Pregenerated sensors for EHF (Mus musculus)

Ensembl gene IDs: ENSMUSG00000012350

Ensembl transcript IDs: ENSMUST00000090475.10, ENSMUST00000111174.8, ENSMUST00000111176.9, ENSMUST00000125788.8, ENSMUST00000140503.8, ENSMUST00000151265.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	CTCCTGTTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATaGTCCCTGCCCTTGGCGAGCTTACAGTCTAATCAGCTGGGAACT	+
Preference number: 1 (lower is better) Translates to: LLLHPRYEDNRGDQT*SLPLASLQSNQLGT Trigger: AGTTCCCAGCTGATTAGACTGTAAGCTCGCCAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAACAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	AGTCCCCAGCTGAGGGTAACTCACCTGTTAACACTAAGTTTGCCATaGTGGTGTTTCCTTCTCTTAGTCAGTATTCCTCTGCAGGTCCAG	+
Preference number: 1 (lower is better) Translates to: SPQLRVTHLLTLSLP*WCFLLLVSIPLQVQ Trigger: CTGGACCTGCAGAGGAATACTGACTAAGAGAAGGAAACACCAGCATGGCAAACTTAGTGTTAACAGGTGAGTTACCCTCAGCTGGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR CCA 90 bp	TTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTaGGATCCAGGACCTTGCTTAATTTCATCAAGTCCTATAGGAGTC	+
Preference number: 1 (lower is better) Translates to: LSLLLGIPKNLWTCF*DPGPCLISSSPIGV Trigger: GACTCCTATAGGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 90 bp	CCCCAGCTGAGGGTAACTCACCTGTTAACACTAAGTTTGCCATGCTaGTGTTTCCTTCTCTTAGTCAGTATTCCTCTGCAGGTCCAGATC	+
Preference number: 1 (lower is better) Translates to: PQLRVTHLLTLSLPC*CFLLLVSIPLQVQI Trigger: GATCTGGACCTGCAGAGGAATACTGACTAAGAGAAGGAAACACCAGCATGGCAAACTTAGTGTTAACAGGTGAGTTACCCTCAGCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR GCA 90 bp	TGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTaGAGAACTGTTCCCACTGGTCCTCTCCAGATTCACCTACTCTCT	+
Preference number: 1 (lower is better) Translates to: CQETATLSQQHNLFI*RTVPTGPLQIHLLS Trigger: AGAGAGTAGGTGAATCTGGAGAGGACCAGTGGGAACAGTTCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 90 bp	TCCACTCACTATCTCCCAATTCAAGTCAAACTTCCCAGCATCTTTTaGGTTGATCCCACCAATCTGAGACCCTGGACTTTGTCCTCCCTA	+
Preference number: 1 (lower is better) Translates to: STHYLPIQVKLPSIF*VDPTNLRPWTLSSL Trigger: TAGGGAGGACAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAGTTTGACTTGAATTGGGAGATAGTGAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 90 bp	ATTCTCATCCAGCAGACACTGACATGTGGAACCAAGCAGGCTGTTTaGATTTCTTTTCAGCATAGGTGGGAGGCAAAGGAGAGTGTCACA	+
Preference number: 1 (lower is better) Translates to: ILIQQTLTCGTKQAV*ISFQHRWEAKESVT Trigger: TGTGACACTCTCCTTTGCCTCCCACCTATGCTGAAAAGAAATTCAAACAGCCTGCTTGGTTCCACATGTCAGTGTCTGCTGGATGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	TCTCCCAGAAGACAGTCATCATTCATTCATGAGAAGTTCTCCTGTTaGATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCC	+
Preference number: 1 (lower is better) Translates to: SPRRQSSFIHEKFSC*IPGMRITEVIRHAP Trigger: GGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAACAGGAGAACTTCTCATGAATGAATGATGACTGTCTTCTGGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 90 bp	ATTCTGAGACTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTaGTCCTCGCTCAAGGGTACTATTGTCCTCCTAGAGACATTTGAC	+
Preference number: 1 (lower is better) Translates to: ILRLNDCLHTVHFNW*SSLKGTIVLLETFD Trigger: GTCAAATGTCTCTAGGAGGACAATAGTACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	AGACTAGAAGTGTCTATAGATCTCTCTATTCTGAGACTGAACGACTaGCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGT	+
Preference number: 1 (lower is better) Translates to: RLEVSIDLSILRLND*LHTVHFNWWSSLKG Trigger: ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAGAATAGAGAGATCTATAGACACTTCTAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	AATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTCTaGAATATCTGCATTCTCTGTGCAAACAACTTCTCTTGCACTTTC	+
Preference number: 1 (lower is better) Translates to: NHTETSIDSALGTVF*NICILCANNFSCTF Trigger: GAAAGTGCAAGAGAAGTTGTTTGCACAGAGAATGCAGATATTGCAGAAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 90 bp	TTGGTGGTCCTCGCTCAAGGGTACTATTGTCCTCCTAGAGACATTTaGCAATATCTAGAAACACTTCAGATTGTCACAGTTACAAAATGC	+
Preference number: 1 (lower is better) Translates to: LVVLAQGYYCPPRDI*QYLETLQIVTVTKC Trigger: GCATTTTGTAACTGTGACAATCTGAAGTGTTTCTAGATATTGTCAAATGTCTCTAGGAGGACAATAGTACCCTTGAGCGAGGACCACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	TCCTCACATATATGGTGTTTCACTATGCACAAGGCACCCAGTAGGTaGTTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCT	+
Preference number: 1 (lower is better) Translates to: SSHIWCFTMHKAPSR*FNKVLKSNVSASPS Trigger: AGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAAGCACCTACTGGGTGCCTTGTGCATAGTGAAACACCATATATGTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 90 bp	TCCAGGACCTTGCTTAATTTCATCAAGTCCTATAGGAGTCTCAGATaGTCTGAGTCTTGTGAAGTATTAATGGTCCATTACTTGATTTCA	+
Preference number: 1 (lower is better) Translates to: SRTLLNFIKSYRSLR*SESCEVLMVHYLIS Trigger: TGAAATCAAGTAATGGACCATTAATACTTCACAAGACTCAGATCATCTGAGACTCCTATAGGACTTGATGAAATTAAGCAAGGTCCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 90 bp	AGCCAGGTGGCAAGAAGAGTGAGATTTATACAGATAGCTACAGAATaGTTAATCCAAATTCAGCTGAACTCTGAAGTCTACATGTTTCAA	+
Preference number: 1 (lower is better) Translates to: SQVARRVRFIQIATE*LIQIQLNSEVYMFQ Trigger: TTGAAACATGTAGACTTCAGAGTTCAGCTGAATTTGGATTAATCATTCTGTAGCTATCTGTATAAATCTCACTCTTCTTGCCACCTGGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 90 bp	CATACATCATTGCATTTATTTGACTTTGGTTTTCATGTGAAGCTCTaGAAAGAATCTCCTCCATTTATTCTCATCCTGCTGTCCCTACTA	+
Preference number: 1 (lower is better) Translates to: HTSLHLFDFGFHVKL*KESPPFILILLSLL Trigger: TAGTAGGGACAGCAGGATGAGAATAAATGGAGGAGATTCTTTTCAGAGCTTCACATGAAAACCAAAGTCAAATAAATGCAATGATGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 90 bp	ACTGTCTTCTGCAATATCTGCATTCTCTGTGCAAACAACTTCTCTTaGACTTTCCATACATCATTGCATTTATTTGACTTTGGTTTTCAT	+
Preference number: 1 (lower is better) Translates to: TVFCNICILCANNFS*TFHTSLHLFDFGFH Trigger: ATGAAAACCAAAGTCAAATAAATGCAATGATGTATGGAAAGTGCAAGAGAAGTTGTTTGCACAGAGAATGCAGATATTGCAGAAGACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGTGCCAAGAAACTaGCACTCTCAGCCAACAGCA	+
Preference number: 2 (lower is better) Translates to: TQALSLLLGIPKNLWTCFWVPRN*HSQPTA Trigger: TGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCCA...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTTGAGGTCACACAGATaGTTAGGTGCAGAGAACACA	+
Preference number: 2 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPLRSHR*LGAENT Trigger: TGTGTTCTCTGCACCTAAGCATCTGTGTGACCTCAA...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTATTTGCTGTGTGTTTTaGTTTGTGTCCCAAGGGCTG	+
Preference number: 2 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPICCVF*FVSQGL Trigger: CAGCCCTTGGGACACAAACCAAAACACACAGCAAAT...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTACAGAACTGTTCCCACTaGTCCTCTCCAGATTCACCT	+
Preference number: 2 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLQNCSH*SSPDSP Trigger: AGGTGAATCTGGAGAGGACCAGTGGGAACAGTTCTG...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 90 bp	CCCAGCATCTTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTaGTCCTCCCTACCCAATCCCATTTCTCTTGAGGTCACACAGATG	+
Preference number: 2 (lower is better) Translates to: PSIFWVDPTNLRPWT*SSLPNPISLEVTQM Trigger: CATCTGTGTGACCTCAAGAGAAATGGGATTGGGTAGGGAGGACAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTACACAGATGCTTAGGTaGAGAGAACACATTGCCTTT	+
Preference number: 2 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPTQMLR*REHIAF Trigger: AAAGGCAATGTGTTCTCTGCACCTAAGCATCTGTGT...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	GATCAGACATGCTCCCTGCCCTTGGCGAGCTTACAGTCTAATCAGCTGGGAACTGACATCCATAGACTCTaGCTTAGGCACTGTCTTCTG	+
Preference number: 2 (lower is better) Translates to: DQTCSLPLASLQSNQLGTDIHRL*LRHCLL Trigger: CAGAAGACAGTGCCTAAGGCAGAGTCTATGGATGTC...AGTTCCCAGCTGATTAGACTGTAAGCTCGCCAAGGGCAGGGAGCATGTCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTCCCGTCTATTTAAATaGGAACTGGGTGCCAAGAAA	+
Preference number: 2 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPSRLFK*ELGAKK Trigger: TTTCTTGGCACCCAGTTCCCATTTAAATAGACGGGA...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCCGTCCGGTTCTTCATTaGTCAGAATCCATTTGCTGT	+
Preference number: 2 (lower is better) Translates to: TQALSLLLGIPKNLWTCFRPVLH*SESICC Trigger: ACAGCAAATGGATTCTGATCAATGAAGAACCGGACG...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 90 bp	GTCCTGAGTCCCCAGCTGAGGGTAACTCACCTGTTAACACTAAGTTaGCCATGCTGGTGTTTCCTTCTCTTAGTCAGTATTCCTCTGCAG	+
Preference number: 2 (lower is better) Translates to: VLSPQLRVTHLLTLS*PCWCFLLLVSIPLQ Trigger: CTGCAGAGGAATACTGACTAAGAGAAGGAAACACCAGCATGGCAAACTTAGTGTTAACAGGTGAGTTACCCTCAGCTGGGGACTCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR-3UTR TCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTCCTCCTAGAGACATTTaGCAATATCTAGAAACACTT	+
Preference number: 2 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPPPRDI*QYLETL Trigger: AAGTGTTTCTAGATATTGTCAAATGTCTCTAGGAGG...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	TTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCCTGCCCTTGTTGAGGTCACACAGATaGTTAGGTGCAGAGAACACA	+
Preference number: 2 (lower is better) Translates to: LHPRYEDNRGDQTCSLPLLRSHR*LGAENT Trigger: TGTGTTCTCTGCACCTAAGCATCTGTGTGACCTCAA...CAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGACTTCCCAGCATCTTTTaGGTTGATCCCACCAATCTG	+
Preference number: 2 (lower is better) Translates to: GCQETATLSQQHNLFICRLPSIF*VDPTNL Trigger: CAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAG...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	TTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCCTGCCCTTGCAGAAAAGTAGTCTTTaGGATATTTACGTCCGGTTC	+
Preference number: 2 (lower is better) Translates to: LHPRYEDNRGDQTCSLPLQKSSL*DIYVRF Trigger: GAACCGGACGTAAATATCTCAAAGACTACTTTTCTG...CAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCCTGAGACTGAACGACTaGCTTCATACTGTCCATTTC	+
Preference number: 2 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSLRLND*LHTVHF Trigger: GAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAG...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTATTGACTTCAAGGTCTTaGTTTTGCTTTACTCTAGAG	+
Preference number: 2 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLLTSRS*FCFTLE Trigger: CTCTAGAGTAAAGCAAAAGCAAGACCTTGAAGTCAA...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	CTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGCAAACAACTTCTCTTaGACTTTCCATACATCATTG	+
Preference number: 2 (lower is better) Translates to: LRHCLSCSAYRRTCGPVSANNFS*TFHTSL Trigger: CAATGATGTATGGAAAGTGCAAGAGAAGTTGTTTGC...AGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	AAACTTCCCAGCATCTTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTTGATTTGCTGTGTGTTTTaGTTTGTGTCCCAAGGGCTG	+
Preference number: 2 (lower is better) Translates to: KLPSIFWVDPTNLRPWTLICCVF*FVSQGL Trigger: CAGCCCTTGGGACACAAACCAAAACACACAGCAAAT...CAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGCAGCATCTTTTGGGTTaGTCCCACCAATCTGAGACC	+
Preference number: 2 (lower is better) Translates to: KSHSSKKQQNSHPADTDMQHLLG*SHQSET Trigger: GGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTG...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGAGATGAAGGGTCTACATaGAAATTGTCCATAACTGAG	+
Preference number: 2 (lower is better) Translates to: GCQETATLSQQHNLFICRDEGST*KLSITE Trigger: CTCAGTTATGGACAATTTTCATGTAGACCCTTCATC...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	AGAGAGAGAGAATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTACACAGATGCTTAGGTaGAGAGAACACATTGCCTTT	+
Preference number: 2 (lower is better) Translates to: RERESHRDIHRLCLRHCLTQMLR*REHIAF Trigger: AAAGGCAATGTGTTCTCTGCACCTAAGCATCTGTGT...AAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCGTCTTCTGCAATATCTaGATTCTCTGTGCAAACAAC	+
Preference number: 2 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSVFCNI*ILCANN Trigger: GTTGTTTGCACAGAGAATGCAGATATTGCAGAAGAC...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCTTCCCAGCATCTTTTaGGTTGATCCCACCAATCTG	+
Preference number: 2 (lower is better) Translates to: LVTRLSLTVLKSNRILIQLPSIF*VDPTNL Trigger: CAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAG...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	TATAATGAAGTAGGTGTAGGAAGGGTCAAATCCAGTTACAGGAATAAGAGAACCCGTCCGGTTCTTCATTaGTCAGAATCCATTTGCTGT	+
Preference number: 2 (lower is better) Translates to: YNEVGVGRVKSSYRNKRTRPVLH*SESICC Trigger: ACAGCAAATGGATTCTGATCAATGAAGAACCGGACG...GGTTCTCTTATTCCTGTAACTGGATTTGACCCTTCCTACACCTACTTCATTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGACAGTTACAAAATGCTaGTGGAGGTCATGGATATCG	+
Preference number: 2 (lower is better) Translates to: KSHSSKKQQNSHPADTDMTVTKC*WRSWIS Trigger: CGATATCCATGACCTCCATCAGCATTTTGTAACTGT...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	GTAGAAAAGAACTTCACGAAGAGGCAACAGCAAATCACAATCACATACAGCTTCCAGAAAAGTAGTCTTTaGGATATTTACGTCCGGTTC	+
Preference number: 2 (lower is better) Translates to: VEKNFTKRQQQITITYSFQKSSL*DIYVRF Trigger: GAACCGGACGTAAATATCTCAAAGACTACTTTTCTG...GAAGCTGTATGTGATTGTGATTTGCTGTTGCCTCTTCGTGAAGTTCTTTTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	TTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCTTACTGTTCTCCCAAGCAGAGAGAAAACTaGCAGAGGCCCCTAGTAACT	+
Preference number: 2 (lower is better) Translates to: FNKVLKSNVSASPSYCSPKQREN*QRPLVT Trigger: AGTTACTAGGGGCCTCTGTCAGTTTTCTCTCTGCTT...GGGAGAACAGTAAGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR-3UTR CCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCATTTGCTGTGTGTTTTaGTTTGTGTCCCAAGGGCTG	+
Preference number: 2 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIICCVF*FVSQGL Trigger: CAGCCCTTGGGACACAAACCAAAACACACAGCAAAT...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGGATGAAGGGTCTACATaGAAATTGTCCATAACTGAG	+
Preference number: 2 (lower is better) Translates to: LVTRLSLTVLKSNRILIQDEGST*KLSITE Trigger: CTCAGTTATGGACAATTTTCATGTAGACCCTTCATC...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR TCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGTATTATGCTCTGTTCTaGAGAAGTGATTCACATCCC	+
Preference number: 2 (lower is better) Translates to: LVTRLSLTVLKSNRILIQYYALF*RSDSHP Trigger: GGGATGTGAATCACTTCTTCAGAACAGAGCATAATA...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR GCA 90 bp	TATAATGAAGTAGGTGTAGGAAGGGTCAAATCCAGTTACAGGAATAAGAGAACCTCAAGGTCTTGCTTTTaGTTTACTCTAGAGACTAGA	+
Preference number: 2 (lower is better) Translates to: YNEVGVGRVKSSYRNKRTSRSCF*FTLETR Trigger: TCTAGTCTCTAGAGTAAAGCAAAAGCAAGACCTTGA...GGTTCTCTTATTCCTGTAACTGGATTTGACCCTTCCTACACCTACTTCATTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTACTGAGACCCTGGACTTaGTCCTCCCTACCCAATCCC	+
Preference number: 3 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLLRPWT*SSLPNP Trigger: GGGATTGGGTAGGGAGGACAAAGTCCAGGGTCTCAG...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	GATCAGACATGCTCCCTGCCCTTGGCGAGCTTACAGTCTAATCAGCTGGGAACTCATTTGCTGTGTGTTTaGGTTTGTGTCCCAAGGGCT	+
Preference number: 3 (lower is better) Translates to: DQTCSLPLASLQSNQLGTHLLCV*VCVPRA Trigger: AGCCCTTGGGACACAAACCAAAACACACAGCAAATG...AGTTCCCAGCTGATTAGACTGTAAGCTCGCCAAGGGCAGGGAGCATGTCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTAGGCTACAGGCCCTGTaGTTCTTGGGGGTAGAAAAG	+
Preference number: 3 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGRLQAL*FLGVEK Trigger: CTTTTCTACCCCCAAGAACAACAGGGCCTGTAGCCT...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAACGTCCGGTTCTTCATaGATCAGAATCCATTTGCTG	+
Preference number: 3 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLTSGSS*IRIHLL Trigger: CAGCAAATGGATTCTGATCAATGAAGAACCGGACGT...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	TTTAAACGTTCCCAGTCCTGTGATCATGCTGTGCTTATAGGCCACTCTGGACTGAGGCTACAGGCCCTGTaGTTCTTGGGGGTAGAAAAG	+
Preference number: 3 (lower is better) Translates to: FKRSQSCDHAVLIGHSGLRLQAL*FLGVEK Trigger: CTTTTCTACCCCCAAGAACAACAGGGCCTGTAGCCT...CAGTCCAGAGTGGCCTATAAGCACAGCATGATCACAGGACTGGGAACGTTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	CTAATCAGCTGGGAACTTGAAGGAAGGCTCAGTGAATaGAACTCAGGCATTGTCTCTCCTGCTCGGCATACC	+
Preference number: 3 (lower is better) Translates to: LISWELEGRLSE*NSGIVSPARHT Trigger: GGTATGCCGAGCAGGAGAGACAATGCCTGAGTTTCATTCACTGAGCCTTCCTTCAAGTTCCCAGCTGATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 72 bp	CTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTaGGATCCAGGACCTTGCTTAATTTCATCAAGTCCT	+
Preference number: 3 (lower is better) Translates to: LLGIPKNLWTCF*DPGPCLISSSP Trigger: AGGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCGGTGCAGAGAACACATaGCCTTTCTTTTCTAAACCA	+
Preference number: 3 (lower is better) Translates to: TQALSLLLGIPKNLWTCFGAENT*PFFSKP Trigger: TGGTTTAGAAAAGAAAGGCAATGTGTTCTCTGCACC...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTATTGACTTCAAGGTCTaGCTTTTGCTTTACTCTAGA	+
Preference number: 3 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPIDFKV*LLLYSR Trigger: TCTAGAGTAAAGCAAAAGCAAGACCTTGAAGTCAAT...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	CAGCAGACACTGACATGTGGAACCAAGCAGGCTGTTTaGATTTCTTTTCAGCATAGGTGGGAGGCAAAGGAG	+
Preference number: 3 (lower is better) Translates to: QQTLTCGTKQAV*ISFQHRWEAKE Trigger: CTCCTTTGCCTCCCACCTATGCTGAAAAGAAATTCAAACAGCCTGCTTGGTTCCACATGTCAGTGTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	ACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTaGAGAACTGTTCCCACTGGTCCTCTCCAGATTCAC	+
Preference number: 3 (lower is better) Translates to: TATLSQQHNLFI*RTVPTGPLQIH Trigger: GTGAATCTGGAGAGGACCAGTGGGAACAGTTCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTGACTTCAAGGTCTaGCTTTTGCTTTACTCTAGA	+
Preference number: 3 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLIDFKV*LLLYSR Trigger: TCTAGAGTAAAGCAAAAGCAAGACCTTGAAGTCAAT...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 72 bp	AGACTGAACGACTGCCTTCATACTGTCCATTTCAATTaGTGGTCCTCGCTCAAGGGTACTATTGTCCTCCTA	+
Preference number: 3 (lower is better) Translates to: RLNDCLHTVHFN*WSSLKGTIVLL Trigger: TAGGAGGACAATAGTACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGGCTGTGTGTTTTGGTTaGTGTCCCAAGGGCTGGCAG	+
Preference number: 3 (lower is better) Translates to: LVTRLSLTVLKSNRILIQAVCFG*CPKGWQ Trigger: CTGCCAGCCCTTGGGACACAAACCAAAACACACAGC...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	AGAGAGAGAGAATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTACGTCCGGTTCTTCATaGATCAGAATCCATTTGCTG	+
Preference number: 3 (lower is better) Translates to: RERESHRDIHRLCLRHCLTSGSS*IRIHLL Trigger: CAGCAAATGGATTCTGATCAATGAAGAACCGGACGT...AAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATTCTCTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	AATCCAGTTACAGGAATAAGAGAACCCAGGAATAAATaGACCCAAGACATGTGGTCTGGCCATCCTCGACCA	+
Preference number: 3 (lower is better) Translates to: NPVTGIREPRNK*TQDMWSGHPRP Trigger: TGGTCGAGGATGGCCAGACCACATGTCTTGGGTTCATTTATTCCTGGGTTCTCTTATTCCTGTAACTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	AGAGGAGTCTCCCAGAAGACAGTCATCATTCATTCATaGGAAGTTCTCCTGTTGCATCCCAGGTATGAGGAT	+
Preference number: 3 (lower is better) Translates to: RGVSQKTVIIHS*EVLLLHPRYED Trigger: ATCCTCATACCTGGGATGCAACAGGAGAACTTCTCATGAATGAATGATGACTGTCTTCTGGGAGACTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	CCCTACCCAATCCCATTTCTCTTGAGGTCACACAGATaGTTAGGTGCAGAGAACACATTGCCTTTCTTTTCT	+
Preference number: 3 (lower is better) Translates to: PYPIPFLLRSHR*LGAENTLPFFS Trigger: AGAAAAGAAAGGCAATGTGTTCTCTGCACCTAAGCATCTGTGTGACCTCAAGAGAAATGGGATTGGGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	TTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCTTACTGTTCTCCCCTGAGACCCTGGACTTaGTCCTCCCTACCCAATCCC	+
Preference number: 3 (lower is better) Translates to: FNKVLKSNVSASPSYCSPLRPWT*SSLPNP Trigger: GGGATTGGGTAGGGAGGACAAAGTCCAGGGTCTCAG...GGGAGAACAGTAAGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 72 bp	GGGAAGCACACCACTACACCCCAAATTGGCATAGCTTaGTTACCTGGAATTCTCAAAGTCATGAATAGCACA	+
Preference number: 3 (lower is better) Translates to: GKHTTTPQIGIA*LPGILKVMNST Trigger: TGTGCTATTCATGACTTTGAGAATTCCAGGTAATCAAGCTATGCCAATTTGGGGTGTAGTGGTGTGCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	GTGTCTATAGATCTCTCTATTCTGAGACTGAACGACTaGCTTCATACTGTCCATTTCAATTGGTGGTCCTCG	+
Preference number: 3 (lower is better) Translates to: VSIDLSILRLND*LHTVHFNWWSS Trigger: CGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAGAATAGAGAGATCTATAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	GAGACATCCATAGACTCTGCCTTAGGCACTGTCTTCTaGAATATCTGCATTCTCTGTGCAAACAACTTCTCT	+
Preference number: 3 (lower is better) Translates to: ETSIDSALGTVF*NICILCANNFS Trigger: AGAGAAGTTGTTTGCACAGAGAATGCAGATATTGCAGAAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	AAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTaGTTAATTTCATCAAGTCCTATAGGAGTCTCAGAT	+
Preference number: 3 (lower is better) Translates to: KNLWTCFWDPGP*LISSSPIGVSD Trigger: ATCTGAGACTCCTATAGGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	CTGAGGGTAACTCACCTGTTAACACTAAGTTTGCCATaGTGGTGTTTCCTTCTCTTAGTCAGTATTCCTCTG	+
Preference number: 3 (lower is better) Translates to: LRVTHLLTLSLP*WCFLLLVSIPL Trigger: CAGAGGAATACTGACTAAGAGAAGGAAACACCAGCATGGCAAACTTAGTGTTAACAGGTGAGTTACCCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR CCA 72 bp	AAACTGTGGTGGGAAGCACACCACTACACCCCAAATTaGCATAGCTTGATTACCTGGAATTCTCAAAGTCAT	+
Preference number: 3 (lower is better) Translates to: KLWWEAHHYTPN*HSLITWNSQSH Trigger: ATGACTTTGAGAATTCCAGGTAATCAAGCTATGCCAATTTGGGGTGTAGTGGTGTGCTTCCCACCACAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 72 bp	AGGGTAACTCACCTGTTAACACTAAGTTTGCCATGCTaGTGTTTCCTTCTCTTAGTCAGTATTCCTCTGCAG	+
Preference number: 3 (lower is better) Translates to: RVTHLLTLSLPC*CFLLLVSIPLQ Trigger: CTGCAGAGGAATACTGACTAAGAGAAGGAAACACCAGCATGGCAAACTTAGTGTTAACAGGTGAGTTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR-3UTR CAA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGCTGTGTGTTTTGGTTaGTGTCCCAAGGGCTGGCAG	+
Preference number: 3 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHAVCFG*CPKGWQ Trigger: CTGCCAGCCCTTGGGACACAAACCAAAACACACAGC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGATTGATCAGAATCCATTaGCTGTGTGTTTTGGTTTGT	+
Preference number: 3 (lower is better) Translates to: GCQETATLSQQHNLFICRLIRIH*LCVLVC Trigger: ACAAACCAAAACACACAGCAAATGGATTCTGATCAA...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	ATAGACTCTGCCTTAGGCACTGTCTTCTGCAATATCTaGATTCTCTGTGCAAACAACTTCTCTTGCACTTTC	+
Preference number: 3 (lower is better) Translates to: IDSALGTVFCNI*ILCANNFSCTF Trigger: GAAAGTGCAAGAGAAGTTGTTTGCACAGAGAATGCAGATATTGCAGAAGACAGTGCCTAAGGCAGAGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 72 bp	AAGCAACAGAATTCTCATCCAGCAGACACTGACATGTaGAACCAAGCAGGCTGTTTGAATTTCTTTTCAGCA	+
Preference number: 3 (lower is better) Translates to: KQQNSHPADTDM*NQAGCLNFFSA Trigger: TGCTGAAAAGAAATTCAAACAGCCTGCTTGGTTCCACATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	AGAGAGAGAGAATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTTTGATCAGAATCCATTaGCTGTGTGTTTTGGTTTGT	+
Preference number: 3 (lower is better) Translates to: RERESHRDIHRLCLRHCLLIRIH*LCVLVC Trigger: ACAAACCAAAACACACAGCAAATGGATTCTGATCAA...AAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATTCTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CCA 72 bp	TATAGTCTATTCTCTCACATATACTCCTCACATATATaGTGTTTCACTATGCACAAGGCACCCAGTAGGTGC	+
Preference number: 3 (lower is better) Translates to: YSLFSHIYSSHI*CFTMHKAPSRC Trigger: GCACCTACTGGGTGCCTTGTGCATAGTGAAACACCATATATGTGAGGAGTATATGTGAGAGAATAGACTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR-3UTR CAA 90 bp	TATAATGAAGTAGGTGTAGGAAGGGTCAAATCCAGTTACAGGAATAAGAGAACCGGTGCAGAGAACACATaGCCTTTCTTTTCTAAACCA	+
Preference number: 3 (lower is better) Translates to: YNEVGVGRVKSSYRNKRTGAENT*PFFSKP Trigger: TGGTTTAGAAAAGAAAGGCAATGTGTTCTCTGCACC...GGTTCTCTTATTCCTGTAACTGGATTTGACCCTTCCTACACCTACTTCATTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR-3UTR CAA 90 bp	TTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCTTACTGTTCTCCCAATGAAACTCAGGCATaGTCTCTCCTGCTCGGCATA	+
Preference number: 3 (lower is better) Translates to: FNKVLKSNVSASPSYCSPNETQA*SLLLGI Trigger: TATGCCGAGCAGGAGAGACAATGCCTGAGTTTCATT...GGGAGAACAGTAAGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR GCA 72 bp	CTCACATATACTCCTCACATATATGGTGTTTCACTATaGACAAGGCACCCAGTAGGTGCTTTAATAAAGTAC	+
Preference number: 3 (lower is better) Translates to: LTYTPHIYGVSL*TRHPVGALIKY Trigger: GTACTTTATTAAAGCACCTACTGGGTGCCTTGTGCATAGTGAAACACCATATATGTGAGGAGTATATGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 72 bp	CTAGAAACACTTCAGATTGTCACAGTTACAAAATGCTaGTGGAGGTCATGGATATCGCCACACATTTTACAA	+
Preference number: 3 (lower is better) Translates to: LETLQIVTVTKC*WRSWISPHILQ Trigger: TTGTAAAATGTGTGGCGATATCCATGACCTCCATCAGCATTTTGTAACTGTGACAATCTGAAGTGTTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	TCTCATCCTGGAAGGTTTAGTTATTATGCTCTGTTCTaGAGAAGTGATTCACATCCCAGTTATGAATATGAC	+
Preference number: 3 (lower is better) Translates to: SHPGRFSYYALF*RSDSHPSYEYD Trigger: GTCATATTCATAACTGGGATGTGAATCACTTCTTCAGAACAGAGCATAATAACTAAACCTTCCAGGATGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR GCA 72 bp	ATATGGTGTTTCACTATGCACAAGGCACCCAGTAGGTaGTTTAATAAAGTACTGAAAAGTAATGTAAGTGCT	+
Preference number: 3 (lower is better) Translates to: IWCFTMHKAPSR*FNKVLKSNVSA Trigger: AGCACTTACATTACTTTTCAGTACTTTATTAAAGCACCTACTGGGTGCCTTGTGCATAGTGAAACACCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 72 bp	TTGCATTTATTTGACTTTGGTTTTCATGTGAAGCTCTaGAAAGAATCTCCTCCATTTATTCTCATCCTGCTG	+
Preference number: 3 (lower is better) Translates to: LHLFDFGFHVKL*KESPPFILILL Trigger: CAGCAGGATGAGAATAAATGGAGGAGATTCTTTTCAGAGCTTCACATGAAAACCAAAGTCAAATAAATGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	TTGCTTAATTTCATCAAGTCCTATAGGAGTCTCAGATaGTCTGAGTCTTGTGAAGTATTAATGGTCCATTAC	+
Preference number: 3 (lower is better) Translates to: LLNFIKSYRSLR*SESCEVLMVHY Trigger: GTAATGGACCATTAATACTTCACAAGACTCAGATCATCTGAGACTCCTATAGGACTTGATGAAATTAAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR TCA 72 bp	GCAAGAAGAGTGAGATTTATACAGATAGCTACAGAATaGTTAATCCAAATTCAGCTGAACTCTGAAGTCTAC	+
Preference number: 3 (lower is better) Translates to: ARRVRFIQIATE*LIQIQLNSEVY Trigger: GTAGACTTCAGAGTTCAGCTGAATTTGGATTAATCATTCTGTAGCTATCTGTATAAATCTCACTCTTCTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
3UTR TCA 72 bp	AGCTACAGAATGATTAATCCAAATTCAGCTGAACTCTaGAGTCTACATGTTTCAAAAGTTTGTGAGATACAG	+
Preference number: 3 (lower is better) Translates to: SYRMINPNSAEL*SLHVSKVCEIQ Trigger: CTGTATCTCACAAACTTTTGAAACATGTAGACTTCAGAGTTCAGCTGAATTTGGATTAATCATTCTGTAGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR CCA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTCAGCTAGCGTCTAGCTaGTTGGTGTCCAGGAGGTGC	+
Preference number: 4 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPQLASS*LVSRRC Trigger: GCACCTCCTGGACACCAACCAGCTAGACGCTAGCTG...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCGTGTCCAGGAGGTGCTaGAGCCATTCCCACACCTGG	+
Preference number: 4 (lower is better) Translates to: TQALSLLLGIPKNLWTCFVSRRC*SHSHTW Trigger: CCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACAC...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTTGGTGTCCAGGAGGTaGTGCAGCCATTCCCACACC	+
Preference number: 4 (lower is better) Translates to: TQALSLLLGIPKNLWTCFLVSRR*CSHSHT Trigger: GGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAA...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	GATCAGACATGCTCCCTGCCCTTGGCGAGCTTACAGTCTAATCAGCTGGGAACTTTGGTGTCCAGGAGGTaGTGCAGCCATTCCCACACC	+
Preference number: 4 (lower is better) Translates to: DQTCSLPLASLQSNQLGTLVSRR*CSHSHT Trigger: GGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAA...AGTTCCCAGCTGATTAGACTGTAAGCTCGCCAAGGGCAGGGAGCATGTCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTACTCCTGCAGACTCATaGTGCACAGGTGTTCTCCGC	+
Preference number: 4 (lower is better) Translates to: LRHCLSCSAYRRTCGPVSTPADS*CTGVLR Trigger: GCGGAGAACACCTGTGCAGCATGAGTCTGCAGGAGT...AGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTTTTTCCCCCACAGCTaGGCCACAGCTTCTGACTTC	+
Preference number: 4 (lower is better) Translates to: TQALSLLLGIPKNLWTCFFFPHS*ATASDF Trigger: GAAGTCAGAAGCTGTGGCTCAGCTGTGGGGGAAAAA...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATGAACTCCCATAAGTaGGTGCCTCTTGGGTTGTGC	+
Preference number: 4 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLMNSHK*VPLGLC Trigger: GCACAACCCAAGAGGCACTCACTTATGGGAGTTCAT...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTACTGAGCCACAGCTTCTaGCTTCAGGAACCTGAAGAT	+
Preference number: 4 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLLSHSF*LQEPED Trigger: ATCTTCAGGTTCCTGAAGTCAGAAGCTGTGGCTCAG...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	TTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCCTGCCCTTGTTTTTCCCCCACAGCTaGGCCACAGCTTCTGACTTC	+
Preference number: 4 (lower is better) Translates to: LHPRYEDNRGDQTCSLPLFFPHS*ATASDF Trigger: GAAGTCAGAAGCTGTGGCTCAGCTGTGGGGGAAAAA...CAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AGGGAAGGAGAAGCAGAGAGAAAACTGACAGAGGCCCCTAGTAACTTCACAAACGCCCTCGTGAACTCCTaGAGACTCATGCTGCACAGG	+
Preference number: 4 (lower is better) Translates to: REGEAERKLTEAPSNFTNALVNS*RLMLHR Trigger: CCTGTGCAGCATGAGTCTGCAGGAGTTCACGAGGGC...GTTTGTGAAGTTACTAGGGGCCTCTGTCAGTTTTCTCTCTGCTTCTCCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGACAGCTAGCGTCTAGCTaGTTGGTGTCCAGGAGGTGC	+
Preference number: 4 (lower is better) Translates to: GCQETATLSQQHNLFICRQLASS*LVSRRC Trigger: GCACCTCCTGGACACCAACCAGCTAGACGCTAGCTG...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTTATTTGGTCCAGTACTaGGGGTGGATTTCATGCCAC	+
Preference number: 4 (lower is better) Translates to: LRHCLSCSAYRRTCGPVSYLVQY*GWISCH Trigger: GTGGCATGAAATCCACCCTCAGTACTGGACCAAATA...AGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAAGAGAATGTCTCGGATaGACTCCCATAAGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLRECLG*TPISEC Trigger: GCACTCACTTATGGGAGTTCATCCGAGACATTCTCT...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCAGAGAATGTCTCGGATaGACTCCCATAAGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: TQALSLLLGIPKNLWTCFRECLG*TPISEC Trigger: GCACTCACTTATGGGAGTTCATCCGAGACATTCTCT...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTAACCGCTGGAAACATTaGATGTGGGGTAGCTGTCCG	+
Preference number: 4 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGNRWKH*MWGSCP Trigger: CGGACAGCTACCCCACATGCAATGTTTCCAGCGGTT...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCACTCCTGCAGACTCATaGTGCACAGGTGTTCTCCGC	+
Preference number: 4 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSTPADS*CTGVLR Trigger: GCGGAGAACACCTGTGCAGCATGAGTCTGCAGGAGT...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTTGGAAACATTGCATGTaGGGTAGCTGTCCGTCCAGG	+
Preference number: 4 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGWKHCM*GSCPSR Trigger: CCTGGACGGACAGCTACCCCACATGCAATGTTTCCA...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTGTTGTCATGGAGATCTaGGCCCGGCAGAAAGTCTTA	+
Preference number: 4 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGVVMEI*ARQKVL Trigger: TAAGACTTTCTGCCGGGCTCAGATCTCCATGACAAC...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR TCA 90 bp	GATCAGACATGCTCCCTGCCCTTGGCGAGCTTACAGTCTAATCAGCTGGGAACTCTTTTTCATATCAGGTaGCTCTGCTACTGTGCTACC	+
Preference number: 4 (lower is better) Translates to: DQTCSLPLASLQSNQLGTLFHIR*LCYCAT Trigger: GGTAGCACAGTAGCAGAGTCACCTGATATGAAAAAG...AGTTCCCAGCTGATTAGACTGTAAGCTCGCCAAGGGCAGGGAGCATGTCTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGAAACCGCTGGAAACATTaGATGTGGGGTAGCTGTCCG	+
Preference number: 4 (lower is better) Translates to: GCQETATLSQQHNLFICRNRWKH*MWGSCP Trigger: CGGACAGCTACCCCACATGCAATGTTTCCAGCGGTT...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCACTCCCATAAGTGAGTaGCTCTTGGGTTGTGCTTTT	+
Preference number: 4 (lower is better) Translates to: TQALSLLLGIPKNLWTCFTPISE*LLGCAF Trigger: AAAAGCACAACCCAAGAGGCACTCACTTATGGGAGT...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTAAGGAGGTTGTTGGCTaGGTTGAGATTCATTACACC	+
Preference number: 4 (lower is better) Translates to: LRHCLSCSAYRRTCGPVSKEVVG*VEIHYT Trigger: GGTGTAATGAATCTCAACCCAGCCAACAACCTCCTT...AGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCTGGAAACATTGCATGTaGGGTAGCTGTCCGTCCAGG	+
Preference number: 4 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSWKHCM*GSCPSR Trigger: CCTGGACGGACAGCTACCCCACATGCAATGTTTCCA...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AGAGAGAGAGAATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTGACTGGAGGTTGTCATaGAGATCTGAGCCCGGCAGA	+
Preference number: 4 (lower is better) Translates to: RERESHRDIHRLCLRHCLDWRLS*RSEPGR Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTC...AAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATTCTCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR CCA 90 bp	TTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCCTGCCCTTGCCATTTGATCAGTCCTaGGTTCTTGTCTGGGCTCAA	+
Preference number: 4 (lower is better) Translates to: LHPRYEDNRGDQTCSLPLPFDQS*VLVWAQ Trigger: TTGAGCCCAGACAAGAACCCAGGACTGATCAAATGG...CAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 72 bp	TTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTaGTCCTCCCTACCCAATCCCATTTCTCTTGAGGTC	+
Preference number: 4 (lower is better) Translates to: FWVDPTNLRPWT*SSLPNPISLEV Trigger: GACCTCAAGAGAAATGGGATTGGGTAGGGAGGACAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	ACTTTGTCCTCCCTACCCAATCCCATTTCTCTTGAGGTCACACAGATGCTTAGGCTGAGCCACAGCTTCTaGCTTCAGGAACCTGAAGAT	+
Preference number: 4 (lower is better) Translates to: TLSSLPNPISLEVTQMLRLSHSF*LQEPED Trigger: ATCTTCAGGTTCCTGAAGTCAGAAGCTGTGGCTCAG...CCTAAGCATCTGTGTGACCTCAAGAGAAATGGGATTGGGTAGGGAGGACAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	TTGCATCCCAGGTATGAGGATAACAGAGGTGATCAGACATGCTCCCTGCCCTTGGACAATGACATTGTGTaGGGACTGGAAAAGGTCACT	+
Preference number: 4 (lower is better) Translates to: LHPRYEDNRGDQTCSLPLDNDIV*GLEKVT Trigger: AGTGACCTTTTCCAGTCCGCACACAATGTCATTGTC...CAAGGGCAGGGAGCATGTCTGATCACCTCTGTTATCCTCATACCTGGGATGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 72 bp	TTCCTCTTAGCAAGAAGCACAAGGCTACAGGCCCTGTaGTTCTTGGGGGTAGAAAAGAACTTCACGAAGAGG	+
Preference number: 4 (lower is better) Translates to: FLLARSTRLQAL*FLGVEKNFTKR Trigger: CCTCTTCGTGAAGTTCTTTTCTACCCCCAAGAACAACAGGGCCTGTAGCCTTGTGCTTCTTGCTAAGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 72 bp	GAGACTGAACGACTGCCTTCATACTGTCCATTTCAATaGGTGGTCCTCGCTCAAGGGTACTATTGTCCTCCT	+
Preference number: 4 (lower is better) Translates to: ETERLPSYCPFQ*VVLAQGYYCPP Trigger: AGGAGGACAATAGTACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	GGGTGCCAAGAAACTGCCACTCTCAGCCAACAGCATAATCTGTTTATCTGCAGATATTTGGTCCAGTACTaGGGGTGGATTTCATGCCAC	+
Preference number: 4 (lower is better) Translates to: GCQETATLSQQHNLFICRYLVQY*GWISCH Trigger: GTGGCATGAAATCCACCCTCAGTACTGGACCAAATA...TCTGCAGATAAACAGATTATGCTGTTGGCTGAGAGTGGCAGTTTCTTGGCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	ACTTTGTCCTCCCTACCCAATCCCATTTCTCTTGAGGTCACACAGATGCTTAGGAACGGTCTTCCCATTTaGTCAGTCCTGGGTTCTTGT	+
Preference number: 4 (lower is better) Translates to: TLSSLPNPISLEVTQMLRNGLPI*SVLGSC Trigger: ACAAGAACCCAGGACTGATCAAATGGGAAGACCGTT...CCTAAGCATCTGTGTGACCTCAAGAGAAATGGGATTGGGTAGGGAGGACAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CATGCTCATCGATCATTTCCAGGCCACTATTTTCCTGTCCCACTTAATTTTCAAGCCCTCGTGAACTCCTaGAGACTCATGCTGCACAGG	+
Preference number: 4 (lower is better) Translates to: HAHRSFPGHYFPVPLNFQALVNS*RLMLHR Trigger: CCTGTGCAGCATGAGTCTGCAGGAGTTCACGAGGGC...TTGAAAATTAAGTGGGACAGGAAAATAGTGGCCTGGAAATGATCGATGAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTATTTACAGGGTGGTCTTaGTCCTTTTTCATATCAGGT	+
Preference number: 4 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLFTGWS*SFFISG Trigger: ACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAA...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTACTGTGCTACCATAGCTaGGATCATAGAGATAGTTTT	+
Preference number: 4 (lower is better) Translates to: LGIPKNLWTCFWDPGPCLLCYHS*DHRDSF Trigger: AAAACTATCTCTATGATCCCAGCTATGGTAGCACAG...TAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGTGTCCAGGAGGTGCTaGAGCCATTCCCACACCTGG	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIVSRRC*SHSHTW Trigger: CCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACAC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGTTGGTGTCCAGGAGGTaGTGCAGCCATTCCCACACC	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLLVSRR*CSHSHT Trigger: GGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAA...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AAACTTCCCAGCATCTTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTTGGACAATGACATTGTGTaGGGACTGGAAAAGGTCACT	+
Preference number: 4 (lower is better) Translates to: KLPSIFWVDPTNLRPWTLDNDIV*GLEKVT Trigger: AGTGACCTTTTCCAGTCCGCACACAATGTCATTGTC...CAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	TTTAAACGTTCCCAGTCCTGTGATCATGCTGTGCTTATAGGCCACTCTGGACTGACTCCCATAAGTGAGTaGCTCTTGGGTTGTGCTTTT	+
Preference number: 4 (lower is better) Translates to: FKRSQSCDHAVLIGHSGLTPISE*LLGCAF Trigger: AAAAGCACAACCCAAGAGGCACTCACTTATGGGAGT...CAGTCCAGAGTGGCCTATAAGCACAGCATGATCACAGGACTGGGAACGTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AAACTTCCCAGCATCTTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTTGTTGTGCTTTTTGGTGTaGGACTTTACAGGGTGGTCT	+
Preference number: 4 (lower is better) Translates to: KLPSIFWVDPTNLRPWTLLCFLV*DFTGWS Trigger: AGACCACCCTGTAAAGTCCCACACCAAAAAGCACAA...CAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AAACTTCCCAGCATCTTTTGGGTTGATCCCACCAATCTGAGACCCTGGACTTTGTTGGGTTGTGCTTTTTaGTGTGGGACTTTACAGGGT	+
Preference number: 4 (lower is better) Translates to: KLPSIFWVDPTNLRPWTLLGCAF*CGTLQG Trigger: ACCCTGTAAAGTCCCACACCAAAAAGCACAACCCAA...CAAAGTCCAGGGTCTCAGATTGGTGGGATCAACCCAAAAGATGCTGGGAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	TTTAAACGTTCCCAGTCCTGTGATCATGCTGTGCTTATAGGCCACTCTGGACTGTTGGGTTGTGCTTTTTaGTGTGGGACTTTACAGGGT	+
Preference number: 4 (lower is better) Translates to: FKRSQSCDHAVLIGHSGLLGCAF*CGTLQG Trigger: ACCCTGTAAAGTCCCACACCAAAAAGCACAACCCAA...CAGTCCAGAGTGGCCTATAAGCACAGCATGATCACAGGACTGGGAACGTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGCTGACTTCAGGAACCTaGAGATGCCTTCCGAACGGT	+
Preference number: 4 (lower is better) Translates to: KSHSSKKQQNSHPADTDMLTSGT*RCLPNG Trigger: ACCGTTCGGAAGGCATCTTCAGGTTCCTGAAGTCAG...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGCCCTCGTGAACTCCTaGAGACTCATGCTGCACAGG	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIALVNS*RLMLHR Trigger: CCTGTGCAGCATGAGTCTGCAGGAGTTCACGAGGGC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCAGCTAGCGTCTAGCTaGTTGGTGTCCAGGAGGTGC	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIQLASS*LVSRRC Trigger: GCACCTCCTGGACACCAACCAGCTAGACGCTAGCTG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTCTGTGCTACCATAGCTaGGATCATAGAGATAGTTTT	+
Preference number: 4 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGLCYHS*DHRDSF Trigger: AAAACTATCTCTATGATCCCAGCTATGGTAGCACAG...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
3UTR CAA 72 bp	GAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTaGCTTAATTTCATCAAGTCCTATAGGAGTCTCAGA	+
Preference number: 4 (lower is better) Translates to: EEPVDLFLGSRT*LNFIKSYRSLR Trigger: TCTGAGACTCCTATAGGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGATTGGCCGTTCCACTTaGGATGCTGTAGGTTGCTGT	+
Preference number: 4 (lower is better) Translates to: KSHSSKKQQNSHPADTDMIGRST*DAVGCC Trigger: ACAGCAACCTACAGCATCTCAAGTGGAACGGCCAAT...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGATGAACTCCCATAAGTaGGTGCCTCTTGGGTTGTGC	+
Preference number: 4 (lower is better) Translates to: KSHSSKKQQNSHPADTDMMNSHK*VPLGLC Trigger: GCACAACCCAAGAGGCACTCACTTATGGGAGTTCAT...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	TATAATGAAGTAGGTGTAGGAAGGGTCAAATCCAGTTACAGGAATAAGAGAACCCTGACTTCAGGAACCTaGAGATGCCTTCCGAACGGT	+
Preference number: 4 (lower is better) Translates to: YNEVGVGRVKSSYRNKRTLTSGT*RCLPNG Trigger: ACCGTTCGGAAGGCATCTTCAGGTTCCTGAAGTCAG...GGTTCTCTTATTCCTGTAACTGGATTTGACCCTTCCTACACCTACTTCATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGAACCGCTGGAAACATTaGATGTGGGGTAGCTGTCCG	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLNRWKH*MWGSCP Trigger: CGGACAGCTACCCCACATGCAATGTTTCCAGCGGTT...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCACTCCTGCAGACTCATaGTGCACAGGTGTTCTCCGC	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRITPADS*CTGVLR Trigger: GCGGAGAACACCTGTGCAGCATGAGTCTGCAGGAGT...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	TTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCTTACTGTTCTCCCGCTGTCCGTCCAGGCTaGTTGCTGGTGAAGGAGGTT	+
Preference number: 4 (lower is better) Translates to: FNKVLKSNVSASPSYCSPAVRPG*LLVKEV Trigger: AACCTCCTTCACCAGCAACCAGCCTGGACGGACAGC...GGGAGAACAGTAAGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR CCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGCTGTCCGTCCAGGCTaGTTGCTGGTGAAGGAGGTT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHAVRPG*LLVKEV Trigger: AACCTCCTTCACCAGCAACCAGCCTGGACGGACAGC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGTGGAAACATTGCATGTaGGGTAGCTGTCCGTCCAGG	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLWKHCM*GSCPSR Trigger: CCTGGACGGACAGCTACCCCACATGCAATGTTTCCA...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
3UTR CAA 72 bp	ATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTaGCTGTGTGTTTTGGTTTGTGTCCCAAGGGCTGGC	+
Preference number: 4 (lower is better) Translates to: IFTSGSSLIRIH*LCVLVCVPRAG Trigger: GCCAGCCCTTGGGACACAAACCAAAACACACAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGATTGGCCGTTCCACTTaGGATGCTGTAGGTTGCTGT	+
Preference number: 4 (lower is better) Translates to: LVTRLSLTVLKSNRILIQIGRST*DAVGCC Trigger: ACAGCAACCTACAGCATCTCAAGTGGAACGGCCAAT...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCTGACTTCAGGAACCTaGAGATGCCTTCCGAACGGT	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILTSGT*RCLPNG Trigger: ACCGTTCGGAAGGCATCTTCAGGTTCCTGAAGTCAG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCAGACACTGACATGGTGCCTCTTGGGTTGTaGTTTTTGGTGTGGGACTTT	+
Preference number: 4 (lower is better) Translates to: KSHSSKKQQNSHPADTDMVPLGL*FLVWDF Trigger: AAAGTCCCACACCAAAAAGCACAACCCAAGAGGCAC...CATGTCAGTGTCTGCTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGACTGGAGGTTGTCATaGAGATCTGAGCCCGGCAGA	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHDWRLS*RSEPGR Trigger: TCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR CCA 90 bp	CATGCTCATCGATCATTTCCAGGCCACTATTTTCCTGTCCCACTTAATTTTCAACCATTTGATCAGTCCTaGGTTCTTGTCTGGGCTCAA	+
Preference number: 4 (lower is better) Translates to: HAHRSFPGHYFPVPLNFQPFDQS*VLVWAQ Trigger: TTGAGCCCAGACAAGAACCCAGGACTGATCAAATGG...TTGAAAATTAAGTGGGACAGGAAAATAGTGGCCTGGAAATGATCGATGAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGGGTTGTTGGCTGGGTTaGGATTCATTACACCACTTC	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLGCWLG*DSLHHF Trigger: GAAGTGGTGTAATGAATCTCAACCCAGCCAACAACC...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGTTGTCATGGAGATCTaGGCCCGGCAGAAAGTCTTA	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIVVMEI*ARQKVL Trigger: TAAGACTTTCTGCCGGGCTCAGATCTCCATGACAAC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR TCA 90 bp	TTTAATAAAGTACTGAAAAGTAATGTAAGTGCTTCCCCTTCTTACTGTTCTCCCTCTGCAACTGGAAGGTaGCTGGAGGTTGTCATGGAG	+
Preference number: 4 (lower is better) Translates to: FNKVLKSNVSASPSYCSPSATGR*LEVVME Trigger: CTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGA...GGGAGAACAGTAAGAAGGGGAAGCACTTACATTACTTTTCAGTACTTTATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR TCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTCTGCAACTGGAAGGTaGCTGGAGGTTGTCATGGAG	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHSATGR*LEVVME Trigger: CTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGA...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR TCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGAGAGAATGTCTCGGATaGACTCCCATAAGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLRECLG*TPISEC Trigger: GCACTCACTTATGGGAGTTCATCCGAGACATTCTCT...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGAACGGTCTTCCCATTTaGTCAGTCCTGGGTTCTTGT	+
Preference number: 4 (lower is better) Translates to: LVTRLSLTVLKSNRILIQNGLPI*SVLGSC Trigger: ACAAGAACCCAGGACTGATCAAATGGGAAGACCGTT...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTTTTCCCCCACAGCTaGGCCACAGCTTCTGACTTC	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHFFPHS*ATASDF Trigger: GAAGTCAGAAGCTGTGGCTCAGCTGTGGGGGAAAAA...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGCAACTGGAAGGTGACTaGAGGTTGTCATGGAGATCT	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLQLEGD*RLSWRS Trigger: AGATCTCCATGACAACCTCCAGTCACCTTCCAGTTG...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGGTTGTTGGCTGGGTTaGGATTCATTACACCACTTC	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIGCWLG*DSLHHF Trigger: GAAGTGGTGTAATGAATCTCAACCCAGCCAACAACC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCTATTTGGTCCAGTACTaGGGGTGGATTTCATGCCAC	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIYLVQY*GWISCH Trigger: GTGGCATGAAATCCACCCTCAGTACTGGACCAAATA...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATATTGGCCGTTCCACTTaGGATGCTGTAGGTTGCTGT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHIGRST*DAVGCC Trigger: ACAGCAACCTACAGCATCTCAAGTGGAACGGCCAAT...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGCTTTTTCATATCAGGTaGCTCTGCAACTGGAAGGTG	+
Preference number: 4 (lower is better) Translates to: LVTRLSLTVLKSNRILIQLFHIR*LCNWKV Trigger: CACCTTCCAGTTGCAGAGTCACCTGATATGAAAAAG...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR TCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATATGAACTCCCATAAGTaGGTGCCTCTTGGGTTGTGC	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHMNSHK*VPLGLC Trigger: GCACAACCCAAGAGGCACTCACTTATGGGAGTTCAT...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCAACGGTCTTCCCATTTaGTCAGTCCTGGGTTCTTGT	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRINGLPI*SVLGSC Trigger: ACAAGAACCCAGGACTGATCAAATGGGAAGACCGTT...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATCTGAGCCACAGCTTCTaGCTTCAGGAACCTGAAGAT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHLSHSF*LQEPED Trigger: ATCTTCAGGTTCCTGAAGTCAGAAGCTGTGGCTCAG...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGTGCCTCTTGGGTTGTaGTTTTTGGTGTGGGACTTT	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIVPLGL*FLVWDF Trigger: AAAGTCCCACACCAAAAAGCACAACCCAAGAGGCAC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	ATAGATCTCTCTATTCTGAGACTGAACGACTGCCTTCATACTGTCCATTTCAATAAGGAGGTTGTTGGCTaGGTTGAGATTCATTACACC	+
Preference number: 4 (lower is better) Translates to: IDLSILRLNDCLHTVHFNKEVVG*VEIHYT Trigger: GGTGTAATGAATCTCAACCCAGCCAACAACCTCCTT...ATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAGAATAGAGAGATCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGAAGGAGGTTGTTGGCTaGGTTGAGATTCATTACACC	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLKEVVG*VEIHYT Trigger: GGTGTAATGAATCTCAACCCAGCCAACAACCTCCTT...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGTTGTGCTTTTTGGTGTaGGACTTTACAGGGTGGTCT	+
Preference number: 4 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLLCFLV*DFTGWS Trigger: AGACCACCCTGTAAAGTCCCACACCAAAAAGCACAA...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR TCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCTTTTTCATATCAGGTaGCTCTGCAACTGGAAGGTG	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILFHIR*LCNWKV Trigger: CACCTTCCAGTTGCAGAGTCACCTGATATGAAAAAG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR GCA 90 bp	TTGAACTACAGAGATACAAGAGCATGCTCATCGATCATTTCCAGGCCACTATTTTTTACAGGGTGGTCTTaGTCCTTTTTCATATCAGGT	+
Preference number: 4 (lower is better) Translates to: LNYRDTRACSSIISRPLFFTGWS*SFFISG Trigger: ACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAA...AAATAGTGGCCTGGAAATGATCGATGAGCATGCTCTTGTATCTCTGTAGTTCAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATCAACTGGAAGGTGACTaGAGGTTGTCATGGAGATCT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHQLEGD*RLSWRS Trigger: AGATCTCCATGACAACCTCCAGTCACCTTCCAGTTG...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS-3UTR CCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCTTGGGTTGTGCTTTTTaGTGTGGGACTTTACAGGGT	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILGCAF*CGTLQG Trigger: ACCCTGTAAAGTCCCACACCAAAAAGCACAACCCAA...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATCCATTTGATCAGTCCTaGGTTCTTGTCTGGGCTCAA	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHPFDQS*VLVWAQ Trigger: TTGAGCCCAGACAAGAACCCAGGACTGATCAAATGG...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGACAATGACATTGTGTaGGGACTGGAAAAGGTCACT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHDNDIV*GLEKVT Trigger: AGTGACCTTTTCCAGTCCGCACACAATGTCATTGTC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATACTCCCATAAGTGAGTaGCTCTTGGGTTGTGCTTTT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHTPISE*LLGCAF Trigger: AAAAGCACAACCCAAGAGGCACTCACTTATGGGAGT...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGTGCTTTTTGGTGTaGGACTTTACAGGGTGGTCT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHLCFLV*DFTGWS Trigger: AGACCACCCTGTAAAGTCCCACACCAAAAAGCACAA...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CCA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCTGTGCTACCATAGCTaGGATCATAGAGATAGTTTT	+
Preference number: 4 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILCYHS*DHRDSF Trigger: AAAACTATCTCTATGATCCCAGCTATGGTAGCACAG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR GCA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTTACAGGGTGGTCTTaGTCCTTTTTCATATCAGGT	+
Preference number: 4 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHFTGWS*SFFISG Trigger: ACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAA...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS TCA 90 bp	TGTGTGCGGACTGGAAAAGGTCACTGCTGCATTGGCCGTTCCACTTaGGATGCTGTAGGTTGCTGTAGAGCAGCTGCCCAGCTGAGCCTG	+
Preference number: 5 (lower is better) Translates to: CVRTGKGHCCIGRST*DAVGCCRAAAQLSL Trigger: CAGGCTCAGCTGGGCAGCTGCTCTACAGCAACCTACAGCATCTCAAGTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 90 bp	CCGCTAATGTCGAACTCCTGGAAAGGGATGCAGCTAGCGTCTAGCTaGTTGGTGTCCAGGAGGTGCTGCAGCCATTCCCACACCTGGTAT	+
Preference number: 5 (lower is better) Translates to: PLMSNSWKGMQLASS*LVSRRCCSHSHTWY Trigger: ATACCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTTCGACATTAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 90 bp	TGCAGACTCATGCTGCACAGGTGTTCTCCGCTAATGTCGAACTCCTaGAAAGGGATGCAGCTAGCGTCTAGCTGGTTGGTGTCCAGGAGG	+
Preference number: 5 (lower is better) Translates to: CRLMLHRCSPLMSNS*KGMQLASSWLVSRR Trigger: CCTCCTGGACACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTTCGACATTAGCGGAGAACACCTGTGCAGCATGAGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 90 bp	AAAACCGCTGGAAACATTGCATGTGGGGTAGCTGTCCGTCCAGGCTaGTTGCTGGTGAAGGAGGTTGTTGGCTGGGTTGAGATTCATTAC	+
Preference number: 5 (lower is better) Translates to: KTAGNIACGVAVRPG*LLVKEVVGWVEIHY Trigger: GTAATGAATCTCAACCCAGCCAACAACCTCCTTCACCAGCAACCAGCCTGGACGGACAGCTACCCCACATGCAATGTTTCCAGCGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS-3UTR CAA 90 bp	CTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTGGGATCCAGGACCTGATGGAAGGATCGGTTaGTTCAGTCTTGACAATGAC	+
Preference number: 5 (lower is better) Translates to: LLLGIPKNLWTCFWDPGPDGRIG*FSLDND Trigger: GTCATTGTCAAGACTGAACAAACCGATCCTTCCATC...AGGTCCTGGATCCCAGAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCGAAGGTGACTGGAGGTaGTCATGGAGATCTGAGCCC	+
Preference number: 5 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSEGDWR*SWRSEP Trigger: GGGCTCAGATCTCCATGACAACCTCCAGTCACCTTC...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090475.10
CDS-3UTR CAA 90 bp	ACTCAGGCATTGTCTCTCCTGCTCGGCATACCGAAGAACCTGTGGACCTGTTTCTCGGTTTGTTCAGTCTaGACAATGACATTGTGTGCG	+
Preference number: 5 (lower is better) Translates to: TQALSLLLGIPKNLWTCFSVCSV*TMTLCA Trigger: CGCACACAATGTCATTGTCAAGACTGAACAAACCGA...GAAACAGGTCCACAGGTTCTTCGGTATGCCGAGCAGGAGAGACAATGCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS GCA 90 bp	CATGATGGAAGGATCGGTTTGTTCAGTCTTGACAATGACATTGTGTaGGGACTGGAAAAGGTCACTGCTGCATTGGCCGTTCCACTTGAG	+
Preference number: 5 (lower is better) Translates to: HDGRIGLFSLDNDIV*GLEKVTAALAVPLE Trigger: CTCAAGTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCTTCCATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS CCA 90 bp	GAAGGATCGGTTTGTTCAGTCTTGACAATGACATTGTGTGCGGACTaGAAAAGGTCACTGCTGCATTGGCCGTTCCACTTGAGATGCTGT	+
Preference number: 5 (lower is better) Translates to: EGSVCSVLTMTLCAD*KRSLLHWPFHLRCC Trigger: ACAGCATCTCAAGTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS CCA 90 bp	TCATATCAGGTGACTCTGCAACTGGAAGGTGACTGGAGGTTGTCATaGAGATCTGAGCCCGGCAGAAAGTCTTACTGTCCAACAGATCTA	+
Preference number: 5 (lower is better) Translates to: SYQVTLQLEGDWRLS*RSEPGRKSYCPTDL Trigger: TAGATCTGTTGGACAGTAAGACTTTCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGAGTCACCTGATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS-3UTR CAA 90 bp	CATGCTCATCGATCATTTCCAGGCCACTATTTTCCTGTCCCACTTAATTTTCAACTAGCGTCTAGCTGGTaGGTGTCCAGGAGGTGCTGC	+
Preference number: 5 (lower is better) Translates to: HAHRSFPGHYFPVPLNFQLASSW*VSRRCC Trigger: GCAGCACCTCCTGGACACCAACCAGCTAGACGCTAG...TTGAAAATTAAGTGGGACAGGAAAATAGTGGCCTGGAAATGATCGATGAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	ACTTTGTCCTCCCTACCCAATCCCATTTCTCTTGAGGTCACACAGATGCTTAGGCTTGGGTTGTGCTTTTaGGTGTGGGACTTTACAGGG	+
Preference number: 5 (lower is better) Translates to: TLSSLPNPISLEVTQMLRLGLCF*VWDFTG Trigger: CCCTGTAAAGTCCCACACCAAAAAGCACAACCCAAG...CCTAAGCATCTGTGTGACCTCAAGAGAAATGGGATTGGGTAGGGAGGACAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGCTAGCGTCTAGCTGGTaGGTGTCCAGGAGGTGCTGC	+
Preference number: 5 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLLASSW*VSRRCC Trigger: GCAGCACCTCCTGGACACCAACCAGCTAGACGCTAG...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTGATGGAAGGATCGGTTaGTTCAGTCTTGACAATGAC	+
Preference number: 5 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGDGRIG*FSLDND Trigger: GTCATTGTCAAGACTGAACAAACCGATCCTTCCATC...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CTGAACGACTGCCTTCATACTGTCCATTTCAATTGGTGGTCCTCGCTCAAGGGTATAAGTGAGTGCCTCTaGGGTTGTGCTTTTTGGTGT	+
Preference number: 5 (lower is better) Translates to: LNDCLHTVHFNWWSSLKGISECL*GCAFWC Trigger: ACACCAAAAAGCACAACCCAAGAGGCACTCACTTAT...ACCCTTGAGCGAGGACCACCAATTGAAATGGACAGTATGAAGGCAGTCGTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCAGGTTGTTGGCTGGGTaGAGATTCATTACACCACTT	+
Preference number: 5 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSRLLAG*RFITPL Trigger: AAGTGGTGTAATGAATCTCAACCCAGCCAACAACCT...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGGGAAGGAGAAGCAGAGAGAAAACTGACAGAGGCCCCTAGTAACTTCACAAACTCGGTTTGTTCAGTCTaGACAATGACATTGTGTGCG	+
Preference number: 5 (lower is better) Translates to: REGEAERKLTEAPSNFTNSVCSV*TMTLCA Trigger: CGCACACAATGTCATTGTCAAGACTGAACAAACCGA...GTTTGTGAAGTTACTAGGGGCCTCTGTCAGTTTTCTCTCTGCTTCTCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GAACCTGTGGACCTGTTTCTGGGATCCAGGACCTTGCTTAATTTCATCAAGTCCCTTTACAGGGTGGTCTaGCTCCTTTTTCATATCAGG	+
Preference number: 5 (lower is better) Translates to: EPVDLFLGSRTLLNFIKSLYRVV*LLFHIR Trigger: CCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAG...GGACTTGATGAAATTAAGCAAGGTCCTGGATCCCAGAAACAGGTCCACAGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGAGAGAGAGAATCACACAGAGACATCCATAGACTCTGCCTTAGGCACTGTCTTAGGTTGTTGGCTGGGTaGAGATTCATTACACCACTT	+
Preference number: 5 (lower is better) Translates to: RERESHRDIHRLCLRHCLRLLAG*RFITPL Trigger: AAGTGGTGTAATGAATCTCAACCCAGCCAACAACCT...AAGACAGTGCCTAAGGCAGAGTCTATGGATGTCTCTGTGTGATTCTCTCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGGAAGGTGACTGGAGGTaGTCATGGAGATCTGAGCCC	+
Preference number: 5 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLEGDWR*SWRSEP Trigger: GGGCTCAGATCTCCATGACAACCTCCAGTCACCTTC...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8
CDS GCA 90 bp	AGATCTGAGCCCGGCAGAAAGTCTTACTGTCCAACAGATCTACTGTaGTACCATAGCTGGGATCATAGAGATAGTTTTCTTCTTTCCATG	+
Preference number: 5 (lower is better) Translates to: RSEPGRKSYCPTDLL*YHSWDHRDSFLLSM Trigger: CATGGAAAGAAGAAAACTATCTCTATGATCCCAGCTATGGTAGCACAGTAGATCTGTTGGACAGTAAGACTTTCTGCCGGGCTCAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS-3UTR CAA 90 bp	TTGAACTACAGAGATACAAGAGCATGCTCATCGATCATTTCCAGGCCACTATTTCTTGGGTTGTGCTTTTaGGTGTGGGACTTTACAGGG	+
Preference number: 5 (lower is better) Translates to: LNYRDTRACSSIISRPLFLGLCF*VWDFTG Trigger: CCCTGTAAAGTCCCACACCAAAAAGCACAACCCAAG...AAATAGTGGCCTGGAAATGATCGATGAGCATGCTCTTGTATCTCTGTAGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS TCA 90 bp	GCTGGGTTGAGATTCATTACACCACTTCCTTCCAGAATCATGATCTaGATTAGATGCCAGGTCAAGGGTCTATTGCTCACTTCTATCACA	+
Preference number: 5 (lower is better) Translates to: AGLRFITPLPSRIMI*IRCQVKGLLLTSIT Trigger: TGTGATAGAAGTGAGCAATAGACCCTTGACCTGGCATCTAATTCAGATCATGATTCTGGAAGGAAGTGGTGTAATGAATCTCAACCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140503.8
CDS-3UTR CAA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGATCAGTCCTGGGTTCTaGTCTGGGCTCAAGAGAATG	+
Preference number: 5 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLISPGF*SGLKRM Trigger: CATTCTCTTGAGCCCAGACAAGAACCCAGGACTGAT...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	TATAATGAAGTAGGTGTAGGAAGGGTCAAATCCAGTTACAGGAATAAGAGAACCATCAGTCCTGGGTTCTaGTCTGGGCTCAAGAGAATG	+
Preference number: 5 (lower is better) Translates to: YNEVGVGRVKSSYRNKRTISPGF*SGLKRM Trigger: CATTCTCTTGAGCCCAGACAAGAACCCAGGACTGAT...GGTTCTCTTATTCCTGTAACTGGATTTGACCCTTCCTACACCTACTTCATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CTTGTAACCAGGTTAAGTCTCACAGTTCTAAAAAGCAACAGAATTCTCATCCAGGTCTTGACAATGACATaGTGTGCGGACTGGAAAAGG	+
Preference number: 5 (lower is better) Translates to: LVTRLSLTVLKSNRILIQVLTMT*CADWKR Trigger: CCTTTTCCAGTCCGCACACAATGTCATTGTCAAGAC...CTGGATGAGAATTCTGTTGCTTTTTAGAACTGTGAGACTTAACCTGGTTACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCTTGGGTTGTGCTTTTaGGTGTGGGACTTTACAGGG	+
Preference number: 5 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILGLCF*VWDFTG Trigger: CCCTGTAAAGTCCCACACCAAAAAGCACAACCCAAG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCATCAGTCCTGGGTTCTaGTCTGGGCTCAAGAGAATG	+
Preference number: 5 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIISPGF*SGLKRM Trigger: CATTCTCTTGAGCCCAGACAAGAACCCAGGACTGAT...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCGTCTTGACAATGACATaGTGTGCGGACTGGAAAAGG	+
Preference number: 5 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIVLTMT*CADWKR Trigger: CCTTTTCCAGTCCGCACACAATGTCATTGTCAAGAC...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	ATAGATCTCTCTATTCTGAGACTGAACGACTGCCTTCATACTGTCCATTTCAATCTTTACAGGGTGGTCTaGCTCCTTTTTCATATCAGG	+
Preference number: 5 (lower is better) Translates to: IDLSILRLNDCLHTVHFNLYRVV*LLFHIR Trigger: CCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAG...ATTGAAATGGACAGTATGAAGGCAGTCGTTCAGTCTCAGAATAGAGAGATCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090475.10 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	GTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTTGCTGATAAGTGAGTGCCTCTaGGGTTGTGCTTTTTGGTGT	+
Preference number: 5 (lower is better) Translates to: VVFEIFTSGSSLIRIHLLISECL*GCAFWC Trigger: ACACCAAAAAGCACAACCCAAGAGGCACTCACTTAT...CAGCAAATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGTCTTGACAATGACATaGTGTGCGGACTGGAAAAGG	+
Preference number: 5 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHVLTMT*CADWKR Trigger: CCTTTTCCAGTCCGCACACAATGTCATTGTCAAGAC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCTTTACAGGGTGGTCTaGCTCCTTTTTCATATCAGG	+
Preference number: 5 (lower is better) Translates to: HRKVVFEIFTSGSSLIRILYRVV*LLFHIR Trigger: CCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAG...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	CACAGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCATAAGTGAGTGCCTCTaGGGTTGTGCTTTTTGGTGT	+
Preference number: 5 (lower is better) Translates to: HRKVVFEIFTSGSSLIRIISECL*GCAFWC Trigger: ACACCAAAAAGCACAACCCAAGAGGCACTCACTTAT...GATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATAGGTTGTTGGCTGGGTaGAGATTCATTACACCACTT	+
Preference number: 5 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHRLLAG*RFITPL Trigger: AAGTGGTGTAATGAATCTCAACCCAGCCAACAACCT...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATTCGGTTTGTTCAGTCTaGACAATGACATTGTGTGCG	+
Preference number: 5 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHSVCSV*TMTLCA Trigger: CGCACACAATGTCATTGTCAAGACTGAACAAACCGA...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS-3UTR CAA 90 bp	AGAAAAGTAGTCTTTGAGATATTTACGTCCGGTTCTTCATTGATCAGAATCCATGATGGAAGGATCGGTTaGTTCAGTCTTGACAATGAC	+
Preference number: 5 (lower is better) Translates to: RKVVFEIFTSGSSLIRIHDGRIG*FSLDND Trigger: GTCATTGTCAAGACTGAACAAACCGATCCTTCCATC...ATGGATTCTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS GCA 72 bp	AGCTGCCCAGCTGAGCCTGCTGCCCTCGTGAACTCCTaGAGACTCATGCTGCACAGGTGTTCTCCGCTAATG	+
Preference number: 6 (lower is better) Translates to: SCPAEPAALVNS*RLMLHRCSPLM Trigger: CATTAGCGGAGAACACCTGTGCAGCATGAGTCTGCAGGAGTTCACGAGGGCAGCAGGCTCAGCTGGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 72 bp	TCGAACTCCTGGAAAGGGATGCAGCTAGCGTCTAGCTaGTTGGTGTCCAGGAGGTGCTGCAGCCATTCCCAC	+
Preference number: 6 (lower is better) Translates to: SNSWKGMQLASS*LVSRRCCSHSH Trigger: GTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CAA 72 bp	AACTCCTGGAAAGGGATGCAGCTAGCGTCTAGCTGGTaGGTGTCCAGGAGGTGCTGCAGCCATTCCCACACC	+
Preference number: 6 (lower is better) Translates to: NSWKGMQLASSW*VSRRCCSHSHT Trigger: GGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS GCA 72 bp	CAGCTAGCGTCTAGCTGGTTGGTGTCCAGGAGGTGCTaGAGCCATTCCCACACCTGGTATTTGGTCCAGTAC	+
Preference number: 6 (lower is better) Translates to: QLASSWLVSRRC*SHSHTWYLVQY Trigger: GTACTGGACCAAATACCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS GCA 72 bp	ATGCAGCTAGCGTCTAGCTGGTTGGTGTCCAGGAGGTaGTGCAGCCATTCCCACACCTGGTATTTGGTCCAG	+
Preference number: 6 (lower is better) Translates to: MQLASSWLVSRR*CSHSHTWYLVQ Trigger: CTGGACCAAATACCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CAA 90 bp	ACCGCTGGAAACATTGCATGTGGGGTAGCTGTCCGTCCAGGCTGGTaGCTGGTGAAGGAGGTTGTTGGCTGGGTTGAGATTCATTACACC	+
Preference number: 6 (lower is better) Translates to: TAGNIACGVAVRPGW*LVKEVVGWVEIHYT Trigger: GGTGTAATGAATCTCAACCCAGCCAACAACCTCCTTCACCAGCAACCAGCCTGGACGGACAGCTACCCCACATGCAATGTTTCCAGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CAA 90 bp	CTAATGTCGAACTCCTGGAAAGGGATGCAGCTAGCGTCTAGCTGGTaGGTGTCCAGGAGGTGCTGCAGCCATTCCCACACCTGGTATTTG	+
Preference number: 6 (lower is better) Translates to: LMSNSWKGMQLASSW*VSRRCCSHSHTWYL Trigger: CAAATACCAGGTGTGGGAATGGCTGCAGCACCTCCTGGACACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTTCGACATTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS TCA 72 bp	ACTGGAAAAGGTCACTGCTGCATTGGCCGTTCCACTTaGGATGCTGTAGGTTGCTGTAGAGCAGCTGCCCAG	+
Preference number: 6 (lower is better) Translates to: TGKGHCCIGRST*DAVGCCRAAAQ Trigger: CTGGGCAGCTGCTCTACAGCAACCTACAGCATCTCAAGTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 72 bp	ATGCTGCACAGGTGTTCTCCGCTAATGTCGAACTCCTaGAAAGGGATGCAGCTAGCGTCTAGCTGGTTGGTG	+
Preference number: 6 (lower is better) Translates to: MLHRCSPLMSNS*KGMQLASSWLV Trigger: CACCAACCAGCTAGACGCTAGCTGCATCCCTTTCCAGGAGTTCGACATTAGCGGAGAACACCTGTGCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8 ENSMUST00000151265.2
CDS CCA 72 bp	GTGACTCTGCAACTGGAAGGTGACTGGAGGTTGTCATaGAGATCTGAGCCCGGCAGAAAGTCTTACTGTCCA	+
Preference number: 6 (lower is better) Translates to: VTLQLEGDWRLS*RSEPGRKSYCP Trigger: TGGACAGTAAGACTTTCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGAGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS CAA 90 bp	TCTGACTTCAGGAACCTGAAGATGCCTTCCGAACGGTCTTCCCATTaGATCAGTCCTGGGTTCTTGTCTGGGCTCAAGAGAATGTCTCGG	+
Preference number: 6 (lower is better) Translates to: SDFRNLKMPSERSSH*ISPGFLSGLKRMSR Trigger: CCGAGACATTCTCTTGAGCCCAGACAAGAACCCAGGACTGATCAAATGGGAAGACCGTTCGGAAGGCATCTTCAGGTTCCTGAAGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS CCA 72 bp	GATGCCTTCCGAACGGTCTTCCCATTTGATCAGTCCTaGGTTCTTGTCTGGGCTCAAGAGAATGTCTCGGAT	+
Preference number: 6 (lower is better) Translates to: DAFRTVFPFDQS*VLVWAQENVSD Trigger: ATCCGAGACATTCTCTTGAGCCCAGACAAGAACCCAGGACTGATCAAATGGGAAGACCGTTCGGAAGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS CAA 72 bp	TATCAGGTGACTCTGCAACTGGAAGGTGACTGGAGGTaGTCATGGAGATCTGAGCCCGGCAGAAAGTCTTAC	+
Preference number: 6 (lower is better) Translates to: YQVTLQLEGDWR*SWRSEPGRKSY Trigger: GTAAGACTTTCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGAGTCACCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS CAA 72 bp	TCCGAACGGTCTTCCCATTTGATCAGTCCTGGGTTCTaGTCTGGGCTCAAGAGAATGTCTCGGATGAACTCC	+
Preference number: 6 (lower is better) Translates to: SERSSHLISPGF*SGLKRMSRMNS Trigger: GGAGTTCATCCGAGACATTCTCTTGAGCCCAGACAAGAACCCAGGACTGATCAAATGGGAAGACCGTTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9
CDS CCA 72 bp	TTTTCATATCAGGTGACTCTGCAACTGGAAGGTGACTaGAGGTTGTCATGGAGATCTGAGCCCGGCAGAAAG	+
Preference number: 6 (lower is better) Translates to: FSYQVTLQLEGD*RLSWRSEPGRK Trigger: CTTTCTGCCGGGCTCAGATCTCCATGACAACCTCCAGTCACCTTCCAGTTGCAGAGTCACCTGATATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS CAA 90 bp	GTGTTCATGATGGAAGGATCGGTTTGTTCAGTCTTGACAATGACATaGTGTGCGGACTGGAAAAGGTCACTGCTGCATTGGCCGTTCCAC	+
Preference number: 6 (lower is better) Translates to: VFMMEGSVCSVLTMT*CADWKRSLLHWPFH Trigger: GTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCTTCCATCATGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS GCA 72 bp	AGGATCGGTTTGTTCAGTCTTGACAATGACATTGTGTaGGGACTGGAAAAGGTCACTGCTGCATTGGCCGTT	+
Preference number: 6 (lower is better) Translates to: RIGLFSLDNDIV*GLEKVTAALAV Trigger: AACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS CCA 72 bp	GTTTGTTCAGTCTTGACAATGACATTGTGTGCGGACTaGAAAAGGTCACTGCTGCATTGGCCGTTCCACTTG	+
Preference number: 6 (lower is better) Translates to: VCSVLTMTLCAD*KRSLLHWPFHL Trigger: CAAGTGGAACGGCCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS CCA 72 bp	CTTGGGTTGTGCTTTTTGGTGTGGGACTTTACAGGGTaGTCTTGCTCCTTTTTCATATCAGGTGACTCTGCA	+
Preference number: 6 (lower is better) Translates to: LGLCFLVWDFTG*SCSFFISGDSA Trigger: TGCAGAGTCACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAGTCCCACACCAAAAAGCACAACCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS CCA 72 bp	CTTGGGTTGTGCTTTTTGGTGTGGGACTTTACAGGGTaGTCTTGCTCCTTTTTCATATCAGGTGACTCTGCT	+
Preference number: 6 (lower is better) Translates to: LGLCFLVWDFTG*SCSFFISGDSA Trigger: AGCAGAGTCACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAGTCCCACACCAAAAAGCACAACCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111176.9
CDS CAA 72 bp	ATGGAAGGATCGGTTTGTTCAGTCTTGACAATGACATaGTGTGCGGACTGGAAAAGGTCACTGCTGCATTGG	+
Preference number: 6 (lower is better) Translates to: MEGSVCSVLTMT*CADWKRSLLHW Trigger: CCAATGCAGCAGTGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8 ENSMUST00000140503.8
CDS GCA 72 bp	TTGTGCTTTTTGGTGTGGGACTTTACAGGGTGGTCTTaGTCCTTTTTCATATCAGGTGACTCTGCAACTGGA	+
Preference number: 6 (lower is better) Translates to: LCFLVWDFTGWS*SFFISGDSATG Trigger: TCCAGTTGCAGAGTCACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAGTCCCACACCAAAAAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS GCA 72 bp	TTGTGCTTTTTGGTGTGGGACTTTACAGGGTGGTCTTaGTCCTTTTTCATATCAGGTGACTCTGCTACTGTG	+
Preference number: 6 (lower is better) Translates to: LCFLVWDFTGWS*SFFISGDSATV Trigger: CACAGTAGCAGAGTCACCTGATATGAAAAAGGAGCAAGACCACCCTGTAAAGTCCCACACCAAAAAGCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111176.9
CDS GCA 72 bp	CCCGGCAGAAAGTCTTACTGTCCAACAGATCTACTGTaGTACCATAGCTGGGATCATAGAGATAGTTTTCTT	+
Preference number: 6 (lower is better) Translates to: PGRKSYCPTDLL*YHSWDHRDSFL Trigger: AAGAAAACTATCTCTATGATCCCAGCTATGGTAGCACAGTAGATCTGTTGGACAGTAAGACTTTCTGCCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000125788.8
CDS CAA 72 bp	CATGTGTTCATGATGGAAGGATCGGTTTGTTCAGTCTaGACAATGACATTGTGTGCGGACTGGAAAAGGTCA	+
Preference number: 6 (lower is better) Translates to: HVFMMEGSVCSV*TMTLCADWKRS Trigger: TGACCTTTTCCAGTCCGCACACAATGTCATTGTCAAGACTGAACAAACCGATCCTTCCATCATGAACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090475.10 ENSMUST00000111174.8 ENSMUST00000111176.9 ENSMUST00000125788.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu