Pregenerated sensors for EGLN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035105Ensembl transcript IDs: ENSMUST00000039516.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAGGTGTTTCGTACAGAGTTCGGGAGGAAGCGACACCTGCCCCCTaGAGCAGGAGACCCTCCCACGGTTCTGGGAAATCCCACAACTCT | + |
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Preference number: 1 (lower is better) Translates to: IGVSYRVREEATPAP*SRRPSHGSGKSHNS Trigger: AGAGTTGTGGGATTTCCCAGAACCGTGGGAGGGTCTCCTGCTGCAGGGGGCAGGTGTCGCTTCCTCCCGAACTCTGTACGAAACACCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 90 bp | CTGCAGCAGGAGACCCTCCCACGGTTCTGGGAAATCCCACAACTCTaGCCGTCCTACCAGCCAGTTGCAGTCAAGGATCAAGACGACTCA | + |
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Preference number: 1 (lower is better) Translates to: LQQETLPRFWEIPQL*PSYQPVAVKDQDDS Trigger: TGAGTCGTCTTGATCCTTGACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCGTGGGAGGGTCTCCTGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 90 bp | GTCCTGGGCTCAACAGCCGAATTCCCAAATCTATCTTTAAACCGCTaGCCAGCTAGGATGTCGTCTGCAGGTATTTCTGGAGTTAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: VLGSTAEFPNLSLNR*PARMSSAGISGVSK Trigger: TTTGCTAACTCCAGAAATACCTGCAGACGACATCCTAGCTGGCCAGCGGTTTAAAGATAGATTTGGGAATTCGGCTGTTGAGCCCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR GCA 90 bp | TTGGAGGGTACCCCTTCGTGGCATCTGTCACCAACTTTATTTCTTTaGGAACCTCCTCCCTTCAAATCAGGACGCATACATAAAGTGCGA | + |
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Preference number: 1 (lower is better) Translates to: LEGTPSWHLSPTLFL*EPPPFKSGRIHKVR Trigger: TCGCACTTTATGTATGCGTCCTGATTTGAAGGGAGGAGGTTCGCAAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 90 bp | GATATTTCTCTTTCTTGCTGTGAGGGTTTGGAGGGTACCCCTTCGTaGCATCTGTCACCAACTTTATTTCTTTGCGAACCTCCTCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: DISLSCCEGLEGTPS*HLSPTLFLCEPPPF Trigger: GAAGGGAGGAGGTTCGCAAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 90 bp | CATCTGGAAATCGTTCAGATATTTCTCTTTCTTGCTGTGAGGGTTTaGAGGGTACCCCTTCGTGGCATCTGTCACCAACTTTATTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HLEIVQIFLFLAVRV*RVPLRGICHQLYFF Trigger: AAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGATTTCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 90 bp | CACGGTTCTGGGAAATCCCACAACTCTGGCCGTCCTACCAGCCAGTaGCAGTCAAGGATCAAGACGACTCAAGTGAGGCTGGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HGSGKSHNSGRPTSQ*QSRIKTTQVRLAEQ Trigger: CTGCTCTGCCAGCCTCACTTGAGTCGTCTTGATCCTTGACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR TCA 90 bp | CGGTTCTGGGAAATCCCACAACTCTGGCCGTCCTACCAGCCAGTTGCAGTCAAGTTCTCTTTCTTGCTGTaGGGGTTTGGAGGGTACCCC | + |
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Preference number: 2 (lower is better) Translates to: RFWEIPQLWPSYQPVAVKFSFLL*GFGGYP Trigger: GGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAA...CTTGACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAGTGAGGCTGGCAGAGCAGATGATGTGGAAGAACTCCAATAGCTCTGAGGGCAAAGAGAGTGTCTaGAGGTCACCGCAGTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TQVRLAEQMMWKNSNSSEGKESV*RSPQSR Trigger: CCGGGACTGCGGTGACCTTCAGACACTCTCTTTGCC...CTCAGAGCTATTGGAGTTCTTCCACATCATCTGCTCTGCCAGCCTCACTTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTCGTACAGAGTTCGGGAGGAAGCGACACCTGCCCCCTGCAGCAGGAGACAGCAGAATCCAGTGCTaGATTACCAGGAAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VFRTEFGRKRHLPPAAGDSRIQC*ITRKLS Trigger: AGAAAGCTTCCTGGTAATTCAGCACTGGATTCTGCT...GTCTCCTGCTGCAGGGGGCAGGTGTCGCTTCCTCCCGAACTCTGTACGAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 90 bp | GAACTGAACTGCTCGGGATGGGGATGCTCGGACGAATCATGTAAGTaGGGCTTTGCTCTTCCCATAGAGTTAGCAGAATCCAGTGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: ELNCSGWGCSDESCK*GFALPIELAESSAE Trigger: TTCAGCACTGGATTCTGCTAACTCTATGGGAAGAGCAAAGCCCAACTTACATGATTCGTCCGAGCATCCCCATCCCGAGCAGTTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTCGTACAGAGTTCGGGAGGAAGCGACACCTGCCCCCTGCAGCAGGAGACATAGTGCATAATAAATaGTGGGATCATCTTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: VFRTEFGRKRHLPPAAGDIVHNK*WDHLPQ Trigger: TTGTGGAAGATGATCCCAGCATTTATTATGCACTAT...GTCTCCTGCTGCAGGGGGCAGGTGTCGCTTCCTCCCGAACTCTGTACGAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | TGCATAATAAATGCTGGGATCATCTTCCACAAGAGAGCCATTGACTTAGCAATGGTACCACAAACAAGGTaGGGAGCTGAACGACGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CIINAGIIFHKRAIDLAMVPQTR*GAERRG Trigger: CCCACGTCGTTCAGCTCCCCACCTTGTTTGTGGTAC...CATTGCTAAGTCAATGGCTCTCTTGTGGAAGATGATCCCAGCATTTATTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR TCA 90 bp | GACGAATCATGTAAGTTGGGCTTTGCTCTTCCCATAGAGTTAGCAGAATCCAGTCCCGGCAAGAAAACATaGAGTACCACAAACAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DESCKLGFALPIELAESSPGKKT*STTNKV Trigger: CACCTTGTTTGTGGTACTTCATGTTTTCTTGCCGGG...ACTGGATTCTGCTAACTCTATGGGAAGAGCAAAGCCCAACTTACATGATTCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAAGGATCAAGACGACTCAAGTGAGGCTGGCAGAGCAGATGATGTGGAAGCTGGTTAACAACATCTaGAAATCGTTCAGATATTTC | + |
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Preference number: 2 (lower is better) Translates to: QSRIKTTQVRLAEQMMWKLVNNI*KSFRYF Trigger: GAAATATCTGAACGATTTCCAGATGTTGTTAACCAG...CTTCCACATCATCTGCTCTGCCAGCCTCACTTGAGTCGTCTTGATCCTTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 90 bp | ACATCTGGAAATCGTTCAGATATTTCTCTTTCTTGCTGTGAGGGTTaGGAGGGTACCCCTTCGTGGCATCTGTCACCAACTTTATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TSGNRSDISLSCCEG*EGTPSWHLSPTLFL Trigger: AAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGATTTCCAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGGAATATTGCATGGGTCAAAAATGTACAAAATCCCTGTCTTCGTTGTACGCAGAGGGGATTGTATaGATTCTTTGGATCTTGACA | + |
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Preference number: 2 (lower is better) Translates to: RWEYCMGQKCTKSLSSLYAEGIV*ILWILT Trigger: TGTCAAGATCCAAAGAATCCATACAATCCCCTCTGC...GTACAACGAAGACAGGGATTTTGTACATTTTTGACCCATGCAATATTCCCAGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCCAGGCAAATAAGAAGCAGTCCTaGGCTCAACAGCCGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: TEFIEHVFTKPFLAICQANKKQS*AQQPNS Trigger: GGAATTCGGCTGTTGAGCCCAGGACTGCTTCTTATT...TGCCTGGCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCCCGTAAACCAGGAAAATaGAGCATCCACCGTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: RRLSLLSMYLLSPFLLYARKPGK*SIHRGI Trigger: TATCCCACGGTGGATGCTCCATTTTCCTGGTTTACG...GGCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CCA 90 bp | CAATACCAGAAAAACAACCCAAACTACCTGGCGAATTTTATTCTCTGGATAATTGTGCATAATAAATGCTaGGATCATCTTCCACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: QYQKNNPNYLANFILWIIVHNKC*DHLPQE Trigger: CTCTTGTGGAAGATGATCCCAGCATTTATTATGCAC...AATTATCCAGAGAATAAAATTCGCCAGGTAGTTTGGGTTGTTTTTCTGGTATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 90 bp | TGGACACTTTCCAAAACAATTAGAGGAAAAGTATCAACTTCTGTCTaGGAAAGTCTGTCTGTCTATCTGTCTGAACATGACGAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: WTLSKTIRGKVSTSV*ESLSVYLSEHDEIK Trigger: TTTTATTTCGTCATGTTCAGACAGATAGACAGACAGACTTTCCAAGACAGAAGTTGATACTTTTCCTCTAATTGTTTTGGAAAGTGTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | ACCTGCCCCCTGCAGCAGGAGACCCTCCCACGGTTCTaGGAAATCCCACAACTCTGGCCGTCCTACCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TCPLQQETLPRF*EIPQLWPSYQP Trigger: TGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCGTGGGAGGGTCTCCTGCTGCAGGGGGCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR GCA 72 bp | TCGTACAGAGTTCGGGAGGAAGCGACACCTGCCCCCTaGAGCAGGAGACCCTCCCACGGTTCTGGGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: SYRVREEATPAP*SRRPSHGSGKS Trigger: GGATTTCCCAGAACCGTGGGAGGGTCTCCTGCTGCAGGGGGCAGGTGTCGCTTCCTCCCGAACTCTGTACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | GAGACCCTCCCACGGTTCTGGGAAATCCCACAACTCTaGCCGTCCTACCAGCCAGTTGCAGTCAAGGATCAA | + |
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Preference number: 3 (lower is better) Translates to: ETLPRFWEIPQL*PSYQPVAVKDQ Trigger: TTGATCCTTGACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCGTGGGAGGGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CAA 90 bp | CCCACGGTTCTGGGAAATCCCACAACTCTGGCCGTCCTACCAGCCAGTTGCAGTGACGAATCATGTAAGTaGGGCTTTGCTCTTCCCATA | + |
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Preference number: 3 (lower is better) Translates to: PTVLGNPTTLAVLPASCSDESCK*GFALPI Trigger: TATGGGAAGAGCAAAGCCCAACTTACATGATTCGTC...ACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCCAGAACCGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | GTCCCGGCAAGAAAACATGAAGTACCACAAACAAGGTaGGGAGCTGAACGACGTGGGCAGAGGGGATTGTAT | + |
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Preference number: 3 (lower is better) Translates to: VPARKHEVPQTR*GAERRGQRGLY Trigger: ATACAATCCCCTCTGCCCACGTCGTTCAGCTCCCCACCTTGTTTGTGGTACTTCATGTTTTCTTGCCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR TCA 72 bp | ATCTGGAAATCGTTCAGATATTTCTCTTTCTTGCTGTaGGGGTTTGGAGGGTACCCCTTCGTGGCATCTGTC | + |
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Preference number: 3 (lower is better) Translates to: IWKSFRYFSFLL*GFGGYPFVASV Trigger: GACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGATTTCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR GCA 72 bp | ACCCCTTCGTGGCATCTGTCACCAACTTTATTTCTTTaGGAACCTCCTCCCTTCAAATCAGGACGCATACAT | + |
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Preference number: 3 (lower is better) Translates to: TPSWHLSPTLFL*EPPPFKSGRIH Trigger: ATGTATGCGTCCTGATTTGAAGGGAGGAGGTTCGCAAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | ATCGTTCAGATATTTCTCTTTCTTGCTGTGAGGGTTTaGAGGGTACCCCTTCGTGGCATCTGTCACCAACTT | + |
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Preference number: 3 (lower is better) Translates to: IVQIFLFLAVRV*RVPLRGICHQL Trigger: AAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CAA 90 bp | GAATCCAGTGCTGAATTACCAGGAAGCTTTCTATCCTCTGATTTAACTTCAAATTCTTGCTGTGAGGGTTaGGAGGGTACCCCTTCGTGG | + |
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Preference number: 3 (lower is better) Translates to: ESSAELPGSFLSSDLTSNSCCEG*EGTPSW Trigger: CCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGA...ATTTGAAGTTAAATCAGAGGATAGAAAGCTTCCTGGTAATTCAGCACTGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR GCA 72 bp | ACAACATCTGGAAATCGTTCAGATATTTCTCTTTCTTaGTGTGAGGGTTTGGAGGGTACCCCTTCGTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TTSGNRSDISLS*CEGLEGTPSWH Trigger: ATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGATTTCCAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | ATGCCAGGCATTAGGTTAGGCGCTGGGAATATTGCATaGGTCAAAAATGTACAAAATCCCTGTCTTCGTTGT | + |
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Preference number: 3 (lower is better) Translates to: MPGIRLGAGNIA*VKNVQNPCLRC Trigger: ACAACGAAGACAGGGATTTTGTACATTTTTGACCCATGCAATATTCCCAGCGCCTAACCTAATGCCTGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR TCA 72 bp | AATAAATGCTGGGATCATCTTCCACAAGAGAGCCATTaGCTTAGCAATGACCTTCAGAAAGTACGGGTCGTA | + |
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Preference number: 3 (lower is better) Translates to: NKCWDHLPQESH*LSNDLQKVRVV Trigger: TACGACCCGTACTTTCTGAAGGTCATTGCTAAGTCAATGGCTCTCTTGTGGAAGATGATCCCAGCATTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR-3UTR CAA 90 bp | AGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCCAATAAGGACATGACATaGCAAGTTAGAAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: RRLSLLSMYLLSPFLLYANKDMT*QVRRWE Trigger: TTCCCACCTTCTAACTTGCAATGTCATGTCCTTATT...GGCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CCA 72 bp | CCAAAACAATTAGAGGAAAAGTATCAACTTCTGTCTTaGAAAGTCTGTCTGTCTATCTGTCTGAACATGACG | + |
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Preference number: 3 (lower is better) Translates to: PKQLEEKYQLLS*KVCLSICLNMT Trigger: CGTCATGTTCAGACAGATAGACAGACAGACTTTCCAAGACAGAAGTTGATACTTTTCCTCTAATTGTTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR TCA 90 bp | CCCTGCAGCAGGAGACCCTCCCACGGTTCTGGGAAATCCCACAACTCTGGCCGTGGTAGTAGATACAGGTaGTACAGCGGCCATCACCAT | + |
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Preference number: 4 (lower is better) Translates to: PCSRRPSHGSGKSHNSGRGSRYR*YSGHHH Trigger: ATGGTGATGGCCGCTGTATCACCTGTATCTACTACC...ACGGCCAGAGTTGTGGGATTTCCCAGAACCGTGGGAGGGTCTCCTGCTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTGAGGCTGGCAGAGCAGATGATGTGGAAGAACTCCAATAGCTCTGAGTGCCCCCGATCCACGTaGTCTGGTCGCCTCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TQVRLAEQMMWKNSNSSECPRST*SGRLAG Trigger: ACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCA...CTCAGAGCTATTGGAGTTCTTCCACATCATCTGCTCTGCCAGCCTCACTTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR GCA 90 bp | CTTTCTTGCTGTGAGGGTTTGGAGGGTACCCCTTCGTGGCATCTGTCACCAACTCAGAAGCCGACCTCGTaGAGACAGGGCACGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: LSCCEGLEGTPSWHLSPTQKPTS*RQGTMY Trigger: GTACATCGTGCCCTGTCTGCACGAGGTCGGCTTCTG...AGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CCA 90 bp | CGCTGGGAATATTGCATGGGTCAAAAATGTACAAAATCCCTGTCTTCGTTGTACCTCGCAGGTGCCGCTTaGAGACGCCGGCGCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: RWEYCMGQKCTKSLSSLYLAGAA*RRRRTA Trigger: GGCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAG...GTACAACGAAGACAGGGATTTTGTACATTTTTGACCCATGCAATATTCCCAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 72 bp | GGGAAATCCCACAACTCTGGCCGTCCTACCAGCCAGTaGCAGTCAAGGATCAAGACGACTCAAGTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GKSHNSGRPTSQ*QSRIKTTQVRL Trigger: CAGCCTCACTTGAGTCGTCTTGATCCTTGACTGCAACTGGCTGGTAGGACGGCCAGAGTTGTGGGATTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CCA 90 bp | CCAAATCTATCTTTAAACCGCTGGCCAGCTAGGATGTCGTCTGCAGGTATTTCTCCGATCCACGTGATCTaGTCGCCTCGCAGGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PNLSLNRWPARMSSAGISPIHVI*SPRRCR Trigger: GCGGCACCTGCGAGGCGACCAGATCACGTGGATCGG...AGAAATACCTGCAGACGACATCCTAGCTGGCCAGCGGTTTAAAGATAGATTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR TCA 90 bp | CCCCTTCGTGGCATCTGTCACCAACTTTATTTCTTTGCGAACCTCCTCCCTTCATGTAGTGCAGCTGCTTaGCTCGCTCCAGCACGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PLRGICHQLYFFANLLPSCSAAA*LAPARS Trigger: ACTGCGTGCTGGAGCGAGTCAAGCAGCTGCACTACA...TGAAGGGAGGAGGTTCGCAAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR GCA 90 bp | GAGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCTGGTCGCCTCGCAGGTaGCGCTTGGAGACGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: EETEFIEHVFTKPFLAICWSPRR*RLETPA Trigger: CGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCA...GCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR GCA 90 bp | AGGGTTTGGAGGGTACCCCTTCGTGGCATCTGTCACCAACTTTATTTCTTTGCGATAGCAAGCCACCATTaGCTTGGACCGCTCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: RVWRVPLRGICHQLYFFAIASHH*LGPLLD Trigger: GTCAAGGAGCGGTCCAAGGCAATGGTGGCTTGCTAT...CGCAAAGAAATAAAGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 72 bp | TGCTCGGGATGGGGATGCTCGGACGAATCATGTAAGTaGGGCTTTGCTCTTCCCATAGAGTTAGCAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: CSGWGCSDESCK*GFALPIELAES Trigger: GGATTCTGCTAACTCTATGGGAAGAGCAAAGCCCAACTTACATGATTCGTCCGAGCATCCCCATCCCGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CCA 90 bp | CAGTCAAGGATCAAGACGACTCAAGTGAGGCTGGCAGAGCAGATGATGTGGAAGGAAGTCTGTCAAAAATaGGCTCCACGTCTGCTACAA | + |
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Preference number: 4 (lower is better) Translates to: QSRIKTTQVRLAEQMMWKEVCQK*APRLLQ Trigger: TTGTAGCAGACGTGGAGCCCATTTTTGACAGACTTC...CTTCCACATCATCTGCTCTGCCAGCCTCACTTGAGTCGTCTTGATCCTTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR TCA 90 bp | GTGCGAATAAGAAGCAGTCCTGGGCTCAACAGCCGAATTCCCAAATCTATCTTTTGGATTCCTGCGGTCTaGCCAGAAGAACAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VRIRSSPGLNSRIPKSIFWIPAV*PEEQKS Trigger: AGACTTCTGTTCTTCTGGTCAGACCGCAGGAATCCA...AAAGATAGATTTGGGAATTCGGCTGTTGAGCCCAGGACTGCTTCTTATTCGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR GCA 90 bp | GTGCGAATAAGAAGCAGTCCTGGGCTCAACAGCCGAATTCCCAAATCTATCTTTAATGGGCTCCACGTCTaGTACAAACGATTTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: VRIRSSPGLNSRIPKSIFNGLHV*YKRFPF Trigger: GAAGGGAAATCGTTTGTAGCAGACGTGGAGCCCATT...AAAGATAGATTTGGGAATTCGGCTGTTGAGCCCAGGACTGCTTCTTATTCGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| 3UTR CAA 72 bp | AATCGTTCAGATATTTCTCTTTCTTGCTGTGAGGGTTaGGAGGGTACCCCTTCGTGGCATCTGTCACCAACT | + |
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Preference number: 4 (lower is better) Translates to: NRSDISLSCCEG*EGTPSWHLSPT Trigger: AGTTGGTGACAGATGCCACGAAGGGGTACCCTCCAAACCCTCACAGCAAGAAAGAGAAATATCTGAACGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR TCA 90 bp | GAGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCCCTTGGACCGCTCCTTaGCATAGTATTTGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EETEFIEHVFTKPFLAICPWTAP*HSICPA Trigger: GGCTGGGCAAATACTATGTCAAGGAGCGGTCCAAGG...GCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCAGCGGCCATCACCATTaGGGTTGTCCACATGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: EETEFIEHVFTKPFLAICSGHHH*GCPHGE Trigger: TTCGCCATGTGGACAACCCCAATGGTGATGGCCGCT...GCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS GCA 90 bp | CCCTCCTCGTTGCCCCCGATCCACGTGATCTGGTCGCCTCGCAGGTaGCGCTTGGAGACGCCGGCGCACGGCCCGGCCAGCTGGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: PSSLPPIHVIWSPRR*RLETPAHGPASWPS Trigger: TGACGGCCAGCTGGCCGGGCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS CCA 90 bp | TTGATGGCCTCGCAGCCCTCCTCGTTGCCCCCGATCCACGTGATCTaGTCGCCTCGCAGGTGCCGCTTGGAGACGCCGGCGCACGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: LMASQPSSLPPIHVI*SPRRCRLETPAHGP Trigger: CGGGCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGAGGCCATCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CAA 90 bp | ACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCCAGGCACCTCGCAGGTGCCGCTaGGAGACGCCGGCGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: TEFIEHVFTKPFLAICQAPRRCR*ETPAHG Trigger: GCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAGG...TGCCTGGCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGACTGAGTTTATTGAGCATGTATTTACTAAGCCCTTTCTTGCTATATGCTCGCAGCCCTCCTCGTaGCCCCCGATCCACGTGATC | + |
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Preference number: 5 (lower is better) Translates to: EETEFIEHVFTKPFLAICSQPSS*PPIHVI Trigger: GATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGA...GCATATAGCAAGAAAGGGCTTAGTAAATACATGCTCAATAAACTCAGTCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS CCA 90 bp | GTGGATTCCTGCGGTCTGACCAGAAGAACAGAAGTCTGTCAAAAATaGGCTCCACGTCTGCTACAAACGATTTCCCTTCCGGAAATATCC | + |
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Preference number: 5 (lower is better) Translates to: VDSCGLTRRTEVCQK*APRLLQTISLPEIS Trigger: GGATATTTCCGGAAGGGAAATCGTTTGTAGCAGACGTGGAGCCCATTTTTGACAGACTTCTGTTCTTCTGGTCAGACCGCAGGAATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS-3UTR CAA 90 bp | GAATCCAGTGCTGAATTACCAGGAAGCTTTCTATCCTCTGATTTAACTTCAAATCAGCGGCCATCACCATaGGGGTTGTCCACATGGCGA | + |
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Preference number: 5 (lower is better) Translates to: ESSAELPGSFLSSDLTSNQRPSP*GLSTWR Trigger: TCGCCATGTGGACAACCCCAATGGTGATGGCCGCTG...ATTTGAAGTTAAATCAGAGGATAGAAAGCTTCCTGGTAATTCAGCACTGGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS CAA 72 bp | CCGATCCACGTGATCTGGTCGCCTCGCAGGTGCCGCTaGGAGACGCCGGCGCACGGCCCGGCCAGCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PIHVIWSPRRCR*ETPAHGPASWP Trigger: CGGCCAGCTGGCCGGGCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS GCA 72 bp | TTGCCCCCGATCCACGTGATCTGGTCGCCTCGCAGGTaGCGCTTGGAGACGCCGGCGCACGGCCCGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPPIHVIWSPRR*RLETPAHGPAS Trigger: GCTGGCCGGGCCGTGCGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS CCA 72 bp | TCGCAGCCCTCCTCGTTGCCCCCGATCCACGTGATCTaGTCGCCTCGCAGGTGCCGCTTGGAGACGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SQPSSLPPIHVI*SPRRCRLETPA Trigger: CGCCGGCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS TCA 72 bp | TGGCCTCGCAGCCCTCCTCGTTGCCCCCGATCCACGTaGTCTGGTCGCCTCGCAGGTGCCGCTTGGAGACGC | + |
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Preference number: 6 (lower is better) Translates to: WPRSPPRCPRST*SGRLAGAAWRR Trigger: GCGTCTCCAAGCGGCACCTGCGAGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGAGGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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| CDS CCA 72 bp | TGCGGTCTGACCAGAAGAACAGAAGTCTGTCAAAAATaGGCTCCACGTCTGCTACAAACGATTTCCCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: CGLTRRTEVCQK*APRLLQTISLP Trigger: CGGAAGGGAAATCGTTTGTAGCAGACGTGGAGCCCATTTTTGACAGACTTCTGTTCTTCTGGTCAGACCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039516.4 |
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