Pregenerated sensors for EGR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033730Ensembl transcript IDs: ENSMUST00000035908.3, ENSMUST00000225200.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTaGGGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCC | + |
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Preference number: 1 (lower is better) Translates to: ARTHSRASPHASARA*GGQQALRFGALLTP Trigger: GGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR TCA 90 bp | GCCGCACGTCCAGGGCGAGATCAGGGCGCGGCCCCTGCGCCTCAGTaGCTGGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: AARPGRDQGAAPAPQ*LAFPSAFRRPARRH Trigger: GTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCCAGTCACTGAGGCGCAGGGGCCGCGCCCTGATCTCGCCCTGGACGTGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 90 bp | GCGAGCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTaGGTGCGGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: ASTHTLARITARKRA*VRRAASSALWCAPY Trigger: GTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGCTCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | CACGTCCAGGGCGAGATCAGGGCGCGGCCCCTGCGCCTCAGTGACTaGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGA | + |
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Preference number: 1 (lower is better) Translates to: HVQGEIRARPLRLSD*LSPLLSGDQPGGTG Trigger: TCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCCAGTCACTGAGGCGCAGGGGCCGCGCCCTGATCTCGCCCTGGACGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR TCA 90 bp | GTCCTTGGCGTGGCTCAGCGGCCCCTGGATCAAGGCGATCCTAACTaGACAAAGCGGGCTAGACGCCACCTTTCCGCCCCCACGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VLGVAQRPLDQGDPN*TKRARRHLSAPTPW Trigger: CCAAGGCGTGGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGTTCAGTTAGGATCGCCTTGATCCAGGGGCCGCTGAGCCACGCCAAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | CCGCCTTCAGTCCCCCGTAGGTCCTTGGCGTGGCTCAGCGGCCCCTaGATCAAGGCGATCCTAACTGAACAAAGCGGGCTAGACGCCACC | + |
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Preference number: 1 (lower is better) Translates to: PPSVPRRSLAWLSGP*IKAILTEQSGLDAT Trigger: GGTGGCGTCTAGCCCGCTTTGTTCAGTTAGGATCGCCTTGATCCAGGGGCCGCTGAGCCACGCCAAGGACCTACGGGGGACTGAAGGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR TCA 90 bp | AAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCTGAGAAGAGGTaGGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: KGWTGQLGLRAPEKR*GRAGRCDGAMEQMC Trigger: GCACATCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 90 bp | AGGGGTAGACACAGCCCAGTTCAGCTCAAGAGTCTCACACACGCGTaGGCGCGCGCACACACCGCACTCACTCACACACACACACATACA | + |
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Preference number: 1 (lower is better) Translates to: RGRHSPVQLKSLTHA*ARAHTALTHTHTHT Trigger: TGTATGTGTGTGTGTGTGAGTGAGTGCGGTGTGTGCGCGCGCGCACGCGTGTGTGAGACTCTTGAGCTGAACTGGGCTGTGTCTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | GAGCACCCTTCTCTTAAGTCTCCACTTCAAAAGGGCCACCCTGTGTaGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCTGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: EHPSLKSPLQKGHPV*KGWTGQLGLRAPEK Trigger: CTTCTCAGGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTTTGAAGTGGAGACTTAAGAGAAGGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | TCCGGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTaGGGACCCTATGTGAAGAAGAGTTTAGGGGTAGACACAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SGHMQVLSLGHLPTA*GPYVKKSLGVDTAQ Trigger: CTGGGCTGTGTCTACCCCTAAACTCTTCTTCACATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATaGAACAGATGTGCCTCATTCAGCAACACAGATTCATGCAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: LLRRGEVGQGGAMGP*NRCASFSNTDSCKN Trigger: ATTTTTGCATGAATCTGTGTTGCTGAATGAGGCACATCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR TCA 90 bp | TACACTTCACTTCTATCTGTTGTGTTGGTGATCAGAGAGGGCAAATaGATAGAGCCAGCCTTCCCAGGAATGGGGAGTGGGTATGTGACA | + |
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Preference number: 1 (lower is better) Translates to: YTSLLSVVLVIREGK*IEPAFPGMGSGYVT Trigger: TGTCACATACCCACTCCCCATTCCTGGGAAGGCTGGCTCTATTCATTTGCCCTCTCTGATCACCAACACAACAGATAGAAGTGAAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | CAGCATCCGAGGCATTTCTGTAAGAAACATTATTTAAGGAGCAGATaGAAGACCATCTCCTCCGGTCACATGCAGGTCCTTAGCTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QHPRHFCKKHYLRSR*KTISSGHMQVLSLG Trigger: TCCCAAGCTAAGGACCTGCATGTGACCGGAGGAGATGGTCTTCCATCTGCTCCTTAAATAATGTTTCTTACAGAAATGCCTCGGATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 90 bp | CCTACAAATTCTCTTTATTCCAGTGCACTGCGCTGGCTAACCAAATaGCTTAGGTTTGATCTTGCTAGGAATACGGAGTGTGTGTTATGT | + |
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Preference number: 1 (lower is better) Translates to: PTNSLYSSALRWLTK*LRFDLARNTECVLC Trigger: ACATAACACACACTCCGTATTCCTAGCAAGATCAAACCTAAGGCATTTGGTTAGCCAGCGCAGTGCACTGGAATAAAGAGAATTTGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | AAGCTGTATATGCCTACAAATTCTCTTTATTCCAGTGCACTGCGCTaGCTAACCAAATGCCTTAGGTTTGATCTTGCTAGGAATACGGAG | + |
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Preference number: 1 (lower is better) Translates to: KLYMPTNSLYSSALR*LTKCLRFDLARNTE Trigger: CTCCGTATTCCTAGCAAGATCAAACCTAAGGCATTTGGTTAGCCAGCGCAGTGCACTGGAATAAAGAGAATTTGTAGGCATATACAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 90 bp | CAAACACAATATATTTACTGTATTGGCATTTGCTCACAAGGCAAATaGGGCAACATTACACCGCTTCAATATTTGCTTTTAAAAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: QTQYIYCIGICSQGK*GNITPLQYLLLKML Trigger: CAGCATTTTTAAAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAATATATTGTGTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTCAGGGCGCGGCCCCTaGGCCTCAGTGACTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ARTHSRASPHASARACGGSGRGP*ASVTGF Trigger: AAAGCCAGTCACTGAGGCGCAGGGGCCGCGCCCTGA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGGCAAGCTCTGCGCTTTaGTGCGCTCCTTACCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: ARTHSRASPHASARACGGASSAL*CAPYPL Trigger: GAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGC...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCGAGCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTCGTAGGTCCTTGGCGTaGCTCAGCGGCCCCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: TGEHAHTRAHHRTQARVRRRSLA*LSGPWI Trigger: GATCCAGGGGCCGCTGAGCCACGCCAAGGACCTACG...ACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGCTCGCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGCTGCGCCTCAGTGACTaGCTTTCCCCTCTGCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ARTHSRASPHASARACGGLRLSD*LSPLLS Trigger: TGAAAGCAGAGGGGAAAGCCAGTCACTGAGGCGCAG...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCGAGCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGTGAAAGGGTGGAAATaGGGGGCGTCGAAGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TGEHAHTRAHHRTQARVRVKGWK*GASKGE Trigger: CTCCCCCTTCGACGCCCCCCATTTCCACCCTTTCAC...ACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGCTCGCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCGAGCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTACTGGCTTTCCCCTCTaGTTTCAGGCGACCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TGEHAHTRAHHRTQARVRTGFPL*FQATSQ Trigger: CTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCCAGT...ACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGCTCGCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCGCCCCTGCGCCTCAGTaGCTGGCTTTCCCCTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSAPAPQ*LAFPSA Trigger: AGCAGAGGGGAAAGCCAGTCACTGAGGCGCAGGGGC...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCAGTCTCACACACGCGTaGGCGCGCGCACACACCGCA | + |
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Preference number: 2 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSSLTHA*ARAHTA Trigger: TGCGGTGTGTGCGCGCGCGCACGCGTGTGTGAGACT...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCGGTAGGGCAGGGAGGTaGGATGGGGCCATGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSGRAGR*DGAMEQ Trigger: CTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACC...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGATGGCTCAGCGGCCCCTaGATCAAGGCGATCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRWLSGP*IKAILT Trigger: AGTTAGGATCGCCTTGATCCAGGGGCCGCTGAGCCA...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGACCCAGGAATGGGGAGTaGGTATGTGACAGAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRPRNGE*VCDRDK Trigger: TTTGTCTCTGTCACATACCCACTCCCCATTCCTGGG...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CAA 90 bp | AGCAGATGGAAGACCATCTCCTCCGGTCACATGCAGGTCCTTAGCTaGGGACATCTCCCAACGGCTTGGGGACCCTATGTGAAGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SRWKTISSGHMQVLS*GHLPTAWGPYVKKS Trigger: ACTCTTCTTCACATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACCGGAGGAGATGGTCTTCCATCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGATATCTGTTGTGTTGGTaGTCAGAGAGGGCAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRYLLCW*SERANE Trigger: TTCATTTGCCCTCTCTGATCACCAACACAACAGATA...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGACAAGAACATAGATTTTaGAAAGTGGGACGGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRQEHRF*KVGRSN Trigger: ATTGCTCCGTCCCACTTTTCAAAATCTATGTTCTTG...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTCTGGCGAAGGTTAGATaGGCCCCGCCTTCAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: WHLLTRQMGQHYTASIFALAKVR*APPSVP Trigger: GGGGACTGAAGGCGGGGCCCATCTAACCTTCGCCAG...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCCTCTGGGCAGCTTACTaGCCACAGGAGAAGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: FTVLAFAHKANGATLHRFLWAAY*PQEKWC Trigger: GCACCACTTCTCCTGTGGCCAGTAAGCTGCCCAGAG...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCTCTTGGGTGGTTGATTaGGGCCTGCCTTTCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: FTVLAFAHKANGATLHRFSWVVD*GLPFWV Trigger: TACCCAGAAAGGCAGGCCTCAATCAACCACCCAAGA...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTGGTGCGATGGGGCCATaGAACAGATGTGCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: AFAHKANGATLHRFNICFGAMGP*NRCASF Trigger: GAATGAGGCACATCTGTTCCATGGCCCCATCGCACC...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR CCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTAACACAGGGAGACACTaGAGGGGGAAAACAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: AFAHKANGATLHRFNICFNTGRH*RGKTVR Trigger: CCTCACTGTTTTCCCCCTCCAGTGTCTCCCTGTGTT...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCCGCTGGCTAACCAAATaGCTTAGGTTTGATCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: FTVLAFAHKANGATLHRFRWLTK*LRFDLA Trigger: AGCAAGATCAAACCTAAGGCATTTGGTTAGCCAGCG...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTCTCTTTATTCCAGTaGACTGCGCTGGCTAACCAA | + |
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Preference number: 2 (lower is better) Translates to: WHLLTRQMGQHYTASIFAFSLFQ*TALANQ Trigger: TTGGTTAGCCAGCGCAGTGCACTGGAATAAAGAGAA...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTACATTCAGTCAAGACTaGTGGAAGCTGTGTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WHLLTRQMGQHYTASIFATFSQD*WKLCQR Trigger: TCTCTGACACAGCTTCCAGCAGTCTTGACTGAATGT...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTCTTCCAGCTTTGAACTaGCCAAATTTTGTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: AFAHKANGATLHRFNICFLPALN*PNFVCV Trigger: AACACACACAAAATTTGGTCAGTTCAAAGCTGGAAG...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAGCAACACAGATTCATaGAAAAATCCCCATCTATTT | + |
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Preference number: 2 (lower is better) Translates to: FTVLAFAHKANGATLHRFSNTDS*KNPHLF Trigger: AAATAGATGGGGATTTTTGCATGAATCTGTGTTGCT...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR-3UTR GCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTAAGTCAGAGTTATCATaGAGTGACATGCATATTCCA | + |
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Preference number: 2 (lower is better) Translates to: AFAHKANGATLHRFNICFKSELS*SDMHIP Trigger: TGGAATATGCATGTCACTGCATGATAACTCTGACTT...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 72 bp | CACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTaGGGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTC | + |
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Preference number: 3 (lower is better) Translates to: HSRASPHASARA*GGQQALRFGAL Trigger: GAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 72 bp | CACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTaGGTGCGGCGGGCAGCAAGCTCTGCGCTTTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: HTLARITARKRA*VRRAASSALWC Trigger: GCACCAAAGCGCAGAGCTTGCTGCCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 72 bp | CGCGGCCCCTGCGCCTCAGTGACTGGCTTTCCCCTCTaGTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: RGPCASVTGFPL*FQATSQEALEG Trigger: CCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCCAGTCACTGAGGCGCAGGGGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR CCA 72 bp | GGCGAGATCAGGGCGCGGCCCCTGCGCCTCAGTGACTaGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GEIRARPLRLSD*LSPLLSGDQPG Trigger: TCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCCAGTCACTGAGGCGCAGGGGCCGCGCCCTGATCTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR TCA 72 bp | GTGGCTCAGCGGCCCCTGGATCAAGGCGATCCTAACTaGACAAAGCGGGCTAGACGCCACCTTTCCGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: VAQRPLDQGDPN*TKRARRHLSAP Trigger: GGGGGCGGAAAGGTGGCGTCTAGCCCGCTTTGTTCAGTTAGGATCGCCTTGATCCAGGGGCCGCTGAGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| 3UTR GCA 72 bp | CACAGCCCAGTTCAGCTCAAGAGTCTCACACACGCGTaGGCGCGCGCACACACCGCACTCACTCACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HSPVQLKSLTHA*ARAHTALTHTH Trigger: GTGTGTGTGAGTGAGTGCGGTGTGTGCGCGCGCGCACGCGTGTGTGAGACTCTTGAGCTGAACTGGGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | GTCCCCCGTAGGTCCTTGGCGTGGCTCAGCGGCCCCTaGATCAAGGCGATCCTAACTGAACAAAGCGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VPRRSLAWLSGP*IKAILTEQSGL Trigger: TAGCCCGCTTTGTTCAGTTAGGATCGCCTTGATCCAGGGGCCGCTGAGCCACGCCAAGGACCTACGGGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR GCA 72 bp | AAGGGGCCAAACCCGAGGCGGCGGCAGCAGCACCACTaGAGCTGCAGCATCCGAGGCATTTCTGTAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KGPNPRRRQQHH*SCSIRGISVRN Trigger: GTTTCTTACAGAAATGCCTCGGATGCTGCAGCTGCAGTGGTGCTGCTGCCGCCGCCTCGGGTTTGGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR TCA 72 bp | AAGGTGGCTCTTTCTCCCCCAAAGATCAACCTGTCCTaGGGCCTAAGAGGGAAGCGCTCGGAAAGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVALSPPKINLS*GLRGKRSEREG Trigger: CCCCTCCCTTTCCGAGCGCTTCCCTCTTAGGCCTCAGGACAGGTTGATCTTTGGGGGAGAAAGAGCCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | TCTCCACTTCAAAAGGGCCACCCTGTGTGGAAGGGCTaGACAGGACAACTGGGGTTGAGGGCTCCTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLQKGHPVWKG*TGQLGLRAPEK Trigger: CTTCTCAGGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTTTGAAGTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | AGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATaGAACAGATGTGCCTCATTCAGCAACACAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGEVGQGGAMGP*NRCASFSNTDS Trigger: TGAATCTGTGTTGCTGAATGAGGCACATCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | TCTCTTAAGTCTCCACTTCAAAAGGGCCACCCTGTGTaGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLKSPLQKGHPV*KGWTGQLGLRA Trigger: AGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTTTGAAGTGGAGACTTAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR GCA 72 bp | AGGGCAGGGAGGTGCGATGGGGCCATGGAACAGATGTaGCTCATTCAGCAACACAGATTCATGCAAAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RAGRCDGAMEQM*LIQQHRFMQKS Trigger: GGATTTTTGCATGAATCTGTGTTGCTGAATGAGGCACATCTGTTCCATGGCCCCATCGCACCTCCCTGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | ATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTaGGGACCCTATGTGAAGAAGAGTTTAGGGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MQVLSLGHLPTA*GPYVKKSLGVD Trigger: GTCTACCCCTAAACTCTTCTTCACATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR TCA 72 bp | CTTCTATCTGTTGTGTTGGTGATCAGAGAGGGCAAATaGATAGAGCCAGCCTTCCCAGGAATGGGGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLSVVLVIREGK*IEPAFPGMGSG Trigger: CCCACTCCCCATTCCTGGGAAGGCTGGCTCTATTCATTTGCCCTCTCTGATCACCAACACAACAGATAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR TCA 72 bp | GGGTATGTGACAGAGACAAACTCTTGGGTGGTTGATTaGGGCCTGCCTTTCTGGGTAAAGATCTTGAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GYVTETNSWVVD*GLPFWVKILRD Trigger: GTCTCTCAAGATCTTTACCCAGAAAGGCAGGCCTCAATCAACCACCCAAGAGTTTGTCTCTGTCACATACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR TCA 72 bp | GAGTGGGTATGTGACAGAGACAAACTCTTGGGTGGTTaGTTGAGGCCTGCCTTTCTGGGTAAAGATCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EWVCDRDKLLGG*LRPAFLGKDLE Trigger: CTCAAGATCTTTACCCAGAAAGGCAGGCCTCAATCAACCACCCAAGAGTTTGTCTCTGTCACATACCCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR GCA 72 bp | TCTCTTTATTCCAGTGCACTGCGCTGGCTAACCAAATaGCTTAGGTTTGATCTTGCTAGGAATACGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLYSSALRWLTK*LRFDLARNTEC Trigger: ACACTCCGTATTCCTAGCAAGATCAAACCTAAGGCATTTGGTTAGCCAGCGCAGTGCACTGGAATAAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | ATGCCTACAAATTCTCTTTATTCCAGTGCACTGCGCTaGCTAACCAAATGCCTTAGGTTTGATCTTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPTNSLYSSALR*LTKCLRFDLAR Trigger: CCTAGCAAGATCAAACCTAAGGCATTTGGTTAGCCAGCGCAGTGCACTGGAATAAAGAGAATTTGTAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTCTTCTATCTGTTGTGTaGGTGATCAGAGAGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFAHKANGATLHRFNICFLLSVV*VIREGK Trigger: TTTGCCCTCTCTGATCACCAACACAACAGATAGAAG...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CCA 72 bp | TATATTTACTGTATTGGCATTTGCTCACAAGGCAAATaGGGCAACATTACACCGCTTCAATATTTGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YIYCIGICSQGK*GNITPLQYLLL Trigger: TAAAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGCRRRG*ARWGSP Trigger: AGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTTTCCCTGGGGGTCGTaGAAAGACACGGGCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGFPWGS*KDTGSE Trigger: CTCGGAGCCCGTGTCTTTCCACGACCCCCAGGGAAA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGGCAGCGCCGGATACATaGCCTCCACGTCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQQALRFGALLTPSPSRAAPDT*PPRLPE Trigger: CTCAGGGAGACGTGGAGGCCATGTATCCGGCGCTGC...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGATGGGGTCCATGCCCTaGAAGGGCTTATGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGMGSMP*KGLCSG Trigger: TCCGGAACATAAGCCCTTCCAGGGCATGGACCCCAT...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTCTTCTCCTTTTGCTTaGGGTGGATCTTGGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGSSPFA*GGSWRG Trigger: GCCACGCCAAGATCCACCTCAAGCAAAAGGAGAAGA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGCTTGATGGTCTCCAGTaGGGTAATAGGGGGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGLDGLQ*GNRGWV Trigger: AACCCACCCCCTATTACCCCACTGGAGACCATCAAG...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGCTTGTTGCCGGGGGCTaGCTGGAAAGAGCTCGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GGQQALRFGALLTPSPSRLVAGG*LERARI Trigger: TATTCGAGCTCTTTCCAGCCAGCCCCCGGCAACAAG...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGAGCGTGGGGCCGCTCGTaGAGCGGGGTCTTGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRAWGRS*SGVLLG Trigger: GCCTAGCAAGACCCCGCTCCACGAGCGGCCCCACGC...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGACCGGGTCAGCTCGTCTaGGCGGCTGAAACGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRPGQLV*AAETAV Trigger: GACCGCCGTTTCAGCCGCTCAGACGAGCTGACCCGG...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGAGGTGGGCGCCGAGGATaGAGAGGGCGCACCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRGGRRG*RGRTPF Trigger: AAAGGGGGTGCGCCCTCTGCATCCTCGGCGCCCACC...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGTTAGCAAACTGCTCATaGTCACCGGCAGCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQQALRFGALLTPSPSRLANCS*SPAASR Trigger: CCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAA...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGAGCCTCCACGTCTCCCTaGGGAGGCTGCACCATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRASTSP*GGCTML Trigger: TAGCATGGTGCAGCCTCCTCAGGGAGACGTGGAGGC...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGAATCCCGGGTGGATCTaGTTGTCTTTGAAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGQQALRFGALLTPSPSRNPGWI*LSLKAL Trigger: CAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATT...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGAGCTTGCGCTCGTCGCTaGGCGCAAACTTGCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRACARR*AQTCAH Trigger: GTGGGCGCAAGTTTGCGCGCAGCGACGAGCGCAAGC...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTGTAGTCAGGAATCATaGGGAAAAGATTGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARTHSRASPHASARACGGCSQES*GKDCCP Trigger: TGGACAGCAATCTTTTCCCCATGATTCCTGACTACA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGAAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRRSRSC*RGLAGK Trigger: CTTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCT...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATTCTTGGCGTGGCGCTTaGGCTCGTCGCTGCGCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYSWRGA*ARRCAQ Trigger: TTGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGA...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGATTGATTTAGCAAACTaGTCATGGTCACCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGQQALRFGALLTPSPSRIDLAN*SWSPAA Trigger: AGCTGCCGGTGACCATGAGCAGTTTGCTAAATCAAT...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATCGCTGCGCGCAAACTTaGGCCCACAGAACTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYRCAQT*AHRTHR Trigger: CCTGTGAGTTCTGTGGGCGCAAGTTTGCGCGCAGCG...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATAGCCCAGGGTTTCCCTaGGGGTCGTGGAAAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYSPGFP*GSWKDT Trigger: CGTGTCTTTCCACGACCCCCAGGGAAACCCTGGGCT...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCTGGAGCCCATGTCGTTaGGATGGTGGTACAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSWSPCR*DGGTGC Trigger: ACAACCTGTACCACCATCCCAACGACATGGGCTCCA...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCCTGCCGAATCCCGGGTaGATCTGCTTGTCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSLPNPG*ICLSLK Trigger: CTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAG...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGATCCTTTTGCTTGAGGTaGATCTTGGCGTGGCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRSFCLR*ILAWRL Trigger: CAAGCGCCACGCCAAGATCCACCTCAAGCAAAAGGA...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| 3UTR CAA 72 bp | AAGACCATCTCCTCCGGTCACATGCAGGTCCTTAGCTaGGGACATCTCCCAACGGCTTGGGGACCCTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTISSGHMQVLS*GHLPTAWGPYV Trigger: CACATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACCGGAGGAGATGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTGGACGTCTGCGTACTaGGCGCCCCTGAGGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WHLLTRQMGQHYTASIFAWTSAY*APLRPG Trigger: CCCCGGCCTCAGGGGCGCTCAGTACGCAGACGTCCA...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCCCCTCTGCTTTCAGGCGACCAGCCAGGAGGCACTGGAAGGGAAAAGAAAGAGAGTTCCGGATTaGGCTTCTCGTTGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPLCFQATSQEALEGKRKRVPD*ASRWSD Trigger: GTCTGACCAACGAGAAGCCCAATCCGGAACTCTCTT...TCTTTTCCCTTCCAGTGCCTCCTGGCTGGTCGCCTGAAAGCAGAGGGGAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCGCGGTTGGGGCAGGCTaGCGAATCCCGGGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLAFAHKANGATLHRFAVGAG*RIPGGS Trigger: AGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGC...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATGACTTCTTCTCCTTTTaGTTGAGGTGGATCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYDFFSF*LRWILA Trigger: CGCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGTC...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCCTAGCCGTGGACGTCTaGGTACTGAGCGCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTVLAFAHKANGATLHRFLAVDV*VLSAPE Trigger: CTCAGGGGCGCTCAGTACGCAGACGTCCACGGCTAG...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR TCA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATAGATTGTCAGGCAATTaGTTTAGCAAACTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYRLSGN*FSKLLM Trigger: CATGAGCAGTTTGCTAAATCAATTGCCTGACAATCT...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCCCCGGATGGGGTCCATaGCCTGGAAGGGCTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLAFAHKANGATLHRFPGWGP*PGRAYV Trigger: AACATAAGCCCTTCCAGGGCATGGACCCCATCCGGG...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAGAGATCGCCGCAGTTaGAATAAGGAGGCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTVLAFAHKANGATLHRFRDRRS*NKEAAP Trigger: CGGCGCTGCCTCCTTATTCCAACTGCGGCGATCTCT...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTGTCCAAGGCCGGCTTaGCCGATTGGTAATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WHLLTRQMGQHYTASIFACPRPA*PIGNPG Trigger: CCCAGGATTACCAATCGGCCAAGCCGGCCTTGGACA...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTTGTCCTGGCACCAGTTaGAAGGAGAGTCGAAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AFAHKANGATLHRFNICFCPGTS*KESRKR Trigger: TCGCTTTCGACTCTCCTTCCAACTGGTGCCAGGACA...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CCA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTGCTTATGTTCCGGAATaGAGCCCATGTCGTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WHLLTRQMGQHYTASIFAAYVPE*SPCRWD Trigger: ATCCCAACGACATGGGCTCCATTCCGGAACATAAGC...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTGATTGGGCTTCTCGTTaGTCAGACCGATGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFAHKANGATLHRFNICFDWASR*SDRCPS Trigger: TGATGGACATCGGTCTGACCAACGAGAAGCCCAATC...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CCA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTCTAATGATGTTGTCCTaGCACCAGTTGGAAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFAHKANGATLHRFNICFLMMLS*HQLEGE Trigger: CTCTCCTTCCAACTGGTGCCAGGACAACATCATTAG...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTCGTGGAGCGGGGTCTaGCTAGGCCGATTGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ARTHSRASPHASARACGGSWSGV*LGRLGY Trigger: GTACCCCAATCGGCCTAGCAAGACCCCGCTCCACGA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTGCTTGAGGTGGATCTaGGCGTGGCGCTTGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARTHSRASPHASARACGGCLRWI*AWRLRS Trigger: CGAGCGCAAGCGCCACGCCAAGATCCACCTCAAGCA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGGAGAGTGAGCGGCGGTaGGGGCAGGCTGCCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GGQQALRFGALLTPSPSRESERR*GQAAES Trigger: GGATTCGGCAGCCTGCCCCAACCGCCGCTCACTCTC...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGGGCCGATTGGGGTACTaGCGGGGCCGGATGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGQQALRFGALLTPSPSRGRLGY*RGRMGL Trigger: CAAGCCCATCCGGCCCCGCAAGTACCCCAATCGGCC...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTGCGGCGGGTTGTCCTGGCACCAGTaGGAAGGAGAGTCGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARTHSRASPHASARACGGLSWHQ*EGESKA Trigger: CGCTTTCGACTCTCCTTCCAACTGGTGCCAGGACAA...CCCGCCGCACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGGTAATAGGGGGTGGGTaGACCCGGATGGGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGQQALRFGALLTPSPSRVIGGG*TRMGSM Trigger: CATGGACCCCATCCGGGTCAACCCACCCCCTATTAC...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGCCACCCTGTGTGGAAGGGCTGGACAGGACAACTGGGGTTGAGGGCTCCCGGGGCCGGATGGGCTaGAGAGTGAGCGGCGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGPPCVEGLDRTTGVEGSRGRMG*RVSGGW Trigger: CCAACCGCCGCTCACTCTCAAGCCCATCCGGCCCCG...GGAGCCCTCAACCCCAGTTGTCCTGTCCAGCCCTTCCACACAGGGTGGCCCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 90 bp | TTGGGGTACTTGCGGGGCCGGATGGGCTTGAGAGTGAGCGGCGGTTaGGGCAGGCTGCCGAATCCCGGGTGGATCTGCTTGTCTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGYLRGRMGLRVSGG*GRLPNPGWICLSLK Trigger: CTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCCGCTCACTCTCAAGCCCATCCGGCCCCGCAAGTACCCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 90 bp | GGGGGTCGTGGAAAGACACGGGCTCCGAGTAGAGATCGCCGCAGTTaGAATAAGGAGGCAGCGCCGGATACATGGCCTCCACGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRGKTRAPSRDRRS*NKEAAPDTWPPRLP Trigger: AGGGAGACGTGGAGGCCATGTATCCGGCGCTGCCTCCTTATTCCAACTGCGGCGATCTCTACTCGGAGCCCGTGTCTTTCCACGACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGCGGGCAGCAAGCTCTGCGCTTTGGTGCGCTCCTTACCCCCTCCCCCTCTCGGTTGTCTTTGAAGGCCTaGATGGTCTCCAGTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGQQALRFGALLTPSPSRLSLKA*MVSSGV Trigger: TACCCCACTGGAGACCATCAAGGCCTTCAAAGACAA...CCGAGAGGGGGAGGGGGTAAGGAGCGCACCAAAGCGCAGAGCTTGCTGCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | ACAGGCGAGCACGCACACACTCGCGCGCATCACCGCACGCAAGCGCGCGTGCGTTGGATCTGCTTGTCTTaGAAGGCCTTGATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGEHAHTRAHHRTQARVRWICLS*KALMVS Trigger: GGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCA...ACGCACGCGCGCTTGCGTGCGGTGATGCGCGCGAGTGTGTGCGTGCTCGCCTGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATATCTTGGCGTGGCGCTaGCGCTCGTCGCTGCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYILAWR*RSSLRA Trigger: TGCGCGCAGCGACGAGCGCAAGCGCCACGCCAAGAT...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 90 bp | GGCTTGAGAGTGAGCGGCGGTTGGGGCAGGCTGCCGAATCCCGGGTaGATCTGCTTGTCTTTGAAGGCCTTGATGGTCTCCAGTGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLRVSGGWGRLPNPG*ICLSLKALMVSSGV Trigger: TACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCCGCTCACTCTCAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGATCGCTGCGCGCAAACTaGCGCCCACAGAACTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRSLRAN*RPQNSQ Trigger: CTGTGAGTTCTGTGGGCGCAAGTTTGCGCGCAGCGA...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS GCA 90 bp | AGAGTGAGCGGCGGTTGGGGCAGGCTGCCGAATCCCGGGTGGATCTaGTTGTCTTTGAAGGCCTTGATGGTCTCCAGTGGGGTAATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSGGWGRLPNPGWI*LSLKALMVSSGVIG Trigger: CCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCCGCTCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 90 bp | TCCCGGGTGGATCTGCTTGTCTTTGAAGGCCTTGATGGTCTCCAGTaGGGTAATAGGGGGTGGGTTGACCCGGATGGGGTCCATGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRVDLLVFEGLDGLQ*GNRGWVDPDGVHAL Trigger: CAGGGCATGGACCCCATCCGGGTCAACCCACCCCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS TCA 90 bp | TCTGATTGTAATGGGCTACCGAGTCGCTGCTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCTCGGGGTACAGATTGTCAGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SDCNGLPSRCCRRRG*ARWGSPRGTDCQAI Trigger: AATTGCCTGACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAGCAGCGACTCGGTAGCCCATTACAATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGAGAAGAGGTGAGGTAGGGCAGGGAGGTGCGATGGGGCCATGGAACAGACGACTTCTTCTCCTTTaGCTTGAGGTGGATCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLRRGEVGQGGAMGPWNRRLLLL*LEVDLG Trigger: GCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGTCG...TCTGTTCCATGGCCCCATCGCACCTCCCTGCCCTACCTCACCTCTTCTCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 90 bp | TGCCGGGGGCTGGCTGGAAAGAGCTCGAATAAGAGAGTTCCGGATTaGGCTTCTCGTTGGTCAGACCGATGTCCATCACATTCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRGLAGKSSNKRVPD*ASRWSDRCPSHSLS Trigger: GGAGAGAGAATGTGATGGACATCGGTCTGACCAACGAGAAGCCCAATCCGGAACTCTCTTATTCGAGCTCTTTCCAGCCAGCCCCCGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035908.3 |
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| CDS CCA 90 bp | GCTGGAAAGAGCTCGAATAAGAGAGTTCCGGATTGGGCTTCTCGTTaGTCAGACCGATGTCCATCACATTCTCTCTCCCACCGTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGKSSNKRVPDWASR*SDRCPSHSLSHRGD Trigger: GTCCCCACGGTGGGAGAGAGAATGTGATGGACATCGGTCTGACCAACGAGAAGCCCAATCCGGAACTCTCTTATTCGAGCTCTTTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035908.3 |
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| CDS CCA 90 bp | GAAAGCGAACTTTCCCAAGTAGGTCACGGTCTTGTTGCCGGGGGCTaGCTGGAAAGAGCTCGAATAAGAGAGTTCCGGATTGGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESELSQVGHGLVAGG*LERARIREFRIGLL Trigger: GAGAAGCCCAATCCGGAACTCTCTTATTCGAGCTCTTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCGCTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS GCA 90 bp | AAGGAGAGTCGAAAGCGAACTTTCCCAAGTAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAAGAGCTCGAATAAGAGAGTTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KESRKRTFPSRSRSC*RGLAGKSSNKRVPD Trigger: ATCCGGAACTCTCTTATTCGAGCTCTTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCGCTTTCGACTCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GGTCACATGCAGGTCCTTAGCTTGGGACATCTCCCAACGGCTTGGGGACCCTATATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHMQVLSLGHLPTAWGPYMRLMM*SWHQLE Trigger: TTCCAACTGGTGCCAGGACAACATCATTAGCCTCAT...ATAGGGTCCCCAAGCCGTTGGGAGATGTCCCAAGCTAAGGACCTGCATGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCCTGCCGGAGAAGAGGTaGAGCGCGCTGGGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTVLAFAHKANGATLHRFLPEKR*SALGIS Trigger: GGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAG...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 90 bp | AGCCCATGTCGTTGGGATGGTGGTACAGGTTGTAGTCAGGAATCATaGGGAAAAGATTGCTGTCCAAGGCCGGCTTGGCCGATTGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPCRWDGGTGCSQES*GKDCCPRPAWPIGN Trigger: ATTACCAATCGGCCAAGCCGGCCTTGGACAGCAATCTTTTCCCCATGATTCCTGACTACAACCTGTACCACCATCCCAACGACATGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 90 bp | CCATGCCCTGGAAGGGCTTATGTTCCGGAATGGAGCCCATGTCGTTaGGATGGTGGTACAGGTTGTAGTCAGGAATCATGGGGAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PCPGRAYVPEWSPCR*DGGTGCSQESWGKD Trigger: ATCTTTTCCCCATGATTCCTGACTACAACCTGTACCACCATCCCAACGACATGGGCTCCATTCCGGAACATAAGCCCTTCCAGGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | TTTACTGTATTGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCGGATTGGGCTTCTCGTaGGTCAGACCGATGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FTVLAFAHKANGATLHRFGLGFS*VRPMSI Trigger: GATGGACATCGGTCTGACCAACGAGAAGCCCAATCC...GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | TGGCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTATGGAGCCCATGTCGTaGGGATGGTGGTACAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WHLLTRQMGQHYTASIFAMEPMS*GWWYRL Trigger: CAACCTGTACCACCATCCCAACGACATGGGCTCCAT...AGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS-3UTR CAA 90 bp | GCATTTGCTCACAAGGCAAATGGGGCAACATTACACCGCTTCAATATTTGCTTTCCCGGGTGGATCTGCTaGTCTTTGAAGGCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AFAHKANGATLHRFNICFPGWIC*SLKALM Trigger: CATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGG...AAAGCAAATATTGAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CAA 72 bp | CTTGCGGGGCCGGATGGGCTTGAGAGTGAGCGGCGGTaGGGGCAGGCTGCCGAATCCCGGGTGGATCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAGPDGLESERR*GQAAESRVDLL Trigger: AAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCCGCTCACTCTCAAGCCCATCCGGCCCCGCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS TCA 72 bp | GGAGGCAGCGCCGGATACATGGCCTCCACGTCTCCCTaGGGAGGCTGCACCATGCTAGCCGTGGACGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSAGYMASTSP*GGCTMLAVDVC Trigger: GCAGACGTCCACGGCTAGCATGGTGCAGCCTCCTCAGGGAGACGTGGAGGCCATGTATCCGGCGCTGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | CGCCGCAGTTGGAATAAGGAGGCAGCGCCGGATACATaGCCTCCACGTCTCCCTGAGGAGGCTGCACCATGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSWNKEAAPDT*PPRLPEEAAPC Trigger: GCATGGTGCAGCCTCCTCAGGGAGACGTGGAGGCCATGTATCCGGCGCTGCCTCCTTATTCCAACTGCGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS GCA 72 bp | GGCGGTTGGGGCAGGCTGCCGAATCCCGGGTGGATCTaGTTGTCTTTGAAGGCCTTGATGGTCTCCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGWGRLPNPGWI*LSLKALMVSSG Trigger: CCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | GTGAGCGGCGGTTGGGGCAGGCTGCCGAATCCCGGGTaGATCTGCTTGTCTTTGAAGGCCTTGATGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSGGWGRLPNPG*ICLSLKALMVS Trigger: GGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACCGCCGCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
||
| CDS TCA 72 bp | AATGGGCTACCGAGTCGCTGCTGCCGGAGAAGAGGTTaGGCGCGCTGGGGATCTCCTCGGGGTACAGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: NGLPSRCCRRRG*ARWGSPRGTDC Trigger: ACAATCTGTACCCCGAGGAGATCCCCAGCGCGCTCAACCTCTTCTCCGGCAGCAGCGACTCGGTAGCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
||
| CDS CCA 72 bp | ATAGGGGGTGGGTTGACCCGGATGGGGTCCATGCCCTaGAAGGGCTTATGTTCCGGAATGGAGCCCATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: IGGGLTRMGSMP*KGLCSGMEPMS Trigger: CGACATGGGCTCCATTCCGGAACATAAGCCCTTCCAGGGCATGGACCCCATCCGGGTCAACCCACCCCCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
||
| CDS CCA 72 bp | CCCCCTTTCTCCGACTTCTTCTCCTTTTGCTTGAGGTaGATCTTGGCGTGGCGCTTGCGCTCGTCGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPFSDFFSFCLR*ILAWRLRSSLR Trigger: GCGCAGCGACGAGCGCAAGCGCCACGCCAAGATCCACCTCAAGCAAAAGGAGAAGAAGTCGGAGAAAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CAA 90 bp | GGCAGGCTGCCGAATCCCGGGTGGATCTGCTTGTCTTTGAAGGCCTaGATGGTCTCCAGTGGGGTAATAGGGGGTGGGTTGACCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GRLPNPGWICLSLKA*MVSSGVIGGGLTRM Trigger: CATCCGGGTCAACCCACCCCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
||
| CDS CCA 72 bp | GGAAAGACACGGGCTCCGAGTAGAGATCGCCGCAGTTaGAATAAGGAGGCAGCGCCGGATACATGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKTRAPSRDRRS*NKEAAPDTWPP Trigger: TGGAGGCCATGTATCCGGCGCTGCCTCCTTATTCCAACTGCGGCGATCTCTACTCGGAGCCCGTGTCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
||
| CDS CAA 72 bp | GGTTGGGGCAGGCTGCCGAATCCCGGGTGGATCTGCTaGTCTTTGAAGGCCTTGATGGTCTCCAGTGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GWGRLPNPGWIC*SLKALMVSSGV Trigger: TACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCCCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
||
| CDS CAA 90 bp | GCCGGGGGCACCCCCAAGATGCCGGCACTCATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAAGGAGAGTCGAAAGCGAACTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: AGGTPKMPALMRLMM*SWHQLEGESKANFP Trigger: GGGAAAGTTCGCTTTCGACTCTCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTCATGAGTGCCGGCATCTTGGGGGTGCCCCCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CAA 72 bp | GGCAGGCTGCCGAATCCCGGGTGGATCTGCTTGTCTTaGAAGGCCTTGATGGTCTCCAGTGGGGTAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRLPNPGWICLS*KALMVSSGVIG Trigger: CCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGGCAGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | TGGGGTCCATGCCCTGGAAGGGCTTATGTTCCGGAATaGAGCCCATGTCGTTGGGATGGTGGTACAGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: WGPCPGRAYVPE*SPCRWDGGTGC Trigger: ACAACCTGTACCACCATCCCAACGACATGGGCTCCATTCCGGAACATAAGCCCTTCCAGGGCATGGACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | GATCTGCTTGTCTTTGAAGGCCTTGATGGTCTCCAGTaGGGTAATAGGGGGTGGGTTGACCCGGATGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: DLLVFEGLDGLQ*GNRGWVDPDGV Trigger: GACCCCATCCGGGTCAACCCACCCCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CAA 72 bp | CCGAATCCCGGGTGGATCTGCTTGTCTTTGAAGGCCTaGATGGTCTCCAGTGGGGTAATAGGGGGTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PNPGWICLSLKA*MVSSGVIGGGL Trigger: CAACCCACCCCCTATTACCCCACTGGAGACCATCAAGGCCTTCAAAGACAAGCAGATCCACCCGGGATTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | CGTTGGGATGGTGGTACAGGTTGTAGTCAGGAATCATaGGGAAAAGATTGCTGTCCAAGGCCGGCTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RWDGGTGCSQES*GKDCCPRPAWP Trigger: CGGCCAAGCCGGCCTTGGACAGCAATCTTTTCCCCATGATTCCTGACTACAACCTGTACCACCATCCCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CAA 72 bp | ACCCCCAAGATGCCGGCACTCATGAGGCTAATGATGTaGTCCTGGCACCAGTTGGAAGGAGAGTCGAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: TPKMPALMRLMM*SWHQLEGESKA Trigger: CGCTTTCGACTCTCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTCATGAGTGCCGGCATCTTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS GCA 72 bp | CGAAAGCGAACTTTCCCAAGTAGGTCACGGTCTTGTTaGCGGGGGCTGGCTGGAAAGAGCTCGAATAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RKRTFPSRSRSC*RGLAGKSSNKR Trigger: TCTCTTATTCGAGCTCTTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCGCTTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | CTTTCCCAAGTAGGTCACGGTCTTGTTGCCGGGGGCTaGCTGGAAAGAGCTCGAATAAGAGAGTTCCGGATT | + |
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Preference number: 6 (lower is better) Translates to: LSQVGHGLVAGG*LERARIREFRI Trigger: AATCCGGAACTCTCTTATTCGAGCTCTTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS GCA 72 bp | CGGGGTACAGATTGTCAGGCAATTGATTTAGCAAACTaGTCATGGTCACCGGCAGCTTCTCGGCGAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RGTDCQAIDLAN*SWSPAASRRVC Trigger: GCAAACTCGCCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAAATCAATTGCCTGACAATCTGTACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 72 bp | GGAAGGGCTTATGTTCCGGAATGGAGCCCATGTCGTTaGGATGGTGGTACAGGTTGTAGTCAGGAATCATGG | + |
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Preference number: 6 (lower is better) Translates to: GRAYVPEWSPCR*DGGTGCSQESW Trigger: CCATGATTCCTGACTACAACCTGTACCACCATCCCAACGACATGGGCTCCATTCCGGAACATAAGCCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | AGCTCGAATAAGAGAGTTCCGGATTGGGCTTCTCGTTaGTCAGACCGATGTCCATCACATTCTCTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSNKRVPDWASR*SDRCPSHSLSH Trigger: GTGGGAGAGAGAATGTGATGGACATCGGTCTGACCAACGAGAAGCCCAATCCGGAACTCTCTTATTCGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035908.3 |
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| CDS CCA 72 bp | CTGGCTGGAAAGAGCTCGAATAAGAGAGTTCCGGATTaGGCTTCTCGTTGGTCAGACCGATGTCCATCACAT | + |
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Preference number: 6 (lower is better) Translates to: LAGKSSNKRVPD*ASRWSDRCPSH Trigger: ATGTGATGGACATCGGTCTGACCAACGAGAAGCCCAATCCGGAACTCTCTTATTCGAGCTCTTTCCAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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| CDS CCA 72 bp | ACAGATTGTCAGGCAATTGATTTAGCAAACTGCTCATaGTCACCGGCAGCTTCTCGGCGAGTTTGCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TDCQAIDLANCS*SPAASRRVCRS Trigger: TGACCGGCAAACTCGCCGAGAAGCTGCCGGTGACCATGAGCAGTTTGCTAAATCAATTGCCTGACAATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225200.2 |
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| CDS CCA 72 bp | AAGATGCCGGCACTCATGAGGCTAATGATGTTGTCCTaGCACCAGTTGGAAGGAGAGTCGAAAGCGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: KMPALMRLMMLS*HQLEGESKANF Trigger: AAAGTTCGCTTTCGACTCTCCTTCCAACTGGTGCCAGGACAACATCATTAGCCTCATGAGTGCCGGCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035908.3 ENSMUST00000225200.2 |
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