Pregenerated sensors for EID2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046058

Ensembl transcript IDs: ENSMUST00000059596.8

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	AGAAACCTCGTCCTAAAACCAGCTTTCTCTTCGAGTCTTCTTCGTCGTGGGCTCCGCTTTTCCTCCCTCTaGGGAAGCGCTGCCTCTCAA	+
Preference number: 2 (lower is better) Translates to: RNLVLKPAFSSSLLRRGLRFSSL*GSAASQ Trigger: TTGAGAGGCAGCGCTTCCTCAGAGGGAGGAAAAGCG...GAGCCCACGACGAAGAAGACTCGAAGAGAAAGCTGGTTTTAGGACGAGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR-3UTR GCA 90 bp	TTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAAATTTCAACTGATATGCGGAGGTCTTGGTaGCGTGCCCTCCCCGCAGTC	+
Preference number: 2 (lower is better) Translates to: LTKPRGWTFSITQEISTDMRRSW*RALPAV Trigger: GACTGCGGGGAGGGCACGGCACCAAGACCTCCGCAT...ATCAGTTGAAATTTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR-3UTR GCA 90 bp	GTCCTTTACTTATTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAAGGTAGGAGTCTACGATaGTTTCCCTCCCCACCCCCA	+
Preference number: 2 (lower is better) Translates to: VLYLLTKPRGWTFSITQEGRSLR*FPSPPP Trigger: TGGGGGTGGGGAGGGAAAGCATCGTAGACTCCTACC...TTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAATAAGTAAAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR-3UTR CCA 90 bp	TCAAGTTCTCCACAGAAACCTCGTCCTAAAACCAGCTTTCTCTTCGAGTCTTCTAACCAAGTTGCAGGATaGGGTTTCACTTGGATGCGG	+
Preference number: 2 (lower is better) Translates to: SSSPQKPRPKTSFLFESSNQVAG*GFTWMR Trigger: CCGCATCCAAGTGAAACCCCATCCTGCAACTTGGTT...AGAAGACTCGAAGAGAAAGCTGGTTTTAGGACGAGGTTTCTGTGGAGAACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR CCA 72 bp	CCTAAAACCAGCTTTCTCTTCGAGTCTTCTTCGTCGTaGGCTCTACTACTGGCAATTTTAAGTCTTTACAGT	+
Preference number: 3 (lower is better) Translates to: PKTSFLFESSSS*ALLLAILSLYS Trigger: ACTGTAAAGACTTAAAATTGCCAGTAGTAGAGCCCACGACGAAGAAGACTCGAAGAGAAAGCTGGTTTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR-3UTR CAA 90 bp	GTCCTTTACTTATTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAATTTCTTAAAACCAAGTaGCAGGATGGGGTTTCACTT	+
Preference number: 3 (lower is better) Translates to: VLYLLTKPRGWTFSITQEFLKTK*QDGVSL Trigger: AAGTGAAACCCCATCCTGCAACTTGGTTTTAAGAAA...TTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAATAAGTAAAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR CCA 72 bp	AAAACCGTCCTTTACTTATTAACGAAGCCACGAGGATaGACCTTTTCCATAACACAAGAAATTTCAACTGAT	+
Preference number: 3 (lower is better) Translates to: KTVLYLLTKPRG*TFSITQEISTD Trigger: ATCAGTTGAAATTTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAATAAGTAAAGGACGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
3UTR TCA 72 bp	TATACAATATTTATGTTGTTCGCCATTCACAATGTCTaGGACACAAAATCCCTCTTACACTATACACGCTTG	+
Preference number: 3 (lower is better) Translates to: YTIFMLFAIHNV*DTKSLLHYTRL Trigger: CAAGCGTGTATAGTGTAAGAGGGATTTTGTGTCTCAGACATTGTGAATGGCGAACAACATAAATATTGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR GCA 90 bp	AAAACCAAGTTGCAGGATGGGGTTTCACTTGGATGCGGAGGTCTTGGTGCCGTGCAGCCGGGCCACCTCTaGCATCCGGGCTTCCCTGGA	+
Preference number: 4 (lower is better) Translates to: KTKLQDGVSLGCGGLGAVQPGHL*HPGFPG Trigger: TCCAGGGAAGCCCGGATGGCAGAGGTGGCCCGGCTG...CACGGCACCAAGACCTCCGCATCCAAGTGAAACCCCATCCTGCAACTTGGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR TCA 90 bp	AGAAACCTCGTCCTAAAACCAGCTTTCTCTTCGAGTCTTCTTCGTCGTGGGCTCTCTGCGGGGCGCTGCTaGCTGCGGGCAGCTGCGACA	+
Preference number: 4 (lower is better) Translates to: RNLVLKPAFSSSLLRRGLSAGRC*LRAAAT Trigger: TGTCGCAGCTGCCCGCAGTCAGCAGCGCCCCGCAGA...GAGCCCACGACGAAGAAGACTCGAAGAGAAAGCTGGTTTTAGGACGAGGTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR GCA 90 bp	TTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAAATTTCAACTGATCCTGCCTTCCCGGGCTaGAGCCACCCGGCCTCCCCT	+
Preference number: 4 (lower is better) Translates to: LTKPRGWTFSITQEISTDPAFPG*SHPASP Trigger: AGGGGAGGCCGGGTGGCTGCAGCCCGGGAAGGCAGG...ATCAGTTGAAATTTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR GCA 90 bp	TTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAAATTTCAACTGATCTCTATGTCGAAGGCTaGCTCCCTGGCTCGGCAGGC	+
Preference number: 4 (lower is better) Translates to: LTKPRGWTFSITQEISTDLYVEG*LPGSAG Trigger: GCCTGCCGAGCCAGGGAGGCAGCCTTCGACATAGAG...ATCAGTTGAAATTTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR TCA 90 bp	GTCCTTTACTTATTAACGAAGCCACGAGGATGGACCTTTTCCATAACACAAGAACTTCTATTAGAGGATTaGTCACCTCTGATGCAGTCA	+
Preference number: 4 (lower is better) Translates to: VLYLLTKPRGWTFSITQELLLED*SPLMQS Trigger: TGACTGCATCAGAGGTGATCAATCCTCTAATAGAAG...TTCTTGTGTTATGGAAAAGGTCCATCCTCGTGGCTTCGTTAATAAGTAAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS GCA 90 bp	CCCGCCGCCTACCTCGGCCTGCGGGAGCCGGCGGTCGCGGCTCGCTaGTCCCGTCTGCGGGGCGCTGCTGACTGCGGGCAGCTGCGACAT	+
Preference number: 5 (lower is better) Translates to: PAAYLGLREPAVAAR*SRLRGAADCGQLRH Trigger: ATGTCGCAGCTGCCCGCAGTCAGCAGCGCCCCGCAGACGGGAGCAGCGAGCCGCGACCGCCGGCTCCCGCAGGCCGAGGTAGGCGGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS GCA 90 bp	GCATGTACGGCATCGCCGCCAGGCCGCCCGCCCTGGACCGGGGCCTaGCCTCCGGAGCCTCCTCCTCCAGCGGATCGCCCAGCAGCCGGG	+
Preference number: 5 (lower is better) Translates to: ACTASPPGRPPWTGA*PPEPPPPADRPAAG Trigger: CCCGGCTGCTGGGCGATCCGCTGGAGGAGGAGGCTCCGGAGGGCAGGCCCCGGTCCAGGGCGGGCGGCCTGGCGGCGATGCCGTACATGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS CCA 90 bp	CCCTCTGGGGGTTACGCAGGTACTCTATGTCGAAGGCTGCCTCCCTaGCTCGGCAGGCCTCCACGAAGCGCCGCCGGCGCTCCTCCAGCT	+
Preference number: 5 (lower is better) Translates to: PSGGYAGTLCRRLPP*LGRPPRSAAGAPPA Trigger: AGCTGGAGGAGCGCCGGCGGCGCTTCGTGGAGGCCTGCCGAGCCAGGGAGGCAGCCTTCGACATAGAGTACCTGCGTAACCCCCAGAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS-3UTR CAA 90 bp	TCAAGTTCTCCACAGAAACCTCGTCCTAAAACCAGCTTTCTCTTCGAGTCTTCTTCTTCTATTAGAGGATaGATCACCTCTGATGCAGTC	+
Preference number: 5 (lower is better) Translates to: SSSPQKPRPKTSFLFESSSSIRG*ITSDAV Trigger: GACTGCATCAGAGGTGATCAATCCTCTAATAGAAGA...AGAAGACTCGAAGAGAAAGCTGGTTTTAGGACGAGGTTTCTGTGGAGAACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS GCA 72 bp	TACCTCGGCCTGCGGGAGCCGGCGGTCGCGGCTCGCTaGTCCCGTCTGCGGGGCGCTGCTGACTGCGGGCAG	+
Preference number: 6 (lower is better) Translates to: YLGLREPAVAAR*SRLRGAADCGQ Trigger: CTGCCCGCAGTCAGCAGCGCCCCGCAGACGGGAGCAGCGAGCCGCGACCGCCGGCTCCCGCAGGCCGAGGTA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059596.8
CDS GCA 72 bp	CCTCTGGGGGTTACGCAGGTACTCTATGTCGAAGGCTaGCTCCCTGGCTCGGCAGGCCTCCACGAAGCGCCG	+
Preference number: 6 (lower is better) Translates to: PLGVTQVLYVEG*LPGSAGLHEAP Trigger: CGGCGCTTCGTGGAGGCCTGCCGAGCCAGGGAGGCAGCCTTCGACATAGAGTACCTGCGTAACCCCCAGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059596.8