RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EID3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000109864

Ensembl transcript IDs: ENSMUST00000211623.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CAAACAGCACGTTGGCTTCCTCCAGGGCCTCACTCAGCGTGTCGCTaGCCGTGTTCACAATGTCCTCGCGGTTCTGCTGCACGGTGTAGA +
Preference number: 5 (lower is better)
Translates to: QTARWLPPGPHSACR*PCSQCPRGSAARCR
Trigger: TCTACACCGTGCAGCAGAACCGCGAGGACATTGTGAACACGGCCAGCGACACGCTGAGTGAGGCCCTGGAGGAAGCCAACGTGCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 90 bp AGGCCAAAACCAGGAACTGGGCATCAAGGGCTGCCTCTCTGGTTCTaGTCACTCCGTCAAACAGCACGTTGGCTTCCTCCAGGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: RPKPGTGHQGLPLWF*SLRQTARWLPPGPH
Trigger: GTGAGGCCCTGGAGGAAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGGTTTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS TCA 90 bp TGGCCGTGTTCACAATGTCCTCGCGGTTCTGCTGCACGGTGTAGATaGGCTGCCGGTACTGCCTGCGGATTTTGCGGCACTTCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: WPCSQCPRGSAARCR*AAGTACGFCGTSLD
Trigger: ATCGAGAGAAGTGCCGCAAAATCCGCAGGCAGTACCGGCAGCTCATCTACACCGTGCAGCAGAACCGCGAGGACATTGTGAACACGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 90 bp GATCAGAGGCCAAAACCAGGAACTGGGCATCAAGGGCTGCCTCTCTaGTTCTGCTCACTCCGTCAAACAGCACGTTGGCTTCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: DQRPKPGTGHQGLPL*FCSLRQTARWLPPG
Trigger: CCCTGGAGGAAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGGTTTTGGCCTCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 90 bp CTTCTTCACTGCCTCTTCCTCCTCCTGTTTCACCAGGTGCTGCCATaGCAGACTCCGGACCAGCTCCCCTCTTTTCTCTTTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LLHCLFLLLFHQVLP*QTPDQLPSFLFASS
Trigger: ACTGGAGGCAAAGAGAAAAGAGGGGAGCTGGTCCGGAGTCTGGCATGGCAGCACCTGGTGAAACAGGAGGAGGAAGAGGCAGTGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 90 bp TGCTTCGCCTTCTCTTTACCCAGATCAGAGGCCAAAACCAGGAACTaGGCATCAAGGGCTGCCTCTCTGGTTCTGCTCACTCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: CFAFSLPRSEAKTRN*ASRAASLVLLTPSN
Trigger: GTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGGTTTTGGCCTCTGATCTGGGTAAAGAGAAGGCGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS TCA 90 bp GTGACATCCAAGCCGGGGCTTTCGTGCAGAACGTTCTGCCTTAAATaGCCCAAAAATGAAGTGGAACGTTTCGGCTTGCAGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: VTSKPGLSCRTFCLK*PKNEVERFGLQHPG
Trigger: TCCTGGATGCTGCAAGCCGAAACGTTCCACTTCATTTTTGGGTCATTTAAGGCAGAACGTTCTGCACGAAAGCCCCGGCTTGGATGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 90 bp GGCTTTCGTGCAGAACGTTCTGCCTTAAATGACCCAAAAATGAAGTaGAACGTTTCGGCTTGCAGCATCCAGGAGGTTGCTTCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: GFRAERSALNDPKMK*NVSACSIQEVASSC
Trigger: GCACGAGGAAGCAACCTCCTGGATGCTGCAAGCCGAAACGTTCCACTTCATTTTTGGGTCATTTAAGGCAGAACGTTCTGCACGAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 72 bp CGTTGGCTTCCTCCAGGGCCTCACTCAGCGTGTCGCTaGCCGTGTTCACAATGTCCTCGCGGTTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RWLPPGPHSACR*PCSQCPRGSAA
Trigger: TGCAGCAGAACCGCGAGGACATTGTGAACACGGCCAGCGACACGCTGAGTGAGGCCCTGGAGGAAGCCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 72 bp CCTCTCTGGTTCTGCTCACTCCGTCAAACAGCACGTTaGCTTCCTCCAGGGCCTCACTCAGCGTGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: PLWFCSLRQTAR*LPPGPHSACRW
Trigger: CCAGCGACACGCTGAGTGAGGCCCTGGAGGAAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CAA 72 bp GCCTCTCTGGTTCTGCTCACTCCGTCAAACAGCACGTaGGCTTCCTCCAGGGCCTCACTCAGCGTGTCGCTG +
Preference number: 6 (lower is better)
Translates to: ASLVLLTPSNST*ASSRASLSVSL
Trigger: CAGCGACACGCTGAGTGAGGCCCTGGAGGAAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS TCA 72 bp TCACAATGTCCTCGCGGTTCTGCTGCACGGTGTAGATaGGCTGCCGGTACTGCCTGCGGATTTTGCGGCACT +
Preference number: 6 (lower is better)
Translates to: SQCPRGSAARCR*AAGTACGFCGT
Trigger: AGTGCCGCAAAATCCGCAGGCAGTACCGGCAGCTCATCTACACCGTGCAGCAGAACCGCGAGGACATTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp TTCACTGCCTCTTCCTCCTCCTGTTTCACCAGGTGCTaGCATGCCAGACTCCGGACCAGCTCCCCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: FTASSSSCFTRC*HARLRTSSPLF
Trigger: GAAAAGAGGGGAGCTGGTCCGGAGTCTGGCATGGCAGCACCTGGTGAAACAGGAGGAGGAAGAGGCAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp TTCTTCACTGCCTCTTCCTCCTCCTGTTTCACCAGGTaGTGCCATGCCAGACTCCGGACCAGCTCCCCTCTT +
Preference number: 6 (lower is better)
Translates to: FFTASSSSCFTR*CHARLRTSSPL
Trigger: AAGAGGGGAGCTGGTCCGGAGTCTGGCATGGCAGCACCTGGTGAAACAGGAGGAGGAAGAGGCAGTGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp CCAGGAACTGGGCATCAAGGGCTGCCTCTCTGGTTCTaGTCACTCCGTCAAACAGCACGTTGGCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PGTGHQGLPLWF*SLRQTARWLPP
Trigger: TGGAGGAAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp TGCCTCTTCCTCCTCCTGTTTCACCAGGTGCTGCCATaGCAGACTCCGGACCAGCTCCCCTCTTTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: CLFLLLFHQVLP*QTPDQLPSFLF
Trigger: AAAGAGAAAAGAGGGGAGCTGGTCCGGAGTCTGGCATGGCAGCACCTGGTGAAACAGGAGGAGGAAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp ATCAGAGGCCAAAACCAGGAACTGGGCATCAAGGGCTaGCTCTCTGGTTCTGCTCACTCCGTCAAACAGCAC +
Preference number: 6 (lower is better)
Translates to: IRGQNQELGIKG*LSGSAHSVKQH
Trigger: GTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGGTTTTGGCCTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 72 bp CCAAAACCAGGAACTGGGCATCAAGGGCTGCCTCTCTaGTTCTGCTCACTCCGTCAAACAGCACGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: PKPGTGHQGLPL*FCSLRQTARWL
Trigger: AAGCCAACGTGCTGTTTGACGGAGTGAGCAGAACCAGAGAGGCAGCCCTTGATGCCCAGTTCCTGGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp CTCATCTTCCCCTTCCTCCTTTTCTTCCTTCTTCACTaGCTCTTCCTCCTCCTGTTTCACCAGGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LIFPFLLFFLLH*LFLLLFHQVLP
Trigger: TGGCAGCACCTGGTGAAACAGGAGGAGGAAGAGGCAGTGAAGAAGGAAGAAAAGGAGGAAGGGGAAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS TCA 72 bp AAGCCGGGGCTTTCGTGCAGAACGTTCTGCCTTAAATaGCCCAAAAATGAAGTGGAACGTTTCGGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: KPGLSCRTFCLK*PKNEVERFGLQ
Trigger: CTGCAAGCCGAAACGTTCCACTTCATTTTTGGGTCATTTAAGGCAGAACGTTCTGCACGAAAGCCCCGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS GCA 72 bp CTTGCAGCATCCAGGAGGTTGCTTCCTCGTGCAACATaGCCCAAAAGGAAAGAACTATGCTATCATCGCAGT +
Preference number: 6 (lower is better)
Translates to: LAASRRLLPRAT*PKRKELCYHRS
Trigger: ACTGCGATGATAGCATAGTTCTTTCCTTTTGGGGCATGTTGCACGAGGAAGCAACCTCCTGGATGCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CCA 72 bp GCAGAACGTTCTGCCTTAAATGACCCAAAAATGAAGTaGAACGTTTCGGCTTGCAGCATCCAGGAGGTTGCT +
Preference number: 6 (lower is better)
Translates to: AERSALNDPKMK*NVSACSIQEVA
Trigger: AGCAACCTCCTGGATGCTGCAAGCCGAAACGTTCCACTTCATTTTTGGGTCATTTAAGGCAGAACGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CAA 90 bp CTATCATCGCAGTCGCTAAATTCCTTACACTCCTCTTCTACCCAATaGAAGCCCACAAACAACAGCAGCAAATCGCAGAAGGCAATGGGA +
Preference number: 6 (lower is better)
Translates to: LSSQSLNSLHSSSTQ*KPTNNSSKSQKAMG
Trigger: TCCCATTGCCTTCTGCGATTTGCTGCTGTTGTTTGTGGGCTTCAATTGGGTAGAAGAGGAGTGTAAGGAATTTAGCGACTGCGATGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2
CDS CAA 72 bp CAGTCGCTAAATTCCTTACACTCCTCTTCTACCCAATaGAAGCCCACAAACAACAGCAGCAAATCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: QSLNSLHSSSTQ*KPTNNSSKSQK
Trigger: CTTCTGCGATTTGCTGCTGTTGTTTGTGGGCTTCAATTGGGTAGAAGAGGAGTGTAAGGAATTTAGCGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211623.2