Pregenerated sensors for EHD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027293Ensembl transcript IDs: ENSMUST00000028755.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACGGAGAGGACGGAACTTTGGCCACGGACATTCAGCGAGTCAGTaGCAGAGCAGACTTCAGGCCCAGGCACCACCCCTCCCACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SRRGRNFGHGHSASQ*QSRLQAQAPPLPPQ Trigger: CTGGGGTGGGAGGGGTGGTGCCTGGGCCTGAAGTCTGCTCTGCCACTGACTCGCTGAATGTCCGTGGCCAAAGTTCCGTCCTCTCCGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 90 bp | TTGGCAGGGTCAGGCAGCAGGTGCTGGGACAAGACAGGTTCTCCTTaGCTGGCTGCCTACTCTGATGGGGACTGCAGATGGGCCCACACA | + |
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Preference number: 1 (lower is better) Translates to: LAGSGSRCWDKTGSP*LAAYSDGDCRWAHT Trigger: TGTGTGGGCCCATCTGCAGTCCCCATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCCCAGCACCTGCTGCCTGACCCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | CAGGGTCAGGCAGCAGGTGCTGGGACAAGACAGGTTCTCCTTGCCTaGCTGCCTACTCTGATGGGGACTGCAGATGGGCCCACACAGACA | + |
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Preference number: 1 (lower is better) Translates to: QGQAAGAGTRQVLLA*LPTLMGTADGPTQT Trigger: TGTCTGTGTGGGCCCATCTGCAGTCCCCATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCCCAGCACCTGCTGCCTGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | GAATTCCTAACTGAGGGAGGCTTGGCAGGGTCAGGCAGCAGGTGCTaGGACAAGACAGGTTCTCCTTGCCTGGCTGCCTACTCTGATGGG | + |
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Preference number: 1 (lower is better) Translates to: EFLTEGGLAGSGSRC*DKTGSPCLAAYSDG Trigger: CCCATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCCCAGCACCTGCTGCCTGACCCTGCCAAGCCTCCCTCAGTTAGGAATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 90 bp | TCCAGCACAGCTCTGATGGCTCCAGTGAGTCCCTGGCTCAATCCCTaGGTGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSTALMAPVSPWLNP*VPRLRQPVSHLHSS Trigger: AGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCACTCAGGGATTGAGCCAGGGACTCACTGGAGCCATCAGAGCTGTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 90 bp | TATGAATTCCTAACTGAGGGAGGCTTGGCAGGGTCAGGCAGCAGGTaGTGGGACAAGACAGGTTCTCCTTGCCTGGCTGCCTACTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: YEFLTEGGLAGSGSR*WDKTGSPCLAAYSD Trigger: ATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCCCAGCACCTGCTGCCTGACCCTGCCAAGCCTCCCTCAGTTAGGAATTCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 90 bp | TGGGGACATTCAGTGGTTGAAGGGCACACAGGTCTTGCCAGGGGCTaGCAGTTTGTGAATTATGAATTCCTAACTGAGGGAGGCTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: WGHSVVEGHTGLARG*QFVNYEFLTEGGLA Trigger: TGCCAAGCCTCCCTCAGTTAGGAATTCATAATTCACAAACTGTCAGCCCCTGGCAAGACCTGTGTGCCCTTCAACCACTGAATGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | AGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTaGGACTCCACACAAATCAAGACAAGCTTTATTGAATTTAAATTC | + |
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Preference number: 1 (lower is better) Translates to: SSGWGCSRFTWVRRL*DSTQIKTSFIEFKF Trigger: GAATTTAAATTCAATAAAGCTTGTCTTGATTTGTGTGGAGTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | AGGGATGCTGTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTaGTCACTGCTGCGCTGTGATTCCTACTTCGTAAGTGATGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RDAVQIHSFLLLLVM*SLLRCDSYFVSDGD Trigger: GTCACCATCACTTACGAAGTAGGAATCACAGCGCAGCAGTGACCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | CCAATCCTGGCCCAGATAGGCACTCCTGATGTGAGGTGTCTAGCTTaGAAGAAAAGGTATTACAGAGATTTCTTCAGAGAGGCTACATCT | + |
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Preference number: 1 (lower is better) Translates to: PILAQIGTPDVRCLA*KKRYYRDFFREATS Trigger: AGATGTAGCCTCTCTGAAGAAATCTCTGTAATACCTTTTCTTCCAAGCTAGACACCTCACATCAGGAGTGCCTATCTGGGCCAGGATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 90 bp | TGTTTTTGTGAAGATTCAGGGATGCTGTTCAGATTCATTCATTTCTaGTGCTGTTGGTCATGTGGTCACTGCTGCGCTGTGATTCCTACT | + |
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Preference number: 1 (lower is better) Translates to: CFCEDSGMLFRFIHF*CCWSCGHCCAVIPT Trigger: AGTAGGAATCACAGCGCAGCAGTGACCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCTTCACAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 90 bp | ACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTaGGTATTAGTCTTCTCTTTGGTTTTTAATCTATGGAAGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: TADGPTQTWHILFQT*VLVFSLVFNLWKAE Trigger: TTCTGCCTTCCATAGATTAAAAACCAAAGAGAAGACTAATACCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | CACCAGGTCAGAGCAAGCTTAGCTGCTAGGCATCTCCCAGCAGAAGGTGGAGAGGATGGGGACTGCAGATaGGCCCACACAGACATGGCA | + |
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Preference number: 2 (lower is better) Translates to: HQVRASLAARHLPAEGGEDGDCR*AHTDMA Trigger: TGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCATC...CTCTCCACCTTCTGCTGGGAGATGCCTAGCAGCTAAGCTTGCTCTGACCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTGGGCATTCAGCGAGTCAGTaGCAGAGCAGACTTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: WGLQMGPHRHGTSSFKPGHSASQ*QSRLQA Trigger: GGCCTGAAGTCTGCTCTGCCACTGACTCGCTGAATG...CCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CAA 90 bp | CCTGCCCTACATATGAGAAAACCGAGTCACGGAGAGGACGGAACTTaGGCCACGGACATTCAGCGAGTCAGTGGCAGAGCAGACTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PALHMRKPSHGEDGT*ATDIQRVSGRADFR Trigger: CCTGAAGTCTGCTCTGCCACTGACTCGCTGAATGTCCGTGGCCAAAGTTCCGTCCTCTCCGTGACTCGGTTTTCTCATATGTAGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTACTTCGTAAGTGATGGTGACAGTGTTCTTCTGCTGGGCCACAGAGCAGGGGGGTCAGGCAGCAGGTaGTGGGACAAGACAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SYFVSDGDSVLLLGHRAGGSGSR*WDKTGS Trigger: AGAACCTGTCTTGTCCCAGCACCTGCTGCCTGACCC...CCCTGCTCTGTGGCCCAGCAGAAGAACACTGTCACCATCACTTACGAAGTAGGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGCTGCTGTTGGTCATGTaGTCACTGCTGCGCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: LPGITSPWTLTQIQLQPRLLLVM*SLLRCD Trigger: ATCACAGCGCAGCAGTGACCACATGACCAACAGCAG...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGTCATGTGGTCACTGCTaGGCTGTGATTCCTACTTCG | + |
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Preference number: 2 (lower is better) Translates to: LPGITSPWTLTQIQLQPRSCGHC*AVIPTS Trigger: CGAAGTAGGAATCACAGCGCAGCAGTGACCACATGA...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTACTTCGTAAGTGATGGTGACAGTGTTCTTCTGCTGGGCCACAGAGCAGGGGGGCCCACACAGACATaGCACATCCTCTTTCAAACC | + |
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Preference number: 2 (lower is better) Translates to: SYFVSDGDSVLLLGHRAGGPTQT*HILFQT Trigger: GGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCC...CCCTGCTCTGTGGCCCAGCAGAAGAACACTGTCACCATCACTTACGAAGTAGGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTTTTGCTGCCTCTCAGTaGCCCCTGAAGGACAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: VPRKASSEALYRSDLAISFAASQ*PLKDKE Trigger: CTCTTTGTCCTTCAGGGGGCACTGAGAGGCAGCAAA...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTTGGTCATGTGGTCACTaGTGCGCTGTGATTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: VPRKASSEALYRSDLAISWSCGH*CAVIPT Trigger: AGTAGGAATCACAGCGCAGCAGTGACCACATGACCA...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | GACACAAATACAGTTACAGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATCTGCCTCCCAAGTGCTaGGAAATGGGTGTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DTNTVTAPGSNIHLCVSNLPPKC*EMGVSS Trigger: AGAGCTCACACCCATTTCGCAGCACTTGGGAGGCAG...ATTGGACACACACAGGTGAATGTTTGATCCCGGGGCTGTAACTGTATTTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTCAGGGATGCTGTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTGGTGCTCTCGCTTTACCTaGGTCCGAAGGCTCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RFRDAVQIHSFLLLLVMWCSRFT*VRRLWD Trigger: GTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCA...CCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | GACACAAATACAGTTACAGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATCTGACTAGGTGGGCTTaGGAAAGAACACTGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DTNTVTAPGSNIHLCVSNLTRWA*ERTLKR Trigger: CCTCTTCAGTGTTCTTTCCCAAGCCCACCTAGTCAG...ATTGGACACACACAGGTGAATGTTTGATCCCGGGGCTGTAACTGTATTTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTAATAAAAACACGCTTTTTCATTCATTTCTGCTaGTGTTGGTCATGTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SPGIKHSPVCVQLIKTRFFIHFC*CWSCGH Trigger: GTGACCACATGACCAACAGCAGCAGAAATGAATGAA...AAAGCGTGTTTTTATTAATTGGACACACACAGGTGAATGTTTGATCCCGGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTCAGGGATGCTGTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTGGGTGAGGTGTCTAGCTTaGAAGAAAAGGTATTACAGA | + |
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Preference number: 2 (lower is better) Translates to: RFRDAVQIHSFLLLLVMWVRCLA*KKRYYR Trigger: TCTGTAATACCTTTTCTTCCAAGCTAGACACCTCAC...CCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTAATAAAAACACGCTTTTTGGTTTTTAATCTATaGAAGGCAGAAACTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SPGIKHSPVCVQLIKTRFLVFNL*KAETLC Trigger: ACAGAGAGTTTCTGCCTTCCATAGATTAAAAACCAA...AAAGCGTGTTTTTATTAATTGGACACACACAGGTGAATGTTTGATCCCGGGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | GCAGCAGGTGCTGGGACAAGACAGGTTCTCCTTGCCTaGCTGCCTACTCTGATGGGGACTGCAGATGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: AAGAGTRQVLLA*LPTLMGTADGP Trigger: GGGCCCATCTGCAGTCCCCATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCCCAGCACCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 72 bp | GGACAAGACAGGTTCTCCTTGCCTGGCTGCCTACTCTaGTGGGGACTGCAGATGGGCCCACACAGACATGGC | + |
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Preference number: 3 (lower is better) Translates to: GQDRFSLPGCLL*WGLQMGPHRHG Trigger: GCCATGTCTGTGTGGGCCCATCTGCAGTCCCCATCAGAGTAGGCAGCCAGGCAAGGAGAACCTGTCTTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CAA 90 bp | CACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGGGGGACATTCAGTGGTaGAAGGGCACACAGGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: HSQLRMGLLSLYLGPKALGDIQW*KGTQVL Trigger: CAAGACCTGTGTGCCCTTCAACCACTGAATGTCCCC...CAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 72 bp | GGTTCTCCTTGCCTGGCTGCCTACTCTGATGGGGACTaGAGATGGGCCCACACAGACATGGCACATCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GSPCLAAYSDGD*RWAHTDMAHPL Trigger: AAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCATCAGAGTAGGCAGCCAGGCAAGGAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | ACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTaGGTCCGAAGGCTCTGGGACTCCACACAAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: THSSGWGCSRFT*VRRLWDSTQIK Trigger: CTTGATTTGTGTGGAGTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 72 bp | TCTAGTGTCCGGGATCTGCCCTCCCTGCCCTACATATaGGAAAACCGAGTCACGGAGAGGACGGAACTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSVRDLPSLPYI*ENRVTERTELW Trigger: CCAAAGTTCCGTCCTCTCCGTGACTCGGTTTTCTCATATGTAGGGCAGGGAGGGCAGATCCCGGACACTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | ACTCTGATGGGGACTGCAGATGGGCCCACACAGACATaGCACATCCTCTTTCAAACCTGGGTATTAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: TLMGTADGPTQT*HILFQTWVLVF Trigger: GAAGACTAATACCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCATCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTAATAAAAACACGCTTTAAGGGCACACAGGTCTaGCCAGGGGCTGACAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: SPGIKHSPVCVQLIKTRFKGTQV*PGADSL Trigger: CAAACTGTCAGCCCCTGGCAAGACCTGTGTGCCCTT...AAAGCGTGTTTTTATTAATTGGACACACACAGGTGAATGTTTGATCCCGGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 72 bp | TCAGTGGTTGAAGGGCACACAGGTCTTGCCAGGGGCTaGCAGTTTGTGAATTATGAATTCCTAACTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SVVEGHTGLARG*QFVNYEFLTEG Trigger: TCCCTCAGTTAGGAATTCATAATTCACAAACTGTCAGCCCCTGGCAAGACCTGTGTGCCCTTCAACCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 72 bp | GAAGATTCAGGGATGCTGTTCAGATTCATTCATTTCTaGTGCTGTTGGTCATGTGGTCACTGCTGCGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: EDSGMLFRFIHF*CCWSCGHCCAV Trigger: CACAGCGCAGCAGTGACCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | TTAAAAATCAAACAACATCATCAATCACCAGGGCGCTaGTCTCTTCCACTCACAGCTCAGGATGGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LKIKQHHQSPGR*SLPLTAQDGAA Trigger: AGCAGCCCCATCCTGAGCTGTGAGTGGAAGAGACCAGCGCCCTGGTGATTGATGATGTTGTTTGATTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTTGTGAGGTGTCTAGCTaGGAAGAAAAGGTATTACAG | + |
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Preference number: 3 (lower is better) Translates to: VPRKASSEALYRSDLAISCEVSS*EEKVLQ Trigger: CTGTAATACCTTTTCTTCCAAGCTAGACACCTCACA...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 72 bp | AATAAATTAGGTCCTTTGCTGCCTCTCAGTGCCCCCTaGAGGACAAAGAGGCTCATGGTAACTTACTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NKLGPLLPLSAP*RTKRLMVTYCP Trigger: TGGACAGTAAGTTACCATGAGCCTCTTTGTCCTTCAGGGGGCACTGAGAGGCAGCAAAGGACCTAATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR GCA 72 bp | GATTCAGGGATGCTGTTCAGATTCATTCATTTCTGCTaGTGTTGGTCATGTGGTCACTGCTGCGCTGTGATT | + |
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Preference number: 3 (lower is better) Translates to: DSGMLFRFIHFC*CWSCGHCCAVI Trigger: AATCACAGCGCAGCAGTGACCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | GCCCAGATAGGCACTCCTGATGTGAGGTGTCTAGCTTaGAAGAAAAGGTATTACAGAGATTTCTTCAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: AQIGTPDVRCLA*KKRYYRDFFRE Trigger: CTCTCTGAAGAAATCTCTGTAATACCTTTTCTTCCAAGCTAGACACCTCACATCAGGAGTGCCTATCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CCA 72 bp | GTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTaGTCACTGCTGCGCTGTGATTCCTACTTCGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: VQIHSFLLLLVM*SLLRCDSYFVS Trigger: ACTTACGAAGTAGGAATCACAGCGCAGCAGTGACCACATGACCAACAGCAGCAGAAATGAATGAATCTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR TCA 72 bp | CGCATTTTAGAGACAGACTCACGAGACATACATTTGTaGTTATATTTAGGTAGATATATGACAACTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RILETDSRDIHL*LYLGRYMTTVQ Trigger: CTGCACAGTTGTCATATATCTACCTAAATATAATCACAAATGTATGTCTCGTGAGTCTGTCTCTAAAATGCG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CCA 90 bp | TCAGCGAGTCAGTGGCAGAGCAGACTTCAGGCCCAGGCACCACCCCTCCCACCCGGCAGCACCTTGCGCTaGTACAGAGAGCGCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SASQWQSRLQAQAPPLPPGSTLR*YRERRP Trigger: CGGCCTGCGCTCTCTGTACCAGCGCAAGGTGCTGCC...GGGTGGGAGGGGTGGTGCCTGGGCCTGAAGTCTGCTCTGCCACTGACTCGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | CACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGAGGGCCCCTCTGTGGTaGCATCAAAGGCGCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HSQLRMGLLSLYLGPKALRAPLW*HQRRRP Trigger: AGGGCGGCGCCTTTGATGGCACCACAGAGGGGCCCT...CAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR TCA 90 bp | TCAGCGAGTCAGTGGCAGAGCAGACTTCAGGCCCAGGCACCACCCCTCCCACCCCGTCAAAGAGCAGGATaGTCCTGTCAACCCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SASQWQSRLQAQAPPLPPRQRAG*SCQPSR Trigger: CCGAGAGGGTTGACAGGATCATCCTGCTCTTTGACG...GGGTGGGAGGGGTGGTGCCTGGGCCTGAAGTCTGCTCTGCCACTGACTCGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR TCA 90 bp | AGTAGGAGGCAGCCCCTGCGGCGCCTGACTAGGTGGGCTTGGGAAAGAACACTGGGCCCCGGAAGGCCTTaGTCGCCTCTGAGAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRQPLRRLTRWAWERTLGPGRP*SPLRTH Trigger: ATGAGTTCTCAGAGGCGATCAAGGCCTTCCGGGGCC...CAGTGTTCTTTCCCAAGCCCACCTAGTCAGGCGCCGCAGGGGCTGCCTCCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGAGGCAGCCCCTGCGGCGCCTGACTAGGTGGGCTTGGGAAAGAACACTGTTCTCCAGCTGCTCCTaGATGGCCTTGACCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRQPLRRLTRWAWERTLFSSCS*MALTSG Trigger: CCCTGAGGTCAAGGCCATGCAGGAGCAGCTGGAGAA...CAGTGTTCTTTCCCAAGCCCACCTAGTCAGGCGCCGCAGGGGCTGCCTCCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGGACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTGCCCCATAGCCCTGGTTaGAGGGCCCCTCTGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGDCRWAHTDMAHPLSNLPHSPG*RAPLWC Trigger: GCACCACAGAGGGGCCCTTCAACCAGGGCTATGGGG...CAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | TGGGGACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTGGGCCAGCGGCAGCACCTTaGGCTGGTACAGAGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WGLQMGPHRHGTSSFKPGPAAAP*AGTESA Trigger: TGCGCTCTCTGTACCAGCGCAAGGTGCTGCCGCTGG...CCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | CCACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTATTGAGTTTGCGCACTaGAGCCTTCTGGGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTAQDGAALALPGSEGSIEFAH*SLLGQA Trigger: AGCCTGCCCCAGAAGGCTGCAGTGCGCAAACTCAAT...AGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCCGGGATCTGCCCTCCCTGCCCTACATATGAGAAAACCGAGTCACGGAGAAAGCATTCCCAGGGGTaGTTCCCTCAGTCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGICPPCPTYEKTESRRKHSQG*FPQSPH Trigger: ATGGGGAGACTGAGGGAAGCACCCCTGGGAATGCTT...TCTCCGTGACTCGGTTTTCTCATATGTAGGGCAGGGAGGGCAGATCCCGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | CACCAGGTCAGAGCAAGCTTAGCTGCTAGGCATCTCCCAGCAGAAGGTGGAGAGCCTCGGCTTATGCGCTaGTTCTCCCCAGACAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: HQVRASLAARHLPAEGGEPRLMR*FSPDRM Trigger: CATTCTGTCTGGGGAGAAGCAGCGCATAAGCCGAGG...CTCTCCACCTTCTGCTGGGAGATGCCTAGCAGCTAAGCTTGCTCTGACCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTCCTCCTCGTCTAGCATaGCGTCGCAGTCGCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKASSEALYRSDLAISPPRLA*RRSRSR Trigger: CCGACTGCGACTGCGACGGCATGCTAGACGAGGAGG...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGGAGGCAGCCCCTGCGGCGCCTGACTAGGTGGGCTTGGGAAAGAACACTGTGCTGTGTATCCACTTaGTCAGCCTTGTTCAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SRRQPLRRLTRWAWERTLCCVST*SALFST Trigger: GGTACTGAACAAGGCTGACCAAGTGGATACACAGCA...CAGTGTTCTTTCCCAAGCCCACCTAGTCAGGCGCCGCAGGGGCTGCCTCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | CGCTTTACCTGGGTCCGAAGGCTCTGGGACTCCACACAAATCAAGACAAGCTTTCCGCCCTGCACCATCTaGGTGGGCATGTTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFTWVRRLWDSTQIKTSFPPCTI*VGMFIS Trigger: GGAGATGAACATGCCCACGCAGATGGTGCAGGGCGG...AAAGCTTGTCTTGATTTGTGTGGAGTCCCAGAGCCTTCGGACCCAGGTAAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTCGCACTGCAGCCTTCTaGGGCAGGCTCTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPRKASSEALYRSDLAISRTAAF*GRLWMS Trigger: AGACATCCAGAGCCTGCCCCAGAAGGCTGCAGTGCG...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGGAGGCCCATCAGGGATaGGATCTTGTTGGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPGITSPWTLTQIQLQPREAHQG*DLVGQH Trigger: ATGCTGACCAACAAGATCTCATCCCTGATGGGCCTC...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGGGACTCATGCCTGGGAAATCTTaGTCCAGTAAGTATCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLRMGLLSLYLGPKALGLMPGKS*SSKYLM Trigger: CATCAGATACTTACTGGAGCAAGATTTCCCAGGCAT...GAGTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTGGGATGCTCTTCAGAACTTaGTTGGGCAGCTGTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WGLQMGPHRHGTSSFKPGMLFRT*LGSCEH Trigger: GTGCTCACAGCTGCCCAACCAAGTTCTGAAGAGCAT...CCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGGTCAGAGCAAGCTTAGCTGCTAGGCATCTCCCAGCAGAAGGTGGAGAGCTTGCCATTGATGGGTaGCAGCGTGTAAAAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQVRASLAARHLPAEGGELAIDG*QRVKEF Trigger: GAACTCTTTTACACGCTGTCACCCATCAATGGCAAG...CTCTCCACCTTCTGCTGGGAGATGCCTAGCAGCTAAGCTTGCTCTGACCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCCGGGATCTGCCCTCCCTGCCCTACATATGAGAAAACCGAGTCACGGAGACCGATATCTTGCCATTaGTGGGTGACAGCGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGICPPCPTYEKTESRRPISCH*WVTACK Trigger: TTTACACGCTGTCACCCATCAATGGCAAGATATCGG...TCTCCGTGACTCGGTTTTCTCATATGTAGGGCAGGGAGGGCAGATCCCGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTCATACCCTCGGCTTATaGGCTGCTTCTCCCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPRKASSEALYRSDLAISHTLGL*AASPQT Trigger: TGTCTGGGGAGAAGCAGCGCATAAGCCGAGGGTATG...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTGTGGGGGCAGGCTGTTaGGCAGCTCGTAGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPDFDSLCHTYILLWIIFVGAGC*AARSRP Trigger: TGGACGGCTACGAGCTGCCCAACAGCCTGCCCCCAC...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | AATTATGAATTCCTAACTGAGGGAGGCTTGGCAGGGTCAGGCAGCAGGTGCTGGCTGGACCAATTCTCATaGCTGGGAAATCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NYEFLTEGGLAGSGSRCWLDQFS*LGNLAP Trigger: TGGAGCAAGATTTCCCAGGCATGAGAATTGGTCCAG...CCAGCACCTGCTGCCTGACCCTGCCAAGCCTCCCTCAGTTAGGAATTCATAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTAGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTTGGCCATATCTCTCAGGGAAGTCCCCTaGAGAAATCTGGTATTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPRKASSEALYRSDLAISLREVP*RNLVFS Trigger: CGAGAATACCAGATTTCTGCAGGGGACTTCCCTGAG...AGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCTAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGACTGCAGATGGGCCCACACAGACATGGCACATCCTCTTTCAAACCTGGGACTAAGCTTTCGGAATaGCTTTTTGGGATCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGLQMGPHRHGTSSFKPGTKLSE*LFGIHN Trigger: GTTGTGGATCCCAAAAAGCCATTCCGAAAGCTTAGT...CCCAGGTTTGAAAGAGGATGTGCCATGTCTGTGTGGGCCCATCTGCAGTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTTTCTGGGGCAGGCTCTaGATGTCTCGGAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPDFDSLCHTYILLWIIFFWGRL*MSRKRS Trigger: GGACCTCTTCCGAGACATCCAGAGCCTGCCCCAGAA...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR TCA 90 bp | GACACAAATACAGTTACAGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTTGGTTGGGCAGCTGTaGGCACATGAATCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTNTVTAPGSNIHLCVSNLVGQL*AHESVQ Trigger: CTGAACAGATTCATGTGCTCACAGCTGCCCAACCAA...ATTGGACACACACAGGTGAATGTTTGATCCCGGGGCTGTAACTGTATTTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTCGGATTTTGTCATCCTaGCCCCGGAAGGCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: CPDFDSLCHTYILLWIIFRILSS*PRKALI Trigger: GATCAAGGCCTTCCGGGGCCAGGATGACAAAATCCG...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTAATAAAAACACGCTTTCAGCCTCGATCAGCTTaGGCTTCAGTGAGTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SPGIKHSPVCVQLIKTRFQPRSA*ASVSGT Trigger: AGTTCCACTCACTGAAGCCCAAGCTGATCGAGGCTG...AAAGCGTGTTTTTATTAATTGGACACACACAGGTGAATGTTTGATCCCGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CAA 72 bp | AGAAAGGCCTCCTCTGAGGCTCTGTACAGAAGTGACTaGGCCATATCTACATTGAACATACGGACGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKASSEALYRSD*AISTLNIRTHF Trigger: AAAATGCGTCCGTATGTTCAATGTAGATATGGCCAAGTCACTTCTGTACAGAGCCTCAGAGGAGGCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR GCA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTGACTTTGGCCAACCTTaGACGCTTGATGAGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CPDFDSLCHTYILLWIIFDFGQP*TLDEVI Trigger: AATGACCTCATCAAGCGTGCAAGGTTGGCCAAAGTC...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CCA 90 bp | AGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATTAATAAAAACACGCTTTGGGATGAGATCTTGTTaGTCAGCATGTTGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGIKHSPVCVQLIKTRFGMRSC*SACCPQ Trigger: CTGTGGACAACATGCTGACCAACAAGATCTCATCCC...AAAGCGTGTTTTTATTAATTGGACACACACAGGTGAATGTTTGATCCCGGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| 3UTR CAA 72 bp | CACATCCTCTTTCAAACCTGGGTATTAGTCTTCTCTTaGGTTTTTAATCTATGGAAGGCAGAAACTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HILFQTWVLVFS*VFNLWKAETLC Trigger: ACAGAGAGTTTCTGCCTTCCATAGATTAAAAACCAAAGAGAAGACTAATACCCAGGTTTGAAAGAGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS GCA 90 bp | GGTACAGAGAGCGCAGGCCGCCCGTCACCGTCTGCACCGCGTCCATaGCGCCCGAGCGCTCGCGCCCGCCAGCCTGCCGCCCCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTESAGRPSPSAPRP*RPSARARQPAAPSS Trigger: GCTGGATGGGGCGGCAGGCTGGCGGGCGCGAGCGCTCGGGCGGCATGGACGCGGTGCAGACGGTGACGGGCGGCCTGCGCTCTCTGTACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGGCAGCCCCTGCGGCGCCTGACTAGGTGGGCTTGGGAAAGAACACTGTCAAAGAGCCGGCGGTaGTCGGTGTTTTGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRQPLRRLTRWAWERTLSKSRR*SVFCRG Trigger: GCCCCTGCAAAACACCGACAACCGCCGGCTCTTTGA...CAGTGTTCTTTCCCAAGCCCACCTAGTCAGGCGCCGCAGGGGCTGCCTCCTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CAA 90 bp | CCACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTCCGTCCAGCTTGATCTaGATGAGGTGCTTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLTAQDGAALALPGSEGSPSSLI*MRCLAS Trigger: GCTGGCCAAGCACCTCATCAAGATCAAGCTGGACGG...AGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS CCA 90 bp | AAGGCGCCGCCCTGCACCATCTGCGTGGGCATGTTCATCTCCTCCTaGCTGATGAGGCCCATCAGGGATGAGATCTTGTTGGTCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: KAPPCTICVGMFISS*LMRPIRDEILLVSM Trigger: CATGCTGACCAACAAGATCTCATCCCTGATGGGCCTCATCAGCCAGGAGGAGATGAACATGCCCACGCAGATGGTGCAGGGCGGCGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS-3UTR CAA 90 bp | CACTCACAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGAGTACCACTCGGATTTaGTCATCCTGGCCCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSQLRMGLLSLYLGPKALSTTRI*SSWPRK Trigger: CTTCCGGGGCCAGGATGACAAAATCCGAGTGGTACT...CAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTGTGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGGGACTCTCCACTTGGTCAGCCTaGTTCAGTACCACTCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: QLRMGLLSLYLGPKALGLSTWSA*FSTTRI Trigger: AATCCGAGTGGTACTGAACAAGGCTGACCAAGTGGA...GAGTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCCGGGATCTGCCCTCCCTGCCCTACATATGAGAAAACCGAGTCACGGAGATCGTCATACACCGGCTaGTCTTTAGCCACGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSGICPPCPTYEKTESRRSSYTG*SLATTH Trigger: GTGGGTCGTGGCTAAAGACAAGCCGGTGTATGACGA...TCTCCGTGACTCGGTTTTCTCATATGTAGGGCAGGGAGGGCAGATCCCGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGGTCAGAGCAAGCTTAGCTGCTAGGCATCTCCCAGCAGAAGGTGGAGAGTTGTTGGTCAGCATGTaGTCCACAGCCTCGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HQVRASLAARHLPAEGGELLVSM*STASIS Trigger: GCTGATCGAGGCTGTGGACAACATGCTGACCAACAA...CTCTCCACCTTCTGCTGGGAGATGCCTAGCAGCTAAGCTTGCTCTGACCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS GCA 90 bp | GTTCTCCAGCTGCTCCTGCATGGCCTTGACCTCAGGGAAGTCCCCTaGAGAAATCTGGTATTCTCGCTGCAGCTGAACATAGATTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLLHGLDLREVP*RNLVFSLQLNIDFR Trigger: CCGGAAATCTATGTTCAGCTGCAGCGAGAATACCAGATTTCTGCAGGGGACTTCCCTGAGGTCAAGGCCATGCAGGAGCAGCTGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTCAGGATGGGGCTGCTCTCGCTTTACCTGGGTCCGAAGGCTCTGGGACTCTTTCGGAATGGCTTTTaGGGATCCACAACTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLRMGLLSLYLGPKALGLFRNGF*GSTTKA Trigger: TGCTTTAGTTGTGGATCCCAAAAAGCCATTCCGAAA...GAGTCCCAGAGCCTTCGGACCCAGGTAAAGCGAGAGCAGCCCCATCCTGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGCTCTTCAGAACTTGGTaGGGCAGCTGTGAGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGITSPWTLTQIQLQPRLFRTW*GSCEHM Trigger: CATGTGCTCACAGCTGCCCAACCAAGTTCTGAAGAG...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGAGTACTTCAGGTGTGTaGATGACCTTGCCCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPGITSPWTLTQIQLQPRSTSGV*MTLPRD Trigger: GTCTCTGGGCAAGGTCATCAACACACCTGAAGTACT...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTTCCAGCGGCAGCACCTaGCGCTGGTACAGAGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CPDFDSLCHTYILLWIIFSSGST*RWYRER Trigger: GCGCTCTCTGTACCAGCGCAAGGTGCTGCCGCTGGA...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGGCATCACCTCTCCATGGACACTGACACAAATACAGTTACAGCCCCGGATCAGGGATGAGATCTaGTTGGTCAGCATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGITSPWTLTQIQLQPRIRDEI*LVSMLS Trigger: GGACAACATGCTGACCAACAAGATCTCATCCCTGAT...CCGGGGCTGTAACTGTATTTGTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGGGATGCTGTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTGGGCCAACCTTGCACGCTaGATGAGGTCATTGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFRDAVQIHSFLLLLVMWANLAR*MRSLSL Trigger: CAAACTCAATGACCTCATCAAGCGTGCAAGGTTGGC...CCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | GACACAAATACAGTTACAGCCCCGGGATCAAACATTCACCTGTGTGTGTCCAATAGGGATGAGATCTTGTaGGTCAGCATGTTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DTNTVTAPGSNIHLCVSNRDEIL*VSMLST Trigger: TGTGGACAACATGCTGACCAACAAGATCTCATCCCT...ATTGGACACACACAGGTGAATGTTTGATCCCGGGGCTGTAACTGTATTTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGGGATGCTGTTCAGATTCATTCATTTCTGCTGCTGTTGGTCATGTGGTTGACACCCGATATCTaGCCATTGATGGGTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFRDAVQIHSFLLLLVMWLTPDI*PLMGDS Trigger: GCTGTCACCCATCAATGGCAAGATATCGGGTGTCAA...CCACATGACCAACAGCAGCAGAAATGAATGAATCTGAACAGCATCCCTGAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGACTTCGACAGCCTGTGTCACACCTACATTCTTCTTTGGATAATTTTTCTGCTGTGTATCCACTaGGTCAGCCTTGTTCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: CPDFDSLCHTYILLWIIFLLCIH*VSLVQY Trigger: GTACTGAACAAGGCTGACCAAGTGGATACACAGCAG...AAAAATTATCCAAAGAAGAATGTAGGTGTGACACAGGCTGTCGAAGTCTGGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS CAA 72 bp | TCCTCCTGGCTGATGAGGCCCATCAGGGATGAGATCTaGTTGGTCAGCATGTTGTCCACAGCCTCGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSWLMRPIRDEI*LVSMLSTASIS Trigger: GCTGATCGAGGCTGTGGACAACATGCTGACCAACAAGATCTCATCCCTGATGGGCCTCATCAGCCAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS TCA 72 bp | GGGTGCTTCCCTCAGTCTCCCCATACATCACAGCAATaGAGGAATCTGTGGTTGGCTCTGGACCAATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GCFPQSPHTSQQ*RNLWLALDQFS Trigger: TGAGAATTGGTCCAGAGCCAACCACAGATTCCTTCATTGCTGTGATGTATGGGGAGACTGAGGGAAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS TCA 72 bp | CTTGGCGTTGACACCCGATATCTTGCCATTGATGGGTaGCAGCGTGTAAAAGAGTTCGTCATACACCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LGVDTRYLAIDG*QRVKEFVIHRL Trigger: AAGCCGGTGTATGACGAACTCTTTTACACGCTGTCACCCATCAATGGCAAGATATCGGGTGTCAACGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS CAA 90 bp | TTCAGGAAAGCATTTCCAAAGCGACTAAGCTTTCGGAATGGCTTTTaGGGATCCACAACTAAAGCATTCCCAGGGGTGCTTCCCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FRKAFPKRLSFRNGF*GSTTKAFPGVLPSV Trigger: GACTGAGGGAAGCACCCCTGGGAATGCTTTAGTTGTGGATCCCAAAAAGCCATTCCGAAAGCTTAGTCGCTTTGGAAATGCTTTCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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| CDS CAA 72 bp | GCATTTCCAAAGCGACTAAGCTTTCGGAATGGCTTTTaGGGATCCACAACTAAAGCATTCCCAGGGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AFPKRLSFRNGF*GSTTKAFPGVL Trigger: AAGCACCCCTGGGAATGCTTTAGTTGTGGATCCCAAAAAGCCATTCCGAAAGCTTAGTCGCTTTGGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028755.8 |
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