Pregenerated sensors for EGR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071341Ensembl transcript IDs: ENSMUST00000095759.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCTGAAGGGCGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGCTaGACTGCGGGTGGCCCCGGACGTGCGTGGAAGAGGCAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VLKGVSGGRFGGNWS*TAGGPGRAWKRQGG Trigger: CCCTCCCTGCCTCTTCCACGCACGTCCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACGCCCTTCAGCAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 90 bp | GAACCCGTGCTGAAGGGCGTGAGCGGCGGGCGCTTCGGGGGAAACTaGAGCTGGACTGCGGGTGGCCCCGGACGTGCGTGGAAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EPVLKGVSGGRFGGN*SWTAGGPGRAWKRQ Trigger: CTGCCTCTTCCACGCACGTCCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACGCCCTTCAGCACGGGTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 90 bp | CTGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTaGAGGAAGGCGGCTCCCGAACAGCGGGCGCTGTCCGCGGAACCC | + |
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Preference number: 1 (lower is better) Translates to: LFCGWTERTVPREAG*RKAAPEQRALSAEP Trigger: GGGTTCCGCGGACAGCGCCCGCTGTTCGGGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 90 bp | ACAAAAACACTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTGGGTaGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCG | + |
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Preference number: 1 (lower is better) Translates to: TKTLSSVPRKCLFCG*TERTVPREAGWRKA Trigger: CGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR GCA 90 bp | GGGCGTACGCCAGTTACAAAAACACTTTCTTCAGTCCCAAGGAAGTaGCTGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GRTPVTKTLSSVPRK*LFCGWTERTVPREA Trigger: AGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAACTGGCGTACGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 90 bp | ACAAAGTTCTTAAGAGACCGGCTCGGTACATCCCCAGCTTGTCTCTaGGGAGGGATAAAGAGGAAGGCGTGGGGCGTACGCCAGTTACAA | + |
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Preference number: 1 (lower is better) Translates to: TKFLRDRLGTSPACL*GGIKRKAWGVRQLQ Trigger: TTGTAACTGGCGTACGCCCCACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGGTCTCTTAAGAACTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 90 bp | AGTTACAAAAACACTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTaGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SYKNTFFSPKEVPVL*VDREDCPQRGWLEE Trigger: TTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGTGCCTGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGGGGTGGCCCCGGACGTaGGTGGAAGAGGCAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KEVPVLWVDREDCPQRGWGWPRT*VEEAGR Trigger: CCTCCCTGCCTCTTCCACGCACGTCCGGGGCCACCC...CCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR-3UTR CCA 90 bp | CCGGCTCGGTACATCCCCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGGCGTGCGCTTCGGGGGAAACTaGAGCTGGACTGCGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PARYIPSLSLGRDKEEGVRFGGN*SWTAGG Trigger: GCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCG...CACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR-3UTR CCA 90 bp | CATCCAAAGACTTGCTGTACAAAGTTCTTAAGAGACCGGCTCGGTACATCCCCATGTCCCCAGAGAGGCTaGCTGGAGGAAGGCGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: HPKTCCTKFLRDRLGTSPCPQRG*LEEGGS Trigger: GGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACA...TGGGGATGTACCGAGCCGGTCTCTTAAGAACTTTGTACAGCAAGTCTTTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | GGCGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGCTaGACTGCGGGTGGCCCCGGACGTGCGTGGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GVSGGRFGGNWS*TAGGPGRAWKR Trigger: CCTCTTCCACGCACGTCCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | CTGAAGGGCGTGAGCGGCGGGCGCTTCGGGGGAAACTaGAGCTGGACTGCGGGTGGCCCCGGACGTGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: LKGVSGGRFGGN*SWTAGGPGRAW Trigger: CCACGCACGTCCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACGCCCTTCAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | GGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTaGAGGAAGGCGGCTCCCGAACAGCGGGCGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: GWTERTVPREAG*RKAAPEQRALS Trigger: GGACAGCGCCCGCTGTTCGGGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | CTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTaGCTGGAGGAAGGCGGCTCCCGAACAGCGGGCGCT | + |
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Preference number: 3 (lower is better) Translates to: LWVDREDCPQRG*LEEGGSRTAGA Trigger: AGCGCCCGCTGTTCGGGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | CTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTGGGTaGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LSSVPRKCLFCG*TERTVPREAGW Trigger: CCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | TTAAGAGACCGGCTCGGTACATCCCCAGCTTGTCTCTaGGGAGGGATAAAGAGGAAGGCGTGGGGCGTACGC | + |
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Preference number: 3 (lower is better) Translates to: LRDRLGTSPACL*GGIKRKAWGVR Trigger: GCGTACGCCCCACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGGTCTCTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR GCA 72 bp | CCAGTTACAAAAACACTTTCTTCAGTCCCAAGGAAGTaGCTGTTCTGTGGGTGGACCGAGAGGACTGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PVTKTLSSVPRK*LFCGWTERTVP Trigger: GGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CCA 72 bp | CCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGGCGTaGGGCGTACGCCAGTTACAAAAACACTTTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PACLWGGIKRKA*GVRQLQKHFLQ Trigger: CTGAAGAAAGTGTTTTTGTAACTGGCGTACGCCCCACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR GCA 72 bp | AATAACCCCAAAGCAAAAACATCACATCCAAAGACTTaGTGTACAAAGTTCTTAAGAGACCGGCTCGGTACA | + |
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Preference number: 3 (lower is better) Translates to: NNPKAKTSHPKT*CTKFLRDRLGT Trigger: TGTACCGAGCCGGTCTCTTAAGAACTTTGTACAGCAAGTCTTTGGATGTGATGTTTTTGCTTTGGGGTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR TCA 90 bp | GGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCGCGTGCGCCGAGCACGGCAGGCGAAGGCCTTaGCGTGCGGCCGCGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGQRGTRDRPDRAACAEHGRRRP*RAAAGR Trigger: TCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCC...GTGCTCGGCGCACGCGGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR TCA 90 bp | AGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCGCGTGCGAGCTGCCGCTGTAGCTaGGGCCCGAAGGGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RGREGSGERGTGRTVPRASCRCS*GPKGAW Trigger: CCACGCCCCCTTCGGGCCTCAGCTACAGCGGCAGCT...CGCACGCGGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR TCA 90 bp | GCGTGGAAGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCCCCGCAGCCCTGGCTTaGCGTCGGGCGGGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: AWKRQGGQRGTRDRPDRAPAALA*RRAGRA Trigger: AGCTCTCCCCGCCCGACGTCAAGCCAGGGCTGCGGG...GGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCTTCCACGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | CGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGCTGGACTGCGGGTGGCCCCGGGGCCCGAAGGGGGCGTaGGTGCAGGGCCCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RERRALRGKLELDCGWPRGPKGA*VQGPPG Trigger: TCCTGGAGGGCCCTGCACCCACGCCCCCTTCGGGCC...CCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | GCGTGGAAGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCAGAAGCAGCGCGCGCTaGACTTGCCGCCCCGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: AWKRQGGQRGTRDRPDRARSSAR*TCRPGV Trigger: GACGCCGGGGCGGCAAGTGCAGCGCGCGCTGCTTCT...GGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCTTCCACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCGCGTGCGTCGGGCGGGGAGAGCTaGGGCTCGAACAGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: RGREGSGERGTGRTVPRASGGES*GSNRHC Trigger: GCAGTGCCTGTTCGAGCCCCAGCTCTCCCCGCCCGA...CGCACGCGGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | GCCCCGGACGTGCGTGGAAGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCAGCGGGCCTCCGGGGTaGTCTGGAAGCTCCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: APDVRGRGREGSGERGTGSGPPG*SGSSPA Trigger: CGCAGGGGAGCTTCCAGACCACCCCGGAGGCCCGCT...GCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCTTCCACGCACGTCCGGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGCTGGACTGCGGGTGGCCCCGGGCGAAGGCCTTGACGTaGGGCCGCGGGCAGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RERRALRGKLELDCGWPRAKALT*GRGQKQ Trigger: CTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGC...CCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | TCCGCGGAACCCGTGCTGAAGGGCGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGGCGCCCGCAGCCCTaGCTTGACGTCGGGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SAEPVLKGVSGGRFGGNWRRPQP*LDVGRG Trigger: TCCCCGCCCGACGTCAAGCCAGGGCTGCGGGCGCCT...CCAGTTTCCCCCGAAGCGCCCGCCGCTCACGCCCTTCAGCACGGGTTCCGCGGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CGTGAGCGGCGGGCGCTTCGGGGGAAACTGGAGCTGGACTGCGGGTGGCCCCGGCCCCGGCGCCGCAGCTaGTCAAAGCCCAGCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RERRALRGKLELDCGWPRPRRRS*SKPSSR Trigger: TCTTGAGCTGGGCTTTGAGCAGCTGCGGCGCCGGGG...CCGGGGCCACCCGCAGTCCAGCTCCAGTTTCCCCCGAAGCGCCCGCCGCTCACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | AGAGGCAGGGAGGGCAGCGGGGAACGAGGGACCGGCCGGACCGTGCCGCGTGCGGTTTCTTCTCGTCACTaGGCGCGAAGCGGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGREGSGERGTGRTVPRAVSSRH*ARSGGH Trigger: GTGGCCGCCGCTTCGCGCGCAGTGACGAGAAGAAAC...CGCACGCGGCACGGTCCGGCCGGTCCCTCGTTCCCCGCTGCCCTCCCTGCCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | ACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCGGCTCCCGAACAGAGGGCCTCCGGGTCGTaGGGGTGTTCGGGAACCGCC | + |
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Preference number: 4 (lower is better) Translates to: TERTVPREAGWRKAAPEQRASGS*GCSGTA Trigger: GGCGGTTCCCGAACACCCGCACGACCCGGAGGCCCT...CTGTTCGGGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCGGCGGGACCGGGGAAGGGTaGCAGGCCCAAGATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LWVDREDCPQRGWLEEGGGTGEG*QAQDAR Trigger: TCTGGCATCTTGGGCCTGGCACCCTTCCCCGGTCCC...GCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CCGGCTCGGTACATCCCCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGGCGTGAGCGCGCGCTGCACTTaGCGCCCCGGCGTCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PARYIPSLSLGRDKEEGVSARCT*RPGVPC Trigger: GCAAGGGACGCCGGGGCGGCAAGTGCAGCGCGCGCT...CACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | GAAGGCGGCTCCCGAACAGCGGGCGCTGTCCGCGGAACCCGTGCTGAAGGGCGTTGTTCGGGAACCGCCTaGATGAAGAAGCTGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: EGGSRTAGAVRGTRAEGRCSGTA*MKKLPL Trigger: CAGCGGCAGCTTCTTCATCCAGGCGGTTCCCGAACA...ACGCCCTTCAGCACGGGTTCCGCGGACAGCGCCCGCTGTTCGGGAGCCGCCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTGCCTGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTCGAAGGGGGCGTGGGTaGAGGGCCCTCCAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GSACSVGGPRGLSPERLARRGRG*RALQEA Trigger: TGCTTCCTGGAGGGCCCTGCACCCACGCCCCCTTCG...AGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACAGGCACTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCGGCTCCGCGCGCGCCTTCTaGTTTAGGTGCACCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWVDREDCPQRGWLEEGGSARAF*FRCTLL Trigger: CAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGA...GCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | TGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGGGGCGCAGCCTTCGGTaGGCTTGGAGAGAAGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: CSVGGPRGLSPERLAGGRGRSLR*AWREAR Trigger: ACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCC...CCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCGGCTCGGTACATCCCCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGAGCAGCGTCCAGCGCTaGCGAAGCGGGAGGCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RDRLGTSPACLWGGIKRKSSVQR*RSGRRP Trigger: CGGGCGCCTCCCGCTTCGCCAGCGCTGGACGCTGCT...CTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGGTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | CGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCGGCTCCCGAACAGCGAGGTGCACCTTGCTGTaGCGTTTCTTCTCGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: REDCPQRGWLEEGGSRTARCTLL*RFFSSL Trigger: CAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCT...CGCTGTTCGGGAGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | AGAGACCGGCTCGGTACATCCCCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGCGGCCACCAGGGGTTTaGAGAAGTCCGCCGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RDRLGTSPACLWGGIKRKRPPGV*RSPPWR Trigger: CCGCCACGGCGGACTTCTCCAAACCCCTGGTGGCCG...CTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGGTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | TGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGCGGCTGCTTTAGGTGCACCTTaGTGTGCCGTTTCTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: CGWTERTVPREAGWRKAAALGAP*CAVSSR Trigger: ACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGC...AGCCGCCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR TCA 90 bp | TTACAAAAACACTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTGGGTGGACCGGCTCGGCGGGGCAGCTaGTGGACAGCAGGTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LQKHFLQSQGSACSVGGPARRGS*WTAGPR Trigger: TCGAGGACCTGCTGTCCATCAGCTGCCCCGCCGAGC...CGGTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| 3UTR CAA 72 bp | AAAGTTCTTAAGAGACCGGCTCGGTACATCCCCAGCTaGTCTCTGGGGAGGGATAAAGAGGAAGGCGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KVLKRPARYIPS*SLGRDKEEGVG Trigger: CCCCACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGGTCTCTTAAGAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR TCA 90 bp | AAAGAGGAAGGCGTGGGGCGTACGCCAGTTACAAAAACACTTTCTTCAGTCCCAGGGCATAGGGCCCTTTaGAGGCTGAAGCAGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: KEEGVGRTPVTKTLSSVPGHRAL*RLKQQR Trigger: ACGCTGCTGCTTCAGCCTTCAAAGGGCCCTATGCCC...TGGGACTGAAGAAAGTGTTTTTGTAACTGGCGTACGCCCCACGCCTTCCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CCA 90 bp | AGTTACAAAAACACTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTGGGTGGACGGCCGAACTCAGATCTaGGGAGTAGAGGTCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SYKNTFFSPKEVPVLWVDGRTQI*GVEVRQ Trigger: CTGCCGGACCTCTACTCCCCAGATCTGAGTTCGGCC...GTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR GCA 90 bp | AAAGAGGAAGGCGTGGGGCGTACGCCAGTTACAAAAACACTTTCTTCAGTCCCAGCCTTCTGCTTTAGGTaGACCTTGCTGTGCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: KEEGVGRTPVTKTLSSVPAFCFR*TLLCRF Trigger: GAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGC...TGGGACTGAAGAAAGTGTTTTTGTAACTGGCGTACGCCCCACGCCTTCCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 90 bp | GCGGGAGGCGCCCGCAGCCCTGGCTTGACGTCGGGCGGGGAGAGCTaGGGCTCGAACAGGCACTGCGAGGGAGCGCCCGCCGAAGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: AGGARSPGLTSGGES*GSNRHCEGAPAEGA Trigger: AGCGCCTTCGGCGGGCGCTCCCTCGCAGTGCCTGTTCGAGCCCCAGCTCTCCCCGCCCGACGTCAAGCCAGGGCTGCGGGCGCCTCCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 90 bp | GAGAAGTCCGCCGTGGCGGCACCGCGCAGGCCTAGAGGGGACAGCTaGGCCGGAGGGGCGGCCAGGAACTCTCCGCCTTCGCCGCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: EKSAVAAPRRPRGDS*AGGAARNSPPSPPL Trigger: GAGCGGCGGCGAAGGCGGAGAGTTCCTGGCCGCCCCTCCGGCGCAGCTGTCCCCTCTAGGCCTGCGCGGTGCCGCCACGGCGGACTTCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 90 bp | GCGCGAAGCTCCGCACGCAGCTCTCCACCGGGCAGGCGAAGGCCTTaGCGTGCGGCCGCGGGCAGAAGCAGCGCGCGCTGCACTTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ARSSARSSPPGRRRP*RAAAGRSSARCTCR Trigger: GCGGCAAGTGCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGTGCGGAGCTTCGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 90 bp | AAGCTCCGCACGCAGCTCTCCACCGGGCAGGCGAAGGCCTTGACGTaGGGCCGCGGGCAGAAGCAGCGCGCGCTGCACTTGCCGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: KLRTQLSTGQAKALT*GRGQKQRALHLPPR Trigger: CCGGGGCGGCAAGTGCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGTGCGGAGCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 90 bp | GAGGGAGCGTCCCTAGCAGGCAGCCGGGGCAGCTCGGGGCTGGCGTaGGCGCAGCCTTCGGTGGGCTTGGAGAGAAGCGCGTCGGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: EGASLAGSRGSSGLA*AQPSVGLERSASEP Trigger: CGGCTCCGACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCCACGCCAGCCCCGAGCTGCCCCGGCTGCCTGCTAGGGACGCTCCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 90 bp | CCGGGACCCCGGCCGACAGCAGCTCCCAGGGGGCATAGGGCCCTTTaGAGGCTGAAGCAGCAGCGTCCAGCGCTGGCGAAGCGGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PGPRPTAAPRGHRAL*RLKQQRPALAKREA Trigger: CGCCTCCCGCTTCGCCAGCGCTGGACGCTGCTGCTTCAGCCTTCAAAGGGCCCTATGCCCCCTGGGAGCTGCTGTCGGCCGGGGTCCCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 90 bp | GCCGGGGCAGCTCGGGGCTGGCGTGGGCGCAGCCTTCGGTGGGCTTaGAGAGAAGCGCGTCGGAGCCGGAGAAGTCGCTCAGGTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: AGAARGWRGRSLRWA*REARRSRRSRSGGA Trigger: TGCTCCACCTGAGCGACTTCTCCGGCTCCGACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCCACGCCAGCCCCGAGCTGCCCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 90 bp | CAGGCAGCCGGGGCAGCTCGGGGCTGGCGTGGGCGCAGCCTTCGGTaGGCTTGGAGAGAAGCGCGTCGGAGCCGGAGAAGTCGCTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: QAAGAARGWRGRSLR*AWREARRSRRSRSG Trigger: ACCTGAGCGACTTCTCCGGCTCCGACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCCACGCCAGCCCCGAGCTGCCCCGGCTGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 90 bp | CCTGGTAGAGTCTGGCGGCCGGGCCGGGCAGCTCGGCGGGGCAGCTaGTGGACAGCAGGTCCTCGACCTTGGTCCCTACTGCAGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: PGRVWRPGRAARRGS*WTAGPRPWSLLQRS Trigger: GCTTCTCTGCAGTAGGGACCAAGGTCGAGGACCTGCTGTCCATCAGCTGCCCCGCCGAGCTGCCCGGCCCGGCCGCCAGACTCTACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 90 bp | CTGGGGCTCGAACAGGCACTGCGAGGGAGCGCCCGCCGAAGGCGCTaGCTCCCAAAACGCCTCCGGAAAGGCGGCCGAACTCAGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: LGLEQALRGSARRRR*LPKRLRKGGRTQIW Trigger: CCAGATCTGAGTTCGGCCGCCTTTCCGGAGGCGTTTTGGGAGGCAGCGCCTTCGGCGGGCGCTCCCTCGCAGTGCCTGTTCGAGCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGGCCCGCAGCCCTGGCTaGACGTCGGGCGGGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: CSVGGPRGLSPERLAGGRARSPG*TSGGES Trigger: GCTCTCCCCGCCCGACGTCAAGCCAGGGCTGCGGGC...CCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 90 bp | ACAGCGCGGCGAAGGAGAGGCCCAGCGAGTAGAAGCCCAGGCCCTTaGGGCGCTCCTCCGCGCGCGCCTTCTGCTTTAGGTGCACCTTGC | + |
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Preference number: 5 (lower is better) Translates to: TARRRRGPASRSPGP*GAPPRAPSALGAPC Trigger: GCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCTCAAGGGCCTGGGCTTCTACTCGCTGGGCCTCTCCTTCGCCGCGCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CAA 90 bp | CCGGCTCGGTACATCCCCAGCTTGTCTCTGGGGAGGGATAAAGAGGAAGGCGTGGGGCAGGCGAAGGCCTaGACGTGCGGCCGCGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PARYIPSLSLGRDKEEGVGQAKA*TCGRGQ Trigger: CTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCC...CACGCCTTCCTCTTTATCCCTCCCCAGAGACAAGCTGGGGATGTACCGAGCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 90 bp | AGGCGCTCCTCCGCGCGCGCCTTCTGCTTTAGGTGCACCTTGCTGTaGCGTTTCTTCTCGTCACTGCGCGCGAAGCGGCGGCCACACACG | + |
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Preference number: 5 (lower is better) Translates to: RRSSARAFCFRCTLL*RFFSSLRAKRRPHT Trigger: CGTGTGTGGCCGCCGCTTCGCGCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 90 bp | CCCAGGCCCTTGAGGCGCTCCTCCGCGCGCGCCTTCTGCTTTAGGTaGACCTTGCTGTGCCGTTTCTTCTCGTCACTGCGCGCGAAGCGG | + |
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Preference number: 5 (lower is better) Translates to: PRPLRRSSARAFCFR*TLLCRFFSSLRAKR Trigger: CCGCTTCGCGCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCTCAAGGGCCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTGGGTGGACCGAGAGGACTGTCCCCAGAGAGGCTGGCTGGAGGAAGGTGCTTTAGGTGCACCTaGCTGTGCCGTTTCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: CSVGGPRGLSPERLAGGRCFRCT*LCRFFS Trigger: CGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCA...CCTTCCTCCAGCCAGCCTCTCTGGGGACAGTCCTCTCGGTCCACCCACAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CAA 90 bp | AGTTACAAAAACACTTTCTTCAGTCCCAAGGAAGTGCCTGTTCTGTGGGTGGACTCGGCCACCAGGGGTTaGGAGAAGTCCGCCGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SYKNTFFSPKEVPVLWVDSATRG*EKSAVA Trigger: CGCCACGGCGGACTTCTCCAAACCCCTGGTGGCCGA...GTCCACCCACAGAACAGGCACTTCCTTGGGACTGAAGAAAGTGTTTTTGTAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS-3UTR CAA 90 bp | CATCCAAAGACTTGCTGTACAAAGTTCTTAAGAGACCGGCTCGGTACATCCCCAATGCCAGACATGAGGTaGAAGAGGGCCTCCGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: HPKTCCTKFLRDRLGTSPMPDMR*KRASGS Trigger: CGACCCGGAGGCCCTCTTCAACCTCATGTCTGGCAT...TGGGGATGTACCGAGCCGGTCTCTTAAGAACTTTGTACAGCAAGTCTTTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | CGTGCGGCCGCGGGCAGAAGCAGCGCGCGCTGCACTTaGCGCCCCGGCGTCCCTTGCGTCGGGCTTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RAAAGRSSARCT*RPGVPCVGLWP Trigger: CGGCCAAAGCCCGACGCAAGGGACGCCGGGGCGGCAAGTGCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 72 bp | GCCCGCAGCCCTGGCTTGACGTCGGGCGGGGAGAGCTaGGGCTCGAACAGGCACTGCGAGGGAGCGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ARSPGLTSGGES*GSNRHCEGAPA Trigger: GGCGGGCGCTCCCTCGCAGTGCCTGTTCGAGCCCCAGCTCTCCCCGCCCGACGTCAAGCCAGGGCTGCGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 72 bp | TCCGCACGCAGCTCTCCACCGGGCAGGCGAAGGCCTTaGCGTGCGGCCGCGGGCAGAAGCAGCGCGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SARSSPPGRRRP*RAAAGRSSARC Trigger: GCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGTGCGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 72 bp | CTCCGCACGCAGCTCTCCACCGGGCAGGCGAAGGCCTaGACGTGCGGCCGCGGGCAGAAGCAGCGCGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRTQLSTGQAKA*TCGRGQKQRAL Trigger: CAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGTGCGGAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 90 bp | CGCGCGAAGCTCCGCACGCAGCTCTCCACCGGGCAGGCGAAGGCCTaGACGTGCGGCCGCGGGCAGAAGCAGCGCGCGCTGCACTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RAKLRTQLSTGQAKA*TCGRGQKQRALHLP Trigger: CGGCAAGTGCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGTGCGGAGCTTCGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 90 bp | AGCCGGGGCAGCTCGGGGCTGGCGTGGGCGCAGCCTTCGGTGGGCTaGGAGAGAAGCGCGTCGGAGCCGGAGAAGTCGCTCAGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRGSSGLAWAQPSVG*ERSASEPEKSLRWS Trigger: GCTCCACCTGAGCGACTTCTCCGGCTCCGACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCCACGCCAGCCCCGAGCTGCCCCGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | ACGCAGCTCTCCACCGGGCAGGCGAAGGCCTTGACGTaGGGCCGCGGGCAGAAGCAGCGCGCGCTGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: TQLSTGQAKALT*GRGQKQRALHL Trigger: CAAGTGCAGCGCGCGCTGCTTCTGCCCGCGGCCGCACGTCAAGGCCTTCGCCTGCCCGGTGGAGAGCTGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 72 bp | GGGGCAGCTCGGGGCTGGCGTGGGCGCAGCCTTCGGTaGGCTTGGAGAGAAGCGCGTCGGAGCCGGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GAARGWRGRSLR*AWREARRSRRS Trigger: ACTTCTCCGGCTCCGACGCGCTTCTCTCCAAGCCCACCGAAGGCTGCGCCCACGCCAGCCCCGAGCTGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 72 bp | GGAGATCGGCCACCAGGGGTTTGGAGAAGTCCGCCGTaGCGGCACCGCGCAGGCCTAGAGGGGACAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GDRPPGVWRSPP*RHRAGLEGTAA Trigger: CGCAGCTGTCCCCTCTAGGCCTGCGCGGTGCCGCCACGGCGGACTTCTCCAAACCCCTGGTGGCCGATCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 90 bp | CCGGGCAGCTCGGCGGGGCAGCTGATGGACAGCAGGTCCTCGACCTaGGTCCCTACTGCAGAGAAGCGGGCCTCCGGGGTGGTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGSSAGQLMDSRSST*VPTAEKRASGVVWK Trigger: CTTCCAGACCACCCCGGAGGCCCGCTTCTCTGCAGTAGGGACCAAGGTCGAGGACCTGCTGTCCATCAGCTGCCCCGCCGAGCTGCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | GAACAGGCACTGCGAGGGAGCGCCCGCCGAAGGCGCTaGCTCCCAAAACGCCTCCGGAAAGGCGGCCGAACT | + |
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Preference number: 6 (lower is better) Translates to: EQALRGSARRRR*LPKRLRKGGRT Trigger: AGTTCGGCCGCCTTTCCGGAGGCGTTTTGGGAGGCAGCGCCTTCGGCGGGCGCTCCCTCGCAGTGCCTGTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 90 bp | TCGGGACCGGGGAAGGGTGCCAGGCCCAAGATGCCAGACATGAGGTaGAAGAGGGCCTCCGGGTCGTGCGGGTGTTCGGGAACCGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGPGKGARPKMPDMR*KRASGSCGCSGTAW Trigger: CCAGGCGGTTCCCGAACACCCGCACGACCCGGAGGCCCTCTTCAACCTCATGTCTGGCATCTTGGGCCTGGCACCCTTCCCCGGTCCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 72 bp | CAGCAGCTCCCAGGGGGCATAGGGCCCTTTGAAGGCTaGAGCAGCAGCGTCCAGCGCTGGCGAAGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QQLPGGIGPFEG*SSSVQRWRSGR Trigger: CCTCCCGCTTCGCCAGCGCTGGACGCTGCTGCTTCAGCCTTCAAAGGGCCCTATGCCCCCTGGGAGCTGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS TCA 72 bp | CGGCCGACAGCAGCTCCCAGGGGGCATAGGGCCCTTTaGAGGCTGAAGCAGCAGCGTCCAGCGCTGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RPTAAPRGHRAL*RLKQQRPALAK Trigger: CTTCGCCAGCGCTGGACGCTGCTGCTTCAGCCTTCAAAGGGCCCTATGCCCCCTGGGAGCTGCTGTCGGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 72 bp | TCGGCGGGGCAGCTGATGGACAGCAGGTCCTCGACCTaGGTCCCTACTGCAGAGAAGCGGGCCTCCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SAGQLMDSRSST*VPTAEKRASGV Trigger: CACCCCGGAGGCCCGCTTCTCTGCAGTAGGGACCAAGGTCGAGGACCTGCTGTCCATCAGCTGCCCCGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CAA 90 bp | CCCTTGAGGCGCTCCTCCGCGCGCGCCTTCTGCTTTAGGTGCACCTaGCTGTGCCGTTTCTTCTCGTCACTGCGCGCGAAGCGGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLRRSSARAFCFRCT*LCRFFSSLRAKRRP Trigger: TGGCCGCCGCTTCGCGCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCTCAAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | TCCGCGCGCGCCTTCTGCTTTAGGTGCACCTTGCTGTaGCGTTTCTTCTCGTCACTGCGCGCGAAGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SARAFCFRCTLL*RFFSSLRAKRR Trigger: CCGCCGCTTCGCGCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | CCCAGGCCCTTGAGGCGCTCCTCCGCGCGCGCCTTCTaGTTTAGGTGCACCTTGCTGTGCCGTTTCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PRPLRRSSARAF*FRCTLLCRFFS Trigger: CGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCTCAAGGGCCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS CCA 72 bp | CCAAAACGCCTCCGGAAAGGCGGCCGAACTCAGATCTaGGGAGTAGAGGTCCGGCAGCAAGGCATCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PKRLRKGGRTQI*GVEVRQQGIGA Trigger: GGCCCCGATGCCTTGCTGCCGGACCTCTACTCCCCAGATCTGAGTTCGGCCGCCTTTCCGGAGGCGTTTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | GCTCCTCCGCGCGCGCCTTCTGCTTTAGGTGCACCTTaGTGTGCCGTTTCTTCTCGTCACTGCGCGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: APPRAPSALGAP*CAVSSRHCARS Trigger: GCTTCGCGCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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| CDS GCA 72 bp | TTGAGGCGCTCCTCCGCGCGCGCCTTCTGCTTTAGGTaGACCTTGCTGTGCCGTTTCTTCTCGTCACTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LRRSSARAFCFR*TLLCRFFSSLR Trigger: GCGCAGTGACGAGAAGAAACGGCACAGCAAGGTGCACCTAAAGCAGAAGGCGCGCGCGGAGGAGCGCCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095759.5 |
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