Pregenerated sensors for EHD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074364Ensembl transcript IDs: ENSMUST00000098799.5, ENSMUST00000144956.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTTTCCACCAGAGGGCGCCCAGGGCTGCGGAGCAGGGCGTGCGTaGGCGGGAGATTCTCCAGGCCAAAGTGTCTCGGGCGCACCGGGT | + |
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Preference number: 1 (lower is better) Translates to: TFPPEGAQGCGAGRA*AGDSPGQSVSGAPG Trigger: ACCCGGTGCGCCCGAGACACTTTGGCCTGGAGAATCTCCCGCCCACGCACGCCCTGCTCCGCAGCCCTGGGCGCCCTCTGGTGGAAAGGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 90 bp | CACTACCTTTCCACCAGAGGGCGCCCAGGGCTGCGGAGCAGGGCGTaGGTGGGCGGGAGATTCTCCAGGCCAAAGTGTCTCGGGCGCACC | + |
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Preference number: 1 (lower is better) Translates to: HYLSTRGRPGLRSRA*VGGRFSRPKCLGRT Trigger: GGTGCGCCCGAGACACTTTGGCCTGGAGAATCTCCCGCCCACGCACGCCCTGCTCCGCAGCCCTGGGCGCCCTCTGGTGGAAAGGTAGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR CCA 90 bp | GGGCCAGAGCAGGGATCCGCGTGTAGCCGTGTAGCCAACTGGAGCTaGGGAGGAGCCACAGCAGGGCAAAGAGGGAGGATGAGCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GPEQGSACSRVANWS*GGATAGQRGRMSQQ Trigger: CTGCTGGCTCATCCTCCCTCTTTGCCCTGCTGTGGCTCCTCCCCAGCTCCAGTTGGCTACACGGCTACACGCGGATCCCTGCTCTGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR CCA 90 bp | GTGAGTGGGCCAGAGCAGGGATCCGCGTGTAGCCGTGTAGCCAACTaGAGCTGGGGAGGAGCCACAGCAGGGCAAAGAGGGAGGATGAGC | + |
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Preference number: 1 (lower is better) Translates to: VSGPEQGSACSRVAN*SWGGATAGQRGRMS Trigger: GCTCATCCTCCCTCTTTGCCCTGCTGTGGCTCCTCCCCAGCTCCAGTTGGCTACACGGCTACACGCGGATCCCTGCTCTGGCCCACTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR CCA 90 bp | CAAACTGTACACAAACTGGCACTGGTCCTCGTCCACGCCCAGAACTaGGTTCCCAGGCCCCAAGGCGGAAAGCGGGAGGGAGGGGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: QTVHKLALVLVHAQN*VPRPQGGKREGGVS Trigger: GGACACCCCTCCCTCCCGCTTTCCGCCTTGGGGCCTGGGAACCCAGTTCTGGGCGTGGACGAGGACCAGTGCCAGTTTGTGTACAGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 90 bp | TGTAGACCAGGCTGCCCTCCAGTTCACAGATCCACCACCTGCCTCTaGCTCTGTTCTGGGATTAATGACTTGAGCACACACTGCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: CRPGCPPVHRSTTCL*LCSGINDLSTHCSP Trigger: TGGGGAGCAGTGTGTGCTCAAGTCATTAATCCCAGAACAGAGGCAGAGGCAGGTGGTGGATCTGTGAACTGGAGGGCAGCCTGGTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR CCA 90 bp | GAGAAGGAGAGGGAACATTGGTGGTGGAGATCAGAGAGAGAGAGCTaGGGTGGCAGGTGGGTCCTTACATCTACTGGTACATCTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: EKEREHWWWRSERES*GGRWVLTSTGTSGC Trigger: GCAGCCAGATGTACCAGTAGATGTAAGGACCCACCTGCCACCCCAGCTCTCTCTCTCTGATCTCCACCACCAATGTTCCCTCTCCTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 90 bp | GTCTCGGGCTACAGGATCTGCTCTGGTGCATTCGATTCGTGTCAGTaGGCGTTGGAAGGTGCTTTGGAGACTAAGGGCAAACTGTACACA | + |
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Preference number: 1 (lower is better) Translates to: VSGYRICSGAFDSCQ*ALEGALETKGKLYT Trigger: TGTGTACAGTTTGCCCTTAGTCTCCAAAGCACCTTCCAACGCGCACTGACACGAATCGAATGCACCAGAGCAGATCCTGTAGCCCGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR TCA 90 bp | TCTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTaGTCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSRGPCFNLQTPSHL*STDLCMHELSFKGP Trigger: TGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR TCA 90 bp | AGGAGCCAGGAAGTTGCGGTTTTTCTATCTGCTGCACAATCTTTGTaGAGTGGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCG | + |
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Preference number: 1 (lower is better) Translates to: RSQEVAVFLSAAQSL*SGCGQNLGFVGRKA Trigger: CGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGAAAAACCGCAACTTCCTGGCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR TCA 90 bp | CTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATaGAATATAATGTGGCAAGGGAGTATTTTTGGAGGGCCTGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: LHKVCCGGIYAYTPL*NIMWQGSIFGGPGQ Trigger: TTGGCCAGGCCCTCCAAAAATACTCCCTTGCCACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 90 bp | TGGAAACCATCCCCGAAGGAGCCAGGAAGTTGCGGTTTTTCTATCTaGTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: WKPSPKEPGSCGFSI*CTIFVKWMWSEFRI Trigger: AATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGAAAAACCGCAACTTCCTGGCTCCTTCGGGGATGGTTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR TCA 90 bp | AACCCATATGTTGGAAAAAGCCAATACCTGCAAGCTGTTTGTTCTTaGCCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCC | + |
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Preference number: 1 (lower is better) Translates to: NPYVGKSQYLQAVCS*PSQGMLWWHICLHA Trigger: GGCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACAGCTTGCAGGTATTGGCTTTTTCCAACATATGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 90 bp | CTCAGATTAATCCTCATAACCCATATGTTGGAAAAAGCCAATACCTaGAAGCTGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LRLILITHMLEKANT*KLFVLDLHKVCCGG Trigger: GCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACAGCTTGCAGGTATTGGCTTTTTCCAACATATGGGTTATGAGGATTAATCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR TCA 90 bp | ATTATTCAGCGGTTAAACTTATCATTAAAAGCTGAGTATGTGGCCTaGAGAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: IIQRLNLSLKAEYVA*RDVKSTGCSSRGPC Trigger: ACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTCTTCAGGCCACATACTCAGCTTTTAATGATAAGTTTAACCGCTGAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGCAAAAGGTGGGAAACTaGGCCCCGTGTAAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQQKVGN*APCKQG Trigger: GCCCTGCTTACACGGGGCTCAGTTTCCCACCTTTTG...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGATGGGCTCTGGGGAATaGAAACCATCCCCGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQMGSGE*KPSPKE Trigger: CTCCTTCGGGGATGGTTTCCATTCCCCAGAGCCCAT...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGGTCCACGCCCAGAACTaGGTTCCCAGGCCCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SRERLLLPSLRLILITHMVHAQN*VPRPQG Trigger: GCCTTGGGGCCTGGGAACCCAGTTCTGGGCGTGGAC...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGGTGAAGGTGCAGGTGTaGAGGACTGACAGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: AGQVLLTTALATPHLYLSVKVQV*RTDREG Trigger: GCCTTCTCTGTCAGTCCTTCACACCTGCACCTTCAC...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGGGCAGGCAGGGTGAGTaGGCCAGAGCAGGGATCCGC | + |
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Preference number: 2 (lower is better) Translates to: QGMLWWHICLHAVMKYNVGRQGE*ARAGIR Trigger: GCGGATCCCTGCTCTGGCCCACTCACCCTGCCTGCC...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGTCCAGCACGCAGAAGTaGAGCCAGGAAGATGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQSSTQK*SQEDEE Trigger: CTCTTCATCTTCCTGGCTCCACTTCTGCGTGCTGGA...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGACCCTGTGAGCCAGAATaGTTCCCCAGGCACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EMLKALAALPEDPVSISRPCEPE*FPRHLF Trigger: GAAGAGGTGCCTGGGGAACCATTCTGGCTCACAGGG...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGCTGGGATTAATGACTTaGGCACACACTGCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: AGQVLLTTALATPHLYLSLGLMT*AHTAPH Trigger: GTGGGGAGCAGTGTGTGCTCAAGTCATTAATCCCAG...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGCTAGTATGCAGGAAGTaGTGGGTACATACCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQLVCRK*WVHTPG Trigger: TCCTGGGGTATGTACCCAGCACTTCCTGCATACTAG...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGTCCACCACCTGCCTCTaGCTCTGTTCTGGGATTAAT | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQSTTCL*LCSGIN Trigger: ATTAATCCCAGAACAGAGGCAGAGGCAGGTGGTGGA...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGACTGAATGTCTGGTGTaGGAGAGAATCTCCCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: AGQVLLTTALATPHLYLSTECLV*ERISPL Trigger: GAGCGGGGAGATTCTCTCCCACACCAGACATTCAGT...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGGTAGCCAACTGGAGCTaGGGAGGAGCCACAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QGMLWWHICLHAVMKYNVVANWS*GGATAG Trigger: CCCTGCTGTGGCTCCTCCCCAGCTCCAGTTGGCTAC...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATAGGGGCCAGATACTTTaGTTCCCAACCCCACACGCT | + |
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Preference number: 2 (lower is better) Translates to: LSRERLLLPSLRLILITHRGQIL*FPTPHA Trigger: AGCGTGTGGGGTTGGGAACCAAAGTATCTGGCCCCT...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGGCTGCACAATCTTTGTaGAGTGGATGTGGTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LPEDPVSISRPHHICDPQAAQSL*SGCGQN Trigger: ATTCTGACCACATCCACTTCACAAAGATTGTGCAGC...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGGCTCAGTTGCTAGAGTaGTTGCCTAGTATGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: AGQVLLTTALATPHLYLSAQLLE*LPSMQE Trigger: TTCCTGCATACTAGGCAAGCACTCTAGCAACTGAGC...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGACAGGATCTGCTCTGGTaGATTCGATTCGTGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: EMLKALAALPEDPVSISRQDLLW*IRFVSV Trigger: CACTGACACGAATCGAATGCACCAGAGCAGATCCTG...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGAGCCGTGTAGCCAACTaGAGCTGGGGAGGAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: QGMLWWHICLHAVMKYNVSRVAN*SWGGAT Trigger: TGTGGCTCCTCCCCAGCTCCAGTTGGCTACACGGCT...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGACGCTGGGGAAACCATaGGCTCTGGGGAATGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: QVLLTTALATPHLYLSIQTLGKP*ALGNGN Trigger: GTTTCCATTCCCCAGAGCCCATGGTTTCCCCAGCGT...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGAAGGTCATGCAAAAGGTaGGAAACTGAGCCCCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: EMLKALAALPEDPVSISRRSCKR*ETEPRV Trigger: TACACGGGGCTCAGTTTCCCACCTTTTGCATGACCT...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGGCAGGTGTGAAGGACTaGCAGAGAAGGCTTGTCACT | + |
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Preference number: 2 (lower is better) Translates to: QVLLTTALATPHLYLSIQAGVKD*QRRLVT Trigger: AGTGACAAGCCTTCTCTGTCAGTCCTTCACACCTGC...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGAAGTGCTTGCCTAGTATaGAGGAAGTGCTGGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: EMLKALAALPEDPVSISRSACLV*RKCWVH Trigger: ATGTACCCAGCACTTCCTGCATACTAGGCAAGCACT...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGCACAAGCAGCAGCTTTaGCTTTATTGGCCCCGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SRERLLLPSLRLILITHMHKQQL*LYWPRR Trigger: CCTACGGGGCCAATAAAGCCAAAGCTGCTGCTTGTG...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTGAGGAGCGAGGAAGCTaGGTGTCTGCTCTGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: SICCTIFVKWMWSEFRICEERGS*VSALNH Trigger: GTGGTTCAGAGCAGACACTCAGCTTCCTCGCTCCTC...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCTTCGATTCGTGTCAGTaGGCGTTGGAAGGTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRFDSCQ*ALEGAL Trigger: CAAAGCACCTTCCAACGCGCACTGACACGAATCGAA...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATCACAGATCCACCACCTaGCTCTGCCTCTGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: STDLCMHELSFKGPNLEYHRSTT*LCLCSG Trigger: CCCAGAACAGAGGCAGAGGCAGGTGGTGGATCTGTG...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATCTTTCACTGAATGTCTaGTGTGGGAGAGAATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSRERLLLPSLRLILITHLSLNV*CGRESP Trigger: GGGAGATTCTCTCCCACACCAGACATTCAGTGAAAG...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGTGCACAAACCAGGCATaGTGGTTCATGCCTGCAACT | + |
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Preference number: 2 (lower is better) Translates to: SRERLLLPSLRLILITHMCTNQA*WFMPAT Trigger: AGTTGCAGGCATGAACCACCATGCCTGGTTTGTGCA...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGTACTTAAATAGGACCTaGAGGTGGGCAGAGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: QGMLWWHICLHAVMKYNVYLNRT*RWAEGP Trigger: TGGCCCCTCTGCCCACCTTCAGGTCCTATTTAAGTA...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTAGGCATGGTGGTTCATaGCTGCAACTCCAGCACGCA | + |
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Preference number: 2 (lower is better) Translates to: SICCTIFVKWMWSEFRICRHGGS*LQLQHA Trigger: TGCGTGCTGGAGTTGCAGGCATGAACCACCATGCCT...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGTGCGGTTTTTCTATCTaGTGCACAATCTTTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: AGQVLLTTALATPHLYLSCGFSI*CTIFVK Trigger: CTTCACAAAGATTGTGCAGCAGATAGAAAAACCGCA...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATCCATCCCCAGGCCCCTaGAAAGTGGTAGTCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: STDLCMHELSFKGPNLEYPSPGP*KVVVIQ Trigger: TTGGATGACTACCACTTTCCAGGGGCCTGGGGATGG...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR GCA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAACCGAGAATTCCCAATaGCCCAGGATATCCATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HICDPQTCACMNSVLKVQTENSQ*PRISMK Trigger: TTTCATGGATATCCTGGGGCATTGGGAATTCTCGGT...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CCA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAAAAAGGGGGTCTTGCTaGTATCAGTGTTTGTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: HICDPQTCACMNSVLKVQKRGSC*YQCLCD Trigger: GTCACACAAACACTGATACCAGCAAGACCCCCTTTT...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CCA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATGCTGGAATTAAAATaGACTCCTAAAGGGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HICDPQTCACMNSVLKVQMLELK*TPKGGG Trigger: CCCTCCCCCTTTAGGAGTCCATTTTAATTCCAGCAT...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR TCA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATGTGGAGCCAGGAAGATaGAGAGTTCAAGGTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: STDLCMHELSFKGPNLEYVEPGR*RVQGHP Trigger: AGGATGACCTTGAACTCTTCATCTTCCTGGCTCCAC...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGGGTAAGAGAGCTTTCTaGGCAAACAATAAAGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRERLLLPSLRLILITHMGKRAF*ANNKDL Trigger: CAGGTCTTTATTGTTTGCCCAGAAAGCTCTCTTACC...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGAGTGTAAAGGTTTATTaGGGGGAACGCAAGAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: SRERLLLPSLRLILITHMSVKVY*GERKST Trigger: AGTACTCTTGCGTTCCCCCCAATAAACCTTTACACT...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGCTGAGTAACAGTAGCTaGTTAACTATAAAAGGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QVLLTTALATPHLYLSIQLSNSS*LTIKGG Trigger: ACCCCCTTTTATAGTTAAGCAGCTACTGTTACTCAG...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCAAACAGGTCTTTATATaGATGATGGATGGATGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRKQVFI*MMDGCL Trigger: CAGACATCCATCCATCATTCATATAAAGACCTGTTT...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR TCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTGTATCAGTGTTTGTGTaGCTGTGTAGATGTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: SICCTIFVKWMWSEFRICVSVFV*LCRCHT Trigger: AGTGTGACATCTACACAGTCACACAAACACTGATAC...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGAGGTCTTTATATGAATaGTGGATGGATGTCTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: QGMLWWHICLHAVMKYNVRSLYE*WMDVCV Trigger: TACACAGACATCCATCCATCATTCATATAAAGACCT...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATACAATCTTTGTGAAGTaGATGTGGTCAGAATTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: STDLCMHELSFKGPNLEYTIFVK*MWSEFR Trigger: CCTAAATTCTGACCACATCCACTTCACAAAGATTGT...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | CACAAACTGGCACTGGTCCTCGTCCACGCCCAGAACTaGGTTCCCAGGCCCCAAGGCGGAAAGCGGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HKLALVLVHAQN*VPRPQGGKREG Trigger: TCCCTCCCGCTTTCCGCCTTGGGGCCTGGGAACCCAGTTCTGGGCGTGGACGAGGACCAGTGCCAGTTTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | TCGGGCGCACCGGGTGTGGGCTGGATCAGTGTCCTGTaGACTCTCACACTAATCCCTCCTCCTCCAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: SGAPGVGWISVL*TLTLIPPPPGP Trigger: GGGTCCTGGAGGAGGAGGGATTAGTGTGAGAGTGCACAGGACACTGATCCAGCCCACACCCGGTGCGCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | CAGGGATCCGCGTGTAGCCGTGTAGCCAACTGGAGCTaGGGAGGAGCCACAGCAGGGCAAAGAGGGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: QGSACSRVANWS*GGATAGQRGRM Trigger: CATCCTCCCTCTTTGCCCTGCTGTGGCTCCTCCCCAGCTCCAGTTGGCTACACGGCTACACGCGGATCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | ACTGGCCCCCAGCCCGAGACTGAGTCAGCGCAGAGTTaGGTCACAAACTGCACCGCCCCTGTGAGCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TGPQPETESAQS*VTNCTAPVSQN Trigger: ATTCTGGCTCACAGGGGCGGTGCAGTTTGTGACTCAACTCTGCGCTGACTCAGTCTCGGGCTGGGGGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | TCGGAAAATATGCAGGACTGGCCCCCAGCCCGAGACTaGGTCAGCGCAGAGTTGAGTCACAAACTGCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: SENMQDWPPARD*VSAELSHKLHR Trigger: GCGGTGCAGTTTGTGACTCAACTCTGCGCTGACTCAGTCTCGGGCTGGGGGCCAGTCCTGCATATTTTCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | CACTCTCACACTAATCCCTCCTCCTCCAGGACCCAGTaGTCTCGGGCTACAGGATCTGCTCTGGTGCATTCG | + |
|
Preference number: 3 (lower is better) Translates to: HSHTNPSSSRTQ*SRATGSALVHS Trigger: CGAATGCACCAGAGCAGATCCTGTAGCCCGAGACCACTGGGTCCTGGAGGAGGAGGGATTAGTGTGAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | TTGGAGACTAAGGGCAAACTGTACACAAACTGGCACTaGTCCTCGTCCACGCCCAGAACTGGGTTCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LETKGKLYTNWH*SSSTPRTGFPG Trigger: GCCTGGGAACCCAGTTCTGGGCGTGGACGAGGACCAGTGCCAGTTTGTGTACAGTTTGCCCTTAGTCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | TGGTGGAGATCAGAGAGAGAGAGCTGGGGTGGCAGGTaGGTCCTTACATCTACTGGTACATCTGGCTGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: WWRSERESWGGR*VLTSTGTSGCR Trigger: ACGGCAGCCAGATGTACCAGTAGATGTAAGGACCCACCTGCCACCCCAGCTCTCTCTCTCTGATCTCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | GGCTGCCCTCCAGTTCACAGATCCACCACCTGCCTCTaGCTCTGTTCTGGGATTAATGACTTGAGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: GCPPVHRSTTCL*LCSGINDLSTH Trigger: GTGTGTGCTCAAGTCATTAATCCCAGAACAGAGGCAGAGGCAGGTGGTGGATCTGTGAACTGGAGGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR GCA 72 bp | AGACCAGGCTGCCCTCCAGTTCACAGATCCACCACCTaGCTCTGCCTCTGTTCTGGGATTAATGACTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RPGCPPVHRSTT*LCLCSGINDLS Trigger: GCTCAAGTCATTAATCCCAGAACAGAGGCAGAGGCAGGTGGTGGATCTGTGAACTGGAGGGCAGCCTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | AGGGAACATTGGTGGTGGAGATCAGAGAGAGAGAGCTaGGGTGGCAGGTGGGTCCTTACATCTACTGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: REHWWWRSERES*GGRWVLTSTGT Trigger: TGTACCAGTAGATGTAAGGACCCACCTGCCACCCCAGCTCTCTCTCTCTGATCTCCACCACCAATGTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | GGTCCAAATCTAGAATATTGGTGCCTAGCATCCAAGTaGCAGCCAACTATCACTGCCTCCACACCCATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GPNLEYWCLASK*QPTITASTPIP Trigger: GGGGATGGGTGTGGAGGCAGTGATAGTTGGCTGGCACTTGGATGCTAGGCACCAATATTCTAGATTTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | ATGGTGGTTCATGCCTGCAACTCCAGCACGCAGAAGTaGAGCCAGGAAGATGAAGAGTTCAAGGTCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MVVHACNSSTQK*SQEDEEFKVIL Trigger: GAGGATGACCTTGAACTCTTCATCTTCCTGGCTCCACTTCTGCGTGCTGGAGTTGCAGGCATGAACCACCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | GAGAGGAGGAGAGGCTATAGCACCGAGAATTCCCAATaGCCCAGGATATCCATGAAAACCTGGGCTTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ERRRGYSTENSQ*PRISMKTWALV Trigger: TACCAAAGCCCAGGTTTTCATGGATATCCTGGGGCATTGGGAATTCTCGGTGCTATAGCCTCTCCTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | TACAGGATCTGCTCTGGTGCATTCGATTCGTGTCAGTaGGCGTTGGAAGGTGCTTTGGAGACTAAGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: YRICSGAFDSCQ*ALEGALETKGK Trigger: TTTGCCCTTAGTCTCCAAAGCACCTTCCAACGCGCACTGACACGAATCGAATGCACCAGAGCAGATCCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | CTGCAACTCCAGCACGCAGAAGTGGAGCCAGGAAGATaGAGAGTTCAAGGTCATCCTCAGCTACATAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQLQHAEVEPGR*RVQGHPQLHKK Trigger: CTTCTTATGTAGCTGAGGATGACCTTGAACTCTTCATCTTCCTGGCTCCACTTCTGCGTGCTGGAGTTGCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | GGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTaGTCCACAGACCTGTGCATGCATGAACTCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GPCFNLQTPSHL*STDLCMHELSF Trigger: AAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATGAGGGGCCAGATACTTaGGTTCCCAACCCCACACGC | + |
|
Preference number: 3 (lower is better) Translates to: STDLCMHELSFKGPNLEYEGPDT*VPNPTR Trigger: GCGTGTGGGGTTGGGAACCAAAGTATCTGGCCCCTC...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| 3UTR-3UTR CAA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAGAAGGAGCCAGGAAGTaGCGGTTTTTCTATCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HICDPQTCACMNSVLKVQEGARK*RFFYLL Trigger: CAGCAGATAGAAAAACCGCAACTTCCTGGCTCCTTC...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGGATCTACAAAGGGTTTaGTTTTCAGGTCATGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPEDPVSISRPHHICDPQDLQRV*FSGHAK Trigger: TTTTGCATGACCTGAAAACAAAACCCTTTGTAGATC...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | CCGAAGGAGCCAGGAAGTTGCGGTTTTTCTATCTGCTaGACAATCTTTGTGAAGTGGATGTGGTCAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: PKEPGSCGFSIC*TIFVKWMWSEF Trigger: AAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGAAAAACCGCAACTTCCTGGCTCCTTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | GGGTTGGGGAATGGCTCAGTGGGTAAGAGAGCTTTCTaGGCAAACAATAAAGACCTGAATTTAAGTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GLGNGSVGKRAF*ANNKDLNLSSQ Trigger: TTGGGAACTTAAATTCAGGTCTTTATTGTTTGCCCAGAAAGCTCTCTTACCCACTGAGCCATTCCCCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGTGCTGGTATCAGTGTTaGTGTGACTGTGTAGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SRERLLLPSLRLILITHMCWYQC*CDCVDV Trigger: GACATCTACACAGTCACACAAACACTGATACCAGCA...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | GTTGGAAAAAGCCAATACCTGCAAGCTGTTTGTTCTTaGCCTTCACAAGGTATGCTGTGGTGGCATATATGC | + |
|
Preference number: 3 (lower is better) Translates to: VGKSQYLQAVCS*PSQGMLWWHIC Trigger: GCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACAGCTTGCAGGTATTGGCTTTTTCCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | GAACTCAGTTTTAAAGGTCCAAATCTAGAATATTGGTaGCTAGCATCCAAGTGCCAGCCAACTATCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ELSFKGPNLEYW*LASKCQPTITA Trigger: GGCAGTGATAGTTGGCTGGCACTTGGATGCTAGGCACCAATATTCTAGATTTGGACCTTTAAAACTGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | AAATATAATGTGGCAAGGGAGTATTTTTGGAGGGCCTaGCCAAGGTGTACCCCTGAGAAGTTACACCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: KYNVAREYFWRA*PRCTPEKLHHK Trigger: TTTATGGTGTAACTTCTCAGGGGTACACCTTGGCCAGGCCCTCCAAAAATACTCCCTTGCCACATTATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | GTATGCTGTGGTGGCATATATGCTTACACGCCGTTATaGAATATAATGTGGCAAGGGAGTATTTTTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VCCGGIYAYTPL*NIMWQGSIFGG Trigger: CCCTCCAAAAATACTCCCTTGCCACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR TCA 72 bp | GAAGTTGCGGTTTTTCTATCTGCTGCACAATCTTTGTaGAGTGGATGTGGTCAGAATTTAGGATTTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EVAVFLSAAQSL*SGCGQNLGFVG Trigger: ACCCACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGAAAAACCGCAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR GCA 72 bp | ATCCTCATAACCCATATGTTGGAAAAAGCCAATACCTaGAAGCTGTTTGTTCTTGACCTTCACAAGGTATGC | + |
|
Preference number: 3 (lower is better) Translates to: ILITHMLEKANT*KLFVLDLHKVC Trigger: GCATACCTTGTGAAGGTCAAGAACAAACAGCTTGCAGGTATTGGCTTTTTCCAACATATGGGTTATGAGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CCA 72 bp | CATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATTaGTGCCTAGCATCCAAGTGCCAGCCAACTATCACT | + |
|
Preference number: 3 (lower is better) Translates to: HELSFKGPNLEY*CLASKCQPTIT Trigger: AGTGATAGTTGGCTGGCACTTGGATGCTAGGCACCAATATTCTAGATTTGGACCTTTAAAACTGAGTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGACCACGAAGGGGCCCATaGGGGTGCCCTCAAACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EMLKALAALPEDPVSISRPRRGP*GCPQTH Trigger: GTGCGTTTGAGGGCACCCGCATGGGCCCCTTCGTGG...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGAAGCAGTCGGTGGTaGGCTCGGGACCCACGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRRSSRW*ARDPRG Trigger: CCCGCGTGGGTCCCGAGCCCACCACCGACTGCTTCG...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGCCACGAAGCAGTCGGTaGTGGGCTCGGGACCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SRERLLLPSLRLILITHMPRSSR*WARDPR Trigger: GCGTGGGTCCCGAGCCCACCACCGACTGCTTCGTGG...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGCCAGAAGGTACTGGATaGAGCTGGTTTTGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPEDPVSISRPHHICDPQPEGTG*SWFCRC Trigger: GCACCGGCAAAACCAGCTTCATCCAGTACCTTCTGG...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGTGCCCAGCGCCCACATaGGCGCCCCGTAGACGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGMLWWHICLHAVMKYNVCPAPT*APRRRA Trigger: TGCGCGTCTACGGGGCGCTCATGTGGGCGCTGGGCA...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGGAGCCAGGGACTTCCTaGTCCAGAAGGTACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPEDPVSISRPHHICDPQEPGTS*SRRYWM Trigger: CATCCAGTACCTTCTGGAGCAGGAAGTCCCTGGCTC...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGGCGGAAGGGCTTCTCTaGGTCCACAACGAGAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPEDPVSISRPHHICDPQAEGLL*VHNESI Trigger: AATGCTCTCGTTGTGGACCCAGAGAAGCCCTTCCGC...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGAGTTTCACTAGGTCGTTaGGCTTGCGCAGCGCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMLKALAALPEDPVSISRVSLGR*ACAAPH Trigger: ATGCGGCGCTGCGCAAGCTCAACGACCTAGTGAAAC...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCCTCTCCAGCTCCTCCTaGCGAAGCAGCGGCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRLSSSS*RSSGIS Trigger: GCTTATGCCGCTGCTTCGGCAGGAGGAGCTGGAGAG...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGTTGCCGGTGCTATACTaGCCGGCCACCAGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRERLLLPSLRLILITHMLPVLY*PATSTM Trigger: CATGGTGCTGGTGGCCGGCCAGTATAGCACCGGCAA...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGATGCTCTCCAGGACCTaGTTGGGGAGTTGGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCGQNLGFVGRKAKERFMMLSRT*LGSWAH Trigger: GTGCGCCCAACTCCCCAACCAGGTCCTGGAGAGCAT...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGTTAGCCTCAATGAGGTaGCTGGCCAAGGCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGQVLLTTALATPHLYLSLASMR*LAKANS Trigger: GGAGTTTGCCTTGGCCAGCCACCTCATTGAGGCTAA...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGTGCGATACAGCTCCTTaGGGGATGAGGTCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCGQNLGFVGRKAKERFMCDTAP*GMRSRC Trigger: GCACCGTGACCTCATCCCTCAAGGAGCTGTATCGCA...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGGGGATGAGGTCACGGTaGGGATGGCCTCAGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGMLWWHICLHAVMKYNVGMRSR*GWPQVA Trigger: AGCGACCTGAGGCCATCCGCACCGTGACCTCATCCC...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGAGCTGGTTTTGCCGGTaGTATACTGGCCGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRERLLLPSLRLILITHMSWFCR*YTGRPP Trigger: TGGTGGCCGGCCAGTATAGCACCGGCAAAACCAGCT...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGCCTCATCATCCAGCATaGCGTCTCGGTCGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTALATPHLYLSIQPHHPA*RLGRHR Trigger: GCGATGTCGACCGAGACGGCATGCTGGATGATGAGG...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGCCAGCGCAGGACAGCTaGGAAGTCGTAGCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGMLWWHICLHAVMKYNVPAQDS*EVVATA Trigger: AGCCGTGGCTACGACTTCCCAGCTGTCCTGCGCTGG...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGACCTTCCCGAACACCGTaGGCATCTCTTTCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EMLKALAALPEDPVSISRPSRTP*ASLSSG Trigger: ACCTGAAGAAAGAGATGCCCACGGTGTTCGGGAAGG...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGAGCTTGGCAATGTCTTaGGCCAGCATGTCATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGQVLLTTALATPHLYLSSLAMS*ASMSSS Trigger: GCTAGATGACATGCTGGCCCAAGACATTGCCAAGCT...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATCAGCTCCTTGAGGGATaGGGTCACGGTGCGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: STDLCMHELSFKGPNLEYQLLEG*GHGADG Trigger: GCCATCCGCACCGTGACCTCATCCCTCAAGGAGCTG...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGTTCGGCATCATCTTCTaGGCCCTCCTCACCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTALATPHLYLSIQFGIIF*ALLTIL Trigger: GAGGATGGTGAGGAGGGCTCAGAAGATGATGCCGAA...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATTGTCTCCACCATGTCTaGCTTGTTGAGTACCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSRERLLLPSLRLILITHCLHHV*LVEYHA Trigger: CGCGTGGTACTCAACAAGGCAGACATGGTGGAGACA...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGATGTTTCCAAAAGGGTTaGGTTTGCGGAAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EMLKALAALPEDPVSISRCFQKG*VCGRAS Trigger: AGAAGCCCTTCCGCAAACTCAACCCTTTTGGAAACA...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGCCAGCACCATGGGTTTaGCGTCGAAGTCAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTALATPHLYLSIQPAPWV*RRSQHL Trigger: AAGATGCTGACTTCGACGGCAAACCCATGGTGCTGG...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAGCCATCAACAGCTCCTaGATCTTCTGGCAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HICDPQTCACMNSVLKVQAINSS*IFWQSG Trigger: TCCTGACTGCCAGAAGATGCAGGAGCTGTTGATGGC...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CCA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATAGCTCCTGCATCTTCTaGCAGTCAGGAAAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRERLLLPSLRLILITHSSCIF*QSGKSP Trigger: TGGAGACTTTCCTGACTGCCAGAAGATGCAGGAGCT...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGGGATCTTCGCAAAGATaGCAGGCAGCTTCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SRERLLLPSLRLILITHMGSSQR*QAASGS Trigger: TGATCCTGAAGCTGCCTGTCATCTTTGCGAAGATCC...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR TCA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGGCGAGTGGAACTTGGTaGAGTCATGTGCCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GCGQNLGFVGRKAKERFMASGTW*SHVPST Trigger: TGTTGATGGCACATGACTTCACCAAGTTCCACTCGC...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTCCAGGGGAGATGTGGTaGTCCAGCTGGATCTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SICCTIFVKWMWSEFRICPGEMW*SSWIFA Trigger: TGCGAAGATCCAGCTGGAGCACCACATCTCCCCTGG...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | AGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATATGTGCTCCAGAAGGTACTaGATGAAGCTGGTTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRERLLLPSLRLILITHMCSRRY*MKLVLP Trigger: CGGCAAAACCAGCTTCATCCAGTACCTTCTGGAGCA...CATATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGATGTGGTGCTCCAGCTaGATCTTCGCAAAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GCGQNLGFVGRKAKERFMMWCSS*IFAKMT Trigger: TGTCATCTTTGCGAAGATCCAGCTGGAGCACCACAT...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGATTTGGACTTGTCCTTaGTCACCACCCATTCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLLTTALATPHLYLSIQIWTCP*SPPIRH Trigger: ATGCCGAATGGGTGGTGACCAAGGACAAGTCCAAAT...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTTCCCCAGCACAGAGTTaGGTAGCTTTGTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SICCTIFVKWMWSEFRICSPAQS*VALCPP Trigger: TGGTGGGCACAAAGCTACCCAACTCTGTGCTGGGGA...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CAA 72 bp | CTTAACTATAAAAGGGGGTCTTGCTGGTATCAGTGTTaGTGTGACTGTGTAGATGTCACACTCCTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNYKRGSCWYQC*CDCVDVTLLRV Trigger: GACTCTCAGGAGTGTGACATCTACACAGTCACACAAACACTGATACCAGCAAGACCCCCTTTTATAGTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTAGTTGGGTAGCTTTGTaGCCACCATCCAGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SICCTIFVKWMWSEFRICSWVAL*PPSRFW Trigger: CCAAAACCTGGATGGTGGGCACAAAGCTACCCAACT...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR GCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTCTTGGTGAAGTCATGTaGCATCAACAGCTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SICCTIFVKWMWSEFRICLGEVM*HQQLLH Trigger: ATGCAGGAGCTGTTGATGGCACATGACTTCACCAAG...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| 3UTR CAA 72 bp | AAAGTGGTAGTCATCCAAAGAGATCTACAAAGGGTTTaGTTTTCAGGTCATGCAAAAGGTGGGAAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVVVIQRDLQRV*FSGHAKGGKLS Trigger: GCTCAGTTTCCCACCTTTTGCATGACCTGAAAACAAAACCCTTTGTAGATCTCTTTGGATGACTACCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CCA 90 bp | TCTATCTGCTGCACAATCTTTGTGAAGTGGATGTGGTCAGAATTTAGGATTTGTAGATTTCATCGTATTTaGACTTGTCCTTGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SICCTIFVKWMWSEFRICRFHRI*TCPWSP Trigger: TGGTGACCAAGGACAAGTCCAAATACGATGAAATCT...ACAAATCCTAAATTCTGACCACATCCACTTCACAAAGATTGTGCAGCAGATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS GCA 90 bp | CTATTGCTTCATCAGGGCCCCGCTCCACGAAGGGGCCCATGCGGGTaGCCTCAAACGCACCGCCCTGCACTCCAGCCTCGACACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLHQGPAPRRGPCG*PQTHRPALQPRHSP Trigger: TGGAGAGTGTCGAGGCTGGAGTGCAGGGCGGTGCGTTTGAGGGCACCCGCATGGGCCCCTTCGTGGAGCGGGGCCCTGATGAAGCAATAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS TCA 90 bp | TTCCTCCAGGGGAAGAAGTTTCGTGCGATACAGCTCCTTGAGGGATaGGGTCACGGTGCGGATGGCCTCAGGTCGCTGGCCCCGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLQGKKFRAIQLLEG*GHGADGLRSLAPGP Trigger: GGGGCCCGGGGCCAGCGACCTGAGGCCATCCGCACCGTGACCTCATCCCTCAAGGAGCTGTATCGCACGAAACTTCTTCCCCTGGAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCGGCGTGCCCACCACCTaGCCCAGCGCCCACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRGVPTT*PSAHMS Trigger: GCTCATGTGGGCGCTGGGCAAGGTGGTGGGCACGCC...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS TCA 90 bp | GTATTTGGACTTGTCCTTGGTCACCACCCATTCGGCATCATCTTCTaGGCCCTCCTCACCATCCTCTATTGCTTCATCAGGGCCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VFGLVLGHHPFGIIF*ALLTILYCFIRAPL Trigger: GAGCGGGGCCCTGATGAAGCAATAGAGGATGGTGAGGAGGGCTCAGAAGATGATGCCGAATGGGTGGTGACCAAGGACAAGTCCAAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATACTAGGTCGTTGAGCTaGCGCAGCGCCGCATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRERLLLPSLRLILITHTRSLS*RSAAWR Trigger: GCGCCATGCGGCGCTGCGCAAGCTCAACGACCTAGT...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGACCAGCACCATGGGTTaGCCGTCGAAGTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LPEDPVSISRPHHICDPQTSTMG*PSKSAS Trigger: AGATGCTGACTTCGACGGCAAACCCATGGTGCTGGT...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGAGCAGCGGCATAAGCTaGGCAATGTCTTGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQVLLTTALATPHLYLSSSGIS*AMSWAS Trigger: GCTGGCCCAAGACATTGCCAAGCTTATGCCGCTGCT...CGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATCGTTTCACTAGGTCGTaGAGCTTGCGCAGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRERLLLPSLRLILITHRFTRS*SLRSAA Trigger: TGCGGCGCTGCGCAAGCTCAACGACCTAGTGAAACG...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGCTCTCCAGGACCTGGTaGGGGAGTTGGGCGCACATA | + |
|
Preference number: 5 (lower is better) Translates to: QVLLTTALATPHLYLSIQLSRTW*GSWAHI Trigger: TATGTGCGCCCAACTCCCCAACCAGGTCCTGGAGAG...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CAAGTACTGTTAACTACAGCCCTAGCCACACCACACCTTTATCTTTCGATACAGCTCCCCAGCACAGAGTaGGGTAGCTTTGTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QVLLTTALATPHLYLSIQLPSTE*GSFVPT Trigger: GGTGGGCACAAAGCTACCCAACTCTGTGCTGGGGAG...CTGTATCGAAAGATAAAGGTGTGGTGTGGCTAGGGCTGTAGTTAACAGTACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGTAGAGAAAGGCTGTTGCTGCCAAGCCTCAGATTAATCCTCATAACCCATCCAAAAGGGTTGAGTTaGCGGAAGGGCTTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSRERLLLPSLRLILITHPKGLS*RKGFSG Trigger: CCCAGAGAAGCCCTTCCGCAAACTCAACCCTTTTGG...ATGGGTTATGAGGATTAATCTGAGGCTTGGCAGCAACAGCCTTTCTCTACTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCCCCACCATCCAGGTTTaGGCCTTAGAGCCACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRPTIQV*ALEPLS Trigger: GCTGAGTGGCTCTAAGGCCAAAACCTGGATGGTGGG...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGTTCTTGACCTTCACAAGGTATGCTGTGGTGGCATATATGCTTACACGCTGGATGAAGCTGGTTTaGCCGGTGCTATACTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLFLTFTRYAVVAYMLTRWMKLV*PVLYWP Trigger: CGGCCAGTATAGCACCGGCAAAACCAGCTTCATCCA...GCGTGTAAGCATATATGCCACCACAGCATACCTTGTGAAGGTCAAGAACAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS-3UTR CAA 90 bp | GAGATGTTAAAAGCACTGGCTGCTCTTCCAGAGGACCCTGTTTCAATCTCCAGATCGGAAATCTCCAGCTaGTGGGCATCAAAGAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EMLKALAALPEDPVSISRSEISS*WASKSK Trigger: CTTGCTCTTTGATGCCCACAAGCTGGAGATTTCCGA...TCTGGAGATTGAAACAGGGTCCTCTGGAAGAGCAGCCAGTGCTTTTAACATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
||
| CDS CCA 90 bp | GCTTGCCATCAGCAGGAGCTAAGTTGTAGAAGATTTCATCGTATTTaGACTTGTCCTTGGTCACCACCCATTCGGCATCATCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACHQQELSCRRFHRI*TCPWSPPIRHHLLS Trigger: GCTCAGAAGATGATGCCGAATGGGTGGTGACCAAGGACAAGTCCAAATACGATGAAATCTTCTACAACTTAGCTCCTGCTGATGGCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | CACATCTGTGATCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAGGCTCACTCTCTGTTTaGCACCTGATAGGATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: HICDPQTCACMNSVLKVQGSLSV*HLIGCQ Trigger: CTGGCATCCTATCAGGTGCAAAACAGAGAGTGAGCC...TTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGATCACAGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | CTTCCAGAGGACCCTGTTTCAATCTCCAGACCCCATCACATCTGTGATCCACAGAAGATTTCATCGTATTaGGACTTGTCCTTGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: LPEDPVSISRPHHICDPQKISSY*DLSLVT Trigger: GGTGACCAAGGACAAGTCCAAATACGATGAAATCTT...CTGTGGATCACAGATGTGATGGGGTCTGGAGATTGAAACAGGGTCCTCTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGTATTTGGACTTGTCCTaGGTCACCACCCATTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: GCGQNLGFVGRKAKERFMYLDLS*VTTHSA Trigger: TGCCGAATGGGTGGTGACCAAGGACAAGTCCAAATA...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | GGATGTGGTCAGAATTTAGGATTTGTGGGTAGGAAAGCGAAAGAGAGGTTCATGTCATCGTATTTGGACTaGTCCTTGGTCACCACCCAT | + |
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Preference number: 5 (lower is better) Translates to: GCGQNLGFVGRKAKERFMSSYLD*SLVTTH Trigger: ATGGGTGGTGACCAAGGACAAGTCCAAATACGATGA...CATGAACCTCTCTTTCGCTTTCCTACCCACAAATCCTAAATTCTGACCACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATCAGAGTTGGGTAGCTTaGTGCCCACCATCCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: STDLCMHELSFKGPNLEYQSWVA*CPPSRF Trigger: AAACCTGGATGGTGGGCACAAAGCTACCCAACTCTG...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | TCCACAGACCTGTGCATGCATGAACTCAGTTTTAAAGGTCCAAATCTAGAATATGTGTTTCCAAAAGGGTaGAGTTTGCGGAAGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: STDLCMHELSFKGPNLEYVFPKG*SLRKGF Trigger: GAAGCCCTTCCGCAAACTCAACCCTTTTGGAAACAC...ATATTCTAGATTTGGACCTTTAAAACTGAGTTCATGCATGCACAGGTCTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS-3UTR CAA 90 bp | CAAGGTATGCTGTGGTGGCATATATGCTTACACGCCGTTATGAAATATAATGTGTTTAGCGAGTGGAACTaGGTGAAGTCATGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: QGMLWWHICLHAVMKYNVFSEWN*VKSCAI Trigger: GATGGCACATGACTTCACCAAGTTCCACTCGCTAAA...CACATTATATTTCATAACGGCGTGTAAGCATATATGCCACCACAGCATACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS GCA 72 bp | CATCAGGGCCCCGCTCCACGAAGGGGCCCATGCGGGTaGCCTCAAACGCACCGCCCTGCACTCCAGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: HQGPAPRRGPCG*PQTHRPALQPR Trigger: TCGAGGCTGGAGTGCAGGGCGGTGCGTTTGAGGGCACCCGCATGGGCCCCTTCGTGGAGCGGGGCCCTGATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CAA 90 bp | GAGCCAGGGACTTCCTGCTCCAGAAGGTACTGGATGAAGCTGGTTTaGCCGGTGCTATACTGGCCGGCCACCAGCACCATGGGTTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: EPGTSCSRRYWMKLV*PVLYWPATSTMGLP Trigger: CGGCAAACCCATGGTGCTGGTGGCCGGCCAGTATAGCACCGGCAAAACCAGCTTCATCCAGTACCTTCTGGAGCAGGAAGTCCCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CCA 72 bp | GAGGTCCACGCGTTCAGCAAACCAGCGCAGGACAGCTaGGAAGTCGTAGCCACGGCTCACTCTCTGTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: EVHAFSKPAQDS*EVVATAHSLFC Trigger: GCAAAACAGAGAGTGAGCCGTGGCTACGACTTCCCAGCTGTCCTGCGCTGGTTTGCTGAACGCGTGGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098799.5 ENSMUST00000144956.2 |
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| CDS CAA 72 bp | ACTTCCTGCTCCAGAAGGTACTGGATGAAGCTGGTTTaGCCGGTGCTATACTGGCCGGCCACCAGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: TSCSRRYWMKLV*PVLYWPATSTM Trigger: CATGGTGCTGGTGGCCGGCCAGTATAGCACCGGCAAAACCAGCTTCATCCAGTACCTTCTGGAGCAGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CCA 72 bp | GGTAGACCATGGCCTTCGAGCTTAGCCTCAATGAGGTaGCTGGCCAAGGCAAACTCCTCATCATCCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: GRPWPSSLASMR*LAKANSSSSSM Trigger: CATGCTGGATGATGAGGAGTTTGCCTTGGCCAGCCACCTCATTGAGGCTAAGCTCGAAGGCCATGGTCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS TCA 72 bp | GGGTTTGCCGTCGAAGTCAGCATCTTCAAGGGCCGGTaGATGGAAAGACCCAAAACGGTAGTGTTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GFAVEVSIFKGR*MERPKTVVFLQ Trigger: CTGGAGGAACACTACCGTTTTGGGTCTTTCCATTCACCGGCCCTTGAAGATGCTGACTTCGACGGCAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CCA 72 bp | GTGAAGTCATGTGCCATCAACAGCTCCTGCATCTTCTaGCAGTCAGGAAAGTCTCCAGGGGAGATGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VKSCAINSSCIF*QSGKSPGEMWC Trigger: GCACCACATCTCCCCTGGAGACTTTCCTGACTGCCAGAAGATGCAGGAGCTGTTGATGGCACATGACTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS TCA 72 bp | CTTGTCCTTGGTCACCACCCATTCGGCATCATCTTCTaGGCCCTCCTCACCATCCTCTATTGCTTCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVLGHHPFGIIF*ALLTILYCFIR Trigger: CCTGATGAAGCAATAGAGGATGGTGAGGAGGGCTCAGAAGATGATGCCGAATGGGTGGTGACCAAGGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CAA 90 bp | GCGCACATAAACCTGTTGAGAAAAGTGTTTCCAAAAGGGTTGAGTTaGCGGAAGGGCTTCTCTGGGTCCACAACGAGAGCATTTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: AHINLLRKVFPKGLS*RKGFSGSTTRAFPG Trigger: GCCCGGAAATGCTCTCGTTGTGGACCCAGAGAAGCCCTTCCGCAAACTCAACCCTTTTGGAAACACTTTTCTCAACAGGTTTATGTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CAA 72 bp | AACCTGTTGAGAAAAGTGTTTCCAAAAGGGTTGAGTTaGCGGAAGGGCTTCTCTGGGTCCACAACGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: NLLRKVFPKGLS*RKGFSGSTTRA Trigger: TGCTCTCGTTGTGGACCCAGAGAAGCCCTTCCGCAAACTCAACCCTTTTGGAAACACTTTTCTCAACAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CCA 72 bp | AGTTGTAGAAGATTTCATCGTATTTGGACTTGTCCTTaGTCACCACCCATTCGGCATCATCTTCTGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SCRRFHRIWTCP*SPPIRHHLLSP Trigger: AGGGCTCAGAAGATGATGCCGAATGGGTGGTGACCAAGGACAAGTCCAAATACGATGAAATCTTCTACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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| CDS CCA 72 bp | CAGCAGGAGCTAAGTTGTAGAAGATTTCATCGTATTTaGACTTGTCCTTGGTCACCACCCATTCGGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: QQELSCRRFHRI*TCPWSPPIRHH Trigger: ATGATGCCGAATGGGTGGTGACCAAGGACAAGTCCAAATACGATGAAATCTTCTACAACTTAGCTCCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098799.5 |
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