCCATGCCATTTTATACTTTCACG...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTACAAAGATCTACATATCTCCATCTAGAAGAGATCCACCAATCAATGATATGCCTTTTTATGGGTaGCAACAACTTAAAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: TFTKIYISPSRRDPPINDMPFYG*QQLKGS Trigger: TGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCAT...ATCATTGATTGGTGGATCTCTTCTAGATGGAGATATGTAGATCTTTGTAAAGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGCAGATGTGCTGGACTAGGACTTACTTCAGCTCACGATGGCCACCTGGCCTATCTTCAGAGAACTaGGAAGGTAGCATGCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: LKQMCWTRTYFSSRWPPGLSSEN*EGSMLR Trigger: CCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAG...GCCAGGTGGCCATCGTGAGCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR CCA 72 bp | AGGACATCTTCAGGCACTAGTCCTCACCTCCTAACTTaGACAGTTTCTTGTTTGCTGCTGAAGGCCATCAAG | + |
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Preference number: 3 (lower is better) Translates to: RTSSGTSPHLLT*TVSCLLLKAIK Trigger: CTTGATGGCCTTCAGCAGCAAACAAGAAACTGTCCAAGTTAGGAGGTGAGGACTAGTGCCTGAAGATGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR TCA 72 bp | GGAAACAGGAAATGGGAATACCTCAGGGTTTGCCTCTaGTGGTTTGCAATGACCAAGACACACTACTATAGC | + |
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Preference number: 3 (lower is better) Translates to: GNRKWEYLRVCL*WFAMTKTHYYS Trigger: GCTATAGTAGTGTGTCTTGGTCATTGCAAACCATCAGAGGCAAACCCTGAGGTATTCCCATTTCCTGTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR TCA 72 bp | CCTGAGAAAGAACTAGTCTTTAAAAAGGAAGGCATCTaGGGACTGACAGTCGCGGTTTATACTCACTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: PEKELVFKKEGI*GLTVAVYTHSL Trigger: TAGGGAGTGAGTATAAACCGCGACTGTCAGTCCTCAGATGCCTTCCTTTTTAAAGACTAGTTCTTTCTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTATCTTCAGAGAACTaGGAAGGTAGCATGCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: ALLENFSMQCKHQNRLTALSSEN*EGSMLR Trigger: CCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAG...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| 3UTR CCA 72 bp | TGTTTGCTGCTGAAGGCCATCAAGCTAGCTGGTCCATaGTCAGGTTTTCTTTCTGTCATAAAAATTTACAGC | + |
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Preference number: 3 (lower is better) Translates to: CLLLKAIKLAGP*SGFLSVIKIYS Trigger: GCTGTAAATTTTTATGACAGAAAGAAAACCTGACCATGGACCAGCTAGCTTGATGGCCTTCAGCAGCAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR CCA 72 bp | AGAAAATACAGAGTAAGAGCTGGGGAGATTGCTCAGTaGGTAAAGGTGATTACTGTGGAGAACGACAAGATA | + |
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Preference number: 3 (lower is better) Translates to: RKYRVRAGEIAQ*VKVITVENDKI Trigger: TATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTACTCTGTATTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGAAACAGGAAATGGGAATACCTCAGGGTTTGCCTCTGATGGTTTGCAATTTAACAGCTGCTTTGTaGGAAAACTTCTCTATGCAA | + |
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Preference number: 3 (lower is better) Translates to: SRKQEMGIPQGLPLMVCNLTAAL*ENFSMQ Trigger: TTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAA...ATTGCAAACCATCAGAGGCAAACCCTGAGGTATTCCCATTTCCTGTTTCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| 3UTR-3UTR CAA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCCTATCTTCAGAGAACTaGGAAGGTAGCATGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSLCNASIRTDSLLFFIFLSSEN*EGSMLR Trigger: CCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAG...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATCTATCTTCAGAGAACTaGGAAGGTAGCATGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNLSSEN*EGSMLR Trigger: CCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAG...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTCTATCTTCAGAGAACTaGGAAGGTAGCATGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCKMPFYGWQQLKGSNECLSSEN*EGSMLR Trigger: CCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAG...ACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAAAAGTAGCCATATCTaGTCTGACTCCAAGTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLLTAALLENFSMQCKHQKSSHI*SDSKCS Trigger: GCTGCACTTGGAGTCAGACAAGATATGGCTACTTTT...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATAAAAGTAGCCATATCTaGTCTGACTCCAAGTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNKSSHI*SDSKCS Trigger: GCTGCACTTGGAGTCAGACAAGATATGGCTACTTTT...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR TCA 72 bp | AAGTCATACACATGCCATGAAGTTTTACTTAACAGATaGAGGTCAAGATGCCACTGTGTGGAGCTATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KSYTCHEVLLNR*RSRCHCVELSS Trigger: TGAAGATAGCTCCACACAGTGGCATCTTGACCTTCATCTGTTAAGTAAAACTTCATGGCATGTGTATGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| 3UTR GCA 72 bp | TTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATaGAAGCATCAGAACAGACTCACTGCTCTTTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTAALLENFSMQ*KHQNRLTALFH Trigger: ATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGAGAACTGGCTCCTaGCACCGCTGTCCTCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGEIAQWVKVITVENDKRTGS*HRCPPI Trigger: GATCGGAGGACAGCGGTGTCAGGAGCCAGTTCTCTT...GTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACAAGAGAACTGGCTCCTaGCACCGCTGTCCTCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: RVRAGEIAQWVKVITVENKRTGS*HRCPPI Trigger: GATCGGAGGACAGCGGTGTCAGGAGCCAGTTCTCTT...GTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACATGAGGGACTCCTGCTaGCAGCAGCTGAGACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRAGEIAQWVKVITVENDMRDSC*QQLRLL Trigger: AAGGAGTCTCAGCTGCTGTCAGCAGGAGTCCCTCAT...GTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTGAAGCAGATGTGCTGGACTAGGACTTACTTCAGCTCACGATGGCCACCTACCGTCAAAGCACATTaGTTCCAACCGTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQMCWTRTYFSSRWPPTVKAH*FQPSIS Trigger: GGAAATGGACGGTTGGAAGCAATGTGCTTTGACGGT...AGGTGGCCATCGTGAGCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR CCA 90 bp | ACTTACTTCAGCTCACGATGGCCACCTGGCAGAACTGCTGACACAAAACACTCCAGCTTCCCTCTTATATaGCACAGCCTCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: TYFSSRWPPGRTADTKHSSFPLI*HSLLTP Trigger: CGGTGTGAGGAGGCTGTGCCATATAAGAGGGAAGCT...GGAGTGTTTTGTGTCAGCAGTTCTGCCAGGTGGCCATCGTGAGCTGAAGTAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGAAGCCACAGCCCACAGTaGCACCGAGATCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGDCSVGKGDYCGERQDRSHSPQ*HRDPSS Trigger: AGAGGAAGGATCTCGGTGTCACTGTGGGCTGTGGCT...TCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GCCACTGTGTGGAGCTATCTTCAGAGAACTTGGAAGGTAGCATGCTTAGGTCAGCCTGCTGACAGCAGCTaGGACTCCTTTCCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ATVWSYLQRTWKVACLGQPADSS*DSFPRT Trigger: TGTTCTTGGAAAGGAGTCTCAGCTGCTGTCAGCAGG...CTGACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAGCTCCACACAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237478.2 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTGTGGAGCTATCTTCAGAGAACTTGGAAGGTAGCATGCTTAGGTCAGAGCTTCCCTCTTATATaGCACAGCCTCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: ATVWSYLQRTWKVACLGQSFPLI*HSLLTP Trigger: CGGTGTGAGGAGGCTGTGCCATATAAGAGGGAAGCT...CTGACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAGCTCCACACAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR GCA 90 bp | ACTTACTTCAGCTCACGATGGCCACCTGGCAGAACTGCTGACACAAAACACTCCACCGTCAAAGCACATTaGTTCCAACCGTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TYFSSRWPPGRTADTKHSTVKAH*FQPSIS Trigger: GGAAATGGACGGTTGGAAGCAATGTGCTTTGACGGT...GGAGTGTTTTGTGTCAGCAGTTCTGCCAGGTGGCCATCGTGAGCTGAAGTAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACATGGAAGAAGAGAACTaGCTCCTGACACCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVRAGEIAQWVKVITVENMEEEN*LLTPLS Trigger: GGACAGCGGTGTCAGGAGCCAGTTCTCTTCTTCCAT...GTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACTCAATGGAACCCACTTaGTGGAAGAAGAGAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGEIAQWVKVITVENDSMEPT*WKKRTG Trigger: GCCAGTTCTCTTCTTCCATCAAGTGGGTTCCATTGA...GTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGAGTGCCTGCTGACAGCAGCTaGGACTCCTTTCCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GDCSVGKGDYCGERQDRVPADSS*DSFPRT Trigger: TGTTCTTGGAAAGGAGTCTCAGCTGCTGTCAGCAGG...CACTCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTGTGGAGCTATCTTCAGAGAACTTGGAAGGTAGCATGCTTAGGTCAGACCGTCAAAGCACATTaGTTCCAACCGTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATVWSYLQRTWKVACLGQTVKAH*FQPSIS Trigger: GGAAATGGACGGTTGGAAGCAATGTGCTTTGACGGT...CTGACCTAAGCATGCTACCTTCCAAGTTCTCTGAAGATAGCTCCACACAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGAATGGAAGAAGAGAACTaGCTCCTGACACCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGDCSVGKGDYCGERQDRMEEEN*LLTPLS Trigger: GGACAGCGGTGTCAGGAGCCAGTTCTCTTCTTCCAT...TCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACATAACTGGGAACAGGTaGCTCACAGAGGAGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VRAGEIAQWVKVITVENDITGNR*LTEEKT Trigger: TGTTTTCTCCTCTGTGAGTCACCTGTTCCCAGTTAT...GTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGAGATGGGAATCCTGTaGTCAGGCAAAATAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEIAQWVKVITVENDKIEMGIL*SGKITG Trigger: CCCAGTTATTTTGCCTGAGCACAGGATTCCCATCTC...TATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGATCAATGGAACCCACTTaGTGGAAGAAGAGAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WGDCSVGKGDYCGERQDRSMEPT*WKKRTG Trigger: GCCAGTTCTCTTCTTCCATCAAGTGGGTTCCATTGA...TCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGAGCAGAGTCCTGGCTTCTaGGAGCTACAAAATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GEIAQWVKVITVENDKIEQSPGF*ELQNST Trigger: AGTACTATTTTGTAGCTCTCAGAAGCCAGGACTCTG...CTCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACCTTTATTCTTTGGCATaGTGGAAAGGGCAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVRAGEIAQWVKVITVENLYSLA*WKGQPQ Trigger: CTGTGGTTGCCCTTTCCATCATGCCAAAGAATAAAG...GTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
||
| 3UTR CAA 72 bp | GCAAGCAGGAAACAGGAAATGGGAATACCTCAGGGTTaGCCTCTGATGGTTTGCAATGACCAAGACACACTA | + |
|
Preference number: 4 (lower is better) Translates to: ASRKQEMGIPQG*PLMVCNDQDTL Trigger: TAGTGTGTCTTGGTCATTGCAAACCATCAGAGGCAAACCCTGAGGTATTCCCATTTCCTGTTTCCTGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTAGCTTCCCTCTTATATaGCACAGCCTCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: LLENFSMQCKHQNRLTALSFPLI*HSLLTP Trigger: CGGTGTGAGGAGGCTGTGCCATATAAGAGGGAAGCT...AAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACAAGATAGACTCAGGCAAAATAACTaGGAACAGGTGACTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGDCSVGKGDYCGERQDRLRQNN*EQVTHR Trigger: TCTGTGAGTCACCTGTTCCCAGTTATTTTGCCTGAG...TCTATCTTGTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTACTGTGGAGAACGACTTTGCCTTTATTCTTTaGCATGATGGAAAGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGEIAQWVKVITVENDFAFIL*HDGKGN Trigger: GTTGCCCTTTCCATCATGCCAAAGAATAAAGGCAAA...GTCGTTCTCCACAGTAATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCAGCATTTTGATCACCTaGGCATACTCCTGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKTSLCNASIRTDSLLFFSILIT*AYSCPS Trigger: GGATGGGCAGGAGTATGCTCAGGTGATCAAAATGCT...GAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTATACATGAGGGACTCCTGCTaGCAGCAGCTGAGACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRCLFMGGNNLKDQTNVYMRDSC*QQLRLL Trigger: AAGGAGTCTCAGCTGCTGTCAGCAGGAGTCCCTCAT...GTATACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237478.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAGCTTCCCTCTTATATaGCACAGCCTCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: VLLTAALLENFSMQCKHQSFPLI*HSLLTP Trigger: CGGTGTGAGGAGGCTGTGCCATATAAGAGGGAAGCT...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTAGCATTTTGATCACCTaGGCATACTCCTGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HCKMPFYGWQQLKGSNECSILIT*AYSCPS Trigger: GGATGGGCAGGAGTATGCTCAGGTGATCAAAATGCT...ACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATAGCATTTTGATCACCTaGGCATACTCCTGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNSILIT*AYSCPS Trigger: GGATGGGCAGGAGTATGCTCAGGTGATCAAAATGCT...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAATACAGAGTAAGAGCTGGGGAGATTGCTCAGTGGGTAAAGGTGATTGAGATGGGAATCCTGTaGTCAGGCAAAATAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRKYRVRAGEIAQWVKVIEMGIL*SGKITG Trigger: CCCAGTTATTTTGCCTGAGCACAGGATTCCCATCTC...AATCACCTTTACCCACTGAGCAATCTCCCCAGCTCTTACTCTGTATTTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGACCGTCAAAGCACATTaGTTCCAACCGTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLTAALLENFSMQCKHQTVKAH*FQPSIS Trigger: GGAAATGGACGGTTGGAAGCAATGTGCTTTGACGGT...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR CCA 90 bp | GCATTAACAAGTCATACACATGCCATGAAGTTTTACTTAACAGATGAAGGTCAAAGCTTCCCTCTTATATaGCACAGCCTCCTCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: ALTSHTHAMKFYLTDEGQSFPLI*HSLLTP Trigger: CGGTGTGAGGAGGCTGTGCCATATAAGAGGGAAGCT...TTGACCTTCATCTGTTAAGTAAAACTTCATGGCATGTGTATGACTTGTTAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTACAAAGATCTACATATCTCCATCTAGAAGAGATCCACCAATCAATGATAGCATTTTGATCACCTaGGCATACTCCTGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TFTKIYISPSRRDPPINDSILIT*AYSCPS Trigger: GGATGGGCAGGAGTATGCTCAGGTGATCAAAATGCT...ATCATTGATTGGTGGATCTCTTCTAGATGGAGATATGTAGATCTTTGTAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
||
| CDS-3UTR TCA 90 bp | GCATTAACAAGTCATACACATGCCATGAAGTTTTACTTAACAGATGAAGGTCAAAGCATTTTGATCACCTaGGCATACTCCTGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTSHTHAMKFYLTDEGQSILIT*AYSCPS Trigger: GGATGGGCAGGAGTATGCTCAGGTGATCAAAATGCT...TTGACCTTCATCTGTTAAGTAAAACTTCATGGCATGTGTATGACTTGTTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR TCA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCCAGAGTCCTGGCTTCTaGGAGCTACAAAATAGTACT | + |
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Preference number: 4 (lower is better) Translates to: TSLCNASIRTDSLLFFIFQSPGF*ELQNST Trigger: AGTACTATTTTGTAGCTCTCAGAAGCCAGGACTCTG...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237478.2 |
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| CDS-3UTR TCA 90 bp | TGCTCACTGCTGTGCGCTAGGTTCAATTATATTCAAAAGCACAAAGTGTTAACACTTTATTCTTTGGCATaGTGGAAAGGGCAACCACAG | + |
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Preference number: 4 (lower is better) Translates to: CSLLCARFNYIQKHKVLTLYSLA*WKGQPQ Trigger: CTGTGGTTGCCCTTTCCATCATGCCAAAGAATAAAG...TGTTAACACTTTGTGCTTTTGAATATAATTGAACCTAGCGCACAGCAGTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237478.2 |
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| CDS-3UTR TCA 90 bp | TGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: WKTSLCNASIRTDSLLFFMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...GAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTAACAGTGCTCACTGCTGTGCGCTAGGTTCAATTATATTCAAAAGCACAATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLNSAHCCALGSIIFKSTMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...TGTGCTTTTGAATATAATTGAACCTAGCGCACAGCAGTGAGCACTGTTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078079.11 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR GCA 90 bp | GCATTAACAAGTCATACACATGCCATGAAGTTTTACTTAACAGATGAAGGTCAAACCGTCAAAGCACATTaGTTCCAACCGTCCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALTSHTHAMKFYLTDEGQTVKAH*FQPSIS Trigger: GGAAATGGACGGTTGGAAGCAATGTGCTTTGACGGT...TTGACCTTCATCTGTTAAGTAAAACTTCATGGCATGTGTATGACTTGTTAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CCA 90 bp | TGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCTTTGCCTTTATTCTTTaGCATGATGGAAAGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: WKTSLCNASIRTDSLLFFFAFIL*HDGKGN Trigger: GTTGCCCTTTCCATCATGCCAAAGAATAAAGGCAAA...GAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237478.2 |
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| CDS-3UTR TCA 90 bp | GTGTTATTAACAGCTGCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VLLTAALLENFSMQCKHQMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...CTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGCAGCTGTTAATAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR TCA 90 bp | GTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTATACATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRCLFMGGNNLKDQTNVYMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...GTATACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCTAATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FSMQCKHQNRLTALFHFLMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...TAGAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTACAAAGATCTACATATCTCCATCTAGAAGAGATCCACCAATCAATGATATGTGTCCGTTTCATTaGTTTTGGCATGTTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TFTKIYISPSRRDPPINDMCPFH*FWHVLE Trigger: TTCCAGAACATGCCAAAATCAATGAAACGGACACAT...ATCATTGATTGGTGGATCTCTTCTAGATGGAGATATGTAGATCTTTGTAAAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078079.11 |
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| CDS-3UTR CAA 90 bp | GGCCTGAAGCAGATGTGCTGGACTAGGACTTACTTCAGCTCACGATGGCCACCTTCCGTTTCATTGATTTaGGCATGTTCTGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GLKQMCWTRTYFSSRWPPSVSLI*ACSGSS Trigger: AGAACTTCCAGAACATGCCAAAATCAATGAAACGGA...AGGTGGCCATCGTGAGCTGAAGTAAGTCCTAGTCCAGCACATCTGCTTCAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTTCCGTTTCATTGATTTaGGCATGTTCTGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ALLENFSMQCKHQNRLTASVSLI*ACSGSS Trigger: AGAACTTCCAGAACATGCCAAAATCAATGAAACGGA...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTAATGTGTCCGTTTCATaGATTTTGGCATGTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ALLENFSMQCKHQNRLTANVSVS*ILACSG Trigger: TCCAGAACATGCCAAAATCAATGAAACGGACACATT...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGTTGGAAAACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTTCCAATATCATCAAATaGGATTTCATCATCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: ALLENFSMQCKHQNRLTASNIIK*DFIIIP Trigger: GGGGATGATGATGAAATCCAATTTGATGATATTGGA...AGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGTTTTCCAACAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCTCCGTTTCATTGATTTaGGCATGTTCTGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSLCNASIRTDSLLFFIFSVSLI*ACSGSS Trigger: AGAACTTCCAGAACATGCCAAAATCAATGAAACGGA...GAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTATGCAATGCAAGCATCAGAACAGACTCACTGCTCTTTTTCATTTTCTATCCGTTTCATTGATTTaGGCATGTTCTGGAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FSMQCKHQNRLTALFHFLSVSLI*ACSGSS Trigger: AGAACTTCCAGAACATGCCAAAATCAATGAAACGGA...TAGAAAATGAAAAAGAGCAGTGAGTCTGTTCTGATGCTTGCATTGCATAGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGCTGTGCGCTAGGTTCAATTATATTCAAAAGCACAAAGTGTTAACATCCAATATCATCAAATaGGATTTCATCATCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: CSLLCARFNYIQKHKVLTSNIIK*DFIIIP Trigger: GGGGATGATGATGAAATCCAATTTGATGATATTGGA...TGTTAACACTTTGTGCTTTTGAATATAATTGAACCTAGCGCACAGCAGTGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078079.11 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | TGCACTGTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATTCCAATATCATCAAATaGGATTTCATCATCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: CTVRCLFMGGNNLKDQTNSNIIK*DFIIIP Trigger: GGGGATGATGATGAAATCCAATTTGATGATATTGGA...ATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTACAGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS-3UTR CAA 90 bp | GTAAGATGCCTTTTTATGGGTGGCAACAACTTAAAGGATCAAACGAATGTATACTCCAATATCATCAAATaGGATTTCATCATCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: VRCLFMGGNNLKDQTNVYSNIIK*DFIIIP Trigger: GGGGATGATGATGAAATCCAATTTGATGATATTGGA...GTATACATTCGTTTGATCCTTTAAGTTGTTGCCACCCATAAAAAGGCATCTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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| CDS GCA 72 bp | AGGTGTGGTCTCCTCCTGAGTCGTGTGCTTACCACGTaGCAGCCGCTCTCTCCTAGCTGCCTTTTCCCGACA | + |
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Preference number: 6 (lower is better) Translates to: RCGLLLSRVLTT*QPLSPSCLFPT Trigger: TGTCGGGAAAAGGCAGCTAGGAGAGAGCGGCTGGCACGTGGTAAGCACACGACTCAGGAGGAGACCACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236497.2 ENSMUST00000237478.2 |
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| CDS TCA 72 bp | GTGACTCACAGAGGAGAAAACAGCCACAGCCCACAGTaGCACCGAGATCCTTCCTCTGCGCCTGTTTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VTHRGENSHSPQ*HRDPSSAPVFA Trigger: GGCAAAAACAGGCGCAGAGGAAGGATCTCGGTGTCACTGTGGGCTGTGGCTGTTTTCTCCTCTGTGAGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
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| CDS GCA 72 bp | CAGCCACAGCCCACAGTGACACCGAGATCCTTCCTCTaGGCCTGTTTTTGCCTCCTTTGCCTTTATTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: QPQPTVTPRSFL*ACFCLLCLYSL Trigger: CAAAGAATAAAGGCAAAGGAGGCAAAAACAGGCGCAGAGGAAGGATCTCGGTGTCACTGTGGGCTGTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
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| CDS CAA 90 bp | CACAGTGACACCGAGATCCTTCCTCTGCGCCTGTTTTTGCCTCCTTaGCCTTTATTCTTTGGCATGATGGAAAGGGCAACCACAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: HSDTEILPLRLFLPP*PLFFGMMERATTGV Trigger: GACTCCTGTGGTTGCCCTTTCCATCATGCCAAAGAATAAAGGCAAAGGAGGCAAAAACAGGCGCAGAGGAAGGATCTCGGTGTCACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236497.2 |
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| CDS TCA 72 bp | GGAATCCTGTGCTCAGGCAAAATAACTGGGAACAGGTaGCTCACAGAGGAGAAAACAGCCACAGCCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: GILCSGKITGNR*LTEEKTATAHS Trigger: ACTGTGGGCTGTGGCTGTTTTCTCCTCTGTGAGTCACCTGTTCCCAGTTATTTTGCCTGAGCACAGGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235849.2 ENSMUST00000236497.2 |
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| CDS TCA 72 bp | CACAGGCAGCAAACAGTGTTGCAGAGTCCTGGCTTCTaGGAGCTACAAAATAGTACTTCGGTTCTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HRQQTVLQSPGF*ELQNSTSVLAW Trigger: CCAGGCCAGAACCGAAGTACTATTTTGTAGCTCTCAGAAGCCAGGACTCTGCAACACTGTTTGCTGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236497.2 ENSMUST00000237478.2 |
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| CDS TCA 72 bp | GCCTGTTTTTGCCTCCTTTGCCTTTATTCTTTGGCATaGTGGAAAGGGCAACCACAGGAGTCGAATGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ACFCLLCLYSLA*WKGQPQESNEG Trigger: TCCCTCATTCGACTCCTGTGGTTGCCCTTTCCATCATGCCAAAGAATAAAGGCAAAGGAGGCAAAAACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236497.2 ENSMUST00000237478.2 |
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| CDS CAA 90 bp | CTAGATGTCATCAATGTCTTCATCATCATCTCCAATATCATCAAATaGGATTTCATCATCATCCCCAGGACCAAATGTGTCCGTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LDVINVFIIISNIIK*DFIIIPRTKCVRFI Trigger: AATGAAACGGACACATTTGGTCCTGGGGATGATGATGAAATCCAATTTGATGATATTGGAGATGATGATGAAGACATTGATGACATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078079.11 ENSMUST00000168382.2 ENSMUST00000235455.2 ENSMUST00000235973.2 ENSMUST00000237478.2 ENSMUST00000238168.2 |
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