Pregenerated sensors for EGR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037868Ensembl transcript IDs: ENSMUST00000048289.14, ENSMUST00000105438.9, ENSMUST00000127820.2, ENSMUST00000130933.2, ENSMUST00000145754.8, ENSMUST00000145936.2, ENSMUST00000146986.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTAAGTTTTCGGAAGGCCGTCCGTGAGAAGGTGGGACAGAGCTaGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLSFRKAVREKVGQS*APSRSFAQITGSWG Trigger: TCCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCTTCTCACGGACGGCCTTCCGAAAACTTAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR GCA 90 bp | TTGAGATGGCCAGAGAAACCTCCATTCACTGCTCTAGGGCCAGAGTaGAGCAGCCAGGATGAGGCTCTGCTCACTGTACAACTCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: LRWPEKPPFTALGPE*SSQDEALLTVQLPT Trigger: GGTGGGGAGTTGTACAGTGAGCAGAGCCTCATCCTGGCTGCTGCACTCTGGCCCTAGAGCAGTGAATGGAGGTTTCTCTGGCCATCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 90 bp | AGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTaGGTTTCTAGGACATATTGCTTAAGGGTTGAGATGGCCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SQYCFVLPDIALPFS*VSRTYCLRVEMARE Trigger: TTCTCTGGCCATCTCAACCCTTAAGCAATATGTCCTAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 90 bp | AATATTAATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTaGTTTTTCTGTTCCCATAGTAAGGCATCCTGTACACATGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: NINRQKYTAILKPKE*FFCSHSKASCTHAD Trigger: GTCTGCATGTGTACAGGATGCCTTACTATGGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTATTAATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGGGGGCCTGGAGAAACTaGTGTGTCAGCCAGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GTELGSIKVLCPDHGIMGGAWRN*CVSQSF Trigger: GAAGCTCTGGCTGACACACCAGTTTCTCCAGGCCCC...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTCGGAAGGCCGTCCGTaGGAAGGTGGGACAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EPILLCPARHCTSILLSFSEGRP*EGGTEL Trigger: CAGCTCTGTCCCACCTTCTCACGGACGGCCTTCCGA...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGGAAACCTCCATTCACTaGTCTAGGGCCAGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TAHITQGTEDTCNTTHCMETSIH*SRARVQ Trigger: CTGCACTCTGGCCCTAGAGCAGTGAATGGAGGTTTC...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTGGGGCCTGGAGAAACTaGTGTGTCAGCCAGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TRHRGHLQHHSLHASYVRGAWRN*CVSQSF Trigger: GAAGCTCTGGCTGACACACCAGTTTCTCCAGGCCCC...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTCAGATCACGGGATCATaGGGAGGAACAGGGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TTGIQGQRKGLADHSQTSQITGS*GGTGKG Trigger: ACCCTTCCCTGTTCCTCCCCATGATCCCGTGATCTG...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTAGGGCCTCTGGGGCCTaGAGAAACTGGTGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GANIALSCPTLHFHSLEFRASGA*RNWCVS Trigger: GCTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCT...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGCCGTCCGTGAGAAGGTaGGACAGAGCTGGGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: HLQHHSLHASYVRPPLNKPSVRR*DRAGLH Trigger: ATGGAGCCCAGCTCTGTCCCACCTTCTCACGGACGG...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTGTGCAGCAGCCAGGATaGGGCTCTGCTCACTGTACA | + |
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Preference number: 2 (lower is better) Translates to: GANIALSCPTLHFHSLEFVQQPG*GSAHCT Trigger: TGTACAGTGAGCAGAGCCTCATCCTGGCTGCTGCAC...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTAAGGTGGGACAGAGCTaGGCTCCATCAAGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TRHRGHLQHHSLHASYVRKVGQS*APSRSF Trigger: AAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCTT...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCATTTCTTGGAGTaGCAGTCAACTCCCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: TRHRGHLQHHSLHASYVRPHFLE*QSTPFK Trigger: TTTGAAGGGAGTTGACTGTCACTCCAAGAAATGGGG...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGGAAACCTCCATTCACTaGTCTAGGGCCAGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HLQHHSLHASYVRPPLNKETSIH*SRARVQ Trigger: CTGCACTCTGGCCCTAGAGCAGTGAATGGAGGTTTC...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTTCAACTCCCTTCAAATaGCCTAAGTTTTCGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TTGIQGQRKGLADHSQTSSTPFK*PKFSEG Trigger: GCCTTCCGAAAACTTAGGCCATTTGAAGGGAGTTGA...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCAGGGCCTCTGGGGCCTaGAGAAACTGGTGTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPRASGA*RNWCVS Trigger: GCTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCT...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTAAAGGTGGGACAGAGCTaGGCTCCATCAAGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ANIALSCPTLHFHSLEFLKVGQS*APSRSF Trigger: AAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCTT...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCCCGTCCGTGAGAAGGTaGGACAGAGCTGGGCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPPSVRR*DRAGLH Trigger: ATGGAGCCCAGCTCTGTCCCACCTTCTCACGGACGG...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGAAAAGGAGCCAATATTaGTTTGTCCTGCCCGACATT | + |
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Preference number: 2 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKKRSQY*FVLPDI Trigger: AATGTCGGGCAGGACAAAGCAATATTGGCTCCTTTT...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTACCCCATTTCTTGGAGTaGCAGTCAACTCCCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: ANIALSCPTLHFHSLEFLPHFLE*QSTPFK Trigger: TTTGAAGGGAGTTGACTGTCACTCCAAGAAATGGGG...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGGTTTCTAGGACATATTaGTTAAGGGTTGAGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: HLQHHSLHASYVRPPLNKVSRTY*LRVEMA Trigger: GGCCATCTCAACCCTTAAGCAATATGTCCTAGAAAC...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCGGCACAGAGGACACTTaGAACACCACTCACTGCATG | + |
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Preference number: 2 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPGTEDT*NTTHCM Trigger: CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCC...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACGCACTTCCATTCTCTTaGGTTTCTAGGACATATTGC | + |
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Preference number: 2 (lower is better) Translates to: KQISGSDIEAHSHLKFGYALPFS*VSRTYC Trigger: GCAATATGTCCTAGAAACTCAAGAGAATGGAAGTGC...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 72 bp | ATTCACTGCTCTAGGGCCAGAGTGCAGCAGCCAGGATaGGGCTCTGCTCACTGTACAACTCCCCACCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: IHCSRARVQQPG*GSAHCTTPHPH Trigger: GTGGGGGTGGGGAGTTGTACAGTGAGCAGAGCCTCATCCTGGCTGCTGCACTCTGGCCCTAGAGCAGTGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR CCA 72 bp | TTTCGGAAGGCCGTCCGTGAGAAGGTGGGACAGAGCTaGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGA | + |
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Preference number: 3 (lower is better) Translates to: FRKAVREKVGQS*APSRSFAQITG Trigger: TCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCTTCTCACGGACGGCCTTCCGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR GCA 72 bp | GAAGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTaGCCAGATCACGGGATCATGGGGAGGAACAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: EGGTELGSIKVL*PDHGIMGRNRE Trigger: TTCCCTGTTCCTCCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 72 bp | CCCTTCAAATGGCCTAAGTTTTCGGAAGGCCGTCCGTaGGAAGGTGGGACAGAGCTGGGCTCCATCAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: PFKWPKFSEGRP*EGGTELGSIKV Trigger: GACCTTGATGGAGCCCAGCTCTGTCCCACCTTCTCACGGACGGCCTTCCGAAAACTTAGGCCATTTGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CAA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTCACCCAGCCCTCTTTTaGCTCCCCCATTTCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: TTGIQGQRKGLADHSQTSHPALF*LPHFLE Trigger: CTCCAAGAAATGGGGGAGCAAAAAGAGGGCTGGGTG...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATCACCCAGCCCTCTTTTaGCTCCCCCATTTCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: KSLRTTGIQGQRKGLADHHPALF*LPHFLE Trigger: CTCCAAGAAATGGGGGAGCAAAAAGAGGGCTGGGTG...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR GCA 72 bp | AACACTGCCCACATCACACAAGGCACAGAGGACACTTaGAACACCACTCACTGCATGCATCCTATGTACGTC | + |
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Preference number: 3 (lower is better) Translates to: NTAHITQGTEDT*NTTHCMHPMYV Trigger: GACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTACACCCAGCCCTCTTTTaGCTCCCCCATTTCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ANIALSCPTLHFHSLEFLHPALF*LPHFLE Trigger: CTCCAAGAAATGGGGGAGCAAAAAGAGGGCTGGGTG...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGAAAAAGGAGCCAATATaGCTTTGTCCTGCCCGACAT | + |
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Preference number: 3 (lower is better) Translates to: HLQHHSLHASYVRPPLNKKKEPI*LCPARH Trigger: ATGTCGGGCAGGACAAAGCAATATTGGCTCCTTTTT...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 72 bp | TGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTaGGTTTCTAGGACATATTGCTTAAGGGTTGAGATG | + |
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Preference number: 3 (lower is better) Translates to: CFVLPDIALPFS*VSRTYCLRVEM Trigger: CATCTCAACCCTTAAGCAATATGTCCTAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 72 bp | AGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTaGTTTTTCTGTTCCCATAGTAAGGCATCCTGTACA | + |
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Preference number: 3 (lower is better) Translates to: RQKYTAILKPKE*FFCSHSKASCT Trigger: TGTACAGGATGCCTTACTATGGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR TCA 72 bp | AAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTaGAATTTGGCTACAAAGGTAACACTTTTAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: KSAAVTLKHILT*NLATKVTLLSH Trigger: GTGACTTAAAAGTGTTACCTTTGTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR GCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGAGGCTGCCCCCGGCCTaGGAGCCCCCAGGACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQRLPPA*EPPGPE Trigger: CTCTGGTCCTGGGGGCTCGCAGGCCGGGGGCAGCCT...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCACACCCAGGGGTCCCGTaGCCAGTGGGTTGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSHPGVP*PVGWGR Trigger: CCTCCCCCAACCCACTGGCCACGGGACCCCTGGGTG...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| 3UTR CAA 72 bp | CGGGATCATGGGGAGGAACAGGGAAGGGTGGTAGTGTaGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RDHGEEQGRVVV*AARTEGLWGLE Trigger: CTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACTACCACCCTTCCCTGTTCCTCCCCATGATCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR TCA 90 bp | GGTGGTAGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTCCCAGGACCAGAGGCTaGAGACTGGGCAGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GGSVGSSDRGPLGPGETGPRTRG*RLGRWR Trigger: CCTCCATCTGCCCAGTCTTCAGCCTCTGGTCCTGGG...ACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACTACCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGTCCCGTGGCCAGTaGGTTGGGGGAGGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHGSRGQ*VGGGGG Trigger: ACCTCCGCCTCCCCCAACCCACTGGCCACGGGACCC...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGCCCAGGACCAGAGGCTaGAGACTGGGCAGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GTELGSIKVLCPDHGIMGPRTRG*RLGRWR Trigger: CCTCCATCTGCCCAGTCTTCAGCCTCTGGTCCTGGG...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR GCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGAGGCTGCCCCCGGCCTaGGAGCCCCCAGGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMRLPPA*EPPGPE Trigger: CTCTGGTCCTGGGGGCTCGCAGGCCGGGGGCAGCCT...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAAGGCCAGAGAGGAGGTaGAAGTGGTGGATGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSRPERR*KWWMAA Trigger: CGCCGCCATCCACCACTTCCACCTCCTCTCTGGCCT...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCATCCTGGTTCGAGAGGTaGAGGAGGCCAGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSSWFER*RRPVVL Trigger: GAGGACCACTGGCCTCCTGCACCTCTCGAACCAGGA...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGGCTGAGTCTGGGACATaGTACACACACCCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQAESGT*YTHPGV Trigger: GACCCCTGGGTGTGTGTACCATGTCCCAGACTCAGC...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGCCAGCAGCACCGTGTaGATCTCTCTGGCACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSASSTV*ISLARR Trigger: TCTCCGTGCCAGAGAGATCCACACGGTGCTGCTGGC...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGACGGATGGTAGAGAGTaGCGTGAGTGGAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTELGSIKVLCPDHGIMGTDGRE*REWRGH Trigger: GTGCCCCCTCCACTCACGCCACTCTCTACCATCCGT...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGTTCGAGGTCGCAGGATaGGCCGCAATGGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTELGSIKVLCPDHGIMGFEVAG*AAMAGG Trigger: ACCACCTGCCATTGCGGCCCATCCTGCGACCTCGAA...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGTGGCAGTCACTGCTaGAGACCCACTGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHGGSHC*RPTARQ Trigger: CTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACC...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTAGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTCTTCTGGATAGCAGCTaGCACCAGGGTACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSVGSSDRGPLGPGETGLLDSS*HQGTVG Trigger: ACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAG...ACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACTACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGGGATTCGGATGTGCCTaGTCAGCTCATCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQGFGCA*SAHQSV Trigger: CACGCTCTGATGAGCTGACCAGGCACATCCGAATCC...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGGCCGAAGGTGGATCTTaGTGTGGCGCTTCCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQAEGGS*CGASFR Trigger: ACGAAAGGAAGCGCCACACCAAGATCCACCTTCGGC...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCACCAGAGGCTGAAGACTaGGCAGATGGAGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSPEAED*ADGGAE Trigger: CTCTGCACCTCCATCTGCCCAGTCTTCAGCCTCTGG...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGTGGTCCAGTTCAGGCTaGGTCTGGGACATGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTELGSIKVLCPDHGIMGWSSSG*VWDMVH Trigger: GTGTACCATGTCCCAGACTCAGCCTGAACTGGACCA...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTTTGCTCCTGGTCCCGTaGCTCCAGCACCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSLLLVP*LQHRDP Trigger: GGGGTCCCGGTGCTGGAGTCACGGGACCAGGAGCAA...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGGGTCTGGTTTCTAGGTaGAGAGATGGGAGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQGLVSR*RDGSEA Trigger: AGCTTCGCTCCCATCTCTGCACCTAGAAACCAGACC...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCTGCTGCAGACCCACTaGCAGGCAGCCGAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMLLQTH*QAAEVP Trigger: AGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAG...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGGGCACCAGGGTACTGTaGGTCAATGGAGAATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLAARTEGLWGLEKLVCQGTRVL*VNGEFA Trigger: GGCAAATTCTCCATTGACCCACAGTACCCTGGTGCC...CTGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATGGGTCCCGTGGCCAGTaGGTTGGGGGAGGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHGSRGQ*VGGGGG Trigger: ACCTCCGCCTCCCCCAACCCACTGGCCACGGGACCC...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATTTGCTCCTGGTCCCGTaGCTCCAGCACCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHLLLVP*LQHRDP Trigger: GGGGTCCCGGTGCTGGAGTCACGGGACCAGGAGCAA...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGAGGCTGCCCCCGGCCTaGGAGCCCCCAGGACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKRLPPA*EPPGPE Trigger: CTCTGGTCCTGGGGGCTCGCAGGCCGGGGGCAGCCT...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATACCTGGGTCCATAGCTaGCTTGGGGGATGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHTWVHS*LGGWVG Trigger: TCCTACCCATCCCCCAAGCCAGCTATGGACCCAGGT...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGAGAGAGTGGCGTGAGTaGAGGGGGCACTCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMREWRE*RGHSQG Trigger: TCCCTGCGAGTGCCCCCTCCACTCACGCCACTCTCT...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATCCAGAGGCTGAAGACTaGGCAGATGGAGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHPEAED*ADGGAE Trigger: CTCTGCACCTCCATCTGCCCAGTCTTCAGCCTCTGG...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAGTGTGGGTTCGGATGTaGGTAGTAAGGTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSVWVRM*VVRWSL Trigger: AAGTGACCACCTTACTACTCACATCCGAACCCACAC...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTTTGAAGCTGGAGGGGTaGCCCCTTGCAAGATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSLKLEG*PLARCP Trigger: CGGGCATCTTGCAAGGGGTCACCCCTCCAGCTTCAA...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTTGCTCCTGGTCCCGTaGCTCCAGCACCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFLLLVP*LQHRDP Trigger: GGGGTCCCGGTGCTGGAGTCACGGGACCAGGAGCAA...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTAGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTACCACTGAGAGTTACTaGGATTTTGTCTACGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGSVGSSDRGPLGPGETGTTESY*DFVYGL Trigger: AAGGCCGTAGACAAAATCCCAGTAACTCTCAGTGGT...ACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACTACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCAATTGATGATACCTTCTaGATAGCAGCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGSSDRGPLGPGETGVSIDDTF*IAAGTR Trigger: CCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAAT...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTACACCCAGGGGTCCCGTaGCCAGTGGGTTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLHPGVP*PVGWGR Trigger: CCTCCCCCAACCCACTGGCCACGGGACCCCTGGGTG...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGGCTGAGTCTGGGACATaGTACACACACCCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMAESGT*YTHPGV Trigger: GACCCCTGGGTGTGTGTACCATGTCCCAGACTCAGC...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGACCTGGGTCCATAGCTaGCTTGGGGGATGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMTWVHS*LGGWVG Trigger: TCCTACCCATCCCCCAAGCCAGCTATGGACCCAGGT...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATCATAGGAATGAGACCTaGGTCCATAGCTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHHRNET*VHSWLG Trigger: CCCAAGCCAGCTATGGACCCAGGTCTCATTCCTATG...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTAGAGAGTGGCGTGAGTaGAGGGGGCACTCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRHRGHLQHHSLHASYVRREWRE*RGHSQG Trigger: TCCCTGCGAGTGCCCCCTCCACTCACGCCACTCTCT...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCCAGAGGCTGAAGACTaGGCAGATGGAGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMPEAED*ADGGAE Trigger: CTCTGCACCTCCATCTGCCCAGTCTTCAGCCTCTGG...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATCAGTCATGTCAATGTTaGTCATGCCATCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHQSCQC*SCHLPP Trigger: TGGCGGGAGATGGCATGATCAACATTGACATGACTG...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTTTGAAGCTGGAGGGGTaGCCCCTTGCAAGATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRHRGHLQHHSLHASYVRLKLEG*PLARCP Trigger: CGGGCATCTTGCAAGGGGTCACCCCTCCAGCTTCAA...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGTGGTCCAGTTCAGGCTaGGTCTGGGACATGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMWSSSG*VWDMVH Trigger: GTGTACCATGTCCCAGACTCAGCCTGAACTGGACCA...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGCTGCTGCAGACCCACTaGCAGGCAGCCGAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKLLQTH*QAAEVP Trigger: AGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAG...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTGCTGCAGACCCACTaGCAGGCAGCCGAGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFLLQTH*QAAEVP Trigger: AGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAG...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATAGGCTGTCAGGCAGCTaGTGCATAAAACCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHRLSGS*CIKPLR Trigger: TCTCAGTGGTTTTATGCACCAGCTGCCTGACAGCCT...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGCACCATTGGGGAAGATaGTCACCGACGAGGCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKHHWGR*SPTRRR Trigger: TCGCCGCCTCGTCGGTGACCATCTTCCCCAATGGTG...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCACATCACACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCTTCTGGATAGCAGCTaGCACCAGGGTACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAHITQGTEDTCNTTHCMLLDSS*HQGTVG Trigger: ACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAG...CATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGTGTGATGTGGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACCACCCAGGGGTCCCGTaGCCAGTGGGTTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYHPGVP*PVGWGR Trigger: CCTCCCCCAACCCACTGGCCACGGGACCCCTGGGTG...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGGAGGAGGAGGTGGTaGCGGAGAGTAGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHRRRRW*RRVEVV Trigger: GACCACCTCTACTCTCCGCCACCACCTCCTCCTCCT...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGAGGAGGAGGAGGTGGTaGCGGAGAGTAGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKRRRRW*RRVEVV Trigger: GACCACCTCTACTCTCCGCCACCACCTCCTCCTCCT...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATGCCAGCAGCACCGTGTaGATCTCTCTGGCACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHASSTV*ISLARR Trigger: TCTCCGTGCCAGAGAGATCCACACGGTGCTGCTGGC...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTTTCGAGGTCGCAGGATaGGCCGCAATGGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRGHLQHHSLHASYVRFEVAG*AAMAGG Trigger: ACCACCTGCCATTGCGGCCCATCCTGCGACCTCGAA...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCACAGAGGACACTTGCAACACCACTCACTGCATGCATCCTATGTACGTGGTGCAGGAGGCCAGTaGTCCTCCAATGGCGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRHRGHLQHHSLHASYVRGAGGQ*SSNGAV Trigger: AACAGCGCCATTGGAGGACCACTGGCCTCCTGCACC...ACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTGTCCTCTGTGCCTTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTCCTATCACAACCTTCTaGTGGGCAGGGATAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSPITTF*WAGIGP Trigger: AGGCCCTATCCCTGCCCAGCAGAAGGTTGTGATAGG...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGGCTGAGTCTGGGACATaGTACACACACCCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKAESGT*YTHPGV Trigger: GACCCCTGGGTGTGTGTACCATGTCCCAGACTCAGC...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTGAGAGGAGGTGGAAGTaGTGGATGGCGGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSERRWK*WMAAIR Trigger: TCTTATCGCCGCCATCCACCACTTCCACCTCCTCTC...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTAGGCCAGAGAGGAGGTaGAAGTGGTGGATGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFRPERR*KWWMAA Trigger: CGCCGCCATCCACCACTTCCACCTCCTCTCTGGCCT...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGTGGGTAGGAAGGAGGTaGCTGGTAGGCCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKWVGRR*LVGQRG Trigger: TCCTCTCTGGCCTACCAGCCACCTCCTTCCTACCCA...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGACCTGGGTCCATAGCTaGCTTGGGGGATGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKTWVHS*LGGWVG Trigger: TCCTACCCATCCCCCAAGCCAGCTATGGACCCAGGT...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTTGAAGCTGGAGGGGTaGCCCCTTGCAAGATGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFLKLEG*PLARCP Trigger: CGGGCATCTTGCAAGGGGTCACCCCTCCAGCTTCAA...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTACCCAGGACCAGAGGCTaGAGACTGGGCAGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLPRTRG*RLGRWR Trigger: CCTCCATCTGCCCAGTCTTCAGCCTCTGGTCCTGGG...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTTCCTGGTTCGAGAGGTaGAGGAGGCCAGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFSWFER*RRPVVL Trigger: GAGGACCACTGGCCTCCTGCACCTCTCGAACCAGGA...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTGGCACCAGGGTACTGTaGGTCAATGGAGAATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSGTRVL*VNGEFA Trigger: GGCAAATTCTCCATTGACCCACAGTACCCTGGTGCC...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGCTTCTGGATAGCAGCTaGCACCAGGGTACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKLLDSS*HQGTVG Trigger: ACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAG...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCGGGTCCCGTGGCCAGTaGGTTGGGGGAGGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPGSRGQ*VGGGGG Trigger: ACCTCCGCCTCCCCCAACCCACTGGCCACGGGACCC...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGGAGAGGAGGTGGAAGTaGTGGATGGCGGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKERRWK*WMAAIR Trigger: TCTTATCGCCGCCATCCACCACTTCCACCTCCTCTC...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTCATAGGAATGAGACCTaGGTCCATAGCTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGIQGQRKGLADHSQTSHRNET*VHSWLG Trigger: CCCAAGCCAGCTATGGACCCAGGTCTCATTCCTATG...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGGCCAGCAGCACCGTGTaGATCTCTCTGGCACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKASSTV*ISLARR Trigger: TCTCCGTGCCAGAGAGATCCACACGGTGCTGCTGGC...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGACGGATGGTAGAGAGTaGCGTGAGTGGAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKTDGRE*REWRGH Trigger: GTGCCCCCTCCACTCACGCCACTCTCTACCATCCGT...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATGGATTCGGATGTGCCTaGTCAGCTCATCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHGFGCA*SAHQSV Trigger: CACGCTCTGATGAGCTGACCAGGCACATCCGAATCC...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATGCCGAAGGTGGATCTTaGTGTGGCGCTTCCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHAEGGS*CGASFR Trigger: ACGAAAGGAAGCGCCACACCAAGATCCACCTTCGGC...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTGGTGCAGGAGGCCAGTaGTCCTCCAATGGCGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFGAGGQ*SSNGAV Trigger: AACAGCGCCATTGGAGGACCACTGGCCTCCTGCACC...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACGGTGGCAGTCACTGCTaGAGACCCACTGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYGGSHC*RPTARQ Trigger: CTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACC...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGGTGTGGATTCGGATGTaGCTGGTCAGCTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKVWIRM*LVSSSE Trigger: CTCTGATGAGCTGACCAGGCACATCCGAATCCACAC...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTATCCTGGTTCGAGAGGTaGAGGAGGCCAGTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLSWFER*RRPVVL Trigger: GAGGACCACTGGCCTCCTGCACCTCTCGAACCAGGA...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTAAGGAGGAGGAGGTGGTaGCGGAGAGTAGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLRRRRW*RRVEVV Trigger: GACCACCTCTACTCTCCGCCACCACCTCCTCCTCCT...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACAGAGAGTGGCGTGAGTaGAGGGGGCACTCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYREWRE*RGHSQG Trigger: TCCCTGCGAGTGCCCCCTCCACTCACGCCACTCTCT...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTAACGGATGGTAGAGAGTaGCGTGAGTGGAGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLTDGRE*REWRGH Trigger: GTGCCCCCTCCACTCACGCCACTCTCTACCATCCGT...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATATCACAACCTTCTGCTaGGCAGGGATAGGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHITTFC*AGIGPF Trigger: GAAAGGCCCTATCCCTGCCCAGCAGAAGGTTGTGAT...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCCTATCACAACCTTCTaGTGGGCAGGGATAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFPITTF*WAGIGP Trigger: AGGCCCTATCCCTGCCCAGCAGAAGGTTGTGATAGG...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTATGGGTAGGAAGGAGGTaGCTGGTAGGCCAGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLWVGRR*LVGQRG Trigger: TCCTCTCTGGCCTACCAGCCACCTCCTTCCTACCCA...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCGGATTCGGATGTGCCTaGTCAGCTCATCAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFGFGCA*SAHQSV Trigger: CACGCTCTGATGAGCTGACCAGGCACATCCGAATCC...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCGCCGAAGGTGGATCTTaGTGTGGCGCTTCCTTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFAEGGS*CGASFR Trigger: ACGAAAGGAAGCGCCACACCAAGATCCACCTTCGGC...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCGGTGGCAGTCACTGCTaGAGACCCACTGCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPGGSHC*RPTARQ Trigger: CTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACC...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTGTGTGGATTCGGATGTaGCTGGTCAGCTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFVWIRM*LVSSSE Trigger: CTCTGATGAGCTGACCAGGCACATCCGAATCCACAC...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACGCCACTCCGTTCATCTaGTCAAAGGGGCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYATPFI*SKGPPS Trigger: ACTGGGAGGCCCCTTTGACCAGATGAACGGAGTGGC...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCGGCACCAGGGTACTGTaGGTCAATGGAGAATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFGTRVL*VNGEFA Trigger: GGCAAATTCTCCATTGACCCACAGTACCCTGGTGCC...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGATTGATGATACCTTCTaGATAGCAGCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKIDDTF*IAAGTR Trigger: CCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAAT...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCAGGCCAGAGAGGAGGTaGAAGTGGTGGATGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPRPERR*KWWMAA Trigger: CGCCGCCATCCACCACTTCCACCTCCTCTCTGGCCT...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCATAGGAATGAGACCTaGGTCCATAGCTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GANIALSCPTLHFHSLEFHRNET*VHSWLG Trigger: CCCAAGCCAGCTATGGACCCAGGTCTCATTCCTATG...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGCAGTCATGTCAATGTTaGTCATGCCATCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKQSCQC*SCHLPP Trigger: TGGCGGGAGATGGCATGATCAACATTGACATGACTG...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 |
||
| CDS-3UTR TCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACTGGTCCAGTTCAGGCTaGGTCTGGGACATGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYWSSSG*VWDMVH Trigger: GTGTACCATGTCCCAGACTCAGCCTGAACTGGACCA...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCGTGTGGGTTCGGATGTaGGTAGTAAGGTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EPILLCPARHCTSILLSFVWVRM*VVRWSL Trigger: AAGTGACCACCTTACTACTCACATCCGAACCCACAC...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATGGTACTGTGGGTCAATaGAGAATTTGCCCATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSLRTTGIQGQRKGLADHGTVGQ*RICPCK Trigger: CTTACATGGGCAAATTCTCCATTGACCCACAGTACC...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACGAGAGGAGGTGGAAGTaGTGGATGGCGGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYERRWK*WMAAIR Trigger: TCTTATCGCCGCCATCCACCACTTCCACCTCCTCTC...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCTTCGAGGTCGCAGGATaGGCCGCAATGGCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPFEVAG*AAMAGG Trigger: ACCACCTGCCATTGCGGCCCATCCTGCGACCTCGAA...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTAATCACAACCTTCTGCTaGGCAGGGATAGGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ANIALSCPTLHFHSLEFLITTFC*AGIGPF Trigger: GAAAGGCCCTATCCCTGCCCAGCAGAAGGTTGTGAT...TAGAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCGGTGCAGGAGGCCAGTaGTCCTCCAATGGCGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPGAGGQ*SSNGAV Trigger: AACAGCGCCATTGGAGGACCACTGGCCTCCTGCACC...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACGGTCTGGTTTCTAGGTaGAGAGATGGGAGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQISGSDIEAHSHLKFGYGLVSR*RDGSEA Trigger: AGCTTCGCTCCCATCTCTGCACCTAGAAACCAGACC...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCATCCTGTACACATGCAGACCCTGTTAACACTGCCCACATCACACAAGAAATCCAGGATAGTCTaGGATCATAGGAATGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VRHPVHMQTLLTLPTSHKKSRIV*DHRNET Trigger: GGTCTCATTCCTATGATCCCAGACTATCCTGGATTT...CTTGTGTGATGTGGGCAGTGTTAACAGGGTCTGCATGTGTACAGGATGCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTCGATCAAAGGAATCAGCAACTCCCAACCTATTGTAGAAAAAGTCTCAGAGTGTGGGTTCGGATGTaGGTAGTAAGGTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLDQRNQQLPTYCRKSLRVWVRM*VVRWSL Trigger: AAGTGACCACCTTACTACTCACATCCGAACCCACAC...TCTGAGACTTTTTCTACAATAGGTTGGGAGTTGCTGATTCCTTTGATCGAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGCAGAAATATACAGCCATACTTAAACCCAAGGAGTGATTTTTCTGTTCCCCCTATCACAACCTTCTaGTGGGCAGGGATAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGRNIQPYLNPRSDFSVPPITTF*WAGIGP Trigger: AGGCCCTATCCCTGCCCAGCAGAAGGTTGTGATAGG...GGGAACAGAAAAATCACTCCTTGGGTTTAAGTATGGCTGTATATTTCTGCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCGATCAAAGGAATCAGCAACTCCCAACCTATTGTAGAAAAAGTCTCAGAATTGATGATACCTTCTaGATAGCAGCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLDQRNQQLPTYCRKSLRIDDTF*IAAGTR Trigger: CCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAAT...TCTGAGACTTTTTCTACAATAGGTTGGGAGTTGCTGATTCCTTTGATCGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGAAATCCAGGATAGTCTaGGATCATAGGAATGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HLQHHSLHASYVRPPLNKKSRIV*DHRNET Trigger: GGTCTCATTCCTATGATCCCAGACTATCCTGGATTT...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGCCCGTGGCCAGTGGGTaGGGGGAGGCGGAGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GTELGSIKVLCPDHGIMGPVASG*GEAEVT Trigger: CGTCACCTCCGCCTCCCCCAACCCACTGGCCACGGG...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATCCCGTGGCCAGTGGGTaGGGGGAGGCGGAGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RWDRAGLHQGPLPRSRDHPVASG*GEAEVT Trigger: CGTCACCTCCGCCTCCCCCAACCCACTGGCCACGGG...ATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCCACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 90 bp | CCGCCACTCCGTTCATCTGGTCAAAGGGGCCTCCCAGTTCACCATTaGGGAAGATGGTCACCGACGAGGCGGCGAGGTCTTCCACCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPLRSSGQRGLPVHH*GRWSPTRRRGLPPG Trigger: ACCCGGTGGAAGACCTCGCCGCCTCGTCGGTGACCATCTTCCCCAATGGTGAACTGGGAGGCCCCTTTGACCAGATGAACGGAGTGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000145754.8 ENSMUST00000145936.2 |
||
| CDS CCA 90 bp | GGGCACTCGCAGGGAGTCCAGAGGACAGGGAAACGGCTTTCGATCTaGGCCAGCAGCACCGTGTGGATCTCTCTGGCACGGAGATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHSQGVQRTGKRLSI*ASSTVWISLARRWK Trigger: TTTCCATCTCCGTGCCAGAGAGATCCACACGGTGCTGCTGGCCCAGATCGAAAGCCGTTTCCCTGTCCTCTGGACTCCCTGCGAGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145936.2 |
||
| CDS-3UTR CAA 90 bp | GGGACAGAGCTGGGCTCCATCAAGGTCCTTTGCCCAGATCACGGGATCATGGGGAGAGTTACTGGGATTTaGTCTACGGCCTTGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTELGSIKVLCPDHGIMGRVTGI*STALAV Trigger: GACCGCCAAGGCCGTAGACAAAATCCCAGTAACTCT...CCCCATGATCCCGTGATCTGGGCAAAGGACCTTGATGGAGCCCAGCTCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGGCAGCTCGGACAGAGGGCCTCTGGGGCCTGGAGAAACTGGTGTGTCACCAGTCATGTCAATGTaGATCATGCCATCTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVGSSDRGPLGPGETGVSPVMSM*IMPSPA Trigger: GGCGGGAGATGGCATGATCAACATTGACATGACTGG...TGACACACCAGTTTCTCCAGGCCCCAGAGGCCCTCTGTCCGAGCTGCCAACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 |
||
| CDS CCA 90 bp | CCTATCACAACCTTCTGCTGGGCAGGGATAGGGCCTTTCGTGCACTaGCGTTTTGCTGGGCCTGTTAGGGTACTTTCGAGGTCGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PITTFCWAGIGPFVH*RFAGPVRVLSRSQD Trigger: ATCCTGCGACCTCGAAAGTACCCTAACAGGCCCAGCAAAACGCCAGTGCACGAAAGGCCCTATCCCTGCCCAGCAGAAGGTTGTGATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAATCAGCGGCAGTGACATTGAAGCACATTCTCACCTGAAATTTGGCTACCCCGTGGCCAGTGGGTaGGGGGAGGCGGAGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KQISGSDIEAHSHLKFGYPVASG*GEAEVT Trigger: CGTCACCTCCGCCTCCCCCAACCCACTGGCCACGGG...GTAGCCAAATTTCAGGTGAGAATGTGCTTCAATGTCACTGCCGCTGATTTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTCCTCCCAGTTCACCATaGGGGAAGATGGTCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTGIQGQRKGLADHSQTSPPSSP*GKMVTD Trigger: GTCGGTGACCATCTTCCCCAATGGTGAACTGGGAGG...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048289.14 |
||
| CDS-3UTR CAA 90 bp | ACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATAGTCAGACATCTTGCCGAAGGTGGATCTaGGTGTGGCGCTTCCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TTGIQGQRKGLADHSQTSCRRWI*VWRFLS Trigger: CGAAAGGAAGCGCCACACCAAGATCCACCTTCGGCA...AGATGTCTGACTATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | CACTTGCAACACCACTCACTGCATGCATCCTATGTACGTCCCCCTTTAAATAAGTGGAGGGGTGACCCCTaGCAAGATGCCCGCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLQHHSLHASYVRPPLNKWRGDP*QDARTH Trigger: GTGAGTGCGGGCATCTTGCAAGGGGTCACCCCTCCA...CTTATTTAAAGGGGGACGTACATAGGATGCATGCAGTGAGTGGTGTTGCAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS GCA 90 bp | GTCAATGGAGAATTTGCCCATGTAAGTGAAGGTCTGGTTTCTAGGTaGAGAGATGGGAGCGAAGCTACTCGGATACGGGAGATCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VNGEFAHVSEGLVSR*RDGSEATRIREIQG Trigger: CCCCTGGATCTCCCGTATCCGAGTAGCTTCGCTCCCATCTCTGCACCTAGAAACCAGACCTTCACTTACATGGGCAAATTCTCCATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 ENSMUST00000146986.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCTCAGAACAACTGGCATCCAGGGTCAACGGAAAGGGCTAGCAGACCATCCAGTCATGTCAATGTaGATCATGCCATCTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLRTTGIQGQRKGLADHPVMSM*IMPSPA Trigger: GGCGGGAGATGGCATGATCAACATTGACATGACTGG...ATGGTCTGCTAGCCCTTTCCGTTGACCCTGGATGCCAGTTGTTCTGAGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTCTGCCGAAGGTGGATCTaGGTGTGGCGCTTCCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EPILLCPARHCTSILLSFCRRWI*VWRFLS Trigger: CGAAAGGAAGCGCCACACCAAGATCCACCTTCGGCA...GAAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCCAATATTGCTTTGTCCTGCCCGACATTGCACTTCCATTCTCTTGAGTTTTGCCGAAGGTGGATCTaGGTGTGGCGCTTCCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GANIALSCPTLHFHSLEFCRRWI*VWRFLS Trigger: CGAAAGGAAGCGCCACACCAAGATCCACCTTCGGCA...AAACTCAAGAGAATGGAAGTGCAATGTCGGGCAGGACAAAGCAATATTGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 90 bp | GACCCCTTGCAAGATGCCCGCACTCACAATATTGATGATACCTTCTaGATAGCAGCTGGCACCAGGGTACTGTGGGTCAATGGAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: DPLQDARTHNIDDTF*IAAGTRVLWVNGEF Trigger: AAATTCTCCATTGACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAATATTGTGAGTGCGGGCATCTTGCAAGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 |
||
| CDS CCA 90 bp | AATATTGATGATACCTTCTGGATAGCAGCTGGCACCAGGGTACTGTaGGTCAATGGAGAATTTGCCCATGTAAGTGAAGGTCTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NIDDTFWIAAGTRVL*VNGEFAHVSEGLVS Trigger: AGAAACCAGACCTTCACTTACATGGGCAAATTCTCCATTGACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 ENSMUST00000146986.2 |
||
| CDS GCA 72 bp | CCAATGGCGCTGTTACCGCACAGGCTGCCCCCGGCCTaGGAGCCCCCAGGACCAGAGGCTGAAGACTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PMALLPHRLPPA*EPPGPEAEDWA Trigger: TGCCCAGTCTTCAGCCTCTGGTCCTGGGGGCTCGCAGGCCGGGGGCAGCCTGTGCGGTAACAGCGCCATTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS GCA 72 bp | CAGGTGGTGCGGATTATAAGGGGTGGCAGTCACTGCTaGAGACCCACTGCCAGGCAGCCGAGGTCCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QVVRIIRGGSHC*RPTARQPRSLT Trigger: GGTGAGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACCCCTTATAATCCGCACCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS GCA 72 bp | TGGCAGGTGGTGCGGATTATAAGGGGTGGCAGTCACTaGTGCAGACCCACTGCCAGGCAGCCGAGGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WQVVRIIRGGSH*CRPTARQPRSL Trigger: GAGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACCCCTTATAATCCGCACCACCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 72 bp | TCACGGTGTCCTGGTTCGAGAGGTGCAGGAGGCCAGTaGTCCTCCAATGGCGCTGTTACCGCACAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRCPGSRGAGGQ*SSNGAVTAQAA Trigger: GGCAGCCTGTGCGGTAACAGCGCCATTGGAGGACCACTGGCCTCCTGCACCTCTCGAACCAGGACACCGTGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 72 bp | CAGGGAGTCCAGAGGACAGGGAAACGGCTTTCGATCTaGGCCAGCAGCACCGTGTGGATCTCTCTGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QGVQRTGKRLSI*ASSTVWISLAR Trigger: CCGTGCCAGAGAGATCCACACGGTGCTGCTGGCCCAGATCGAAAGCCGTTTCCCTGTCCTCTGGACTCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145936.2 |
||
| CDS GCA 72 bp | GATTATAAGGGGTGGCAGTCACTGCTGCAGACCCACTaGCAGGCAGCCGAGGTCCCTCACCACCTCCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: DYKGWQSLLQTH*QAAEVPHHLHL Trigger: CAAGTGGAGGTGGTGAGGGACCTCGGCTGCCTGGCAGTGGGTCTGCAGCAGTGACTGCCACCCCTTATAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 72 bp | CGTTCATCTGGTCAAAGGGGCCTCCCAGTTCACCATTaGGGAAGATGGTCACCGACGAGGCGGCGAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSSGQRGLPVHH*GRWSPTRRRGL Trigger: AAGACCTCGCCGCCTCGTCGGTGACCATCTTCCCCAATGGTGAACTGGGAGGCCCCTTTGACCAGATGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048289.14 ENSMUST00000130933.2 ENSMUST00000145754.8 ENSMUST00000145936.2 |
||
| CDS GCA 72 bp | CTGAAGACTGGGCAGATGGAGGTGCAGAGGGAGCACTaGTCTTCCGTTCCTTCTGCCGAAGGTGGATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKTGQMEVQREH*SSVPSAEGGSW Trigger: CCAAGATCCACCTTCGGCAGAAGGAACGGAAGAGCAGTGCTCCCTCTGCACCTCCATCTGCCCAGTCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
||
| CDS CCA 72 bp | CAGAGTAAAATTACGGATGGTAGAGAGTGGCGTGAGTaGAGGGGGCACTCGCAGGGAGTCCAGAGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSKITDGREWRE*RGHSQGVQRTG Trigger: CCCTGTCCTCTGGACTCCCTGCGAGTGCCCCCTCCACTCACGCCACTCTCTACCATCCGTAATTTTACTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS CCA 72 bp | ACCTTCTGCTGGGCAGGGATAGGGCCTTTCGTGCACTaGCGTTTTGCTGGGCCTGTTAGGGTACTTTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: TFCWAGIGPFVH*RFAGPVRVLSR Trigger: CCTCGAAAGTACCCTAACAGGCCCAGCAAAACGCCAGTGCACGAAAGGCCCTATCCCTGCCCAGCAGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 |
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| CDS CCA 72 bp | ATGTTGATCATGCCATCTCCCGCCACTCCGTTCATCTaGTCAAAGGGGCCTCCCAGTTCACCATTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MLIMPSPATPFI*SKGPPSSPLGK Trigger: CTTCCCCAATGGTGAACTGGGAGGCCCCTTTGACCAGATGAACGGAGTGGCGGGAGATGGCATGATCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000145754.8 ENSMUST00000145936.2 |
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| CDS GCA 72 bp | GAGGAGGCTGTGGTTGAAGCTGGAGGGGTGACCCCTTaGAAGATGCCCGCACTCACAATATTGATGATACCT | + |
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Preference number: 6 (lower is better) Translates to: EEAVVEAGGVTP*KMPALTILMIP Trigger: AGGTATCATCAATATTGTGAGTGCGGGCATCTTGCAAGGGGTCACCCCTCCAGCTTCAACCACAGCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 |
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| CDS TCA 72 bp | GATCCAGGGGTCTCTTCTCTCCAGTCATGTCAATGTTaGTCATGCCATCTCCCGCCACTCCGTTCATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: DPGVSSLQSCQC*SCHLPPLRSSG Trigger: ACCAGATGAACGGAGTGGCGGGAGATGGCATGATCAACATTGACATGACTGGAGAGAAGAGACCCCTGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000145754.8 ENSMUST00000145936.2 |
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| CDS CCA 72 bp | AAATCCAGGATAGTCTGGGATCATAGGAATGAGACCTaGGTCCATAGCTGGCTTGGGGGATGGGTAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: KSRIVWDHRNET*VHSWLGGWVGR Trigger: CCTTCCTACCCATCCCCCAAGCCAGCTATGGACCCAGGTCTCATTCCTATGATCCCAGACTATCCTGGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145936.2 |
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| CDS CAA 72 bp | AGATCCAGGGGTCTCTTCTCTCCAGTCATGTCAATGTaGATCATGCCATCTCCCGCCACTCCGTTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSRGLFSPVMSM*IMPSPATPFIW Trigger: CCAGATGAACGGAGTGGCGGGAGATGGCATGATCAACATTGACATGACTGGAGAGAAGAGACCCCTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048289.14 ENSMUST00000145754.8 ENSMUST00000145936.2 |
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| CDS GCA 72 bp | GAATTTGCCCATGTAAGTGAAGGTCTGGTTTCTAGGTaGAGAGATGGGAGCGAAGCTACTCGGATACGGGAG | + |
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Preference number: 6 (lower is better) Translates to: EFAHVSEGLVSR*RDGSEATRIRE Trigger: CTCCCGTATCCGAGTAGCTTCGCTCCCATCTCTGCACCTAGAAACCAGACCTTCACTTACATGGGCAAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 ENSMUST00000146986.2 |
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| CDS CCA 72 bp | CAAGATGCCCGCACTCACAATATTGATGATACCTTCTaGATAGCAGCTGGCACCAGGGTACTGTGGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: QDARTHNIDDTF*IAAGTRVLWVN Trigger: ATTGACCCACAGTACCCTGGTGCCAGCTGCTATCCAGAAGGTATCATCAATATTGTGAGTGCGGGCATCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000048289.14 ENSMUST00000105438.9 ENSMUST00000127820.2 ENSMUST00000145754.8 ENSMUST00000145936.2 ENSMUST00000146986.2 |
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