RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EID2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070705

Ensembl transcript IDs: ENSMUST00000094651.4

Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAAGACAGTCTCCTGTAGCCCAGGCTGGCCTCCAACTCGCTACATaGCGGAGGATGACCTTGAAGTCCGGTCCTCCGGCCTCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: KRQSPVAQAGLQLAT*RRMTLKSGPPASFL
Trigger: GAGGAAGGAGGCCGGAGGACCGGACTTCAAGGTCATCCTCCGCCATGTAGCGAGTTGGAGGCCAGCCTGGGCTACAGGAGACTGTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR GCA 90 bp GGAAGTCAGAAGAGTCCTCTTTGCTTGTCAGCCTCAAGCCTCAAGTaGCCTTCTCTCTCCCGGCCTGCTTCATTCCACCCTGCCCACGGC +
Preference number: 1 (lower is better)
Translates to: GSQKSPLCLSASSLK*PSLSRPASFHPAHG
Trigger: GCCGTGGGCAGGGTGGAATGAAGCAGGCCGGGAGAGAGAAGGGCACTTGAGGCTTGAGGCTGACAAGCAAAGAGGACTCTTCTGACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 90 bp TCCCGGCCTGCTTCATTCCACCCTGCCCACGGCTGGATTCTGGCATaGATTCCCCACCTCATGACATTTGCCCAGACATCTGCCTTTGCC +
Preference number: 1 (lower is better)
Translates to: SRPASFHPAHGWILA*IPHLMTFAQTSAFA
Trigger: GGCAAAGGCAGATGTCTGGGCAAATGTCATGAGGTGGGGAATCCATGCCAGAATCCAGCCGTGGGCAGGGTGGAATGAAGCAGGCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 90 bp TTAACCACTGAGCCAAAACCCTACCCTACCTTGATTCAGAAGGAATaGGAGCAGGGCAAGAAGGCTTGGGGTCCATCCTCAGCACCCAAG +
Preference number: 1 (lower is better)
Translates to: LTTEPKPYPTLIQKE*EQGKKAWGPSSAPK
Trigger: CTTGGGTGCTGAGGATGGACCCCAAGCCTTCTTGCCCTGCTCCCATTCCTTCTGAATCAAGGTAGGGTAGGGTTTTGGCTCAGTGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 90 bp TGTTTACATTGCACGTGGATGTGCACCAGTGGTGCTTGGAGGAAATaGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCAA +
Preference number: 1 (lower is better)
Translates to: CLHCTWMCTSGAWRK*VWILPPSPLGSRDQ
Trigger: TTGATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 90 bp GGAGCAGGGCAAGAAGGCTTGGGGTCCATCCTCAGCACCCAAGATTaGGGGATAACTAGACTGGTACCAGTTCATATATGCCTTATAAAA +
Preference number: 1 (lower is better)
Translates to: GAGQEGLGSILSTQD*GITRLVPVHICLIK
Trigger: TTTTATAAGGCATATATGAACTGGTACCAGTCTAGTTATCCCCCAATCTTGGGTGCTGAGGATGGACCCCAAGCCTTCTTGCCCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR TCA 90 bp GAAGCAACCATGATTTTCAACAAATGCAGGGGAGGGAAAGATTGCTaGCAGTCACAAGGTGGAAGTCAGAAGAGTCCTCTTTGCTTGTCA +
Preference number: 1 (lower is better)
Translates to: EATMIFNKCRGGKDC*QSQGGSQKSPLCLS
Trigger: TGACAAGCAAAGAGGACTCTTCTGACTTCCACCTTGTGACTGTCAGCAATCTTTCCCTCCCCTGCATTTGTTGAAAATCATGGTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 90 bp CAACTACACAAGGTCTGGAAAAATATTCATCTCACAACACATACATaGTTTTCCCTATCTGAATATTTACAACTCGTCTACAGAACATCA +
Preference number: 1 (lower is better)
Translates to: QLHKVWKNIHLTTHT*FSLSEYLQLVYRTS
Trigger: TGATGTTCTGTAGACGAGTTGTAAATATTCAGATAGGGAAAACCATGTATGTGTTGTGAGATGAATATTTTTCCAGACCTTGTGTAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp GTGGATGTGCACCAGTGGTGCTTGGAGGAAATGGGTGTGGATTCTTCCACCTTCGGCTGGATTCTGGCATaGATTCCCCACCTCATGACA +
Preference number: 2 (lower is better)
Translates to: VDVHQWCLEEMGVDSSTFGWILA*IPHLMT
Trigger: TGTCATGAGGTGGGGAATCCATGCCAGAATCCAGCC...GAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR GCA 90 bp GAAGTCAGAAGAGTCCTCTTTGCTTGTCAGCCTCAAGCCTCAAGTGCCCTTCTCCCACCTCATGACATTTaGCCAGACATCTGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: EVRRVLFACQPQASSALLPPHDI*PDICLC
Trigger: GCAAAGGCAGATGTCTGGGCAAATGTCATGAGGTGG...GAGAAGGGCACTTGAGGCTTGAGGCTGACAAGCAAAGAGGACTCTTCTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp GCTTGGAGGAAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATTTGATTCAGAAGGAATaGGAGCAGGGCAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: AWRKWVWILPPSPLGSRDLIQKE*EQGKKA
Trigger: AGCCTTCTTGCCCTGCTCCCATTCCTTCTGAATCAA...ATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR TCA 90 bp GAAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCAAATTCAGGATTCCCCACCTCATaGCATTTGCCCAGACATCTG +
Preference number: 2 (lower is better)
Translates to: EMGVDSSTFTSWVQGSNSGFPTS*HLPRHL
Trigger: CAGATGTCTGGGCAAATGTCATGAGGTGGGGAATCC...TGAATTTGATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR GCA 90 bp GCTTGGAGGAAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCTTAGACTTCATCTTTaGAAAACCATCGTCCTTCGC +
Preference number: 2 (lower is better)
Translates to: AWRKWVWILPPSPLGSRDLRLHL*KTIVLR
Trigger: GCGAAGGACGATGGTTTTGCAAAGATGAAGTCTAAG...ATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR GCA 90 bp AACTACACAAGGTCTGGAAAAATATTCATCTCACAACACATACATGGTTTTCCCGCCTCAAGCCTCAAGTaGCCTTCTCTCTCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: NYTRSGKIFISQHIHGFPASSLK*PSLSRP
Trigger: AGGCCGGGAGAGAGAAGGGCACTTGAGGCTTGAGGC...GGGAAAACCATGTATGTGTTGTGAGATGAATATTTTTCCAGACCTTGTGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR GCA 90 bp GGAGGAAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCAAAATGATTTTCAACAAATaGAGGGGAGGGAAAGATTGC +
Preference number: 2 (lower is better)
Translates to: GGNGCGFFHLHLLGPGIKMIFNK*RGGKDC
Trigger: GCAATCTTTCCCTCCCCTGCATTTGTTGAAAATCAT...TTTGATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 90 bp ACCTCAGATGCTGATATATGTACGTACTATGTAGATTTGTTTACATaGCACGTGGATGTGCACCAGTGGTGCTTGGAGGAAATGGGTGTG +
Preference number: 2 (lower is better)
Translates to: TSDADICTYYVDLFT*HVDVHQWCLEEMGV
Trigger: CACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGCATCTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR GCA 90 bp ACCTCAGATGCTGATATATGTACGTACTATGTAGATTTGTTTACATTGCACGTGGATGTGCACCAGTGGTaGTTGGAGGAAATGGGTGTG +
Preference number: 2 (lower is better)
Translates to: TSDADICTYYVDLFTLHVDVHQW*LEEMGV
Trigger: CACACCCATTTCCTCCAAGCACCACTGGTGCACATC...CACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGCATCTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR TCA 90 bp ACTACACAAGGTCTGGAAAAATATTCATCTCACAACACATACATGGTTTTCCCTGGAGGGAAAGATTGCTaGCAGTCACAAGGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: TTQGLEKYSSHNTYMVFPGGKDC*QSQGGS
Trigger: ACTTCCACCTTGTGACTGTCAGCAATCTTTCCCTCC...AGGGAAAACCATGTATGTGTTGTGAGATGAATATTTTTCCAGACCTTGTGTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp GCTGATATATGTACGTACTATGTAGATTTGTTTACATTGCACGTGGATGTGCACTGGAGGAAATGGGTGTaGATTCTTCCACCTTCACCT +
Preference number: 2 (lower is better)
Translates to: ADICTYYVDLFTLHVDVHWRKWV*ILPPSP
Trigger: AGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCA...GTGCACATCCACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp TCCAAGTGGTTTACAGCTTTCTTCTTACTCAGTAAAACCCGGGAGGAACAGAATAGTCACCTGACTTCCTaGCCACCAATCTTTTATTTT +
Preference number: 2 (lower is better)
Translates to: SKWFTAFFLLSKTREEQNSHLTS*PPIFYF
Trigger: AAAATAAAAGATTGGTGGCCAGGAAGTCAGGTGACT...ATTCTGTTCCTCCCGGGTTTTACTGAGTAAGAAGAAAGCTGTAAACCACTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp ACCTCAGATGCTGATATATGTACGTACTATGTAGATTTGTTTACATTGCACGTGCTGACAGTCACAAGGTaGAAGTCAGAAGAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: TSDADICTYYVDLFTLHVLTVTR*KSEESS
Trigger: AGAGGACTCTTCTGACTTCCACCTTGTGACTGTCAG...CACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGCATCTGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CCA 90 bp ACCTCAGATGCTGATATATGTACGTACTATGTAGATTTGTTTACATTGCACGTGTCTGAAATGTCCAAGTaGTTTACAGCTTTCTTCTTA +
Preference number: 2 (lower is better)
Translates to: TSDADICTYYVDLFTLHVSEMSK*FTAFFL
Trigger: TAAGAAGAAAGCTGTAAACCACTTGGACATTTCAGA...CACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGCATCTGAGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp TCTCCTGTAGCCCAGGCTGGCCTCCAACTCGCTACATaGCGGAGGATGACCTTGAAGTCCGGTCCTCCGGCC +
Preference number: 3 (lower is better)
Translates to: SPVAQAGLQLAT*RRMTLKSGPPA
Trigger: GGCCGGAGGACCGGACTTCAAGGTCATCCTCCGCCATGTAGCGAGTTGGAGGCCAGCCTGGGCTACAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR GCA 72 bp AGCCTCAAGCCTCAAGTGCCCTTCTCTCTCCCGGCCTaGTTCATTCCACCCTGCCCACGGCTGGATTCTGGC +
Preference number: 3 (lower is better)
Translates to: SLKPQVPFSLPA*FIPPCPRLDSG
Trigger: GCCAGAATCCAGCCGTGGGCAGGGTGGAATGAAGCAGGCCGGGAGAGAGAAGGGCACTTGAGGCTTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp CTCTCCCGGCCTGCTTCATTCCACCCTGCCCACGGCTaGATTCTGGCATGGATTCCCCACCTCATGACATTT +
Preference number: 3 (lower is better)
Translates to: LSRPASFHPAHG*ILAWIPHLMTF
Trigger: AAATGTCATGAGGTGGGGAATCCATGCCAGAATCCAGCCGTGGGCAGGGTGGAATGAAGCAGGCCGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp GCTTCATTCCACCCTGCCCACGGCTGGATTCTGGCATaGATTCCCCACCTCATGACATTTGCCCAGACATCT +
Preference number: 3 (lower is better)
Translates to: ASFHPAHGWILA*IPHLMTFAQTS
Trigger: AGATGTCTGGGCAAATGTCATGAGGTGGGGAATCCATGCCAGAATCCAGCCGTGGGCAGGGTGGAATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp TGCACGTGGATGTGCACCAGTGGTGCTTGGAGGAAATaGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: CTWMCTSGAWRK*VWILPPSPLGS
Trigger: GGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp GAGCCAAAACCCTACCCTACCTTGATTCAGAAGGAATaGGAGCAGGGCAAGAAGGCTTGGGGTCCATCCTCA +
Preference number: 3 (lower is better)
Translates to: EPKPYPTLIQKE*EQGKKAWGPSS
Trigger: TGAGGATGGACCCCAAGCCTTCTTGCCCTGCTCCCATTCCTTCTGAATCAAGGTAGGGTAGGGTTTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp TGGATGTGCACCAGTGGTGCTTGGAGGAAATGGGTGTaGATTCTTCCACCTTCACCTCTTGGGTCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: WMCTSGAWRKWV*ILPPSPLGSRD
Trigger: ATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp AACCCGGGAGGAACAGAATCTAGCAAGCACATCCCCTaGTTTCTTCCCGCATCTCCGCTGATTTCTATGGTC +
Preference number: 3 (lower is better)
Translates to: NPGGTESSKHIP*FLPASPLISMV
Trigger: GACCATAGAAATCAGCGGAGATGCGGGAAGAAACCAGGGGATGTGCTTGCTAGATTCTGTTCCTCCCGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CAA 90 bp TTCTTCTTACTCAGTAAAACCCGGGAGGAACAGAATCTAGCAAGCACATCCCCTCAGGGGAGGGAAAGATaGCTGACAGTCACAAGGTGG +
Preference number: 3 (lower is better)
Translates to: FFLLSKTREEQNLASTSPQGRER*LTVTRW
Trigger: CCACCTTGTGACTGTCAGCAATCTTTCCCTCCCCTG...AGGGGATGTGCTTGCTAGATTCTGTTCCTCCCGGGTTTTACTGAGTAAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp CAAGAAGGCTTGGGGTCCATCCTCAGCACCCAAGATTaGGGGATAACTAGACTGGTACCAGTTCATATATGC +
Preference number: 3 (lower is better)
Translates to: QEGLGSILSTQD*GITRLVPVHIC
Trigger: GCATATATGAACTGGTACCAGTCTAGTTATCCCCCAATCTTGGGTGCTGAGGATGGACCCCAAGCCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp TGTTTACATTGCACGTGGATGTGCACCAGTGGTGCTTaGAGGAAATGGGTGTGGATTCTTCCACCTTCACCT +
Preference number: 3 (lower is better)
Translates to: CLHCTWMCTSGA*RKWVWILPPSP
Trigger: AGGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR GCA 72 bp GATTTGTTTACATTGCACGTGGATGTGCACCAGTGGTaGTTGGAGGAAATGGGTGTGGATTCTTCCACCTTC +
Preference number: 3 (lower is better)
Translates to: DLFTLHVDVHQW*LEEMGVDSSTF
Trigger: GAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CAA 90 bp TCCAAGTGGTTTACAGCTTTCTTCTTACTCAGTAAAACCCGGGAGGAACAGAATAAGAGTCCTCTTTGCTaGTCAGCCTCAAGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: SKWFTAFFLLSKTREEQNKSPLC*SASSLK
Trigger: CTTGAGGCTTGAGGCTGACAAGCAAAGAGGACTCTT...ATTCTGTTCCTCCCGGGTTTTACTGAGTAAGAAGAAAGCTGTAAACCACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp GACGATGGGACGACCCTCAATTCTGAAATGTCCAAGTaGTTTACAGCTTTCTTCTTACTCAGTAAAACCCGG +
Preference number: 3 (lower is better)
Translates to: DDGTTLNSEMSK*FTAFFLLSKTR
Trigger: CCGGGTTTTACTGAGTAAGAAGAAAGCTGTAAACCACTTGGACATTTCAGAATTGAGGGTCGTCCCATCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR-3UTR CAA 90 bp AACTACACAAGGTCTGGAAAAATATTCATCTCACAACACATACATGGTTTTCCCCCCAGACATCTGCCTTaGCCCTTGATTCTAGGAGTC +
Preference number: 3 (lower is better)
Translates to: NYTRSGKIFISQHIHGFPPRHLP*PLILGV
Trigger: GACTCCTAGAATCAAGGGCAAAGGCAGATGTCTGGG...GGGAAAACCATGTATGTGTTGTGAGATGAATATTTTTCCAGACCTTGTGTAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CCA 72 bp TCATCTATTTCCGCATGGTTACAACTACACAAGGTCTaGAAAAATATTCATCTCACAACACATACATGGTTT +
Preference number: 3 (lower is better)
Translates to: SSISAWLQLHKV*KNIHLTTHTWF
Trigger: AAACCATGTATGTGTTGTGAGATGAATATTTTTCCAGACCTTGTGTAGTTGTAACCATGCGGAAATAGATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS-3UTR CCA 90 bp GAAGGCTTGGGGTCCATCCTCAGCACCCAAGATTGGGGGATAACTAGACTGGTACGAAGGCCGCCTCCCTaGCCCTGCAGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: EGLGSILSTQDWGITRLVRRPPP*PCSPPR
Trigger: TCGTGGAGGGCTGCAGGGCCAGGGAGGCGGCCTTCG...TACCAGTCTAGTTATCCCCCAATCTTGGGTGCTGAGGATGGACCCCAAGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS-3UTR GCA 90 bp GGAGGAAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCAAACTTCGGGGACCGGACTaGCTCCGCCCAGTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GGNGCGFFHLHLLGPGIKLRGPD*LRPVPP
Trigger: AGGTGGGACTGGGCGGAGGCAGTCCGGTCCCCGAAG...TTTGATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS-3UTR GCA 90 bp AAATGGGTGTGGATTCTTCCACCTTCACCTCTTGGGTCCAGGGATCAAATTCAGCCGCCTCCCTGGCCCTaGAGCCCTCCACGAACAGCC +
Preference number: 4 (lower is better)
Translates to: KWVWILPPSPLGSRDQIQPPPWP*SPPRTA
Trigger: GGCTGTTCGTGGAGGGCTGCAGGGCCAGGGAGGCGG...CTGAATTTGATCCCTGGACCCAAGAGGTGAAGGTGGAAGAATCCACACCCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS-3UTR CCA 90 bp TTCTTCTTACTCAGTAAAACCCGGGAGGAACAGAATCTAGCAAGCACATCCCCTTGGGCTGGGAGGCTGTaGCCAGCGGGTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FFLLSKTREEQNLASTSPWAGRL*PAGLPG
Trigger: CCCAGGAAGACCCGCTGGCCACAGCCTCCCAGCCCA...AGGGGATGTGCTTGCTAGATTCTGTTCCTCCCGGGTTTTACTGAGTAAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp CTTGATTCAGAAGGAATGGGAGCAGGGCAAGAAGGCTaGGGGTCCATCCTCAGCACCCAAGATTGGGGGATA +
Preference number: 4 (lower is better)
Translates to: LDSEGMGAGQEG*GSILSTQDWGI
Trigger: TATCCCCCAATCTTGGGTGCTGAGGATGGACCCCAAGCCTTCTTGCCCTGCTCCCATTCCTTCTGAATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp CAGTCACAAGGTGGAAGTCAGAAGAGTCCTCTTTGCTaGTCAGCCTCAAGCCTCAAGTGCCCTTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QSQGGSQKSPLC*SASSLKCPSLS
Trigger: GGAGAGAGAAGGGCACTTGAGGCTTGAGGCTGACAAGCAAAGAGGACTCTTCTGACTTCCACCTTGTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp CTGACAGTCACAAGGTGGAAGTCAGAAGAGTCCTCTTaGCTTGTCAGCCTCAAGCCTCAAGTGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LTVTRWKSEESS*LVSLKPQVPFS
Trigger: AGAGAAGGGCACTTGAGGCTTGAGGCTGACAAGCAAAGAGGACTCTTCTGACTTCCACCTTGTGACTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp ACACCTTTAACCACTGAGCCAAAACCCTACCCTACCTaGATTCAGAAGGAATGGGAGCAGGGCAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TPLTTEPKPYPT*IQKEWEQGKKA
Trigger: AGCCTTCTTGCCCTGCTCCCATTCCTTCTGAATCAAGGTAGGGTAGGGTTTTGGCTCAGTGGTTAAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp TTGTTTACATTGCACGTGGATGTGCACCAGTGGTGCTaGGAGGAAATGGGTGTGGATTCTTCCACCTTCACC +
Preference number: 4 (lower is better)
Translates to: LFTLHVDVHQWC*EEMGVDSSTFT
Trigger: GGTGAAGGTGGAAGAATCCACACCCATTTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS-3UTR CCA 90 bp ACCTCAGATGCTGATATATGTACGTACTATGTAGATTTGTTTACATTGCACGTGTTTCGTGGAGCAGCCTaGTGGGGATCAGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TSDADICTYYVDLFTLHVFRGAA*WGSGGW
Trigger: CCAACCCCCTGATCCCCACCAGGCTGCTCCACGAAA...CACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGCATCTGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
3UTR CAA 72 bp GCTGATATATGTACGTACTATGTAGATTTGTTTACATaGCACGTGGATGTGCACCAGTGGTGCTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ADICTYYVDLFT*HVDVHQWCLEE
Trigger: TTCCTCCAAGCACCACTGGTGCACATCCACGTGCAATGTAAACAAATCTACATAGTACGTACATATATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 90 bp GCCCGGGAGCCAGGCCCGGGGCCGGCGCCATGGGCTGGGAGGCTGTaGCCAGCGGGTCTTCCTGGGCTTCGGGGACCGGACTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: AREPGPGPAPWAGRL*PAGLPGLRGPDCLR
Trigger: GCGGAGGCAGTCCGGTCCCCGAAGCCCAGGAAGACCCGCTGGCCACAGCCTCCCAGCCCATGGCGCCGGCCCCGGGCCTGGCTCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 90 bp GGGGCCGGCGCCATGGGCTGGGAGGCTGTGGCCAGCGGGTCTTCCTaGGCTTCGGGGACCGGACTGCCTCCGCCCAGTCCCACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GAGAMGWEAVASGSS*ASGTGLPPPSPTCR
Trigger: CCTGCAGGTGGGACTGGGCGGAGGCAGTCCGGTCCCCGAAGCCCAGGAAGACCCGCTGGCCACAGCCTCCCAGCCCATGGCGCCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS GCA 90 bp GGGAGGCTGTGGCCAGCGGGTCTTCCTGGGCTTCGGGGACCGGACTaGCTCCGCCCAGTCCCACCTGCAGGACGTCGCCGACGCCGTTCA +
Preference number: 5 (lower is better)
Translates to: GRLWPAGLPGLRGPD*LRPVPPAGRRRRRS
Trigger: TGAACGGCGTCGGCGACGTCCTGCAGGTGGGACTGGGCGGAGGCAGTCCGGTCCCCGAAGCCCAGGAAGACCCGCTGGCCACAGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 90 bp CCACGAACAGCCGGCGGCGCTCCTCGATTTCGTGGAGCAGCCTGGTaGGGATCAGGGGGTTGGTGTGCAGATAGTGTTGGAACATCCGCT +
Preference number: 5 (lower is better)
Translates to: PRTAGGAPRFRGAAW*GSGGWCADSVGTSA
Trigger: AGCGGATGTTCCAACACTATCTGCACACCAACCCCCTGATCCCCACCAGGCTGCTCCACGAAATCGAGGAGCGCCGCCGGCTGTTCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 90 bp CCTCCACGAACAGCCGGCGGCGCTCCTCGATTTCGTGGAGCAGCCTaGTGGGGATCAGGGGGTTGGTGTGCAGATAGTGTTGGAACATCC +
Preference number: 5 (lower is better)
Translates to: PPRTAGGAPRFRGAA*WGSGGWCADSVGTS
Trigger: GGATGTTCCAACACTATCTGCACACCAACCCCCTGATCCCCACCAGGCTGCTCCACGAAATCGAGGAGCGCCGCCGGCTGTTCGTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 72 bp CCAGGCCCGGGGCCGGCGCCATGGGCTGGGAGGCTGTaGCCAGCGGGTCTTCCTGGGCTTCGGGGACCGGAC +
Preference number: 6 (lower is better)
Translates to: PGPGPAPWAGRL*PAGLPGLRGPD
Trigger: GTCCGGTCCCCGAAGCCCAGGAAGACCCGCTGGCCACAGCCTCCCAGCCCATGGCGCCGGCCCCGGGCCTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 72 bp TGCCCGGGAGCCAGGCCCGGGGCCGGCGCCATGGGCTaGGAGGCTGTGGCCAGCGGGTCTTCCTGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: CPGARPGAGAMG*EAVASGSSWAS
Trigger: CGAAGCCCAGGAAGACCCGCTGGCCACAGCCTCCCAGCCCATGGCGCCGGCCCCGGGCCTGGCTCCCGGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS GCA 72 bp GCTTCGGGGACCGGACTGCCTCCGCCCAGTCCCACCTaGAGGACGTCGCCGACGCCGTTCATGGGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: ASGTGLPPPSPT*RTSPTPFMGLR
Trigger: CCTGAGCCCCATGAACGGCGTCGGCGACGTCCTGCAGGTGGGACTGGGCGGAGGCAGTCCGGTCCCCGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS GCA 72 bp TGGCCAGCGGGTCTTCCTGGGCTTCGGGGACCGGACTaGCTCCGCCCAGTCCCACCTGCAGGACGTCGCCGA +
Preference number: 6 (lower is better)
Translates to: WPAGLPGLRGPD*LRPVPPAGRRR
Trigger: TCGGCGACGTCCTGCAGGTGGGACTGGGCGGAGGCAGTCCGGTCCCCGAAGCCCAGGAAGACCCGCTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 72 bp CCAGTCCCACCTGCAGGACGTCGCCGACGCCGTTCATaGGGCTCAGGTCCGGGATCCTGCTCTCTCCGGGAA +
Preference number: 6 (lower is better)
Translates to: PVPPAGRRRRRS*GSGPGSCSLRE
Trigger: TTCCCGGAGAGAGCAGGATCCCGGACCTGAGCCCCATGAACGGCGTCGGCGACGTCCTGCAGGTGGGACTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 72 bp GCCGGCGGCGCTCCTCGATTTCGTGGAGCAGCCTGGTaGGGATCAGGGGGTTGGTGTGCAGATAGTGTTGGA +
Preference number: 6 (lower is better)
Translates to: AGGAPRFRGAAW*GSGGWCADSVG
Trigger: TCCAACACTATCTGCACACCAACCCCCTGATCCCCACCAGGCTGCTCCACGAAATCGAGGAGCGCCGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4
CDS CCA 72 bp ACAGCCGGCGGCGCTCCTCGATTTCGTGGAGCAGCCTaGTGGGGATCAGGGGGTTGGTGTGCAGATAGTGTT +
Preference number: 6 (lower is better)
Translates to: TAGGAPRFRGAA*WGSGGWCADSV
Trigger: AACACTATCTGCACACCAACCCCCTGATCCCCACCAGGCTGCTCCACGAAATCGAGGAGCGCCGCCGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000094651.4