Pregenerated sensors for EID1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091337Ensembl transcript IDs: ENSMUST00000164756.4
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTTTAACACTCCTCCTTCCTCGATTCTCCTTTTCCACAATGCATaGTCATTCACTGTCCCGTCTTCTATTCCGAGAAACAAAAACCAA | + |
|
Preference number: 1 (lower is better) Translates to: RFNTPPSSILLFHNA*SFTVPSSIPRNKNQ Trigger: TTGGTTTTTGTTTCTCGGAATAGAAGACGGGACAGTGAATGACCATGCATTGTGGAAAAGGAGAATCGAGGAAGGAGGAGTGTTAAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGTGAGACCAAAGAGGAACGATTTGGTCTTTTTCTCCTCGCGATTCTCAGGCTTTTCCACAATGCATaGTCATTCACTGTCCCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PCETKEERFGLFLLAILRLFHNA*SFTVPS Trigger: AGACGGGACAGTGAATGACCATGCATTGTGGAAAAG...CCTGAGAATCGCGAGGAGAAAAAGACCAAATCGTTCCTCTTTGGTCTCACAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAGGCAGAGAGGGAGAGAGAGAATATGAATATCAGACACCCAGGTGGACTAAAATAGCAGAATGTTaGATCTCTCCCTCTCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ERGREGEREYEYQTPRWTKIAEC*ISPSQV Trigger: TACCTGAGAGGGAGAGATTCAACATTCTGCTATTTT...AGTCCACCTGGGTGTCTGATATTCATATTCTCTCTCTCCCTCTCTGCCTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCCTCGATTCTCCTTTTCCACAATGCATGGTCATTCACTGTCCCGTCTTCTTTGCACAGAACTATTTaGAATGAACCCCAAAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: PSSILLFHNAWSFTVPSSLHRTI*NEPQNS Trigger: GCTATTTTGGGGTTCATTCCAAATAGTTCTGTGCAA...AGAAGACGGGACAGTGAATGACCATGCATTGTGGAAAAGGAGAATCGAGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGAGACCAAAGAGGAACGATTTGGTCTTTTTCTCCTCGCGATTCTCAGGCAAAATAGCAGAATGTaGAATCTCTCCCTCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PCETKEERFGLFLLAILRQNSRM*NLSLSG Trigger: ACCTGAGAGGGAGAGATTCAACATTCTGCTATTTTG...CCTGAGAATCGCGAGGAGAAAAAGACCAAATCGTTCCTCTTTGGTCTCACAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCGATTCTCCTTTTCCACAATGCATGGTCATTCACTGTCCCGTCTTCTGCAGGAACACCTTGTTaGCTTCCTCCAGGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSILLFHNAWSFTVPSSAGTPC*LPPGRR Trigger: CCGCCGCCCTGGAGGAAGCCAACAAGGTGTTCCTGC...AGAAGACGGGACAGTGAATGACCATGCATTGTGGAAAAGGAGAATCGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS-3UTR CCA 90 bp | AACACTCCTCCTTCCTCGATTCTCCTTTTCCACAATGCATGGTCATTCACTGTCTCGATAAAAGCTAGCTaGTCGAAAGGGCTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTPPSSILLFHNAWSFTVSIKAS*SKGLFS Trigger: TGAGAAGAGCCCTTTCGACCAGCTAGCTTTTATCGA...GACAGTGAATGACCATGCATTGTGGAAAAGGAGAATCGAGGAAGGAGGAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS TCA 90 bp | TCGATAAAAGCTAGCTGGTCGAAAGGGCTCTTCTCACACCGCGCCTaGAAGCCGCCATCCAGGGCATCTCCGGCTCGCGCGGTTCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIKASWSKGLFSHRA*KPPSRASPARAVRR Trigger: CCTGCGAACCGCGCGAGCCGGAGATGCCCTGGATGGCGGCTTTCAGGCGCGGTGTGAGAAGAGCCCTTTCGACCAGCTAGCTTTTATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTCGATTCTCCTTTTCCACAATGCATGGTCATTCACTGTCCCGTCTTCTTCTTCGGTCAGTCGATaGACAACCATCAGCGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSSILLFHNAWSFTVPSSSSVSR*TTISEN Trigger: GTTTTCGCTGATGGTTGTCAATCGACTGACCGAAGA...AGAAGACGGGACAGTGAATGACCATGCATTGTGGAAAAGGAGAATCGAGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS CAA 90 bp | CCGCCATCCAGGGCATCTCCGGCTCGCGCGGTTCGCAGGAACACCTaGTTGGCTTCCTCCAGGGCGGCGGACACCCTGTGCATCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPSRASPARAVRRNT*LASSRAADTLCIAP Trigger: CGGCGCGATGCACAGGGTGTCCGCCGCCCTGGAGGAAGCCAACAAGGTGTTCCTGCGAACCGCGCGAGCCGGAGATGCCCTGGATGGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS CAA 72 bp | AGGGCATCTCCGGCTCGCGCGGTTCGCAGGAACACCTaGTTGGCTTCCTCCAGGGCGGCGGACACCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RASPARAVRRNT*LASSRAADTLC Trigger: GCACAGGGTGTCCGCCGCCCTGGAGGAAGCCAACAAGGTGTTCCTGCGAACCGCGCGAGCCGGAGATGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS TCA 72 bp | GCTAGCTGGTCGAAAGGGCTCTTCTCACACCGCGCCTaGAAGCCGCCATCCAGGGCATCTCCGGCTCGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASWSKGLFSHRA*KPPSRASPARA Trigger: CGCGCGAGCCGGAGATGCCCTGGATGGCGGCTTTCAGGCGCGGTGTGAGAAGAGCCCTTTCGACCAGCTAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS CCA 72 bp | CATCTCCGGCTCGCGCGGTTCGCAGGAACACCTTGTTaGCTTCCTCCAGGGCGGCGGACACCCTGTGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: HLRLARFAGTPC*LPPGRRTPCAS Trigger: CGATGCACAGGGTGTCCGCCGCCCTGGAGGAAGCCAACAAGGTGTTCCTGCGAACCGCGCGAGCCGGAGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS CAA 90 bp | TCTCGATCAATGATCTCATCACAACCGAGCTCTTCGGTCAGTCGATaGACAACCATCAGCGAAAACAGCTCTTCGATAAAAGCTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSMISSQPSSSVSR*TTISENSSSIKASW Trigger: CCAGCTAGCTTTTATCGAAGAGCTGTTTTCGCTGATGGTTGTCAATCGACTGACCGAAGAGCTCGGTTGTGATGAGATCATTGATCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||
| CDS CAA 72 bp | ATGATCTCATCACAACCGAGCTCTTCGGTCAGTCGATaGACAACCATCAGCGAAAACAGCTCTTCGATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: MISSQPSSSVSR*TTISENSSSIK Trigger: TTTTATCGAAGAGCTGTTTTCGCTGATGGTTGTCAATCGACTGACCGAAGAGCTCGGTTGTGATGAGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164756.4 |
||