Pregenerated sensors for EHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024772Ensembl transcript IDs: ENSMUST00000025684.4
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGCCAGGCTGGAGCTCACCCTCAGCAGGGCCCAGAACAGTGCTaGGGGGTTGGCAGGCAGCTCCCTGAAGCCCACCTACAGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: TGQAGAHPQQGPEQC*GVGRQLPEAHLQCQ Trigger: CTGACACTGTAGGTGGGCTTCAGGGAGCTGCCTGCCAACCCCCCAGCACTGTTCTGGGCCCTGCTGAGGGTGAGCTCCAGCCTGGCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 90 bp | CAGCTCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATaGCCTACCCAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCAC | + |
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Preference number: 1 (lower is better) Translates to: QLPEAHLQCQRSRLQ*PTQLSGKPTLTANH Trigger: GTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 90 bp | CCTACAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTaGAAAGCCCACCCTGACAGCCAACCACTGGCCACAGGATGTGTC | + |
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Preference number: 1 (lower is better) Translates to: PTVSEEQAAMPYPAQ*KAHPDSQPLATGCV Trigger: GACACATCCTGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 90 bp | CAAATAACAGTGGTTGGGTCTTCTACCTGTGGCTGCTGTGCTGGCTaGGGTGTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: QITVVGSSTCGCCAG*GVRGCGQSKVCTPQ Trigger: CTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGACACCCCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 90 bp | CCCCTCAGCCAGAAAGCAAACTCAAGCCCTAGGATGTCAGCTCTATaGTGGCTCTGGGGTGGAAATGCTCCAAGGCTGGAGTATAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PLSQKANSSPRMSAL*WLWGGNAPRLEYRK Trigger: TTTCCTATACTCCAGCCTTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGTTTGCTTTCTGGCTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 90 bp | CAGAAAGCAAACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTaGGGTGGAAATGCTCCAAGGCTGGAGTATAGGAAAGAGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: QKANSSPRMSALCWL*GGNAPRLEYRKEET Trigger: TGTCTCCTCTTTCCTATACTCCAGCCTTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGTTTGCTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 90 bp | TCTTGGTCAAGTATCAAGTGTCACTACAGAACACTAAGTAGCTTATaGATTTTCCTAGACGTCATGGACTGTCTCGCAACTCCTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SWSSIKCHYRTLSSL*IFLDVMDCLATPPA Trigger: GGCAGGAGGAGTTGCGAGACAGTCCATGACGTCTAGGAAAATGCATAAGCTACTTAGTGTTCTGTAGTGACACTTGATACTTGACCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR TCA 90 bp | CTGGAGTATAGGAAAGAGGAGACAAAAATCACAGTTTTGAACGAGTaGTGTAAGTTACTCAAAGTCTTGGTCAAGTATCAAGTGTCACTA | + |
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Preference number: 1 (lower is better) Translates to: LEYRKEETKITVLNE*CKLLKVLVKYQVSL Trigger: TAGTGACACTTGATACTTGACCAAGACTTTGAGTAACTTACATCACTCGTTCAAAACTGTGATTTTTGTCTCCTCTTTCCTATACTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | CTGACAGCCAACCACTGGCCACAGGATGTGTCCGGGTCCCCAGGCTACAGTGGGGGAGCAGGGACCTCCTaGTTACACAGCCCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LTANHWPQDVSGSPGYSGGAGTS*LHSPGA Trigger: TGCCCCAGGGCTGTGTAAGCAGGAGGTCCCTGCTCC...CCCACTGTAGCCTGGGGACCCGGACACATCCTGTGGCCAGTGGTTGGCTGTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGCAGGCAGCTCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATCCCTCCCCCAATTTCTaGCCCTCCAGGCCCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LAGSSLKPTYSVRGAGCNPSPNF*PSRPQP Trigger: GGGCTGGGGCCTGGAGGGGCAGAAATTGGGGGAGGG...ATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGAGCTGCCTGCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | TACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGGCCCCAGCCCACCTaGGCAGACAAGGAGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: YCSVWGSQDTQTSLAQQRRPQPT*ADKELV Trigger: CACCAGCTCCTTGTCTGCCCAGGTGGGCTGGGGCCT...CCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCTACCCAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCACTGGCCACATACCTGTGGCTGCTGTaGTGGCTGGGGTGTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: MPYPAQWKAHPDSQPLATYLWLL*WLGCQG Trigger: CCCCTGACACCCCAGCCAGCACAGCAGCCACAGGTA...TGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTGGAAAGCCCACCGGCTGCTGTGCTGGCTaGGGTGTCAGGGGATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: QCQRSRLQCPTQLSGKPTGCCAG*GVRGCG Trigger: TCCACATCCCCTGACACCCCAGCCAGCACAGCAGCC...GGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGCAGGCAGCTCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATGGTGGGGTGGAGAGGTaGCTGGCTTGGATAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LAGSSLKPTYSVRGAGCNGGVER*LAWIGE Trigger: CTCCCCTATCCAAGCCAGGCACCTCTCCACCCCACC...ATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGAGCTGCCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGACTGGAGCACAGAACACGGCTAGCAGGAAACAACCTGCTGCCCTTGGGTGCCAGGGTGGGGTaGAGAGGTGCCTGGCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: SRGLEHRTRLAGNNLLPLGARVG*RGAWLG Trigger: TCCAAGCCAGGCACCTCTCCACCCCACCCTGGCACC...CAAGGGCAGCAGGTTGTTTCCTGCTAGCCGTGTTCTGTGCTCCAGTCCTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTTCCTCTTACCAGCCCCAGACCACCCCAGGTCACAGGGCCTACTGCCTGGCTCTATGCTGGCTCTaGGGTGGAAATGCTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QASSYQPQTTPGHRAYCLALCWL*GGNAPR Trigger: CCTTGGAGCATTTCCACCCCAGAGCCAGCATAGAGC...CAGGCAGTAGGCCCTGTGACCTGGGGTGGTCTGGGGCTGGTAAGAGGAAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTGGAAAGCCCACCCATTTCAGACCCCTCTaGGCAGAAGCTGGGATGACC | + |
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Preference number: 2 (lower is better) Translates to: QCQRSRLQCPTQLSGKPTHFRPL*AEAGMT Trigger: GGTCATCCCAGCTTCTGCTCAGAGGGGTCTGAAATG...GGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | ATGCCCTACCCAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCACTGGCCACAGGACAGAGTAAGGTGTaGACCCCACAGCACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: MPYPAQWKAHPDSQPLATGQSKV*TPQHSR Trigger: TCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCC...TGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGACTGGAGCACAGAACACGGCTAGCAGGAAACAACCTGCTGCCCTTGCTGGTGGGTAGAAAGTaGCAGCAGCCCTGGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SRGLEHRTRLAGNNLLPLLVGRK*QQPWGL Trigger: CAACCCCCAGGGCTGCTGCCACTTTCTACCCACCAG...CAAGGGCAGCAGGTTGTTTCCTGCTAGCCGTGTTCTGTGCTCCAGTCCTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTCTTACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTACAACCTGCTGCCCTTaGGGGAGCCCCAGTCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: QASYCSVWGSQDTQTSLATTCCP*GSPSLK Trigger: TTTTAGACTGGGGCTCCCTCAAGGGCAGCAGGTTGT...AGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTAAGAAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | TTGGCAGGCAGCTCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATGCTCAGGCTTCTTACTaGTCAGTCTGGGGCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LAGSSLKPTYSVRGAGCNAQASY*SVWGSQ Trigger: CTGAGAGCCCCAGACTGAGCAGTAAGAAGCCTGAGC...ATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGAGCTGCCTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR TCA 90 bp | TACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGTCTAAAAACAAGCTaGAGGAGCAGGGACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: YCSVWGSQDTQTSLAQQRSLKTS*RSRDLL Trigger: CAGGAGGTCCCTGCTCCTTCAGCTTGTTTTTAGACT...CCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCTACCCAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCACTGGCCACAATGTCAGCTCTATGCTaGCTCTGGGGTGGAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: MPYPAQWKAHPDSQPLATMSALC*LWGGNA Trigger: AGCATTTCCACCCCAGAGCCAGCATAGAGCTGACAT...TGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTGGGGTGGAAATGCTCCAAGAGAGGTGCCTGGCTTaGATAGGGGAGAGGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: TQALGCQLYAGSGVEMLQERCLA*IGERMS Trigger: ACTCATCCTCTCCCCTATCCAAGCCAGGCACCTCTC...TTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCTACCCAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCACTGGCCACAACCGCTCAGTCTTTATaGACCTTGAAAAATGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: MPYPAQWKAHPDSQPLATTAQSL*TLKNGD Trigger: GTCACCATTTTTCAAGGTCCATAAAGACTGAGCGGT...TGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CCA 90 bp | CGGCCACTCCCTCTACAGCTGAGGATGACATCTCTCTCACCCTCAGCCAAGGAGGAAATGCTCCAAGGCTaGAGTATAGGAAAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RPLPLQLRMTSLSPSAKEEMLQG*SIGKRR Trigger: TCTCCTCTTTCCTATACTCCAGCCTTGGAGCATTTC...CTCCTTGGCTGAGGGTGAGAGAGATGTCATCCTCAGCTGTAGAGGGAGTGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTCTTACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTAGTCTTTATGGACCTTaGAAAATGGTGACCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QASYCSVWGSQDTQTSLASLYGP*KMVTLS Trigger: GGAAAGGGTCACCATTTTTCAAGGTCCATAAAGACT...AGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTAAGAAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACATATCATGGTTCCTGTaGACAAAATCCCACTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: VSGDVDRVRCAPHSTAEDISWFL*TKSHCS Trigger: TGAACAGTGGGATTTTGTGCACAGGAACCATGATAT...GTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | GCTGGAGCTCACCCTCAGCAGGGCCCAGAACAGTGCTaGGGGGTTGGCAGGCAGCTCCCTGAAGCCCACCTA | + |
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Preference number: 3 (lower is better) Translates to: AGAHPQQGPEQC*GVGRQLPEAHL Trigger: TAGGTGGGCTTCAGGGAGCTGCCTGCCAACCCCCCAGCACTGTTCTGGGCCCTGCTGAGGGTGAGCTCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | CAGCTCAGTGGAAAGCCCACCCTGACAGCCAACCACTaGCCACAGGATGTGTCCGGGTCCCCAGGCTACAGT | + |
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Preference number: 3 (lower is better) Translates to: QLSGKPTLTANH*PQDVSGSPGYS Trigger: ACTGTAGCCTGGGGACCCGGACACATCCTGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 72 bp | TCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTaGAATGCCCTACCCAGCTCAGTGGAAAGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: SLKPTYSVRGAG*NALPSSVESPP Trigger: GGGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | TCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTaGAAAGCCCACCCTGACAGCCAACCACTGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SEEQAAMPYPAQ*KAHPDSQPLAT Trigger: TGTGGCCAGTGGTTGGCTGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 72 bp | GAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATaGCCTACCCAGCTCAGTGGAAAGCCCACCCTGACA | + |
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Preference number: 3 (lower is better) Translates to: EAHLQCQRSRLQ*PTQLSGKPTLT Trigger: TGTCAGGGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTCTACAGCTGAGGATGACATCTCTCTCACCCTCAGCCAAGGAGTGGAGGGGAGAGGTGCCTGGCTaGGATAGGGGAGAGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: LPLQLRMTSLSPSAKEWRGEVPG*DRGEDE Trigger: CTCATCCTCTCCCCTATCCAAGCCAGGCACCTCTCC...CCTCCACTCCTTGGCTGAGGGTGAGAGAGATGTCATCCTCAGCTGTAGAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR-3UTR CAA 90 bp | CGGCCACTCCCTCTACAGCTGAGGATGACATCTCTCTCACCCTCAGCCAAGGAGAACAACCTGCTGCCCTaGAGGGAGCCCCAGTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: RPLPLQLRMTSLSPSAKENNLLP*REPQSK Trigger: TTTAGACTGGGGCTCCCTCAAGGGCAGCAGGTTGTT...CTCCTTGGCTGAGGGTGAGAGAGATGTCATCCTCAGCTGTAGAGGGAGTGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | GCAACTCCTCCTGCCTCCACAACAAATAACAGTGGTTaGGTCTTCTACCTGTGGCTGCTGTGCTGGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ATPPASTTNNSG*VFYLWLLCWLG Trigger: CCCCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTGTGGAGGCAGGAGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | GGTCATTTGCTAGCTCAGGCTTCTTACTGCTCAGTCTaGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GHLLAQASYCSV*GSQDTQTSLAQ Trigger: CTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTAAGAAGCCTGAGCTAGCAAATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | TCCACAACAAATAACAGTGGTTGGGTCTTCTACCTGTaGCTGCTGTGCTGGCTGGGGTGTCAGGGGATGTGG | + |
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Preference number: 3 (lower is better) Translates to: STTNNSGWVFYL*LLCWLGCQGMW Trigger: CCACATCCCCTGACACCCCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR TCA 72 bp | CACAGGATGTGTCCGGGTCCCCAGGCTACAGTGGGGTaGCTAAAGTGGTCATTTGCTAGCTCAGGCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: HRMCPGPQATVG*LKWSFASSGFL Trigger: TAAGAAGCCTGAGCTAGCAAATGACCACTTTAGTCACCCCACTGTAGCCTGGGGACCCGGACACATCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CCA 72 bp | AACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTaGGGTGGAAATGCTCCAAGGCTGGAGTATAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NSSPRMSALCWL*GGNAPRLEYRK Trigger: TTTCCTATACTCCAGCCTTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR GCA 72 bp | AGTATCAAGTGTCACTACAGAACACTAAGTAGCTTATaGATTTTCCTAGACGTCATGGACTGTCTCGCAACT | + |
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Preference number: 3 (lower is better) Translates to: SIKCHYRTLSSL*IFLDVMDCLAT Trigger: AGTTGCGAGACAGTCCATGACGTCTAGGAAAATGCATAAGCTACTTAGTGTTCTGTAGTGACACTTGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR TCA 72 bp | TTTAAAAGAAAGATGGTGGTTTTCCTATTCAAGAGCTaGGGAAACACCGCTCAGTCTTTATGGACCTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: FKRKMVVFLFKS*GNTAQSLWTLK Trigger: TTTCAAGGTCCATAAAGACTGAGCGGTGTTTCCTCAGCTCTTGAATAGGAAAACCACCATCTTTCTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CCTGGGCAGACAAGGAGCTGGTGGGTAGAAAGTGGCAGCAGCCCTGGGGGTTGTCCACGACGAGCGCGTTaGCGGGCACCACGCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PGQTRSWWVESGSSPGGCPRRAR*RAPRPR Trigger: CCGAGGGCGTGGTGCCCGGCAACGCGCTCGTCGTGG...ACAACCCCCAGGGCTGCTGCCACTTTCTACCCACCAGCTCCTTGTCTGCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CAGGGACCTCCTGCTTACACAGCCCTGGGGCATCGGGCACAGGGGTGCCAGGGTGCTCCGGCTCCTTCTTaGGGCGGGCATCCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QGPPAYTALGHRAQGCQGAPAPS*GGHPCS Trigger: TGAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGC...ACCCTGGCACCCCTGTGCCCGATGCCCCAGGGCTGTGTAAGCAGGAGGTCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | GTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACTGTTCTGCGCGTACAGCTaGCGCAGCCCCTCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VRGCGQSKVCTPQHSRGLFCAYS*RSPSAT Trigger: GGTGGCCGAGGGGCTGCGGCAGCTGTACGCGCAGAA...CAGTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CAGGCTTCCTCTTACCAGCCCCAGACCACCCCAGGTCACAGGGCCTACTGCCTGATCCCCGGGAAGTCCTaGTCGATCAGGTGGCGGATG | + |
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Preference number: 4 (lower is better) Translates to: QASSYQPQTTPGHRAYCLIPGKS*SIRWRM Trigger: CATCCGCCACCTGATCGAGCAGGACTTCCCGGGGAT...CAGGCAGTAGGCCCTGTGACCTGGGGTGGTCTGGGGCTGGTAAGAGGAAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | AGCAGAGGACTGGAGCACAGAACACGGCTAGCAGGAAACAACCTGCTGCCCTTGCGTTGCCGAAGGCGTTaGGCTTGCGGAAGGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SRGLEHRTRLAGNNLLPLRCRRR*ACGRGA Trigger: GGCGCCCCTTCCGCAAGCTCAACGCCTTCGGCAACG...CAAGGGCAGCAGGTTGTTTCCTGCTAGCCGTGTTCTGTGCTCCAGTCCTCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | AGCAGAGGACTGGAGCACAGAACACGGCTAGCAGGAAACAACCTGCTGCCCTTGTGGGCTCCGGCCCGATaGGCATCCCCGGGAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRGLEHRTRLAGNNLLPLWAPAR*ASPGSP Trigger: AGGACTTCCCGGGGATGCGCATCGGGCCGGAGCCCA...CAAGGGCAGCAGGTTGTTTCCTGCTAGCCGTGTTCTGTGCTCCAGTCCTCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGGAGAGGAAGGAAATGACAGCGGCAGCAGCTTCTaGGCGTACAGCTGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTPRPPWLSRGGEEGNDSGSSF*AYSCRS Trigger: GCTGCGGCAGCTGTACGCGCAGAAGCTGCTGCCGCT...GTCATTTCCTTCCTCTCCTCCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGGAGAGGAAGGAAATGACCCCTCGGTGGGGCCGTaGATGACCGCGATGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRTPRPPWLSRGGEEGNDPSVGP*MTAMKE Trigger: CTCCTTCATCGCGGTCATGCACGGCCCCACCGAGGG...GTCATTTCCTTCCTCTCCTCCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | TACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGCCGGAGGAGATCTGGTaGTCCCGCTCGATCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCSVWGSQDTQTSLAQQRPEEIW*SRSIFW Trigger: CCAGAAGATCGAGCGGGAGCACCAGATCTCCTCCGG...CCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CTGACAGCCAACCACTGGCCACAGGATGTGTCCGGGTCCCCAGGCTACAGTGGGTGGGTTGGGCAGCTGTaGACACATGAACCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTANHWPQDVSGSPGYSGWVGQL*THEPVE Trigger: CTCAACAGGTTCATGTGTGCACAGCTGCCCAACCCA...CCCACTGTAGCCTGGGGACCCGGACACATCCTGTGGCCAGTGGTTGGCTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | TACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGATCAGGGACTCCTCCTaGCGCACCATCACCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCSVWGSQDTQTSLAQQRIRDSS*RTITIS Trigger: GCTGATGGTGATGGTGCGCCAGGAGGAGTCCCTGAT...CCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | TTGGCAGGCAGCTCCCTGAAGCCCACCTACAGTGTCAGAGGAGCAGGCTGCAATAGTCATAACCTCGGCTaGTGCGCTGCTTCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGSSLKPTYSVRGAGCNSHNLG*CAASPQ Trigger: CTGGGGAGAAGCAGCGCATCAGCCGAGGTTATGACT...ATTGCAGCCTGCTCCTCTGACACTGTAGGTGGGCTTCAGGGAGCTGCCTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CCTGTCGTGCTGCATGGACACTACACCCAGGCCAGAGCCACAGGCTTCCTCTTAACTCAACATCATCAATaGCCTCGCCAGCCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVVLHGHYTQARATGFLLTQHHQ*PRQPPR Trigger: GCGAGGGGGCTGGCGAGGGCATTGATGATGTTGAGT...TAAGAGGAAGCCTGTGGCTCTGGCCTGGGTGTAGTGTCCATGCAGCACGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | TCAGCCAGAAAGCAAACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTGGGCCCTCGGCCACCGTCTaGAAGAGCTCCGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SARKQTQALGCQLYAGSGPSATV*KSSGSF Trigger: GAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGG...CCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGTTTGCTTTCTGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CCTGGGCAGACAAGGAGCTGGTGGGTAGAAAGTGGCAGCAGCCCTGGGGGTTGTTTGGGCTTCAAGGCCTaGAACTTGCTGAAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGQTRSWWVESGSSPGGCLGFKA*NLLKSW Trigger: CCAGGACTTCAGCAAGTTCCAGGCCTTGAAGCCCAA...ACAACCCCCAGGGCTGCTGCCACTTTCTACCCACCAGCTCCTTGTCTGCCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | ACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTGGGGTGGAAATGCTCCAACGATCAGGTGGCGGATaGAGGTGGTCTTGCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQALGCQLYAGSGVEMLQRSGGG*RWSCRC Trigger: GCACCGGCAAGACCACCTTCATCCGCCACCTGATCG...TTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | CCTGTCGTGCTGCATGGACACTACACCCAGGCCAGAGCCACAGGCTTCCTCTTACGTCGAACAACAAGATaGTGCGGTCCACACGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVVLHGHYTQARATGFLLRRTTR*CGPHAL Trigger: CAGAGCGTGTGGACCGCATCATCTTGTTGTTCGACG...TAAGAGGAAGCCTGTGGCTCTGGCCTGGGTGTAGTGTCCATGCAGCACGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CAGGGACCTCCTGCTTACACAGCCCTGGGGCATCGGGCACAGGGGTGCCAGGGTCCAGCTCTTTCTTCTTaGTCTCTTTCCCGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGPPAYTALGHRAQGCQGPALSS*SLSRKH Trigger: ATGTTTTCGGGAAAGAGAGCAAGAAGAAAGAGCTGG...ACCCTGGCACCCCTGTGCCCGATGCCCCAGGGCTGTGTAAGCAGGAGGTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CCTGTCGTGCTGCATGGACACTACACCCAGGCCAGAGCCACAGGCTTCCTCTTAGATGCTGTCCAGTACTaGGTTGGGCAGCTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVVLHGHYTQARATGFLLDAVQY*VGQLCT Trigger: TGTGCACAGCTGCCCAACCCAGTACTGGACAGCATC...TAAGAGGAAGCCTGTGGCTCTGGCCTGGGTGTAGTGTCCATGCAGCACGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | GTGTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACGAGACTGGATGTCTTTaGAGAGGTCCTGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGDVDRVRCAPHSTAEDETGCL*RGPAPL Trigger: CAGAGGAGCAGGACCTCTTCAAAGACATCCAGTCTC...GTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | GTGTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACGTTTGGAGGGTGGAATaGGATGTGGAGGAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSGDVDRVRCAPHSTAEDVWRVE*DVEEGQ Trigger: CTGACCTTCCTCCACATCTCATTCCACCCTCCAAAC...GTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | CCTGTCGTGCTGCATGGACACTACACCCAGGCCAGAGCCACAGGCTTCCTCTTAAGGGCCCATTCATGGTaGCATCAAAAGCACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVVLHGHYTQARATGFLLRAHSW*HQKHHP Trigger: AGGGTGGTGCTTTTGATGGCACCATGAATGGGCCCT...TAAGAGGAAGCCTGTGGCTCTGGCCTGGGTGTAGTGTCCATGCAGCACGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | ACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTGGGGTGGAAATGCTCCAATCGCCGGAGGAGATCTaGTGCTCCCGCTCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQALGCQLYAGSGVEMLQSPEEI*CSRSIF Trigger: GAAGATCGAGCGGGAGCACCAGATCTCCTCCGGCGA...TTGGAGCATTTCCACCCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | TACTGCTCAGTCTGGGGCTCTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGCAAAGGGCCCATTCATaGTGCCATCAAAAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YCSVWGSQDTQTSLAQQRQRAHS*CHQKHH Trigger: GTGGTGCTTTTGATGGCACCATGAATGGGCCCTTTG...CCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAGAGCCCCAGACTGAGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CGGCCACTCCCTCTACAGCTGAGGATGACATCTCTCTCACCCTCAGCCAAGGAGCCTCCGTTTGGAGGGTaGAATGAGATGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLPLQLRMTSLSPSAKEPPFGG*NEMWRK Trigger: CTTCCTCCACATCTCATTCCACCCTCCAAACGGAGG...CTCCTTGGCTGAGGGTGAGAGAGATGTCATCCTCAGCTGTAGAGGGAGTGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR TCA 90 bp | TCAGCCAGAAAGCAAACTCAAGCCCTAGGATGTCAGCTCTATGCTGGCTCTGGGTCCGGTTGTCAGGGATaGGCAGTGGGTGTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SARKQTQALGCQLYAGSGSGCQG*AVGVTR Trigger: TCTGGTCACACCCACTGCTCATCCCTGACAACCGGA...CCCAGAGCCAGCATAGAGCTGACATCCTAGGGCTTGAGTTTGCTTTCTGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTGGAAAGCCCACCTTTCTCGGCAGAGACTaGATGTCTTTGAAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCQRSRLQCPTQLSGKPTFLGRD*MSLKRS Trigger: GGACCTCTTCAAAGACATCCAGTCTCTGCCGAGAAA...GGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGGAGAGGAAGGAAATGACCTGTATCCAGCAGCTTaGGCTTCAAGGCCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRTPRPPWLSRGGEEGNDLYPAA*ASRPGT Trigger: AGTTCCAGGCCTTGAAGCCCAAGCTGCTGGATACAG...GTCATTTCCTTCCTCTCCTCCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | GTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACTGATCCTTGTCCACATCTaGCAACTTCCAGATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRGCGQSKVCTPQHSRGLILVHI*QLPDLP Trigger: GGGAAGATCTGGAAGTTGGCAGATGTGGACAAGGAT...CAGTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CCACAACAAATAACAGTGGTTGGGTCTTCTACCTGTGGCTGCTGTGCTGGCTGGTCCTGCTCGATCAGGTaGCGGATGAAGGTGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQQITVVGSSTCGCCAGWSCSIR*RMKVVL Trigger: CAAGACCACCTTCATCCGCCACCTGATCGAGCAGGA...CCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTGGAAAGCCCACCAGATCTCATCATAGGTaGGCTTGTCCTTGCCAACTA | + |
|
Preference number: 4 (lower is better) Translates to: QCQRSRLQCPTQLSGKPTRSHHR*ACPCQL Trigger: TAGTTGGCAAGGACAAGCCCACCTATGATGAGATCT...GGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| 3UTR CAA 72 bp | CACAGAACACGGCTAGCAGGAAACAACCTGCTGCCCTaGAGGGAGCCCCAGTCTAAAAACAAGCTGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRTRLAGNNLLP*REPQSKNKLKE Trigger: CTCCTTCAGCTTGTTTTTAGACTGGGGCTCCCTCAAGGGCAGCAGGTTGTTTCCTGCTAGCCGTGTTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CCA 90 bp | CCACAACAAATAACAGTGGTTGGGTCTTCTACCTGTGGCTGCTGTGCTGGCTGGAACTTGCTGAAGTCCTaGGTCTGCAGGAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQQITVVGSSTCGCCAGWNLLKS*VCRSSC Trigger: GCAGGAACTCCTGCAGACCCAGGACTTCAGCAAGTT...CCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR GCA 90 bp | GGTGGTTTTCCTATTCAAGAGCTGAGGAAACACCGCTCAGTCTTTATGGACCTTCTGAAGTCCTGGGTCTaGAGGAGTTCCTGCATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GGFPIQELRKHRSVFMDLLKSWV*RSSCIL Trigger: TAAGATGCAGGAACTCCTGCAGACCCAGGACTTCAG...AAGGTCCATAAAGACTGAGCGGTGTTTCCTCAGCTCTTGAATAGGAAAACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS CCA 90 bp | AGCAGCTTCTGCGCGTACAGCTGCCGCAGCCCCTCGGCCACCGTCTaGAAGAGCTCCGGCTCCTTCTTGCGGCGGGCATCCTTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSFCAYSCRSPSATV*KSSGSFLRRASLLT Trigger: GGTGAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGGGCTGCGGCAGCTGTACGCGCAGAAGCTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CAGTGTCAGAGGAGCAGGCTGCAATGCCCTACCCAGCTCAGTGGAAAGCCCACCCCGAAGGCGTTGAGCTaGCGGAAGGGGCGCCGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCQRSRLQCPTQLSGKPTPKALS*RKGRRG Trigger: CCCGCGGCGCCCCTTCCGCAAGCTCAACGCCTTCGG...GGTGGGCTTTCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CTGACAGCCAACCACTGGCCACAGGATGTGTCCGGGTCCCCAGGCTACAGTGGGAGCTCCGGCTCCTTCTaGCGGCGGGCATCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTANHWPQDVSGSPGYSGSSGSF*RRASLL Trigger: GAGCAAGGATGCCCGCCGCAAGAAGGAGCCGGAGCT...CCCACTGTAGCCTGGGGACCCGGACACATCCTGTGGCCAGTGGTTGGCTGTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS GCA 90 bp | CGCCAGCCCCCTCGCCGTAGCCATGCCCAAAGGGCCCATTCATGGTaGCATCAAAAGCACCACCCTTCACAGCCTGTGAGGGCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPPRRSHAQRAHSW*HQKHHPSQPVRASG Trigger: CCCTGATGCCCTCACAGGCTGTGAAGGGTGGTGCTTTTGATGGCACCATGAATGGGCCCTTTGGGCATGGCTACGGCGAGGGGGCTGGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CCTGTCGTGCTGCATGGACACTACACCCAGGCCAGAGCCACAGGCTTCCTCTTAGCGTTGCCGAAGGCGTaGAGCTTGCGGAAGGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PVVLHGHYTQARATGFLLALPKA*SLRKGR Trigger: GCGCCCCTTCCGCAAGCTCAACGCCTTCGGCAACGC...TAAGAGGAAGCCTGTGGCTCTGGCCTGGGTGTAGTGTCCATGCAGCACGACAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS CCA 90 bp | CCTCGCCAGCCCCCTCGCCGTAGCCATGCCCAAAGGGCCCATTCATaGTGCCATCAAAAGCACCACCCTTCACAGCCTGTGAGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRQPPRRSHAQRAHS*CHQKHHPSQPVRAS Trigger: TGATGCCCTCACAGGCTGTGAAGGGTGGTGCTTTTGATGGCACCATGAATGGGCCCTTTGGGCATGGCTACGGCGAGGGGGCTGGCGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CCTGGGCAGACAAGGAGCTGGTGGGTAGAAAGTGGCAGCAGCCCTGGGGGTTGTTCGAAGAGCTTCCGGTaGTCAGGGATGAGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQTRSWWVESGSSPGGCSKSFR*SGMSSG Trigger: CCCACTGCTCATCCCTGACAACCGGAAGCTCTTCGA...ACAACCCCCAGGGCTGCTGCCACTTTCTACCCACCAGCTCCTTGTCTGCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS CCA 90 bp | AAAGCACCACCCTTCACAGCCTGTGAGGGCATCAGGGACTCCTCCTaGCGCACCATCACCATCAGCCGAGCTATATCGTTGGCCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: KAPPFTACEGIRDSS*RTITISRAISLASI Trigger: TATGCTGGCCAACGATATAGCTCGGCTGATGGTGATGGTGCGCCAGGAGGAGTCCCTGATGCCCTCACAGGCTGTGAAGGGTGGTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | GTCAGGGGATGTGGACAGAGTAAGGTGTGCACCCCACAGCACAGCAGAGGACTGTTCAAGGCCTGGAACTaGCTGAAGTCCTGGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRGCGQSKVCTPQHSRGLFKAWN*LKSWVC Trigger: GCAGACCCAGGACTTCAGCAAGTTCCAGGCCTTGAA...CAGTCCTCTGCTGTGCTGTGGGGTGCACACCTTACTCTGTCCACATCCCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CAACAAATAACAGTGGTTGGGTCTTCTACCTGTGGCTGCTGTGCTGGCTGGGGTAGCACCATCGGCTTGTaGTCGAAGTCAGCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QQITVVGSSTCGCCAGWGSTIGL*SKSASS Trigger: GGAGGACGCTGACTTCGACAACAAGCCGATGGTGCT...ACCCCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CTCAGGACACCCAGACCTCCTTGGCTCAGCAGAGGAGGAGAGGAAGGAAATGACACCAGCTCTTTCTTCTaGCTCTCTTTCCCGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRTPRPPWLSRGGEEGNDTSSFF*LSFPKT Trigger: TGTTTTCGGGAAAGAGAGCAAGAAGAAAGAGCTGGT...GTCATTTCCTTCCTCTCCTCCTCTGCTGAGCCAAGGAGGTCTGGGTGTCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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| CDS-3UTR CAA 90 bp | CCACAACAAATAACAGTGGTTGGGTCTTCTACCTGTGGCTGCTGTGCTGGCTGGTTAGCACCTGTGATCTaGCCGTTGACAGGAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQQITVVGSSTCGCCAGWLAPVI*PLTGDS Trigger: ACTGTCTCCTGTCAACGGCAAGATCACAGGTGCTAA...CCAGCCAGCACAGCAGCCACAGGTAGAAGACCCAACCACTGTTATTTGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS CCA 72 bp | TGCGCGTACAGCTGCCGCAGCCCCTCGGCCACCGTCTaGAAGAGCTCCGGCTCCTTCTTGCGGCGGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CAYSCRSPSATV*KSSGSFLRRAS Trigger: GGATGCCCGCCGCAAGAAGGAGCCGGAGCTCTTCCAGACGGTGGCCGAGGGGCTGCGGCAGCTGTACGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS GCA 72 bp | GTGGGCTCCGGCCCGATGCGCATCCCCGGGAAGTCCTaGTCGATCAGGTGGCGGATGAAGGTGGTCTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VGSGPMRIPGKS*SIRWRMKVVLP Trigger: CGGCAAGACCACCTTCATCCGCCACCTGATCGAGCAGGACTTCCCGGGGATGCGCATCGGGCCGGAGCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS CCA 72 bp | CCCCCTCGCCGTAGCCATGCCCAAAGGGCCCATTCATaGTGCCATCAAAAGCACCACCCTTCACAGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPRRSHAQRAHS*CHQKHHPSQPV Trigger: CACAGGCTGTGAAGGGTGGTGCTTTTGATGGCACCATGAATGGGCCCTTTGGGCATGGCTACGGCGAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS GCA 72 bp | CCTCGCCGTAGCCATGCCCAAAGGGCCCATTCATGGTaGCATCAAAAGCACCACCCTTCACAGCCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRRSHAQRAHSW*HQKHHPSQPVR Trigger: CCTCACAGGCTGTGAAGGGTGGTGCTTTTGATGGCACCATGAATGGGCCCTTTGGGCATGGCTACGGCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS GCA 72 bp | GCTTGTCCTTGCCAACTACCCACTCAACATCATCAATaGCCTCGCCAGCCCCCTCGCCGTAGCCATGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ACPCQLPTQHHQ*PRQPPRRSHAQ Trigger: TTGGGCATGGCTACGGCGAGGGGGCTGGCGAGGGCATTGATGATGTTGAGTGGGTAGTTGGCAAGGACAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS CCA 72 bp | CCCTTCACAGCCTGTGAGGGCATCAGGGACTCCTCCTaGCGCACCATCACCATCAGCCGAGCTATATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFTACEGIRDSS*RTITISRAISL Trigger: CAACGATATAGCTCGGCTGATGGTGATGGTGCGCCAGGAGGAGTCCCTGATGCCCTCACAGGCTGTGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
||
| CDS CAA 72 bp | AGCTCGTGGCCCTCTAGCTTCACCTTGATAAGGTGGTaGGCCAGGGCAAACTCCTCGTCATCCAGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSWPSSFTLIRW*ARANSSSSSRP Trigger: TGGCCTGCTGGATGACGAGGAGTTTGCCCTGGCCAACCACCTTATCAAGGTGAAGCTAGAGGGCCACGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025684.4 |
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