Pregenerated sensors for EHD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024065Ensembl transcript IDs: ENSMUST00000024860.9
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAACCTCCCTCCCTCCCTTGCCTGGATGCTTTGGAAGGCTGTGTaGGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGTCACCACGTA | + |
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Preference number: 1 (lower is better) Translates to: VNLPPSLAWMLWKAV*GAVCSDCPVLCHHV Trigger: TACGTGGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATCCAGGCAAGGGAGGGAGGGAGGTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 90 bp | CAGATTGTTGGCCCATCAAAGGCTGGTGAACCTCCCTCCCTCCCTTaGCTGGATGCTTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: QIVGPSKAGEPPSLP*LDALEGCVRGCVFR Trigger: TCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATCCAGGCAAGGGAGGGAGGGAGGTTCACCAGCCTTTGATGGGCCAACAATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 90 bp | TCTAGCAGTCCAGCCCACTCTCCTGATGGCTTGGCTGGTCTTCTGTaGTGTTGTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SSSPAHSPDGLAGLL*CCEHEAQARRHSLL Trigger: AAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCACAACATCACAGAAGACCAGCCAAGCCATCAGGAGAGTGGGCTGGACTGCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 90 bp | CTACAAGGTGACAGATGGTCAGATTGTTGGCCCATCAAAGGCTGGTaGACCTCCCTCCCTCCCTTGCCTGGATGCTTTGGAAGGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LQGDRWSDCWPIKGW*TSLPPLPGCFGRLC Trigger: ACACAGCCTTCCAAAGCATCCAGGCAAGGGAGGGAGGGAGGTTCACCAGCCTTTGATGGGCCAACAATCTGACCATCTGTCACCTTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 90 bp | ACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCTACTaGAACAGTGGGCATAGGGCAAGCCAGGGGGAGACCACAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TCFVFHHSRSVAESY*NSGHRASQGETTEE Trigger: CTCCTCTGTGGTCTCCCCCTGGCTTGCCCTATGCCCACTGTTGCAGTAGCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CCA 90 bp | GGGGGTAGAGTGGGTGGGCCATCTGTGTTAACTGCCTCATGTCTGTaGGGGAATGGAAGATGGAGGGAATGTTTGGACACAGGCCTATAT | + |
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Preference number: 1 (lower is better) Translates to: GGRVGGPSVLTASCL*GNGRWRECLDTGLY Trigger: ATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATGAGGCAGTTAACACAGATGGCCCACCCACTCTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 90 bp | ATCCATCACAGAACTGGGACAGAGGGGTGTCTCAAGTTCTGGATTTaGATCTTCTCTTCTTGGGACTTCCCGGAGTTTGGGAAGGTACCC | + |
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Preference number: 1 (lower is better) Translates to: IHHRTGTEGCLKFWI*IFSSWDFPEFGKVP Trigger: GGGTACCTTCCCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATCCAGAACTTGAGACACCCCTCTGTCCCAGTTCTGTGATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 90 bp | AATGTTTGGACACAGGCCTATATCCTAAGACAGAGGAGGGAAAGCTaGCCTTCTACCAACCCTGGGAACTTGGAGAGGTGCTCAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: NVWTQAYILRQRRES*PSTNPGNLERCSDK Trigger: TTTGTCTGAGCACCTCTCCAAGTTCCCAGGGTTGGTAGAAGGGCAGCTTTCCCTCCTCTGTCTTAGGATATAGGCCTGTGTCCAAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 90 bp | TTCTGTGATGTTGTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTaGTTCTACAAGGTGACAGATGGTCAGATTGTTGGCCCATCAAAG | + |
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Preference number: 1 (lower is better) Translates to: FCDVVNTRRRPEGTV*FYKVTDGQIVGPSK Trigger: CTTTGATGGGCCAACAATCTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCACAACATCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 90 bp | AACACAGAGAACATAGGCCAGTGTCTTTTCAAGTGTGGGGTGCAGTaGCCTATGGAGGTTTCTCAGATTGGTCCTCCTCTTTCAGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: NTENIGQCLFKCGVQ*PMEVSQIGPPLSAS Trigger: AGAAGCTGAAAGAGGAGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGGCCTATGTTCTCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 90 bp | CCCTTCTACCAACCCTGGGAACTTGGAGAGGTGCTCAGACAAAGGTaGACCCTTCTCATTTATAGTGTGACTGTCAAGTTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PFYQPWELGEVLRQR*TLLIYSVTVKLCVC Trigger: ACACACACACAACTTGACAGTCACACTATAAATGAGAAGGGTTCACCTTTGTCTGAGCACCTCTCCAAGTTCCCAGGGTTGGTAGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 90 bp | AAAAATGCAGTAACAGGAGGGAAGCAAACTTGCCTAGGGCATTCATaGAGGCCACAGGGACTAATACATAGAAAGTGCCTAACCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: KNAVTGGKQTCLGHS*RPQGLIHRKCLTLL Trigger: GAGCAGGGTTAGGCACTTTCTATGTATTAGTCCCTGTGGCCTTCATGAATGCCCTAGGCAAGTTTGCTTCCCTCCTGTTACTGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CCA 90 bp | CAAGTTCTGGATTTGAATCTTCTCTTCTTGGGACTTCCCGGAGTTTaGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTG | + |
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Preference number: 1 (lower is better) Translates to: QVLDLNLLFLGLPGV*EGTLNYSESLALHL Trigger: CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATCCAGAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | CCATCAAAGGCTGGTGAACCTCCCTCCCTCCCTTGCCTGGATGCTTaGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSKAGEPPSLPCLDA*EGCVRGCVFRLSCA Trigger: AGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATCCAGGCAAGGGAGGGAGGGAGGTTCACCAGCCTTTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR GCA 90 bp | ACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTCAGCAGAGGAGGGAAAGCTaGCCTTCTACCAACCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TRRRPEGTVCFYKVTDGQQRRES*PSTNPG Trigger: CCCAGGGTTGGTAGAAGGGCAGCTTTCCCTCCTCTG...CTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTCAGACTGCCTCATGTCTGTaGGGGAATGGAAGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TRRRPEGTVCFYKVTDGQTASCL*GNGRWR Trigger: CCTCCATCTTCCATTCCCCCACAGACATGAGGCAGT...CTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | GTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATaGGTCCTCCTCTTTCAGCTTCTCCTTTCCCTCACAGCTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VFSSVGCSALWRFLR*VLLFQLLLSLTAPR Trigger: CCTGGGAGCTGTGAGGGAAAGGAGAAGCTGAAAGAGGAGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR TCA 90 bp | GATGCTTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGACAGCTCCCAGGCCCTaGGTCAATTTCTACTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: DALEGCVRGCVFRLSCALTAPRP*VNFYLG Trigger: TCCTAAGTAGAAATTGACTCAGGGCCTGGGAGCTGT...CAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTCAGGGAGGTTTCTCAGATTaGTCCTCCTCTTTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TRRRPEGTVCFYKVTDGQGGFSD*SSSFSF Trigger: GAAGCTGAAAGAGGAGGACCAATCTGAGAAACCTCC...CTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGTCACCGTGTCTTTTCAAGTGTaGGGTGCAGTGCCCTATGGA | + |
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Preference number: 2 (lower is better) Translates to: FGRLCEGLCVQTVLCFVTVSFQV*GAVPYG Trigger: TCCATAGGGCACTGCACCCCACACTTGAAAAGACAC...GGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | TTAACTGCCTCATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTaGGACACAGGCCTATATCCTAAGACAGAGGAGGGAAAGCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LTASCLWGNGRWREC*DTGLYPKTEEGKLP Trigger: GGGCAGCTTTCCCTCCTCTGTCTTAGGATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATGAGGCAGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | TTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTaGTCACCACGTAGCAACACTGGGATCTTTCATCCATCACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LEGCVRGCVFRLSCA*SPRSNTGIFHPSQN Trigger: GTTCTGTGATGGATGAAAGATCCCAGTGTTGCTACGTGGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTTGTCACCACGTAGCAACACTGGGATCTTTCATCCATCACAGAACTGGGAAGTGTGGGGTGCAGTaGCCTATGGAGGTTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VLCHHVATLGSFIHHRTGKCGVQ*PMEVSQ Trigger: CTGAGAAACCTCCATAGGGCACTGCACCCCACACTT...CCCAGTTCTGTGATGGATGAAAGATCCCAGTGTTGCTACGTGGTGACAAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | CTAAGACAGAGGAGGGAAAGCTGCCCTTCTACCAACCCTGGGAACTaGGAGAGGTGCTCAGACAAAGGTGAACCCTTCTCATTTATAGTG | + |
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Preference number: 2 (lower is better) Translates to: LRQRRESCPSTNPGN*ERCSDKGEPFSFIV Trigger: CACTATAAATGAGAAGGGTTCACCTTTGTCTGAGCACCTCTCCAAGTTCCCAGGGTTGGTAGAAGGGCAGCTTTCCCTCCTCTGTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CAA 90 bp | CATCCATCACAGAACTGGGACAGAGGGGTGTCTCAAGTTCTGGATTaGAATCTTCTCTTCTTGGGACTTCCCGGAGTTTGGGAAGGTACC | + |
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Preference number: 2 (lower is better) Translates to: HPSQNWDRGVSQVLD*NLLFLGLPGVWEGT Trigger: GGTACCTTCCCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATCCAGAACTTGAGACACCCCTCTGTCCCAGTTCTGTGATGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGTCACCATGTCTGTGGGGGAATaGAAGATGGAGGGAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: FGRLCEGLCVQTVLCFVTMSVGE*KMEGMF Trigger: AAACATTCCCTCCATCTTCCATTCCCCCACAGACAT...GGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR GCA 90 bp | AACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTTCTTCACCTGAAAAATaGAGTAACAGGAGGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: NTRRRPEGTVCFYKVTDGSSPEK*SNRREA Trigger: TGCTTCCCTCCTGTTACTGCATTTTTCAGGTGAAGA...ACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGGTGCTCAGACAAAGGTaGACCCTTCTCATTTATAGT | + |
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Preference number: 2 (lower is better) Translates to: PVSFQVWGAVPYGGFSDWVLRQR*TLLIYS Trigger: ACTATAAATGAGAAGGGTTCACCTTTGTCTGAGCAC...CCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | GAACCACCAATCCAATGTCCTGTTGAAGAAGACCACAGGGTATCTTCCTTGTGCGTGTGTGTGTGTGTGTaGTCTACATGTCTATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EPPIQCPVEEDHRVSSLCVCVCV*STCLSS Trigger: AGAGGATAGACATGTAGACCACACACACACACACAC...GCACAAGGAAGATACCCTGTGGTCTTCTTCAACAGGACATTGGATTGGTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR GCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCCCTCCCTTGCCTGGATaGTTTGGAAGGCTGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KISYTCFVFHHSRSVAESPPLPG*FGRLCE Trigger: CTCACACAGCCTTCCAAAGCATCCAGGCAAGGGAGG...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR GCA 90 bp | ATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCTACATTAGCATGAAGTCCTaGTTTGTAAAAGCCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ISYTCFVFHHSRSVAESYISMKS*FVKAWG Trigger: GCCCCAGGCTTTTACAAAGCAGGACTTCATGCTAAT...GTAGCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCGATGGAGGGAATGTTTaGACACAGGCCTATATCCTA | + |
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Preference number: 2 (lower is better) Translates to: KISYTCFVFHHSRSVAESDGGNV*TQAYIL Trigger: TAGGATATAGGCCTGTGTCCAAACATTCCCTCCATC...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 72 bp | CCAGCCCACTCTCCTGATGGCTTGGCTGGTCTTCTGTaGTGTTGTGAACACGAGGCGCAGGCCAGAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: PAHSPDGLAGLL*CCEHEAQARRH Trigger: GTGCCTTCTGGCCTGCGCCTCGTGTTCACAACATCACAGAAGACCAGCCAAGCCATCAGGAGAGTGGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 72 bp | GACAGATGGTCAGATTGTTGGCCCATCAAAGGCTGGTaGACCTCCCTCCCTCCCTTGCCTGGATGCTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: DRWSDCWPIKGW*TSLPPLPGCFG Trigger: TCCAAAGCATCCAGGCAAGGGAGGGAGGGAGGTTCACCAGCCTTTGATGGGCCAACAATCTGACCATCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 72 bp | GTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCTACTaGAACAGTGGGCATAGGGCAAGCCAGGGGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: VFHHSRSVAESY*NSGHRASQGET Trigger: GGTCTCCCCCTGGCTTGCCCTATGCCCACTGTTGCAGTAGCTCTCTGCTACACTCCTACTGTGATGGAAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CAA 90 bp | GTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATTGCCTAACCCTGCTCTaGCCACACAGGAATGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: VNTRRRPEGTVCFYKVTDCLTLL*PHRNGL Trigger: CAAGCCATTCCTGTGTGGCAAGAGCAGGGTTAGGCA...ATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR TCA 72 bp | GGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTaGCAGATGGTCAGATTGTTGGCCCATCAAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GAGQKAQFASTR*QMVRLLAHQRL Trigger: CAGCCTTTGATGGGCCAACAATCTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 72 bp | ACACAGGCCTATATCCTAAGACAGAGGAGGGAAAGCTaGCCTTCTACCAACCCTGGGAACTTGGAGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: TQAYILRQRRES*PSTNPGNLERC Trigger: GCACCTCTCCAAGTTCCCAGGGTTGGTAGAAGGGCAGCTTTCCCTCCTCTGTCTTAGGATATAGGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 72 bp | GTTGTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTaGTTCTACAAGGTGACAGATGGTCAGATTGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: VVNTRRRPEGTV*FYKVTDGQIVG Trigger: GCCAACAATCTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CCA 72 bp | GTGGGTGGGCCATCTGTGTTAACTGCCTCATGTCTGTaGGGGAATGGAAGATGGAGGGAATGTTTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: VGGPSVLTASCL*GNGRWRECLDT Trigger: TGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATGAGGCAGTTAACACAGATGGCCCACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CAA 90 bp | CCCGGAGTTTGGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGCCTGTTTGTGAGTCTTaGACCCAAAGTGGCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PGVWEGTLNYSESLALHLPVCES*TQSGRQ Trigger: CTGCCTGCCACTTTGGGTCAAAGACTCACAAACAGG...CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAGCTACTGCAACAGTGGGCATAGGGCAAGCCAGGGGGAGACCACAGAGGAGTCTCAAGTTCTGGATTaGAATCTTCTCTTCTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ESYCNSGHRASQGETTEESQVLD*NLLFLG Trigger: TCCCAAGAAGAGAAGATTCAAATCCAGAACTTGAGA...CTCCTCTGTGGTCTCCCCCTGGCTTGCCCTATGCCCACTGTTGCAGTAGCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CCA 72 bp | GCCAGTGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATaGAGGTTTCTCAGATTGGTCCTCCTCTTTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ASVFSSVGCSAL*RFLRLVLLFQL Trigger: AAGCTGAAAGAGGAGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 72 bp | AGCTGCCCTTCTACCAACCCTGGGAACTTGGAGAGGTaGTCAGACAAAGGTGAACCCTTCTCATTTATAGTG | + |
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Preference number: 3 (lower is better) Translates to: SCPSTNPGNLER*SDKGEPFSFIV Trigger: CACTATAAATGAGAAGGGTTCACCTTTGTCTGAGCACCTCTCCAAGTTCCCAGGGTTGGTAGAAGGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR GCA 72 bp | AACATAGGCCAGTGTCTTTTCAAGTGTGGGGTGCAGTaGCCTATGGAGGTTTCTCAGATTGGTCCTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: NIGQCLFKCGVQ*PMEVSQIGPPL Trigger: AAGAGGAGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGGCCTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR CCA 72 bp | CATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTTaGACACAGGCCTATATCCTAAGACAGAGGAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: HVCGGMEDGGNV*TQAYILRQRRE Trigger: TTCCCTCCTCTGTCTTAGGATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGACACAGGCCTATATCCTAAGACAGAGGAGGGAAAGCTGCCCTTCTACCAAAGTGTGACTGTCAAGTaGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LDTGLYPKTEEGKLPFYQSVTVK*CVCVCV Trigger: CACACACACACACACACACAACTTGACAGTCACACT...TTGGTAGAAGGGCAGCTTTCCCTCCTCTGTCTTAGGATATAGGCCTGTGTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| 3UTR-3UTR CAA 90 bp | GATGCTTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGACAGAGAGTCTTGGGTaGAGAAAAACACAGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: DALEGCVRGCVFRLSCALTESLG*RKTQRT Trigger: TGTTCTCTGTGTTTTTCTCAACCCAAGACTCTCTGT...CAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCGGAGTTTGGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGCAATCCAATGTCCTGTaGAAGAAGACCACAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PGVWEGTLNYSESLALHLQSNVL*KKTTGY Trigger: ATACCCTGTGGTCTTCTTCAACAGGACATTGGATTG...CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CCA 72 bp | GTGTTAACTGCCTCATGTCTGTGGGGGAATGGAAGATaGAGGGAATGTTTGGACACAGGCCTATATCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLTASCLWGNGR*RECLDTGLYPK Trigger: CTTAGGATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATGAGGCAGTTAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CCA 72 bp | AAACACAGAGAACATAGGCCAGTGTCTTTTCAAGTGTaGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: KHREHRPVSFQV*GAVPYGGFSDW Trigger: CCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGGCCTATGTTCTCTGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR-3UTR CAA 90 bp | AAATGCAGTAACAGGAGGGAAGCAAACTTGCCTAGGGCATTCATGAAGGCCACAAGATGGAGGGAATGTTaGGACACAGGCCTATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KCSNRREANLPRAFMKATRWREC*DTGLYP Trigger: AGGATATAGGCCTGTGTCCAAACATTCCCTCCATCT...TGTGGCCTTCATGAATGCCCTAGGCAAGTTTGCTTCCCTCCTGTTACTGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR TCA 72 bp | GTAACAGGAGGGAAGCAAACTTGCCTAGGGCATTCATaGAGGCCACAGGGACTAATACATAGAAAGTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VTGGKQTCLGHS*RPQGLIHRKCL Trigger: TAGGCACTTTCTATGTATTAGTCCCTGTGGCCTTCATGAATGCCCTAGGCAAGTTTGCTTCCCTCCTGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CCA 72 bp | CGTAGCAACACTGGGATCTTTCATCCATCACAGAACTaGGACAGAGGGGTGTCTCAAGTTCTGGATTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSNTGIFHPSQN*DRGVSQVLDLN Trigger: ATTCAAATCCAGAACTTGAGACACCCCTCTGTCCCAGTTCTGTGATGGATGAAAGATCCCAGTGTTGCTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR TCA 72 bp | ACTTCCCGGAGTTTGGGAAGGTACCCTAAACTACTCTaGGTCTTTGGCTCTTCACCTGAAAAATGCAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TSRSLGRYPKLL*VFGSSPEKCSN Trigger: GTTACTGCATTTTTCAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR TCA 72 bp | AGAACAAGGTCCCAGTCCTTTCAAGATGGCCTTCTGTaGATTAGCATGAAGTCCTGCTTTGTAAAAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RTRSQSFQDGLL*ISMKSCFVKAW Trigger: CCAGGCTTTTACAAAGCAGGACTTCATGCTAATTCACAGAAGGCCATCTTGAAAGGACTGGGACCTTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CCA 72 bp | GATTTGAATCTTCTCTTCTTGGGACTTCCCGGAGTTTaGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DLNLLFLGLPGV*EGTLNYSESLA Trigger: AGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CCA 72 bp | TCAAGGTCCATGTTTACTGAGGAAGACAGAGAGTCTTaGGTTGAGAAAAACACAGAGAACATAGGCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRSMFTEEDRES*VEKNTENIGQC Trigger: ACACTGGCCTATGTTCTCTGTGTTTTTCTCAACCCAAGACTCTCTGTCTTCCTCAGTAAACATGGACCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTCAGCTGAAGTCCTGGGCCTaGAGCTGGTCCTGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRRPEGTVCFYKVTDGQLKSWA*SWSCIL Trigger: GAGGATGCAGGACCAGCTGCAGGCCCAGGACTTCAG...CTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | AACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTGGCGCACCAGCACCATaGGCTGGGCAATGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTRRRPEGTVCFYKVTDGGAPAP*AGQCHE Trigger: CTCATGACATTGCCCAGCTCATGGTGCTGGTGCGCC...ACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGCTACTGCAACAGTGGGCATAGGGCAAGCCAGGGGGAGACCACAGAGGAGCCTCGTCATCCAACATaGCATCCTTGTCAATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESYCNSGHRASQGETTEEPRHPT*HPCQCR Trigger: CCGACATTGACAAGGATGGCATGTTGGATGACGAGG...CTCCTCTGTGGTCTCCCCCTGGCTTGCCCTATGCCCACTGTTGCAGTAGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | GTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATTGCCCAGCACGCTGTTaGGCAACTTGGAGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VNTRRRPEGTVCFYKVTDCPARC*ATWSAP Trigger: TGGTGCGCTCCAAGTTGCCCAACAGCGTGCTGGGCA...ATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | CATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTTGGACACAGGCCTATATCGATGGAGGGAGGAGGTaGGCAGGTAGCTCACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVCGGMEDGGNVWTQAYIDGGRR*AGSSLG Trigger: GCCCAGTGAGCTACCTGCCCACCTCCTCCCTCCATC...GATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGAGTTTGGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGAGGCATTCCCGGGAATaGTCCCCTCCACATCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGVWEGTLNYSESLALHLRHSRE*SPPHLP Trigger: AGGGAGATGTGGAGGGGATCATTCCCGGGAATGCCT...CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGTCACCAATCATACCCTCGGCTaGTCCTCTGCTTCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FGRLCEGLCVQTVLCFVTNHTLG*SSASPQ Trigger: CTGGGGAGAAGCAGAGGATCAGCCGAGGGTATGATT...GGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR GCA 90 bp | CATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTTGGACACAGGCCTATATCACTCGGCATCATCGATaGCCTCCCCAGCTCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVCGGMEDGGNVWTQAYITRHHR*PPQLPL Trigger: GAGAGGGAGCTGGGGAGGGCATCGATGATGCCGAGT...GATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGAGCATCCTCTTCAGGTTaGGGAAGTCTCCAGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CEHEAQARRHSLLLQGDRASSSG*GSLQGR Trigger: TCTCCCCTGGAGACTTCCCCAACCTGAAGAGGATGC...TCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCCTTCCTGGGCCTGCAGCTaGTCCTGCATCCTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFKCGVQCPMEVSQIGPSWACS*SCILFR Trigger: CCTGAAGAGGATGCAGGACCAGCTGCAGGCCCAGGA...AGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | CATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTTGGACACAGGCCTATATCCGTTGGGTCTCTTCCTaGCGCACCAGCACCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVCGGMEDGGNVWTQAYIRWVSS*RTSTMS Trigger: GCTCATGGTGCTGGTGCGCCAGGAAGAGACCCAACG...GATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCCTATCTGGACAGGCCGTTaGGTCTCTTCCTGGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CLFKCGVQCPMEVSQIGPIWTGR*VSSWRT Trigger: GGTGCGCCAGGAAGAGACCCAACGGCCTGTCCAGAT...AGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTTTGTCACCACGTAGCAACACTGGGATCTTTCATCCATCACAGAACTGGGCCGCCCTTCACCATCTaGACAGGCCGTTGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCHHVATLGSFIHHRTGPPFTI*TGRWVS Trigger: AGAGACCCAACGGCCTGTCCAGATGGTGAAGGGCGG...CCCAGTTCTGTGATGGATGAAAGATCCCAGTGTTGCTACGTGGTGACAAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCCTACGGCGTTGGGCAGCTaGGCACACACAAACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLFKCGVQCPMEVSQIGPTALGS*AHTNLF Trigger: GAACAGGTTTGTGTGTGCCCAGCTGCCCAACGCCGT...AGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCTCCAGGGGAGATCTaGTGTTCTCGCTCAATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVSFQVWGAVPYGGFSDWSPGEI*CSRSIR Trigger: CCGGATTGAGCGAGAACACCAGATCTCCCCTGGAGA...CCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | TGTGAACACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGAAGCTGGGCAATGTCATaGGCCAGCATATCATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: CEHEAQARRHSLLLQGDRSWAMS*ASISST Trigger: GGTTGATGATATGCTGGCTCATGACATTGCCCAGCT...TCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGTGTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | TGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTaGTCACCACGTAGCAACACTGGGATCTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVRGCVFRLSCA*SPRSNTGIFHP Trigger: TGGATGAAAGATCCCAGTGTTGCTACGTGGTGACAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | GATGCTTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGTCTGAAGGGTTTCTTTaGATCCACCACCAAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DALEGCVRGCVFRLSCALSEGFL*IHHQGI Trigger: AATGCCTTGGTGGTGGATCCAAAGAAACCCTTCAGA...CAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | CAGAACTGGGACAGAGGGGTGTCTCAAGTTCTGGATTaGAATCTTCTCTTCTTGGGACTTCCCGGAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNWDRGVSQVLD*NLLFLGLPGVW Trigger: CCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATCCAGAACTTGAGACACCCCTCTGTCCCAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | CCCGGAGTTTGGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGTTACGGGGTAGACTCTaGATGTCTCTGAACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGVWEGTLNYSESLALHLLRGRL*MSLNKS Trigger: AGACTTGTTCAGAGACATTCAGAGTCTACCCCGTAA...CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | GGGGACAAACCCATGAACCACCAATCCAATGTCCTGTaGAAGAAGACCACAGGGTATCTTCCTTGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDKPMNHQSNVL*KKTTGYLPCAF Trigger: GAAAGCACAAGGAAGATACCCTGTGGTCTTCTTCAACAGGACATTGGATTGGTGGTTCATGGGTTTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | GGGGTGTCTCAAGTTCTGGATTTGAATCTTCTCTTCTaGGGACTTCCCGGAGTTTGGGAAGGTACCCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSQVLDLNLLF*GLPGVWEGTLN Trigger: GTTTAGGGTACCTTCCCAAACTCCGGGAAGTCCCAAGAAGAGAAGATTCAAATCCAGAACTTGAGACACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGAGTTTGGGAAGGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGCCAGTTCTTTCTTTTTaGTGTCCTTCCCAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVWEGTLNYSESLALHLPVLSF*CPSQTL Trigger: CAGTGTTTGGGAAGGACACCAAAAAGAAAGAACTGG...CAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACCTTCCCAAACTCCGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCTACATGTCTATCCTCTCTTTGACTTTGATAAGGTaGTTGGCCAGGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVVYMSILSLTLIR*LARANS Trigger: GGAGTTTGCCCTGGCCAACCACCTTATCAAAGTCAA...AGAGAGGATAGACATGTAGACCACACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCTGGCGTTGGCACCTGTaGTCTTGCCATCCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KISYTCFVFHHSRSVAESWRWHL*SCHPLG Trigger: CCCCAGTGGATGGCAAGATCACAGGTGCCAACGCCA...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR GCA 90 bp | GAACCACCAATCCAATGTCCTGTTGAAGAAGACCACAGGGTATCTTCCTTGTGCATCTCCCTGCATCACTaGTATGAAGGAATCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPPIQCPVEEDHRVSSLCISLHH*YEGISG Trigger: ACCACTGATTCCTTCATAGCAGTGATGCAGGGAGAT...GCACAAGGAAGATACCCTGTGGTCTTCTTCAACAGGACATTGGATTGGTGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | TCACCTGAAAAATGCAGTAACAGGAGGGAAGCAAACTaGCCTAGGGCATTCATGAAGGCCACAGGGACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPEKCSNRREAN*PRAFMKATGTN Trigger: ATTAGTCCCTGTGGCCTTCATGAATGCCCTAGGCAAGTTTGCTTCCCTCCTGTTACTGCATTTTTCAGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCGTGGCTGGAATTTGCTaGAGTCCTGGGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KISYTCFVFHHSRSVAESVAGIC*SPGPAA Trigger: AGCTGCAGGCCCAGGACTTCAGCAAATTCCAGCCAC...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | GGTACCCTAAACTACTCTGAGTCTTTGGCTCTTCACCTGAAAAATGCAGTAACATGCTGGGTCTCGATCTaGTCAGCTTTGTTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GTLNYSESLALHLKNAVTCWVSI*SALFNT Trigger: AGTGTTGAACAAAGCTGACCAGATCGAGACCCAGCA...TGTTACTGCATTTTTCAGGTGAAGAGCCAAAGACTCAGAGTAGTTTAGGGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | AAGTGCCTAACCCTGCTCTTGCCACACAGGAATGGCTaGGTATGTATAAAGAAACTGAGTATCCAGAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: KCLTLLLPHRNG*VCIKKLSIQRY Trigger: GTATCTCTGGATACTCAGTTTCTTTATACATACCAAGCCATTCCTGTGTGGCAAGAGCAGGGTTAGGCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR TCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCCCTGCATCACTGCTATaGAGGAATCAGTGGTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KISYTCFVFHHSRSVAESPASLL*RNQWSA Trigger: AGCCGACCACTGATTCCTTCATAGCAGTGATGCAGG...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCTACTTTCCTCTTAGATaGAGGGAGGAGGTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KISYTCFVFHHSRSVAESYFPLR*REEVGR Trigger: CCTGCCCACCTCCTCCCTCCATCTAAGAGGAAAGTA...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| 3UTR CAA 72 bp | CAGGGACTAATACATAGAAAGTGCCTAACCCTGCTCTaGCCACACAGGAATGGCTTGGTATGTATAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGLIHRKCLTLL*PHRNGLVCIKK Trigger: TTTCTTTATACATACCAAGCCATTCCTGTGTGGCAAGAGCAGGGTTAGGCACTTTCTATGTATTAGTCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR GCA 90 bp | AAAATAAGTTATACTTGCTTTGTTTTCCATCACAGTAGGAGTGTAGCAGAGAGCCCCTCCACATCTCCCTaGATCACTGCTATGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KISYTCFVFHHSRSVAESPSTSP*ITAMKE Trigger: TTCCTTCATAGCAGTGATGCAGGGAGATGTGGAGGG...GCTCTCTGCTACACTCCTACTGTGATGGAAAACAAAGCAAGTATAACTTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS CCA 90 bp | AAGGGGCCTTGTAAGGTTCCCTCAAATGCTCCGCCCTTCACCATCTaGACAGGCCGTTGGGTCTCTTCCTGGCGCACCAGCACCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGPCKVPSNAPPFTI*TGRWVSSWRTSTMS Trigger: GCTCATGGTGCTGGTGCGCCAGGAAGAGACCCAACGGCCTGTCCAGATGGTGAAGGGCGGAGCATTTGAGGGAACCTTACAAGGCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS TCA 90 bp | CCATCTGGACAGGCCGTTGGGTCTCTTCCTGGCGCACCAGCACCATaGGCTGGGCAATGTCATGAGCCAGCATATCATCAACCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGQAVGSLPGAPAP*AGQCHEPAYHQPLP Trigger: TGGAAGTGGTTGATGATATGCTGGCTCATGACATTGCCCAGCTCATGGTGCTGGTGCGCCAGGAAGAGACCCAACGGCCTGTCCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGCTACTGCAACAGTGGGCATAGGGCAAGCCAGGGGGAGACCACAGAGGAGAGGACCATGGGCTTGTaGTCGAAATCAGCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESYCNSGHRASQGETTEERTMGL*SKSASS Trigger: GGAAGATGCTGATTTCGACAACAAGCCCATGGTCCT...CTCCTCTGTGGTCTCCCCCTGGCTTGCCCTATGCCCACTGTTGCAGTAGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
||
| CDS-3UTR CAA 90 bp | TTGGACACAGGCCTATATCCTAAGACAGAGGAGGGAAAGCTGCCCTTCTACCAATTGCCCAGCACGCTGTaGGGCAACTTGGAGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: LDTGLYPKTEEGKLPFYQLPSTL*GNLERT Trigger: GGTGCGCTCCAAGTTGCCCAACAGCGTGCTGGGCAA...TTGGTAGAAGGGCAGCTTTCCCTCCTCTGTCTTAGGATATAGGCCTGTGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | CCAGTGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCATCATACATAGGCTaGTCCCGCGCCACCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PVSFQVWGAVPYGGFSDWSSYIG*SRATTH Trigger: GTGGGTGGTGGCGCGGGACAAGCCTATGTATGATGA...CCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | GATGCTTTGGAAGGCTGTGTGAGGGGCTGTGTGTTCAGACTGTCCTGTGCTTTGACCACTTCCAGCAGCTaGCTCTTCAGTGGCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DALEGCVRGCVFRLSCALTTSSS*LFSGWN Trigger: ATTCCAGCCACTGAAGAGCAAGCTGCTGGAAGTGGT...CAAAGCACAGGACAGTCTGAACACACAGCCCCTCACACAGCCTTCCAAAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | GAACCACCAATCCAATGTCCTGTTGAAGAAGACCACAGGGTATCTTCCTTGTGCTGCATCCTCTTCAGGTaGGGGAAGTCTCCAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: EPPIQCPVEEDHRVSSLCCILFR*GKSPGE Trigger: CTCCCCTGGAGACTTCCCCAACCTGAAGAGGATGCA...GCACAAGGAAGATACCCTGTGGTCTTCTTCAACAGGACATTGGATTGGTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | ACGAGGCGCAGGCCAGAAGGCACAGTTTGCTTCTACAAGGTGACAGATGGTCAGGTCTCTGAACAAGTCTaGCTCTTCAGCTTCAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TRRRPEGTVCFYKVTDGQVSEQV*LFSFKE Trigger: CTCTTTGAAGCTGAAGAGCAAGACTTGTTCAGAGAC...CTGACCATCTGTCACCTTGTAGAAGCAAACTGTGCCTTCTGGCCTGCGCCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | GAACCACCAATCCAATGTCCTGTTGAAGAAGACCACAGGGTATCTTCCTTGTGCTTGGCACCTGTGATCTaGCCATCCACTGGGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: EPPIQCPVEEDHRVSSLCLAPVI*PSTGDK Trigger: CTTATCCCCAGTGGATGGCAAGATCACAGGTGCCAA...GCACAAGGAAGATACCCTGTGGTCTTCTTCAACAGGACATTGGATTGGTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | CATGTCTGTGGGGGAATGGAAGATGGAGGGAATGTTTGGACACAGGCCTATATCTCCAACATGCCATCCTaGTCAATGTCGGCTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HVCGGMEDGGNVWTQAYISNMPS*SMSASF Trigger: GAAGCTAGCCGACATTGACAAGGATGGCATGTTGGA...GATATAGGCCTGTGTCCAAACATTCCCTCCATCTTCCATTCCCCCACAGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTTTCAAGTGTGGGGTGCAGTGCCCTATGGAGGTTTCTCAGATTGGTCCTTCATGCCCCTCTAGCTaGACTTTGATAAGGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: CLFKCGVQCPMEVSQIGPSCPSS*TLIRWL Trigger: CAACCACCTTATCAAAGTCAAGCTAGAGGGGCATGA...AGGACCAATCTGAGAAACCTCCATAGGGCACTGCACCCCACACTTGAAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | GCAACACTGGGATCTTTCATCCATCACAGAACTGGGACAGAGGGGTGTCTCAAGACCAGTTCTTTCTTTTaGGTGTCCTTCCCAAACACT | + |
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Preference number: 5 (lower is better) Translates to: ATLGSFIHHRTGTEGCLKTSSFF*VSFPNT Trigger: AGTGTTTGGGAAGGACACCAAAAAGAAAGAACTGGT...CTTGAGACACCCCTCTGTCCCAGTTCTGTGATGGATGAAAGATCCCAGTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS-3UTR CAA 90 bp | AACACTGGGATCTTTCATCCATCACAGAACTGGGACAGAGGGGTGTCTCAAGTTTGGTTCTTGAGAGCCTaGATGACTTCTGAGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: NTGIFHPSQNWDRGVSQVWFLRA*MTSENS Trigger: TGAGTTCTCAGAAGTCATCAAGGCTCTCAAGAACCA...AACTTGAGACACCCCTCTGTCCCAGTTCTGTGATGGATGAAAGATCCCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS GCA 72 bp | GCTTGTCCCGCGCCACCACCCACTCGGCATCATCGATaGCCTCCCCAGCTCCCTCTCCATAGCCGTGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: ACPAPPPTRHHR*PPQLPLHSRAR Trigger: TCGGGCACGGCTATGGAGAGGGAGCTGGGGAGGGCATCGATGATGCCGAGTGGGTGGTGGCGCGGGACAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS CAA 72 bp | CTCAAATGCTCCGCCCTTCACCATCTGGACAGGCCGTaGGGTCTCTTCCTGGCGCACCAGCACCATGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKCSALHHLDRP*GLFLAHQHHEL Trigger: CAGCTCATGGTGCTGGTGCGCCAGGAAGAGACCCAACGGCCTGTCCAGATGGTGAAGGGCGGAGCATTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS CCA 72 bp | TGTAAGGTTCCCTCAAATGCTCCGCCCTTCACCATCTaGACAGGCCGTTGGGTCTCTTCCTGGCGCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: CKVPSNAPPFTI*TGRWVSSWRTS Trigger: GCTGGTGCGCCAGGAAGAGACCCAACGGCCTGTCCAGATGGTGAAGGGCGGAGCATTTGAGGGAACCTTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS TCA 72 bp | CAGGCCGTTGGGTCTCTTCCTGGCGCACCAGCACCATaGGCTGGGCAATGTCATGAGCCAGCATATCATCAA | + |
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Preference number: 6 (lower is better) Translates to: QAVGSLPGAPAP*AGQCHEPAYHQ Trigger: TTGATGATATGCTGGCTCATGACATTGCCCAGCTCATGGTGCTGGTGCGCCAGGAAGAGACCCAACGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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| CDS TCA 72 bp | TTGAGCTTTCGAAGAGCAGCATTACGGGGTAGACTCTaGATGTCTCTGAACAAGTCTTGCTCTTCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSFRRAALRGRL*MSLNKSCSSAS Trigger: TGAAGCTGAAGAGCAAGACTTGTTCAGAGACATTCAGAGTCTACCCCGTAATGCTGCTCTTCGAAAGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024860.9 |
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