Pregenerated sensors for EGR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038418Ensembl transcript IDs: ENSMUST00000064795.6, ENSMUST00000165033.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGTTGGCCAACGGTCCTTCTACTCGTGAGTAGAAGGACTTGGCTCTaGGATCTTCCATCTGACCTAAGAGGTGGCCCCTCTTGCGGCCAT | + |
Preference number: 1 (lower is better) Translates to: CWPTVLLLVSRRTWL*DLPSDLRGGPSCGH Trigger: ATGGCCGCAAGAGGGGCCACCTCTTAGGTCAGATGGAAGATCTCAGAGCCAAGTCCTTCTACTCACGAGTAGAAGGACCGTTGGCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR TCA 90 bp | CTGAAGGGAGCAAGGGCCAGGCATGTGATGGAGAGGATACTGAAATaGTTTATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTG | + |
Preference number: 1 (lower is better) Translates to: LKGARARHVMERILK*FIQYHANQVLWIEV Trigger: CACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGATAAATCATTTCAGTATCCTCTCCATCACATGCCTGGCCCTTGCTCCCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGGCTGTTTCAGGCAGCTaGAGTCAAAGGGAACAGGAC | + |
Preference number: 2 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKAVSGS*SQREQD Trigger: GTCCTGTTCCCTTTGACTTCAGCTGCCTGAAACAGC...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGAGAAGGACTTGGCTCTaGGATCTTCCATCTGACCTA | + |
Preference number: 2 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRRRTWL*DLPSDL Trigger: TAGGTCAGATGGAAGATCTCAGAGCCAAGTCCTTCT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGAATCCATGGCACAGATaGTGTACAAAGATGCAGGGC | + |
Preference number: 2 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRNPWHR*CTKMQG Trigger: GCCCTGCATCTTTGTACAGCATCTGTGCCATGGATT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGAACGGAACAACACTCTaGCACATGCTCCAGTTAATA | + |
Preference number: 2 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRNGTTL*HMLQLI Trigger: TATTAACTGGAGCATGTGTCAGAGTGTTGTTCCGTT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGATAGAGGATCATCATTaGTTTGCTTGGCTTTGCTCC | + |
Preference number: 2 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKIEDHH*FAWLCS Trigger: GGAGCAAAGCCAAGCAAACCAATGATGATCCTCTAT...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGAGAGGATACTGAAATaGTTTATCCAATACCATGCA | + |
Preference number: 2 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRERILK*FIQYHA Trigger: TGCATGGTATTGGATAAATCATTTCAGTATCCTCTC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTTGCAGGGCAGGGTTCTaGGGGCCCAAACCCATTTTT | + |
Preference number: 2 (lower is better) Translates to: QPNKPYFVTCESYSRAVFCRAGF*GPKPIF Trigger: AAAAATGGGTTTGGGCCCTCAGAACCCTGCCCTGCA...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR TCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGAGAAGGACTTGGCTCTaGGATCTTCCATCTGACCTA | + |
Preference number: 2 (lower is better) Translates to: IQYHANQVLWIEVKNLDMRRTWL*DLPSDL Trigger: TAGGTCAGATGGAAGATCTCAGAGCCAAGTCCTTCT...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR GCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCCTTTTATGTCTTTCCTaGCTCTCCCTTTGCTTTCTT | + |
Preference number: 2 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSLLCLS*LSLCFL Trigger: AAGAAAGCAAAGGGAGAGGCAGGAAAGACATAAAAG...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR GCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCTTTTATGTCTTTCCTaGCTCTCCCTTTGCTTTCTT | + |
Preference number: 2 (lower is better) Translates to: CKSSPLDRGEELGHGCFRLLCLS*LSLCFL Trigger: AAGAAAGCAAAGGGAGAGGCAGGAAAGACATAAAAG...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGCAAATCAAGTCCTTTaGATAGAGGTGAAGAACTTG | + |
Preference number: 2 (lower is better) Translates to: NVTAESSQNRGSSLVCLAANQVL*IEVKNL Trigger: CAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGGAAAACAAAATCCATaGCACAGATGCTGTACAAAG | + |
Preference number: 2 (lower is better) Translates to: NVTAESSQNRGSSLVCLAGKQNP*HRCCTK Trigger: CTTTGTACAGCATCTGTGCCATGGATTTTGTTTTCC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGCAAATCAAGTCCTTTaGATAGAGGTGAAGAACTTG | + |
Preference number: 2 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLANQVL*IEVKNL Trigger: CAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR TCA 72 bp | ACGGTCCTTCTACTCGTGAGTAGAAGGACTTGGCTCTaGGATCTTCCATCTGACCTAAGAGGTGGCCCCTCT | + |
Preference number: 3 (lower is better) Translates to: TVLLLVSRRTWL*DLPSDLRGGPS Trigger: AGAGGGGCCACCTCTTAGGTCAGATGGAAGATCTCAGAGCCAAGTCCTTCTACTCACGAGTAGAAGGACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CAA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTAATAGAGGATCATCATaGGTTTGCTTGGCTTTGCTC | + |
Preference number: 3 (lower is better) Translates to: AKVSVSLTSAHVKPSARRNRGSS*VCLALL Trigger: GAGCAAAGCCAAGCAAACCAATGATGATCCTCTATT...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR TCA 72 bp | AGTGAAAGGGCTGTTGGCCAACGGTCCTTCTACTCGTaGGTAGAAGGACTTGGCTCTGAGATCTTCCATCTG | + |
Preference number: 3 (lower is better) Translates to: SERAVGQRSFYS*VEGLGSEIFHL Trigger: CAGATGGAAGATCTCAGAGCCAAGTCCTTCTACTCACGAGTAGAAGGACCGTTGGCCAACAGCCCTTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR-3UTR CAA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGTGCAAATCAAGTCCTTaGGATAGAGGTGAAGAACTT | + |
Preference number: 3 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRCKSSP*DRGEEL Trigger: AAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR TCA 72 bp | GCAAGGGCCAGGCATGTGATGGAGAGGATACTGAAATaGTTTATCCAATACCATGCAAATCAAGTCCTTTGG | + |
Preference number: 3 (lower is better) Translates to: ARARHVMERILK*FIQYHANQVLW Trigger: CCAAAGGACTTGATTTGCATGGTATTGGATAAATCATTTCAGTATCCTCTCCATCACATGCCTGGCCCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR CCA 72 bp | TTTAATTTTTCTGAAGGATACACACCACATATCCCATaGGCAATAGAGCGCATTCAATGTGTTTATAAGCCA | + |
Preference number: 3 (lower is better) Translates to: FNFSEGYTPHIP*AIERIQCVYKP Trigger: TGGCTTATAAACACATTGAATGCGCTCTATTGCCCATGGGATATGTGGTGTGTATCCTTCAGAAAAATTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064795.6 |
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CDS-3UTR GCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTTGCTGCCGCTGTTGCTaGCGCCCCCACCACCGCCCC | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRCCRCC*RPHHRP Trigger: GGGGCGGTGGTGGGGGCGGCAGCAACAGCGGCAGCA...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGTGCTGCCGCTGTTGCTaGCGCCCCCACCACCGCCCC | + |
Preference number: 4 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKCCRCC*RPHHRP Trigger: GGGGCGGTGGTGGGGGCGGCAGCAACAGCGGCAGCA...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTCCGAGTAGATGGGACTaGTGTCGTTGGACGGCACGG | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRPSRWD*CRWTAR Trigger: CCGTGCCGTCCAACGACAGCAGTCCCATCTACTCGG...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGCAGGAGGCGGGTACTaGAAGGCTGTGCCTGCCGAG | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRAGGGY*KAVPAE Trigger: CTCGGCAGGCACAGCCTTGCAGTACCCGCCTCCTGC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTTGGGACTGCTGTCGTTaGACGGCACGGCACAGCTCA | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRWDCCR*TARHSS Trigger: TGAGCTGTGCCGTGCCGTCCAACGACAGCAGTCCCA...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGGGATGGGAATGAGGTaGTGGCAGGGGATGGGTAGG | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRGMGMR*WQGMGR Trigger: CCTACCCATCCCCTGCCACCACCTCATTCCCATCCC...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTAAGTGTTGCCACTGTTaGGTGCGGGCTCCAGGGAGA | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRKCCHC*VRAPGR Trigger: TCTCCCTGGAGCCCGCACCCAACAGTGGCAACACTT...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGCTCAGGGGCGGGCTCTaGGAGGCAGAGGAAGACGAT | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRLRGGL*EAEEDD Trigger: ATCGTCTTCCTCTGCCTCCCAGAGCCCGCCCCTGAG...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTATGGGAATGAGGTGGTaGCAGGGGATGGGTAGGAGG | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRMGMRW*QGMGRR Trigger: CCTCCTACCCATCCCCTGCCACCACCTCATTCCCAT...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTTGTCCATGGTGGGTaGGTGAGGAAAGGAGCCGAA | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRVVHGG*VRKGAE Trigger: TTCGGCTCCTTTCCTCACTCACCCACCATGGACAAC...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGAGCGGCCAGTATAGGTaGTGGGAGGCAACCGAGTCG | + |
Preference number: 4 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKSGQYR*WEATES Trigger: CGACTCGGTTGCCTCCCATCACCTATACTGGCCGCT...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGTGCTGGTGCTGCTGCTaGTATTACCGCCGCTGCCCT | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRCWCCC*YYRRCP Trigger: AGGGCAGCGGCGGTAATAGCAGCAGCAGCACCAGCA...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGCCGAGTAGATGGGACTaGTGTCGTTGGACGGCACGG | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRPSRWD*CRWTAR Trigger: CCGTGCCGTCCAACGACAGCAGTCCCATCTACTCGG...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCGGTTCTCCAGACCCTaGAAGGGCTTCTGGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKRFSRP*KGFWSG Trigger: CCCAGACCAGAAGCCCTTCCAGGGTCTGGAGAACCG...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGGGATGGGAATGAGGTaGTGGCAGGGGATGGGTAGG | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRGMGMR*WQGMGR Trigger: CCTACCCATCCCCTGCCACCACCTCATTCCCATCCC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGACTGGGGAGCCCCGTTaGTCAGCAGCATCATCTCCT | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRTGEPR*SAASSP Trigger: AGGAGATGATGCTGCTGAGCAACGGGGCTCCCCAGT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGGGAGTGAGCGAAGGCTaGTGGGTACGGTTCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKGVSEG*WVRFSR Trigger: TCTGGAGAACCGTACCCAGCAGCCTTCGCTCACTCC...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTAGGAGGTAGCCACTaGGGATGGGTAAGAAGAGAG | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRVGGSH*GWVRRE Trigger: CTCTCTTCTTACCCATCCCCAGTGGCTACCTCCTAC...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGTTGTCCATGGTGGGTaGGTGAGGAAAGGAGCCGAA | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRVVHGG*VRKGAE Trigger: TTCGGCTCCTTTCCTCACTCACCCACCATGGACAAC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGTCCTGGGAGCCCGACTaGGTGGCGAAGGCTTTAATA | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRSWEPD*VAKALI Trigger: TATTAAAGCCTTCGCCACTCAGTCGGGCTCCCAGGA...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTAACGGGTCAGAGATCTaGAGCGGAGACATCAATTGC | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRNGSEI*SGDINC Trigger: GCAATTGATGTCTCCGCTGCAGATCTCTGACCCGTT...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTTCATCTCCTCCAGTTTaGGGTAGTTGTCCATGGTGG | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRSSPPV*GSCPWW Trigger: CCACCATGGACAACTACCCCAAACTGGAGGAGATGA...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGTGTGGATGCGGATATaGCGGGTAAGCTCATCCGAG | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRVWMRI*RVSSSE Trigger: CTCGGATGAGCTTACCCGCCATATCCGCATCCACAC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCCGCCCCCGCTGCTGGTaGTGCTGCTGCTATTACCGC | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSRPRCW*CCCYYR Trigger: GCGGTAATAGCAGCAGCAGCACCAGCAGCGGGGGCG...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGCGCTGCTGCCGCTGTTaGTGCCGCCCCCACCACCGC | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMRCCRC*CRPHHR Trigger: GCGGTGGTGGGGGCGGCAGCAACAGCGGCAGCAGCG...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCGCCCCCGCTGCTGGTaGTGCTGCTGCTATTACCGC | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRRPRCW*CCCYYR Trigger: GCGGTAATAGCAGCAGCAGCACCAGCAGCGGGGGCG...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCTCCCTGTTGTTGTaGAAACAGATAGTCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: AKVSVSLTSAHVKPSARRVSLLL*KQIVRD Trigger: ATCCCTGACTATCTGTTTCCACAACAACAGGGAGAC...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGAAGGGCTTCTGGTCTaGGGTGCCCAGGCTCAGGTC | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSEGLLV*GAQAQV Trigger: GACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTC...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGACGGGAAGCTGCTaGCCTGGGTGGGGAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRQTGSC*PGWGKQ Trigger: CTGCTTTCCCCACCCAGGTCAGCAGCTTCCCGTCTG...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTACGCTGCTGCCGCTGTTaGTGCCGCCCCCACCACCGC | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLRCCRC*CRPHHR Trigger: GCGGTGGTGGGGGCGGCAGCAACAGCGGCAGCAGCG...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGGGTGGTGGCAGGGGATaGGTAGGAGGTAGCCACTGG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRGGGRG*VGGSHW Trigger: CCAGTGGCTACCTCCTACCCATCCCCTGCCACCACC...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGTCCATGGTGGGTGAGTaGGGAAAGGAGCCGAACGGG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRSMVGE*GKEPNG Trigger: CCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGA...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGCACCACCGCCCCCGCTaGTGGTGCTGCTGCTGCTAT | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMHHRPR*WCCCCY Trigger: ATAGCAGCAGCAGCACCAGCAGCGGGGGCGGTGGTG...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGCAGGAGGCGGGTACTaGAAGGCTGTGCCTGCCGAG | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAAGGGY*KAVPAE Trigger: CTCGGCAGGCACAGCCTTGCAGTACCCGCCTCCTGC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCAGCACCGAGGAACTaGGGAGCCCCGTTGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMAAPRN*GAPLLS Trigger: GCTGAGCAACGGGGCTCCCCAGTTCCTCGGTGCTGC...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCAAGTGTTGCCACTGTTaGGTGCGGGCTCCAGGGAGA | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSKCCHC*VRAPGR Trigger: TCTCCCTGGAGCCCGCACCCAACAGTGGCAACACTT...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTCCCTGGAAGGGCTTCTaGTCTGGGGTGCCCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAPWKGF*SGVPRL Trigger: GAGCCTGGGCACCCCAGACCAGAAGCCCTTCCAGGG...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTAAAGGTGGTGGCCACTaGCGGCGACGGGAAGCCACT | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAKGGGH*RRREAT Trigger: AGTGGCTTCCCGTCGCCGTCAGTGGCCACCACCTTT...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGCAGACGGGAAGCTGCTaGCCTGGGTGGGGAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMQTGSC*PGWGKQ Trigger: CTGCTTTCCCCACCCAGGTCAGCAGCTTCCCGTCTG...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCAGCGGAGACATCAATTaGATCTCGGCCTTGGCCGCT | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSSGDIN*ISALAA Trigger: AGCGGCCAAGGCCGAGATGCAATTGATGTCTCCGCT...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTCACCACCGCCCCCGCTaGTGGTGCTGCTGCTGCTAT | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFHHRPR*WCCCCY Trigger: ATAGCAGCAGCAGCACCAGCAGCGGGGGCGGTGGTG...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGGCCACAAAGTGTTaGCACTGTTGGGTGCGGGCT | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRQATKC*HCWVRA Trigger: AGCCCGCACCCAACAGTGGCAACACTTTGTGGCCTG...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGCTGCAAGGCTGTGCCTaGCGAGCCAGGAAAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMLQGCA*RARKGL Trigger: CAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTGCAG...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGCAGCACCGAGGAACTaGGGAGCCCCGTTGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFAAPRN*GAPLLS Trigger: GCTGAGCAACGGGGCTCCCCAGTTCCTCGGTGCTGC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCCTGGAAACCACCTTTaGTGGCAGGGTAGGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRPGNHL*WQGRQE Trigger: CTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGG...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGAAGGGCTTCTGGTCTaGGGTGCCCAGGCTCAGGTC | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAEGLLV*GAQAQV Trigger: GACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTCCCTGGAAGGGCTTCTaGTCTGGGGTGCCCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFPWKGF*SGVPRL Trigger: GAGCCTGGGCACCCCAGACCAGAAGCCCTTCCAGGG...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGAGCGGCCAGTATAGGTaGTGGGAGGCAACCGAGTCG | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMSGQYR*WEATES Trigger: CGACTCGGTTGCCTCCCATCACCTATACTGGCCGCT...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGTGGGTAAGAAGAGAGTaGAGAGGCAGCCGGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMWVRRE*RGSRGG Trigger: GCCTCCCCGGCTGCCTCTTCACTCTCTTCTTACCCA...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGTGCTGGTGCTGCTGCTaGTATTACCGCCGCTGCCCT | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMCWCCC*YYRRCP Trigger: AGGGCAGCGGCGGTAATAGCAGCAGCAGCACCAGCA...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGAAATGGATTTTGGTATaGCTCTTGCGTTCATCACTC | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRKWILV*LLRSSL Trigger: GAGTGATGAACGCAAGAGGCATACCAAAATCCATTT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCTGGGGTAGTTGTCCATaGTGGGTGAGTGAGGAAAGG | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSWGSCP*WVSEER Trigger: CCTTTCCTCACTCACCCACCATGGACAACTACCCCA...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTTGGGACTGCTGTCGTTaGACGGCACGGCACAGCTCA | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAWDCCR*TARHSS Trigger: TGAGCTGTGCCGTGCCGTCCAACGACAGCAGTCCCA...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGGGATCATGGGAACCTaGAAACCACCTTTGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSGIMGT*KPPLVA Trigger: TGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCC...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTCGGTTCTCCAGACCCTaGAAGGGCTTCTGGTCTGGG | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLARFSRP*KGFWSG Trigger: CCCAGACCAGAAGCCCTTCCAGGGTCTGGAGAACCG...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGGTGGTGGCAGGGGATaGGTAGGAGGTAGCCACTGG | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFGGGRG*VGGSHW Trigger: CCAGTGGCTACCTCCTACCCATCCCCTGCCACCACC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGAAATTTCAATTGTCCTaGGAGAAAAGGTCGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRKFQLS*EKRSLS Trigger: TGACAGCGACCTTTTCTCCCAGGACAATTGAAATTT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAAAAGGTGGTGGCCACTaGCGGCGACGGGAAGCCACT | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLKGGGH*RRREAT Trigger: AGTGGCTTCCCGTCGCCGTCAGTGGCCACCACCTTT...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTCAGGCCACAAAGTGTTaGCACTGTTGGGTGCGGGCT | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAQATKC*HCWVRA Trigger: AGCCCGCACCCAACAGTGGCAACACTTTGTGGCCTG...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTACTGCAAGGCTGTGCCTaGCGAGCCAGGAAAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLLQGCA*RARKGL Trigger: CAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTGCAG...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTACTCAGGGGCGGGCTCTaGGAGGCAGAGGAAGACGAT | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLLRGGL*EAEEDD Trigger: ATCGTCTTCCTCTGCCTCCCAGAGCCCGCCCCTGAG...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGCGCAGCCGAGTAGATaGGACTGCTGTCGTTGGACG | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFAQPSR*DCCRWT Trigger: CGTCCAACGACAGCAGTCCCATCTACTCGGCTGCGC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGTGAGCGAAGGCTGCTaGGTACGGTTCTCCAGACCC | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFVSEGC*VRFSRP Trigger: GGGTCTGGAGAACCGTACCCAGCAGCCTTCGCTCAC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGGCTTCTGGCCTGTGTaGATGCGGATATGGCGGGTA | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMGFWPV*MRIWRV Trigger: TACCCGCCATATCCGCATCCACACAGGCCAGAAGCC...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGATGCAGATTCGACACTaGAAGGGCTTCTGGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRMQIRH*KGFWPV Trigger: CACAGGCCAGAAGCCCTTCCAGTGTCGAATCTGCAT...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGGTCTTAAATGGATTTTaGTATGCCTCTTGCGTTCAT | + |
Preference number: 4 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRVLNGF*YASCVH Trigger: ATGAACGCAAGAGGCATACCAAAATCCATTTAAGAC...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGGTGGGGAAAGCAGGTaGAACGGAGGCAAAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAGGESR*NGGKGG Trigger: ACCACCTTTGCCTCCGTTCCACCTGCTTTCCCCACC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGTCCTGGGAGCCCGACTaGGTGGCGAAGGCTTTAATA | + |
Preference number: 4 (lower is better) Translates to: IQYHANQVLWIEVKNLDMSWEPD*VAKALI Trigger: TATTAAAGCCTTCGCCACTCAGTCGGGCTCCCAGGA...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTATGGGTAAGAAGAGAGTaGAGAGGCAGCCGGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLWVRRE*RGSRGG Trigger: GCCTCCCCGGCTGCCTCTTCACTCTCTTCTTACCCA...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGGAGTGAGCGAAGGCTaGTGGGTACGGTTCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFGVSEG*WVRFSR Trigger: TCTGGAGAACCGTACCCAGCAGCCTTCGCTCACTCC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGTCATCTCCTCCAGTTTaGGGTAGTTGTCCATGGTGG | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRSSPPV*GSCPWW Trigger: CCACCATGGACAACTACCCCAAACTGGAGGAGATGA...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGCGCAGCCGAGTAGATaGGACTGCTGTCGTTGGACG | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLAQPSR*DCCRWT Trigger: CGTCCAACGACAGCAGTCCCATCTACTCGGCTGCGC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTCCTGGAAACCACCTTTaGTGGCAGGGTAGGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFPGNHL*WQGRQE Trigger: CTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGG...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGATAGTCAGGGATCATaGGAACCTGGAAACCACCTT | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSDSQGS*EPGNHL Trigger: AAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATC...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGTGAGCGAAGGCTGCTaGGTACGGTTCTCCAGACCC | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLVSEGC*VRFSRP Trigger: GGGTCTGGAGAACCGTACCCAGCAGCCTTCGCTCAC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGCGGAGACATCAATTaGATCTCGGCCTTGGCCGCT | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFSGDIN*ISALAA Trigger: AGCGGCCAAGGCCGAGATGCAATTGATGTCTCCGCT...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGTGTGGATGCGGATATaGCGGGTAAGCTCATCCGAG | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFVWMRI*RVSSSE Trigger: CTCGGATGAGCTTACCCGCCATATCCGCATCCACAC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGGCTTCTGGCCTGTGTaGATGCGGATATGGCGGGTA | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLGFWPV*MRIWRV Trigger: TACCCGCCATATCCGCATCCACACAGGCCAGAAGCC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGGTGGGGAAAGCAGGTaGAACGGAGGCAAAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLGGESR*NGGKGG Trigger: ACCACCTTTGCCTCCGTTCCACCTGCTTTCCCCACC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTAACGGGTCAGAGATCTaGAGCGGAGACATCAATTGC | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLANGSEI*SGDINC Trigger: GCAATTGATGTCTCCGCTGCAGATCTCTGACCCGTT...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGTTTTGGTATGCCTCTTaGGTTCATCACTCCTGGCAA | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRFWYAS*VHHSWQ Trigger: TTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAA...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTGGTAGTTGTCCATGGTaGGTGAGTGAGGAAAGGAGC | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFGSCPW*VSEERS Trigger: GCTCCTTTCCTCACTCACCCACCATGGACAACTACC...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGAGCCAGGAAAGGCCTaGCTTTGGGGCTCAGGAAAA | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLEPGKA*LWGSGK Trigger: TTTTCCTGAGCCCCAAAGCCAGGCCTTTCCTGGCTC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTATGCAGATTCGACACTaGAAGGGCTTCTGGCCTGTG | + |
Preference number: 4 (lower is better) Translates to: QPNKPYFVTCESYSRAVFMQIRH*KGFWPV Trigger: CACAGGCCAGAAGCCCTTCCAGTGTCGAATCTGCAT...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGATGTGGGTGGTAAGGTaGTCACTACGACTGAAGTTA | + |
Preference number: 4 (lower is better) Translates to: CKSSPLDRGEELGHGCFRMWVVR*SLRLKL Trigger: TAACTTCAGTCGTAGTGACCACCTTACCACCCACAT...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGAGAGGAGTAGGAAGTaGGCACAGGGGATGGGAATG | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLERSRK*AQGMGM Trigger: CATTCCCATCCCCTGTGCCCACTTCCTACTCCTCTC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTATGGGGTAGTTGTCCATaGTGGGTGAGTGAGGAAAGG | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLWGSCP*WVSEER Trigger: CCTTTCCTCACTCACCCACCATGGACAACTACCCCA...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGATAGTCAGGGATCATaGGAACCTGGAAACCACCTT | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLADSQGS*EPGNHL Trigger: AAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR TCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGGTGGTCACTACGACTaGAGTTACGCATGCAGATTC | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLGGHYD*SYACRF Trigger: GAATCTGCATGCGTAACTTCAGTCGTAGTGACCACC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTTTTTGGTATGCCTCTTaGGTTCATCACTCCTGGCAA | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAFWYAS*VHHSWQ Trigger: TTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAA...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTGTCTCCCTGTTGTTGTaGAAACAGATAGTCAGGGAT | + |
Preference number: 4 (lower is better) Translates to: NVTAESSQNRGSSLVCLAVSLLL*KQIVRD Trigger: ATCCCTGACTATCTGTTTCCACAACAACAGGGAGAC...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CCA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGTCTTAAATGGATTTTaGTATGCCTCTTGCGTTCAT | + |
Preference number: 4 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSVLNGF*YASCVH Trigger: ATGAACGCAAGAGGCATACCAAAATCCATTTAAGAC...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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3UTR CAA 72 bp | GAAATGATTTATCCAATACCATGCAAATCAAGTCCTTaGGATAGAGGTGAAGAACTTGGACATGGCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: EMIYPIPCKSSP*DRGEELGHGCF Trigger: GAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGATAAATCATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR GCA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAAAATGGATTTTGGTATaGCTCTTGCGTTCATCACTC | + |
Preference number: 4 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLKWILV*LLRSSL Trigger: GAGTGATGAACGCAAGAGGCATACCAAAATCCATTT...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GGACTGCTGTCGTTGGACGGCACGGCACAGCTCAGGGGCGGGCTCTaGGAGGCAGAGGAAGACGATGAAGCAGCTGGAGAAGGCGCCGAG | + |
Preference number: 5 (lower is better) Translates to: GLLSLDGTAQLRGGL*EAEEDDEAAGEGAE Trigger: CTCGGCGCCTTCTCCAGCTGCTTCATCGTCTTCCTCTGCCTCCCAGAGCCCGCCCCTGAGCTGTGCCGTGCCGTCCAACGACAGCAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 90 bp | CACCTTTGGTGGCAGGGTAGGCAGGAGGCGGGTACTGCAAGGCTGTaGCTGCCGAGCCAGGAAAGGCCTGGCTTTGGGGCTCAGGAAAAA | + |
Preference number: 5 (lower is better) Translates to: HLWWQGRQEAGTARL*LPSQERPGFGAQEK Trigger: TTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTGCAGTACCCGCCTCCTGCCTACCCTGCCACCAAAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | AGCGAAGGCTGCTGGGTACGGTTCTCCAGACCCTGGAAGGGCTTCTaGTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTTGTTGTGGAAAC | + |
Preference number: 5 (lower is better) Translates to: SEGCWVRFSRPWKGF*SGVPRLRSPCCCGN Trigger: GTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTCCAGGGTCTGGAGAACCGTACCCAGCAGCCTTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS TCA 90 bp | TGCCACTGTTGGGTGCGGGCTCCAGGGAGAAGCGGCCAGTATAGGTaGTGGGAGGCAACCGAGTCGTTTGGCTGGGATAACTCGTCTCCA | + |
Preference number: 5 (lower is better) Translates to: CHCWVRAPGRSGQYR*WEATESFGWDNSSP Trigger: TGGAGACGAGTTATCCCAGCCAAACGACTCGGTTGCCTCCCATCACCTATACTGGCCGCTTCTCCCTGGAGCCCGCACCCAACAGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TCCTACCCCCTTAAGGCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGGGCCGGTTGGGGTACTaGCGCATGCGGCTGGGTTTG | + |
Preference number: 5 (lower is better) Translates to: SYPLKAKVSVSLTSAHVKGRLGY*RMRLGL Trigger: CAAACCCAGCCGCATGCGCAAGTACCCCAACCGGCC...CTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGCCTTAAGGGGGTAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GGAACTGGGGAGCCCCGTTGCTCAGCAGCATCATCTCCTCCAGTTTaGGGTAGTTGTCCATGGTGGGTGAGTGAGGAAAGGAGCCGAACG | + |
Preference number: 5 (lower is better) Translates to: GTGEPRCSAASSPPV*GSCPWWVSEERSRT Trigger: CGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGCTGAGCAACGGGGCTCCCCAGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GGAGGCGGGTACTGCAAGGCTGTGCCTGCCGAGCCAGGAAAGGCCTaGCTTTGGGGCTCAGGAAAAATGTCAGTGTTGGGAGTAGGAAAG | + |
Preference number: 5 (lower is better) Translates to: GGGYCKAVPAEPGKA*LWGSGKMSVLGVGK Trigger: CTTTCCTACTCCCAACACTGACATTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTGCAGTACCCGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GAAACAGATAGTCAGGGATCATGGGAACCTGGAAACCACCTTTGGTaGCAGGGTAGGCAGGAGGCGGGTACTGCAAGGCTGTGCCTGCCG | + |
Preference number: 5 (lower is better) Translates to: ETDSQGSWEPGNHLW*QGRQEAGTARLCLP Trigger: CGGCAGGCACAGCCTTGCAGTACCCGCCTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | AGGCTGCTGGGTACGGTTCTCCAGACCCTGGAAGGGCTTCTGGTCTaGGGTGCCCAGGCTCAGGTCTCCCTGTTGTTGTGGAAACAGATA | + |
Preference number: 5 (lower is better) Translates to: RLLGTVLQTLEGLLV*GAQAQVSLLLWKQI Trigger: TATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTCCAGGGTCTGGAGAACCGTACCCAGCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGTCACACAAAAGGATGGGACTGCTGTCGTaGGACGGCACGGCACAGCTC | + |
Preference number: 5 (lower is better) Translates to: CPSHLRMSSHRQGVSHKRMGLLS*DGTAQL Trigger: GAGCTGTGCCGTGCCGTCCAACGACAGCAGTCCCAT...CCTTTTGTGTGACACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GTGGAAACAGATAGTCAGGGATCATGGGAACCTGGAAACCACCTTTaGTGGCAGGGTAGGCAGGAGGCGGGTACTGCAAGGCTGTGCCTG | + |
Preference number: 5 (lower is better) Translates to: VETDSQGSWEPGNHL*WQGRQEAGTARLCL Trigger: CAGGCACAGCCTTGCAGTACCCGCCTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GTGGCGAAGGCTTTAATAGTGGATAGTGGAGTGAGCGAAGGCTGCTaGGTACGGTTCTCCAGACCCTGGAAGGGCTTCTGGTCTGGGGTG | + |
Preference number: 5 (lower is better) Translates to: VAKALIVDSGVSEGC*VRFSRPWKGFWSGV Trigger: CACCCCAGACCAGAAGCCCTTCCAGGGTCTGGAGAACCGTACCCAGCAGCCTTCGCTCACTCCACTATCCACTATTAAAGCCTTCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS TCA 90 bp | CAGCAGCATCATCTCCTCCAGTTTGGGGTAGTTGTCCATGGTGGGTaGGTGAGGAAAGGAGCCGAACGGGTCAGAGATCTGCAGCGGAGA | + |
Preference number: 5 (lower is better) Translates to: QQHHLLQFGVVVHGG*VRKGAERVRDLQRR Trigger: TCTCCGCTGCAGATCTCTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | TGCTCAGCAGCATCATCTCCTCCAGTTTGGGGTAGTTGTCCATGGTaGGTGAGTGAGGAAAGGAGCCGAACGGGTCAGAGATCTGCAGCG | + |
Preference number: 5 (lower is better) Translates to: CSAASSPPVWGSCPW*VSEERSRTGQRSAA Trigger: CGCTGCAGATCTCTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GGCTCAGGTCTCCCTGTTGTTGTGGAAACAGATAGTCAGGGATCATaGGAACCTGGAAACCACCTTTGGTGGCAGGGTAGGCAGGAGGCG | + |
Preference number: 5 (lower is better) Translates to: GSGLPVVVETDSQGS*EPGNHLWWQGRQEA Trigger: CGCCTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTAGGAAAGGCCTGGCTTaGGGGCTCAGGAAAAATGTC | + |
Preference number: 5 (lower is better) Translates to: AKVSVSLTSAHVKPSARRRKGLA*GLRKNV Trigger: GACATTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCT...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | CGTTGCTCAGCAGCATCATCTCCTCCAGTTTGGGGTAGTTGTCCATaGTGGGTGAGTGAGGAAAGGAGCCGAACGGGTCAGAGATCTGCA | + |
Preference number: 5 (lower is better) Translates to: RCSAASSPPVWGSCP*WVSEERSRTGQRSA Trigger: TGCAGATCTCTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGCTGAGCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTGCTCAGGTCTCCCTGTaGTTGTGGAAACAGATAGTC | + |
Preference number: 5 (lower is better) Translates to: AKVSVSLTSAHVKPSARRAQVSL*LWKQIV Trigger: GACTATCTGTTTCCACAACAACAGGGAGACCTGAGC...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCATGGGACTGCTGTCGTaGGACGGCACGGCACAGCTC | + |
Preference number: 5 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSMGLLS*DGTAQL Trigger: GAGCTGTGCCGTGCCGTCCAACGACAGCAGTCCCAT...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | GCTAAGGTGAGCGTGTCCCTCACATCTGCGCATGTCAAGCCATCGGCAAGGCGTTTTGATGAGCTGGGATaGGTAGGTGGTATTAAGAGC | + |
Preference number: 5 (lower is better) Translates to: AKVSVSLTSAHVKPSARRFDELG*VGGIKS Trigger: GCTCTTAATACCACCTACCAATCCCAGCTCATCAAA...ACGCCTTGCCGATGGCTTGACATGCGCAGATGTGAGGGACACGCTCACCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | CCATCGCCTTCTCATTATTCAGAGCGATGTCAGAAAAGGACTCTGTaGTCAGGTGCTCATAGGGTTGTTCGCTCGGCTCCCCTTGAGGAT | + |
Preference number: 5 (lower is better) Translates to: PSPSHYSERCQKRTL*SGAHRVVRSAPLED Trigger: ATCCTCAAGGGGAGCCGAGCGAACAACCCTATGAGCACCTGACCACAGAGTCCTTTTCTGACATCGCTCTGAATAATGAGAAGGCGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGAAAGTGTTGCCACTGTaGGGTGCGGGCTCCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: CKSSPLDRGEELGHGCFRKVLPL*GAGSRE Trigger: CTCCCTGGAGCCCGCACCCAACAGTGGCAACACTTT...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTCAGCGGAGACATCAATaGCATCTCGGCCTTGGCCGC | + |
Preference number: 5 (lower is better) Translates to: NVTAESSQNRGSSLVCLAQRRHQ*HLGLGR Trigger: GCGGCCAAGGCCGAGATGCAATTGATGTCTCCGCTG...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTAAAGTGTTGCCACTGTaGGGTGCGGGCTCCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: NVTAESSQNRGSSLVCLAKVLPL*GAGSRE Trigger: CTCCCTGGAGCCCGCACCCAACAGTGGCAACACTTT...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATGTCACAGCAGAGTCATCACAAAATAGAGGATCATCATTGGTTTGCTTGGCTTCAGGCCACAAAGTGTaGCCACTGTTGGGTGCGGGC | + |
Preference number: 5 (lower is better) Translates to: NVTAESSQNRGSSLVCLASGHKV*PLLGAG Trigger: GCCCGCACCCAACAGTGGCAACACTTTGTGGCCTGA...AGCCAAGCAAACCAATGATGATCCTCTATTTTGTGATGACTCTGCTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTAGGCCGGTTGGGGTACTaGCGCATGCGGCTGGGTTTG | + |
Preference number: 5 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLGRLGY*RMRLGL Trigger: CAAACCCAGCCGCATGCGCAAGTACCCCAACCGGCC...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGAGGAAAGGCCTGGCTTaGGGGCTCAGGAAAAATGTC | + |
Preference number: 5 (lower is better) Translates to: CKSSPLDRGEELGHGCFRRKGLA*GLRKNV Trigger: GACATTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCT...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGAGGCCACCACACTTTaGTCTGCTTTCTTGTCCTTC | + |
Preference number: 5 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSEATTL*SAFLSF Trigger: GAAGGACAAGAAAGCAGACAAAAGTGTGGTGGCCTC...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTATCAGGCCACAAAGTGTaGCCACTGTTGGGTGCGGGC | + |
Preference number: 5 (lower is better) Translates to: NQTNHTLSHVRVTVEQYLSGHKV*PLLGAG Trigger: GCCCGCACCCAACAGTGGCAACACTTTGTGGCCTGA...TAAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGGCTCAGGTCTCCCTGTaGTTGTGGAAACAGATAGTC | + |
Preference number: 5 (lower is better) Translates to: CKSSPLDRGEELGHGCFRAQVSL*LWKQIV Trigger: GACTATCTGTTTCCACAACAACAGGGAGACCTGAGC...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | TGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGGAGGCCACCACACTTTaGTCTGCTTTCTTGTCCTTC | + |
Preference number: 5 (lower is better) Translates to: CKSSPLDRGEELGHGCFREATTL*SAFLSF Trigger: GAAGGACAAGAAAGCAGACAAAAGTGTGGTGGCCTC...CCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 90 bp | CTGCTTTCTTGTCCTTCTGTCTTAAATGGATTTTGGTATGCCTCTTaGGTTCATCACTCCTGGCAAACTTCCTCCCACAAATGTCACAGG | + |
Preference number: 5 (lower is better) Translates to: LLSCPSVLNGFWYAS*VHHSWQTSSHKCHR Trigger: CCTGTGACATTTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | CCACACTTTTGTCTGCTTTCTTGTCCTTCTGTCTTAAATGGATTTTaGTATGCCTCTTGCGTTCATCACTCCTGGCAAACTTCCTCCCAC | + |
Preference number: 5 (lower is better) Translates to: PHFCLLSCPSVLNGF*YASCVHHSWQTSSH Trigger: GTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAGACAAAAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 90 bp | GAGGCCACCACACTTTTGTCTGCTTTCTTGTCCTTCTGTCTTAAATaGATTTTGGTATGCCTCTTGCGTTCATCACTCCTGGCAAACTTC | + |
Preference number: 5 (lower is better) Translates to: EATTLLSAFLSFCLK*ILVCLLRSSLLANF Trigger: GAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAGACAAAAGTGTGGTGGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGCAGGTCTCCCTGTTGTaGTGGAAACAGATAGTCAGG | + |
Preference number: 5 (lower is better) Translates to: IQYHANQVLWIEVKNLDMQVSLL*WKQIVR Trigger: CCTGACTATCTGTTTCCACAACAACAGGGAGACCTG...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 90 bp | CTTTTGTCTGCTTTCTTGTCCTTCTGTCTTAAATGGATTTTGGTATaGCTCTTGCGTTCATCACTCCTGGCAAACTTCCTCCCACAAATG | + |
Preference number: 5 (lower is better) Translates to: LLSAFLSFCLKWILV*LLRSSLLANFLPQM Trigger: CATTTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAGACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTCAGGTCTCCCTGTTGTaGTGGAAACAGATAGTCAGG | + |
Preference number: 5 (lower is better) Translates to: QPNKPYFVTCESYSRAVFQVSLL*WKQIVR Trigger: CCTGACTATCTGTTTCCACAACAACAGGGAGACCTG...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | ATCCAATACCATGCAAATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGATTTTGGTATGCCTCTaGCGTTCATCACTCCTGGCA | + |
Preference number: 5 (lower is better) Translates to: IQYHANQVLWIEVKNLDMILVCL*RSSLLA Trigger: TGCCAGGAGTGATGAACGCAAGAGGCATACCAAAAT...CATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATTTGCATGGTATTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | AATCAAGTCCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCCTTTTGTCTGCTTTCTaGTCCTTCTGTCTTAAATGG | + |
Preference number: 5 (lower is better) Translates to: NQVLWIEVKNLDMAVSGSLLSAF*SFCLKW Trigger: CCATTTAAGACAGAAGGACAAGAAAGCAGACAAAAG...GCTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGGACTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS-3UTR CAA 90 bp | CAACCAAACAAACCATACTTTGTCACATGTGAGAGTTACAGTCGAGCAGTATTTTTTGATGAGCTGGGATaGGTAGGTGGTATTAAGAGC | + |
Preference number: 5 (lower is better) Translates to: QPNKPYFVTCESYSRAVFFDELG*VGGIKS Trigger: GCTCTTAATACCACCTACCAATCCCAGCTCATCAAA...AAATACTGCTCGACTGTAACTCTCACATGTGACAAAGTATGGTTTGTTTGGTTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 72 bp | CCCCGCTGCTGGTGCTGCTGCTGCTATTACCGCCGCTaGCCTCTGGGGTTCCGGCAGCACCGAGGAACTGGG | + |
Preference number: 6 (lower is better) Translates to: PRCWCCCCYYRR*PLGFRQHRGTG Trigger: CCCAGTTCCTCGGTGCTGCCGGAACCCCAGAGGGCAGCGGCGGTAATAGCAGCAGCAGCACCAGCAGCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | AGGTGGGCGCAGCCGAGTAGATGGGACTGCTGTCGTTaGACGGCACGGCACAGCTCAGGGGCGGGCTCTGGG | + |
Preference number: 6 (lower is better) Translates to: RWAQPSRWDCCR*TARHSSGAGSG Trigger: CCCAGAGCCCGCCCCTGAGCTGTGCCGTGCCGTCCAACGACAGCAGTCCCATCTACTCGGCTGCGCCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | GGTCAGGTGCTCATAGGGTTGTTCGCTCGGCTCCCCTaGAGGATTGAAGGCGCTGCTGCCGCTGTTGCTGCC | + |
Preference number: 6 (lower is better) Translates to: GQVLIGLFARLP*RIEGAAAAVAA Trigger: GGCAGCAACAGCGGCAGCAGCGCCTTCAATCCTCAAGGGGAGCCGAGCGAACAACCCTATGAGCACCTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS TCA 72 bp | TGGGTGCGGGCTCCAGGGAGAAGCGGCCAGTATAGGTaGTGGGAGGCAACCGAGTCGTTTGGCTGGGATAAC | + |
Preference number: 6 (lower is better) Translates to: WVRAPGRSGQYR*WEATESFGWDN Trigger: GTTATCCCAGCCAAACGACTCGGTTGCCTCCCATCACCTATACTGGCCGCTTCTCCCTGGAGCCCGCACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | CTGACTAGGCTGAAAAGGGGTTCAGGCCACAAAGTGTaGCCACTGTTGGGTGCGGGCTCCAGGGAGAAGCGG | + |
Preference number: 6 (lower is better) Translates to: LTRLKRGSGHKV*PLLGAGSREKR Trigger: CCGCTTCTCCCTGGAGCCCGCACCCAACAGTGGCAACACTTTGTGGCCTGAACCCCTTTTCAGCCTAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | CGGGTACTGCAAGGCTGTGCCTGCCGAGCCAGGAAAGGCCTGGCTTaGGGGCTCAGGAAAAATGTCAGTGTTGGGAGTAGGAAAGGTGGG | + |
Preference number: 6 (lower is better) Translates to: RVLQGCACRARKGLA*GLRKNVSVGSRKGG Trigger: CCCACCTTTCCTACTCCCAACACTGACATTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTGCAGTACCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | CAGAGCGATGTCAGAAAAGGACTCTGTGGTCAGGTGCTCATAGGGTaGTTCGCTCGGCTCCCCTTGAGGATTGAAGGCGCTGCTGCCGCT | + |
Preference number: 6 (lower is better) Translates to: QSDVRKGLCGQVLIG*FARLPLRIEGAAAA Trigger: AGCGGCAGCAGCGCCTTCAATCCTCAAGGGGAGCCGAGCGAACAACCCTATGAGCACCTGACCACAGAGTCCTTTTCTGACATCGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GATAGTCAGGGATCATGGGAACCTGGAAACCACCTTTaGTGGCAGGGTAGGCAGGAGGCGGGTACTGCAAGG | + |
Preference number: 6 (lower is better) Translates to: DSQGSWEPGNHL*WQGRQEAGTAR Trigger: CCTTGCAGTACCCGCCTCCTGCCTACCCTGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | GCGGCCAGTATAGGTGATGGGAGGCAACCGAGTCGTTaGGCTGGGATAACTCGTCTCCACCATCGCCTTCTC | + |
Preference number: 6 (lower is better) Translates to: AASIGDGRQPSR*AGITRLHHRLL Trigger: GAGAAGGCGATGGTGGAGACGAGTTATCCCAGCCAAACGACTCGGTTGCCTCCCATCACCTATACTGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | GCTGGAGAAGGCGCCGAGGATGAAGAGGTCGGAGGATaGGTCATGCTCACGAGGCCACTGACTAGGCTGAAA | + |
Preference number: 6 (lower is better) Translates to: AGEGAEDEEVGG*VMLTRPLTRLK Trigger: TTTCAGCCTAGTCAGTGGCCTCGTGAGCATGACCAATCCTCCGACCTCTTCATCCTCGGCGCCTTCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | CAAGGCTGTGCCTGCCGAGCCAGGAAAGGCCTGGCTTaGGGGCTCAGGAAAAATGTCAGTGTTGGGAGTAGG | + |
Preference number: 6 (lower is better) Translates to: QGCACRARKGLA*GLRKNVSVGSR Trigger: CCTACTCCCAACACTGACATTTTTCCTGAGCCCCAAAGCCAGGCCTTTCCTGGCTCGGCAGGCACAGCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | GATGAAGCAGCTGGAGAAGGCGCCGAGGATGAAGAGGTCGGAGGATaGGTCATGCTCACGAGGCCACTGACTAGGCTGAAAAGGGGTTCA | + |
Preference number: 6 (lower is better) Translates to: DEAAGEGAEDEEVGG*VMLTRPLTRLKRGS Trigger: TGAACCCCTTTTCAGCCTAGTCAGTGGCCTCGTGAGCATGACCAATCCTCCGACCTCTTCATCCTCGGCGCCTTCTCCAGCTGCTTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | GAAGGGCTTCTGGTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTTGTaGTGGAAACAGATAGTCAGGGATCATGGGAACCTGGAAACCACC | + |
Preference number: 6 (lower is better) Translates to: EGLLVWGAQAQVSLL*WKQIVRDHGNLETT Trigger: GGTGGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | CTGGAAGGGCTTCTGGTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTaGTTGTGGAAACAGATAGTCAGGGATCATGGGAACCTGGAAACC | + |
Preference number: 6 (lower is better) Translates to: LEGLLVWGAQAQVSL*LWKQIVRDHGNLET Trigger: GGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAGAAGCCCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GCAGCATCATCTCCTCCAGTTTGGGGTAGTTGTCCATaGTGGGTGAGTGAGGAAAGGAGCCGAACGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: AASSPPVWGSCP*WVSEERSRTGQ Trigger: CTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GAGCCCCGTTGCTCAGCAGCATCATCTCCTCCAGTTTaGGGTAGTTGTCCATGGTGGGTGAGTGAGGAAAGG | + |
Preference number: 6 (lower is better) Translates to: EPRCSAASSPPV*GSCPWWVSEER Trigger: CCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGCTGCTGAGCAACGGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | CTGGTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTTGTaGTGGAAACAGATAGTCAGGGATCATGGGAACCTG | + |
Preference number: 6 (lower is better) Translates to: LVWGAQAQVSLL*WKQIVRDHGNL Trigger: CAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS TCA 72 bp | CATCTCCTCCAGTTTGGGGTAGTTGTCCATGGTGGGTaGGTGAGGAAAGGAGCCGAACGGGTCAGAGATCTG | + |
Preference number: 6 (lower is better) Translates to: HLLQFGVVVHGG*VRKGAERVRDL Trigger: CAGATCTCTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GCATCATCTCCTCCAGTTTGGGGTAGTTGTCCATGGTaGGTGAGTGAGGAAAGGAGCCGAACGGGTCAGAGA | + |
Preference number: 6 (lower is better) Translates to: ASSPPVWGSCPW*VSEERSRTGQR Trigger: TCTCTGACCCGTTCGGCTCCTTTCCTCACTCACCCACCATGGACAACTACCCCAAACTGGAGGAGATGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTTGTTGTaGAAACAGATAGTCAGGGATCATGGGAACCTGGAA | + |
Preference number: 6 (lower is better) Translates to: VWGAQAQVSLLL*KQIVRDHGNLE Trigger: TTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | GCTTTAATAGTGGATAGTGGAGTGAGCGAAGGCTGCTaGGTACGGTTCTCCAGACCCTGGAAGGGCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: ALIVDSGVSEGC*VRFSRPWKGFW Trigger: CCAGAAGCCCTTCCAGGGTCTGGAGAACCGTACCCAGCAGCCTTCGCTCACTCCACTATCCACTATTAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | GTCAGAAAAGGACTCTGTGGTCAGGTGCTCATAGGGTaGTTCGCTCGGCTCCCCTTGAGGATTGAAGGCGCT | + |
Preference number: 6 (lower is better) Translates to: VRKGLCGQVLIG*FARLPLRIEGA Trigger: AGCGCCTTCAATCCTCAAGGGGAGCCGAGCGAACAACCCTATGAGCACCTGACCACAGAGTCCTTTTCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | CTTCTGGTCTGGGGTGCCCAGGCTCAGGTCTCCCTGTaGTTGTGGAAACAGATAGTCAGGGATCATGGGAAC | + |
Preference number: 6 (lower is better) Translates to: LLVWGAQAQVSL*LWKQIVRDHGN Trigger: GTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAGACCTGAGCCTGGGCACCCCAGACCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | CAGGGAGAAGCGGCCAGTATAGGTGATGGGAGGCAACCGAGTCGTTaGGCTGGGATAACTCGTCTCCACCATCGCCTTCTCATTATTCAG | + |
Preference number: 6 (lower is better) Translates to: QGEAASIGDGRQPSR*AGITRLHHRLLIIQ Trigger: CTGAATAATGAGAAGGCGATGGTGGAGACGAGTTATCCCAGCCAAACGACTCGGTTGCCTCCCATCACCTATACTGGCCGCTTCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 72 bp | AAGGCTTTAATAGTGGATAGTGGAGTGAGCGAAGGCTaGTGGGTACGGTTCTCCAGACCCTGGAAGGGCTTC | + |
Preference number: 6 (lower is better) Translates to: KALIVDSGVSEG*WVRFSRPWKGF Trigger: GAAGCCCTTCCAGGGTCTGGAGAACCGTACCCAGCAGCCTTCGCTCACTCCACTATCCACTATTAAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | CTCCCTGTTGTTGTGGAAACAGATAGTCAGGGATCATaGGAACCTGGAAACCACCTTTGGTGGCAGGGTAGG | + |
Preference number: 6 (lower is better) Translates to: LPVVVETDSQGS*EPGNHLWWQGR Trigger: CCTACCCTGCCACCAAAGGTGGTTTCCAGGTTCCCATGATCCCTGACTATCTGTTTCCACAACAACAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS TCA 72 bp | GTGGTATTAAGAGCCTTTAAGTCCTGGGAGCCCGACTaGGTGGCGAAGGCTTTAATAGTGGATAGTGGAGTG | + |
Preference number: 6 (lower is better) Translates to: VVLRAFKSWEPD*VAKALIVDSGV Trigger: CACTCCACTATCCACTATTAAAGCCTTCGCCACTCAGTCGGGCTCCCAGGACTTAAAGGCTCTTAATACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CCA 72 bp | AATGGATTTTGGTATGCCTCTTGCGTTCATCACTCCTaGCAAACTTCCTCCCACAAATGTCACAGGCAAAAG | + |
Preference number: 6 (lower is better) Translates to: NGFWYASCVHHS*QTSSHKCHRQK Trigger: CTTTTGCCTGTGACATTTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | TCTGCTTTCTTGTCCTTCTGTCTTAAATGGATTTTGGTATGCCTCTaGCGTTCATCACTCCTGGCAAACTTCCTCCCACAAATGTCACAG | + |
Preference number: 6 (lower is better) Translates to: SAFLSFCLKWILVCL*RSSLLANFLPQMSQ Trigger: CTGTGACATTTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 90 bp | ACCACACTTTTGTCTGCTTTCTTGTCCTTCTGTCTTAAATGGATTTaGGTATGCCTCTTGCGTTCATCACTCCTGGCAAACTTCCTCCCA | + |
Preference number: 6 (lower is better) Translates to: TTLLSAFLSFCLKWI*VCLLRSSLLANFLP Trigger: TGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGCAGACAAAAGTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 72 bp | TGTCCTTCTGTCTTAAATGGATTTTGGTATGCCTCTTaGGTTCATCACTCCTGGCAAACTTCCTCCCACAAA | + |
Preference number: 6 (lower is better) Translates to: CPSVLNGFWYAS*VHHSWQTSSHK Trigger: TTTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS GCA 72 bp | GCTTTCTTGTCCTTCTGTCTTAAATGGATTTTGGTATaGCTCTTGCGTTCATCACTCCTGGCAAACTTCCTC | + |
Preference number: 6 (lower is better) Translates to: AFLSFCLKWILV*LLRSSLLANFL Trigger: GAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAAGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |
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CDS CAA 72 bp | TTGTCCTTCTGTCTTAAATGGATTTTGGTATGCCTCTaGCGTTCATCACTCCTGGCAAACTTCCTCCCACAA | + |
Preference number: 6 (lower is better) Translates to: LSFCLKWILVCL*RSSLLANFLPQ Trigger: TTGTGGGAGGAAGTTTGCCAGGAGTGATGAACGCAAGAGGCATACCAAAATCCATTTAAGACAGAAGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064795.6 ENSMUST00000165033.2 |