Pregenerated sensors for EGLN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031987Ensembl transcript IDs: ENSMUST00000034469.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGTCACAGATCTGGAGCTGACCCCACAGTACAGTCCCAGCAGATaGAGCCCTCTGTTGGATGACACCCGGCGAAGTCGCCTGGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: AVTDLELTPQYSPSR*SPLLDDTRRSRLAP Trigger: GGGAGCCAGGCGACTTCGCCGGGTGTCATCCAACAGAGGGCTCCATCTGCTGGGACTGTACTGTGGGGTCAGCTCCAGATCTGTGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 90 bp | GCCAGGTGGGCAAACCTTGAGCTGGCCAGCGGCAGAGGCACTTGCTaGAGAGGTGTGGTCAGCGGATATGGGTCAGAAGGAGACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ARWANLELASGRGTC*RGVVSGYGSEGDFL Trigger: CAGGAAGTCTCCTTCTGACCCATATCCGCTGACCACACCTCTCCAGCAAGTGCCTCTGCCGCTGGCCAGCTCAAGGTTTGCCCACCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 90 bp | AGGTGTCTCTCTGTCCATCCTGTCCACGAGTCCACAGAAGGCAACTaGGAGGCTGTAGGTGACGTGGGTACTGCCGGACCCAAGGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: RCLSVHPVHESTEGN*EAVGDVGTAGPKAP Trigger: TGGGGCCTTGGGTCCGGCAGTACCCACGTCACCTACAGCCTCTCAGTTGCCTTCTGTGGACTCGTGGACAGGATGGACAGAGAGACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 90 bp | AGCCCTCTGTTGGATGACACCCGGCGAAGTCGCCTGGCTCCCAGCTaGAATACCAGGCAGGTGTCTCTCTGTCCATCCTGTCCACGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPLLDDTRRSRLAPS*NTRQVSLCPSCPRV Trigger: GACTCGTGGACAGGATGGACAGAGAGACACCTGCCTGGTATTTCAGCTGGGAGCCAGGCGACTTCGCCGGGTGTCATCCAACAGAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 90 bp | CACGTGCCTGGGTCCACCAGGTGCCCTGCCACAAGAACACAGCCCTaGCCTGGAAGGGTCTGGAAGCACAGTCAAAACTACGGAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: HVPGSTRCPATRTQP*PGRVWKHSQNYGEA Trigger: GGCTTCTCCGTAGTTTTGACTGTGCTTCCAGACCCTTCCAGGTCAGGGCTGTGTTCTTGTGGCAGGGCACCTGGTGGACCCAGGCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 90 bp | GCCTGGGTCCACCAGGTGCCCTGCCACAAGAACACAGCCCTGACCTaGAAGGGTCTGGAAGCACAGTCAAAACTACGGAGAAGCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: AWVHQVPCHKNTALT*KGLEAQSKLRRSHK Trigger: CTTGTGGCTTCTCCGTAGTTTTGACTGTGCTTCCAGACCCTTCCAGGTCAGGGCTGTGTTCTTGTGGCAGGGCACCTGGTGGACCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 90 bp | GTCTCCTCTTGGGTCAGCAGCCAAGAGCAGTCACAGATCTGGAGCTaGCCCCACAGTACAGTCCCAGCAGATGGAGCCCTCTGTTGGATG | + |
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Preference number: 1 (lower is better) Translates to: VSSWVSSQEQSQIWS*PHSTVPADGALCWM Trigger: CATCCAACAGAGGGCTCCATCTGCTGGGACTGTACTGTGGGGTCAGCTCCAGATCTGTGACTGCTCTTGGCTGCTGACCCAAGAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR GCA 90 bp | TACAACCACATACCACATTCACGTGCCTGGGTCCACCAGGTGCCCTaGCACAAGAACACAGCCCTGACCTGGAAGGGTCTGGAAGCACAG | + |
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Preference number: 1 (lower is better) Translates to: YNHIPHSRAWVHQVP*HKNTALTWKGLEAQ Trigger: CTGTGCTTCCAGACCCTTCCAGGTCAGGGCTGTGTTCTTGTGGCAGGGCACCTGGTGGACCCAGGCACGTGAATGTGGTATGTGGTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR GCA 90 bp | CTCCTGTGGCTTGTTTCCTCTTGTAACTATGTTGAGTTAGTTGAGTaGCAGTGGCAACCATCTACTGTTAGGTCGGTCGAAGCGCGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLWLVSSCNYVELVE*QWQPSTVRSVEARE Trigger: CTCTCGCGCTTCGACCGACCTAACAGTAGATGGTTGCCACTGGCACTCAACTAACTCAACATAGTTACAAGAGGAAACAAGCCACAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 90 bp | TGCAAACTCTGGCTTTCTAAGGGGACTGTAGAGGTGACAGGAGTCTaGCAGCCTCGTGTGGTTGTCCCTCTGTCCTCTAAAAAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: CKLWLSKGTVEVTGV*QPRVVVPLSSKKRK Trigger: TTTTCTCTTTTTAGAGGACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCCCGCCTGGCTCCCAGCTaGAATACCAGGCAGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GTVEVTGVWQPRVVVPLSRLAPS*NTRQVS Trigger: AGACACCTGCCTGGTATTTCAGCTGGGAGCCAGGCG...GGACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCGACAGCGTCTCCTCTTaGGTCAGCAGCCAAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GDCRGDRSLAASCGCPSVDSVSS*VSSQEQ Trigger: CTGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTC...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCCACAAGAACACAGCCCTaGCCTGGAAGGGTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GTVEVTGVWQPRVVVPLSTRTQP*PGRVWK Trigger: CTTCCAGACCCTTCCAGGTCAGGGCTGTGTTCTTGT...GGACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CCA 90 bp | AAGCTACTCTCCTCCGACAGCGTCTCCTCTTGGGTCAGCAGCCAAGAGCAGTCAGATGGAGCCCTCTGTTaGATGACACCCGGCGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KLLSSDSVSSWVSSQEQSDGALC*MTPGEV Trigger: GACTTCGCCGGGTGTCATCCAACAGAGGGCTCCATC...TGACTGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTCGGAGGAGAGTAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCTACAGTCCCAGCAGATaGAGCCCTCTGTTGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: GDCRGDRSLAASCGCPSVYSPSR*SPLLDD Trigger: GTCATCCAACAGAGGGCTCCATCTGCTGGGACTGTA...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR TCA 90 bp | ACCCACAATCTGTGCAAACTCTGGCTTTCTAAGGGGACTGTAGAGGTGACAGGATCCACAGAAGGCAACTaGGAGGCTGTAGGTGACGTG | + |
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Preference number: 2 (lower is better) Translates to: THNLCKLWLSKGTVEVTGSTEGN*EAVGDV Trigger: CACGTCACCTACAGCCTCTCAGTTGCCTTCTGTGGA...TCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCACAGATTGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACTGAAGAAATTCCTACAAAGGGCCCTTGTTTCGTGTCCAGATGGAAAATCACAGATCTGGAGCTaGCCCCACAGTACAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RRLKKFLQRALVSCPDGKSQIWS*PHSTVP Trigger: TGGGACTGTACTGTGGGGTCAGCTCCAGATCTGTGA...TTTTCCATCTGGACACGAAACAAGGGCCCTTTGTAGGAATTTCTTCAGTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CAA 90 bp | AGCAAGCACAGTGCTGAGTGGGCCCTCATCCACACACGGCTCTACTaGGTTGTTTTCATGTTTTACATGAACAATAGCAATCTCTTAATA | + |
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Preference number: 2 (lower is better) Translates to: SKHSAEWALIHTRLY*VVFMFYMNNSNLLI Trigger: TATTAAGAGATTGCTATTGTTCATGTAAAACATGAAAACAACCAAGTAGAGCCGTGTGTGGATGAGGGCCCACTCAGCACTGTGCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATTGTTTCGTGTCCAGATaGAAAAGCTACTCTCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHCFVSR*KSYSPP Trigger: CGGAGGAGAGTAGCTTTTCCATCTGGACACGAAACA...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTACACCCCCTTTGATTTCTAAGCTAGCACACAGCTTTCATTATTGGGTAACAAACCCTCTCCTGTaGCTTGTTTCCTCTTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: AFTPPLISKLAHSFHYWVTNPLL*LVSSCN Trigger: GTTACAAGAGGAAACAAGCCACAGGAGAGGGTTTGT...TACCCAATAATGAAAGCTGTGTGCTAGCTTAGAAATCAAAGGGGGTGTAAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | CACGGTGCTTCGGGGCCAGGTGGGCAAACCTTGAGCTaGCCAGCGGCAGAGGCACTTGCTGGAGAGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: HGASGPGGQTLS*PAAEALAGEVW Trigger: CCACACCTCTCCAGCAAGTGCCTCTGCCGCTGGCCAGCTCAAGGTTTGCCCACCTGGCCCCGAAGCACCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | CGAAACACGGTGCTTCGGGGCCAGGTGGGCAAACCTTaGGCTGGCCAGCGGCAGAGGCACTTGCTGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: RNTVLRGQVGKP*AGQRQRHLLER Trigger: CCTCTCCAGCAAGTGCCTCTGCCGCTGGCCAGCTCAAGGTTTGCCCACCTGGCCCCGAAGCACCGTGTTTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | GATCTGGAGCTGACCCCACAGTACAGTCCCAGCAGATaGAGCCCTCTGTTGGATGACACCCGGCGAAGTCGC | + |
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Preference number: 3 (lower is better) Translates to: DLELTPQYSPSR*SPLLDDTRRSR Trigger: GCGACTTCGCCGGGTGTCATCCAACAGAGGGCTCCATCTGCTGGGACTGTACTGTGGGGTCAGCTCCAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | TCTGTCCATCCTGTCCACGAGTCCACAGAAGGCAACTaGGAGGCTGTAGGTGACGTGGGTACTGCCGGACCC | + |
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Preference number: 3 (lower is better) Translates to: SVHPVHESTEGN*EAVGDVGTAGP Trigger: GGGTCCGGCAGTACCCACGTCACCTACAGCCTCTCAGTTGCCTTCTGTGGACTCGTGGACAGGATGGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | AAAACTACGGAGAAGCCACAAGGAAACCTGCGGCAGTaGGACACGGCTGTAGGCAGGCTAGACCTGCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: KTTEKPQGNLRQ*DTAVGRLDLPQ Trigger: CTGCGGCAGGTCTAGCCTGCCTACAGCCGTGTCCCACTGCCGCAGGTTTCCTTGTGGCTTCTCCGTAGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | GCAAACCTTGAGCTGGCCAGCGGCAGAGGCACTTGCTaGAGAGGTGTGGTCAGCGGATATGGGTCAGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: ANLELASGRGTC*RGVVSGYGSEG Trigger: TCCTTCTGACCCATATCCGCTGACCACACCTCTCCAGCAAGTGCCTCTGCCGCTGGCCAGCTCAAGGTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CAA 90 bp | AAGCTACTCTCCTCCGACAGCGTCTCCTCTTGGGTCAGCAGCCAAGAGCAGTCAAGATGGAGCCCTCTGTaGGATGACACCCGGCGAAGT | + |
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Preference number: 3 (lower is better) Translates to: KLLSSDSVSSWVSSQEQSRWSPL*DDTRRS Trigger: ACTTCGCCGGGTGTCATCCAACAGAGGGCTCCATCT...TGACTGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTCGGAGGAGAGTAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCCGCAGAAGAAAGCCCTTaGTCTCAGGAACCCGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GTVEVTGVWQPRVVVPLSAEESP*SQEPEA Trigger: AGCTTCGGGTTCCTGAGACAAAGGGCTTTCTTCTGC...GGACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | TTGGATGACACCCGGCGAAGTCGCCTGGCTCCCAGCTaGAATACCAGGCAGGTGTCTCTCTGTCCATCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LDDTRRSRLAPS*NTRQVSLCPSC Trigger: ACAGGATGGACAGAGAGACACCTGCCTGGTATTTCAGCTGGGAGCCAGGCGACTTCGCCGGGTGTCATCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | CGCAGAAGAAAGCCCTTTGTCTCAGGAACCCGAAGCTaGGGGAGAGCCCCGAGTTCATTTAGTGCCCGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RRRKPFVSGTRS*GRAPSSFSARH Trigger: GTGACGGGCACTAAATGAACTCGGGGCTCTCCCTCAGCTTCGGGTTCCTGAGACAAAGGGCTTTCTTCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCCACCCTCTCCTGTGGCTaGTTTCCTCTTGTAACTATG | + |
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Preference number: 3 (lower is better) Translates to: GTVEVTGVWQPRVVVPLSTLSCG*FPLVTM Trigger: CATAGTTACAAGAGGAAACAAGCCACAGGAGAGGGT...GGACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | AGCGCGAGAGCAGTGACCTTTACAGGTTGGAATCACTaGGAGACGGGCCAAGAAAAACCTCGTGCACTCGGG | + |
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Preference number: 3 (lower is better) Translates to: SARAVTFTGWNH*ETGQEKPRALG Trigger: CCCGAGTGCACGAGGTTTTTCTTGGCCCGTCTCTCAGTGATTCCAACCTGTAAAGGTCACTGCTCTCGCGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | GGTATGAAAATGGCTCGTGGCTGTCCAAGGAGCCGATaGCCACGATTGAGGCTACAACCACATACCACATTC | + |
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Preference number: 3 (lower is better) Translates to: GMKMARGCPRSR*PRLRLQPHTTF Trigger: GAATGTGGTATGTGGTTGTAGCCTCAATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | CACACAGCTTTCATTATTGGGTATGAAAATGGCTCGTaGCTGTCCAAGGAGCCGATGGCCACGATTGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: HTAFIIGYENGS*LSKEPMATIEA Trigger: AGCCTCAATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAATGAAAGCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CCA 72 bp | GGGGACAGGAGTTATACCCACAATCTGTGCAAACTCTaGCTTTCTAAGGGGACTGTAGAGGTGACAGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: GDRSYTHNLCKL*LSKGTVEVTGV Trigger: GACTCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCACAGATTGTGGGTATAACTCCTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR-3UTR CAA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATCGACAGCGTCTCCTCTaGGGTCAGCAGCCAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHRQRLL*GQQPRA Trigger: TGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTCG...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR GCA 72 bp | AAAGGACTACAGGGTCTCCAGAATTTAAAAGGCTGCTaGTCCAGGCAATCACACCTTCTGCCAACAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: KGLQGLQNLKGC*SRQSHLLPTMP Trigger: TGGCATTGTTGGCAGAAGGTGTGATTGCCTGGAGCAGCAGCCTTTTAAATTCTGGAGACCCTGTAGTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR TCA 72 bp | ATTTCTAAGCTAGCACACAGCTTTCATTATTGGGTATaGAAATGGCTCGTGGCTGTCCAAGGAGCCGATGGC | + |
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Preference number: 3 (lower is better) Translates to: ISKLAHSFHYWV*KWLVAVQGADG Trigger: GCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAATGAAAGCTGTGTGCTAGCTTAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR GCA 72 bp | TACAAAGGACTACAGGGTCTCCAGAATTTAAAAGGCTaGTGCTCCAGGCAATCACACCTTCTGCCAACAATG | + |
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Preference number: 3 (lower is better) Translates to: YKGLQGLQNLKG*CSRQSHLLPTM Trigger: CATTGTTGGCAGAAGGTGTGATTGCCTGGAGCAGCAGCCTTTTAAATTCTGGAGACCCTGTAGTCCTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR GCA 72 bp | CTTGTTTCCTCTTGTAACTATGTTGAGTTAGTTGAGTaGCAGTGGCAACCATCTACTGTTAGGTCGGTCGAA | + |
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Preference number: 3 (lower is better) Translates to: LVSSCNYVELVE*QWQPSTVRSVE Trigger: TTCGACCGACCTAACAGTAGATGGTTGCCACTGGCACTCAACTAACTCAACATAGTTACAAGAGGAAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CAA 72 bp | CCGAAACACGGTGCTTCGGGGCCAGGTGGGCAAACCTaGAGCTGGCCAGCGGCAGAGGCACTTGCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PKHGASGPGGQT*SWPAAEALAGE Trigger: CTCTCCAGCAAGTGCCTCTGCCGCTGGCCAGCTCAAGGTTTGCCCACCTGGCCCCGAAGCACCGTGTTTCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR TCA 90 bp | CTGGAGCTGACCCCACAGTACAGTCCCAGCAGATGGAGCCCTCTGTTGGATGACCCAGCTGCCCGTCCGTaGACTTGCCGGTGTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LELTPQYSPSRWSPLLDDPAARP*TCRCRA Trigger: TGCACGACACCGGCAAGTTCACGGACGGGCAGCTGG...GTCATCCAACAGAGGGCTCCATCTGCTGGGACTGTACTGTGGGGTCAGCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCAACTTGCCGGTGTCGTaGAGGGCGCGCACCTCATCG | + |
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Preference number: 4 (lower is better) Translates to: GDCRGDRSLAASCGCPSVNLPVS*RARTSS Trigger: CGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTT...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR TCA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCCGTCCATGCTGCTCATaGGCAGGCCGATGGTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: GDCRGDRSLAASCGCPSVRPCCS*AGRWFR Trigger: GCGAAACCATCGGCCTGCTCATGAGCAGCATGGACG...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | AAGCTACTCTCCTCCGACAGCGTCTCCTCTTGGGTCAGCAGCCAAGAGCAGTCATGCCCAGCTTCCCGCTaGAGTGGCGGATCAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: KLLSSDSVSSWVSSQEQSCPASR*SGGSGR Trigger: ACGACCTGATCCGCCACTGCAGCGGGAAGCTGGGCA...TGACTGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTCGGAGGAGAGTAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | ACCCACAATCTGTGCAAACTCTGGCTTTCTAAGGGGACTGTAGAGGTGACAGGAGGCAACGGCTTGGTCTaGCCGTTGGGCCGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: THNLCKLWLSKGTVEVTGGNGLV*PLGRSP Trigger: AGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCC...TCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCACAGATTGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | GTGTCTCTCTGTCCATCCTGTCCACGAGTCCACAGAAGGCAACTGAGAGGCTGTCGTCCACCACGCAGATaGCGTGCTTGTTCATGCACG | + |
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Preference number: 4 (lower is better) Translates to: VSLCPSCPRVHRRQLRGCRPPRR*RACSCT Trigger: CGTGCATGAACAAGCACGGCATCTGCGTGGTGGACG...ACAGCCTCTCAGTTGCCTTCTGTGGACTCGTGGACAGGATGGACAGAGAGACAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | CGCCCGTCCTTTACGTTCAGGCAGAAGCAACACGTCGTCACTCACTGGCAACAAGAAGAGTCACTCTTCTaGCTGACCAGCTGCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: RPSFTFRQKQHVVTHWQQEESLF*LTSCPS Trigger: GGACGGGCAGCTGGTCAGCCAGAAGAGTGACTCTTC...TTGTTGCCAGTGAGTGACGACGTGTTGCTTCTGCCTGAACGTAAAGGACGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | AAGCTACTCTCCTCCGACAGCGTCTCCTCTTGGGTCAGCAGCCAAGAGCAGTCATGCCGTGCTTGTTCATaGACGGCACGATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLSSDSVSSWVSSQEQSCRACS*TARCTP Trigger: TGGAGTACATCGTGCCGTGCATGAACAAGCACGGCA...TGACTGCTCTTGGCTGCTGACCCAAGAGGAGACGCTGTCGGAGGAGAGTAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | CGCCCGTCCTTTACGTTCAGGCAGAAGCAACACGTCGTCACTCACTGGCAACAAGCCTGTTCCGTTGCCTaGGTAACAAGCAACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPSFTFRQKQHVVTHWQQACSVA*VTSNHG Trigger: GCCATGGTTGCTTGTTACCCAGGCAACGGAACAGGC...TTGTTGCCAGTGAGTGACGACGTGTTGCTTCTGCCTGAACGTAAAGGACGGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| 3UTR CAA 72 bp | GGTCGGTCGAAGCGCGAGAGCAGTGACCTTTACAGGTaGGAATCACTGAGAGACGGGCCAAGAAAAACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRSKRESSDLYR*ESLRDGPRKTS Trigger: CGAGGTTTTTCTTGGCCCGTCTCTCAGTGATTCCAACCTGTAAAGGTCACTGCTCTCGCGCTTCGACCGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | ATTATTGGGTATGAAAATGGCTCGTGGCTGTCCAAGGAGCCGATGGCCACGATTTTCTGGCTGACCAGCTaGCCGTCCGTGAACTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IIGYENGSWLSKEPMATIFWLTS*PSVNLP Trigger: CGGCAAGTTCACGGACGGGCAGCTGGTCAGCCAGAA...AATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR TCA 90 bp | ATTATTGGGTATGAAAATGGCTCGTGGCTGTCCAAGGAGCCGATGGCCACGATTGCTGGCTGTACTTCATaGGGGTTACGCCGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IIGYENGSWLSKEPMATIAGCTS*GLRRSD Trigger: GTCTGACCGGCGTAACCCTCATGAAGTACAGCCAGC...AATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATGCTTGGTCTGCCCGTTaGGCCGCAGCCCTCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHAWSAR*AAALHR Trigger: CCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGC...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATACGCGGGCAACGGCTTaGTCTGCCCGTTGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHTRATA*SARWAA Trigger: TGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGT...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | GCTTTTACACCCCCTTTGATTTCTAAGCTAGCACACAGCTTTCATTATTGGGTAGCTGCCCGGTCTCCCTaGCCAGGAAGTCGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AFTPPLISKLAHSFHYWVAARSP*PGSRPP Trigger: TGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGC...TACCCAATAATGAAAGCTGTGTGCTAGCTTAGAAATCAAAGGGGGTGTAAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATTCATCGCCGATCTGCTaGCCGGTCTCCCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHSSPIC*PVSLPR Trigger: CCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGA...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | CGCCCGTCCTTTACGTTCAGGCAGAAGCAACACGTCGTCACTCACTGGCAACAATCTTCCATCTCCATTTaGGTTATCAACGTGACGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPSFTFRQKQHVVTHWQQSSISI*VINVTD Trigger: GTCCGTCACGTTGATAACCCAAATGGAGATGGAAGA...TTGTTGCCAGTGAGTGACGACGTGTTGCTTCTGCCTGAACGTAAAGGACGGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | GCCCTCATCCACACACGGCTCTACTTGGTTGTTTTCATGTTTTACATGAACAATAGCTTCCCGCTGCAGTaGCGGATCAGGTCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ALIHTRLYLVVFMFYMNNSFPLQ*RIRSSM Trigger: CATGGACGACCTGATCCGCCACTGCAGCGGGAAGCT...ATTGTTCATGTAAAACATGAAAACAACCAAGTAGAGCCGTGTGTGGATGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR GCA 90 bp | ATTATTGGGTATGAAAATGGCTCGTGGCTGTCCAAGGAGCCGATGGCCACGATTATACCAAACAGTTATTaGGTACCTTGTGGCGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: IIGYENGSWLSKEPMATIIPNSY*VPCGVC Trigger: GCATACGCCACAAGGTACGCAATAACTGTTTGGTAT...AATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CCA 90 bp | GTGCTAAGACGGGTGTCAAGGAAAATACACAGAAATAGTTCTGCATACACACATTACCTCCACTTACCTTaGCGTCCCAGTCTTTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLRRVSRKIHRNSSAYTHYLHLP*RPSLYL Trigger: TAAATAAAGACTGGGACGCCAAGGTAAGTGGAGGTA...ATGTGTGTATGCAGAACTATTTCTGTGTATTTTCCTTGACACCCGTCTTAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | ACGATGTACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTTGGTCTaGCCGTTGGGCCGCAGCCCTCCACCGGGACTCAGCGCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TMYSRASFNAGNGLV*PLGRSPPPGLSASP Trigger: CGGGGAGGCGCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTACATCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | AACTTGCCGGTGTCGTGCAGGGCGCGCACCTCATCGCCGATCTGCTaGCCGGTCTCCCTGCCCAGGAAGTCGTCCACCACGCAGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NLPVSCRARTSSPIC*PVSLPRKSSTTQMP Trigger: CGGCATCTGCGTGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | CTCTTCTGGCTGACCAGCTGCCCGTCCGTGAACTTGCCGGTGTCGTaGAGGGCGCGCACCTCATCGCCGATCTGCTGCCCGGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFWLTSCPSVNLPVS*RARTSSPICCPVSL Trigger: CAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTTCACGGACGGGCAGCTGGTCAGCCAGAAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 90 bp | ACGGCACGATGTACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTTaGTCTGCCCGTTGGGCCGCAGCCCTCCACCGGGACTCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TARCTPEPASTRATA*SARWAAALHRDSAP Trigger: AGGCGCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTACATCGTGCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | CGTGCAGGGCGCGCACCTCATCGCCGATCTGCTGCCCGGTCTCCCTaGCCAGGAAGTCGTCCACCACGCAGATGCCGTGCTTGTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGRAPHRRSAARSP*PGSRPPRRCRACSC Trigger: GCATGAACAAGCACGGCATCTGCGTGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | GTGAACTTGCCGGTGTCGTGCAGGGCGCGCACCTCATCGCCGATCTaGTGCCCGGTCTCCCTGCCCAGGAAGTCGTCCACCACGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VNLPVSCRARTSSPI*CPVSLPRKSSTTQM Trigger: CATCTGCGTGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTTCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
||
| CDS TCA 90 bp | CCAGCTTCCCGCTGCAGTGGCGGATCAGGTCGTCCATGCTGCTCATaGGCAGGCCGATGGTTTCGCAGCCGGGCTCTTTGCCCTCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: PASRCSGGSGRPCCS*AGRWFRSRALCPRS Trigger: GGATCGAGGGCAAAGAGCCCGGCTGCGAAACCATCGGCCTGCTCATGAGCAGCATGGACGACCTGATCCGCCACTGCAGCGGGAAGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCTGCCCGTCCGTGAACTaGCCGGTGTCGTGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GDCRGDRSLAASCGCPSVCPSVN*PVSCRA Trigger: CGCCCTGCACGACACCGGCAAGTTCACGGACGGGCA...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | GGGGACTGTAGAGGTGACAGGAGTCTGGCAGCCTCGTGTGGTTGTCCCTCTGTCTCGCAGCCGGGCTCTTaGCCCTCGATCCAGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GDCRGDRSLAASCGCPSVSQPGS*PSIQVI Trigger: GATCACCTGGATCGAGGGCAAAGAGCCCGGCTGCGA...GACAGAGGGACAACCACACGAGGCTGCCAGACTCCTGTCACCTCTACAGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | ACCCACAATCTGTGCAAACTCTGGCTTTCTAAGGGGACTGTAGAGGTGACAGGAAACGCGGGCAACGGCTaGGTCTGCCCGTTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: THNLCKLWLSKGTVEVTGNAGNG*VCPLGR Trigger: GCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTT...TCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCACAGATTGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 90 bp | GGTAACAAGCAACCATGGCTTTCGTTCGGCCGTTTATCCTGTAGTTaGCCAGCTTCCCGCTGCAGTGGCGGATCAGGTCGTCCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GNKQPWLSFGRLSCS*PASRCSGGSGRPCC Trigger: GCAGCATGGACGACCTGATCCGCCACTGCAGCGGGAAGCTGGGCAACTACAGGATAAACGGCCGAACGAAAGCCATGGTTGCTTGTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTGACCCCACAGTACAGTCCCAGCAGATGGAGCCCTCTGTTGGATGACATCTTCCATCTCCATTaGGGTTATCAACGTGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LELTPQYSPSRWSPLLDDIFHLH*GYQRDG Trigger: TCCGTCACGTTGATAACCCAAATGGAGATGGAAGAT...GTCATCCAACAGAGGGCTCCATCTGCTGGGACTGTACTGTGGGGTCAGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | GTGTCTCTCTGTCCATCCTGTCCACGAGTCCACAGAAGGCAACTGAGAGGCTGTCAGTTATTGCGTACCTaGTGGCGTATGCTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSLCPSCPRVHRRQLRGCQLLRT*WRMLAV Trigger: TACAGCCAGCATACGCCACAAGGTACGCAATAACTG...ACAGCCTCTCAGTTGCCTTCTGTGGACTCGTGGACAGGATGGACAGAGAGACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 90 bp | TCCATTTGGGTTATCAACGTGACGGACATAGCCTGTTCCGTTGCCTaGGTAACAAGCAACCATGGCTTTCGTTCGGCCGTTTATCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SIWVINVTDIACSVA*VTSNHGFRSAVYPV Trigger: TACAGGATAAACGGCCGAACGAAAGCCATGGTTGCTTGTTACCCAGGCAACGGAACAGGCTATGTCCGTCACGTTGATAACCCAAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | ATTATTGGGTATGAAAATGGCTCGTGGCTGTCCAAGGAGCCGATGGCCACGATTATACCTCCACTTACCTaGGCGTCCCAGTCTTTATTT | + |
|
Preference number: 5 (lower is better) Translates to: IIGYENGSWLSKEPMATIIPPLT*ASQSLF Trigger: AAATAAAGACTGGGACGCCAAGGTAAGTGGAGGTAT...AATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | ACCCACAATCTGTGCAAACTCTGGCTTTCTAAGGGGACTGTAGAGGTGACAGGAAATACCAAACAGTTATaGCGTACCTTGTGGCGTATG | + |
|
Preference number: 5 (lower is better) Translates to: THNLCKLWLSKGTVEVTGNTKQL*RTLWRM Trigger: CATACGCCACAAGGTACGCAATAACTGTTTGGTATT...TCCTGTCACCTCTACAGTCCCCTTAGAAAGCCAGAGTTTGCACAGATTGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | GCTTTTACACCCCCTTTGATTTCTAAGCTAGCACACAGCTTTCATTATTGGGTACTGACTGAATTGGGCTaGAGTTCAACCCTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: AFTPPLISKLAHSFHYWVLTELG*SSTLTP Trigger: AGGTGTGAGGGTTGAACTCAAGCCCAATTCAGTCAG...TACCCAATAATGAAAGCTGTGTGCTAGCTTAGAAATCAAAGGGGGTGTAAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS-3UTR CAA 90 bp | GCCCTCATCCACACACGGCTCTACTTGGTTGTTTTCATGTTTTACATGAACAATTCTTTGCTGACTGAATaGGGCTTGAGTTCAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALIHTRLYLVVFMFYMNNSLLTE*GLSSTL Trigger: GAGGGTTGAACTCAAGCCCAATTCAGTCAGCAAAGA...ATTGTTCATGTAAAACATGAAAACAACCAAGTAGAGCCGTGTGTGGATGAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CAA 90 bp | TACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTTGGTCTGCCCGTaGGGCCGCAGCCCTCCACCGGGACTCAGCGCCTCCCCGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: YSRASFNAGNGLVCP*GRSPPPGLSASPGP Trigger: CGGCCCCGGGGAGGCGCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 72 bp | CCAGCTTCAACGCGGGCAACGGCTTGGTCTGCCCGTTaGGCCGCAGCCCTCCACCGGGACTCAGCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PASTRATAWSAR*AAALHRDSAPP Trigger: GGGAGGCGCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | CCGGTGTCGTGCAGGGCGCGCACCTCATCGCCGATCTaGTGCCCGGTCTCCCTGCCCAGGAAGTCGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVSCRARTSSPI*CPVSLPRKSST Trigger: GGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CAA 90 bp | CACGGCACGATGTACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTaGGTCTGCCCGTTGGGCCGCAGCCCTCCACCGGGACTCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HGTMYSRASFNAGNG*VCPLGRSPPPGLSA Trigger: GGCGCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTACATCGTGCCGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | TCCAGAGCCAGCTTCAACGCGGGCAACGGCTTGGTCTaGCCGTTGGGCCGCAGCCCTCCACCGGGACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRASFNAGNGLV*PLGRSPPPGLS Trigger: GCTGAGTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | GTGTCGTGCAGGGCGCGCACCTCATCGCCGATCTGCTaGCCGGTCTCCCTGCCCAGGAAGTCGTCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: VSCRARTSSPIC*PVSLPRKSSTT Trigger: CGTGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | CTGACCAGCTGCCCGTCCGTGAACTTGCCGGTGTCGTaGAGGGCGCGCACCTCATCGCCGATCTGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LTSCPSVNLPVS*RARTSSPICCP Trigger: CGGGCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTTCACGGACGGGCAGCTGGTCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | CGCGCACCTCATCGCCGATCTGCTGCCCGGTCTCCCTaGCCAGGAAGTCGTCCACCACGCAGATGCCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAPHRRSAARSP*PGSRPPRRCRA Trigger: AGCACGGCATCTGCGTGGTGGACGACTTCCTGGGCAGGGAGACCGGGCAGCAGATCGGCGATGAGGTGCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 72 bp | TGTACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTTaGTCTGCCCGTTGGGCCGCAGCCCTCCACCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CTPEPASTRATA*SARWAAALHRD Trigger: GTCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CAA 72 bp | ATGTACTCCAGAGCCAGCTTCAACGCGGGCAACGGCTaGGTCTGCCCGTTGGGCCGCAGCCCTCCACCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MYSRASFNAGNG*VCPLGRSPPPG Trigger: TCCCGGTGGAGGGCTGCGGCCCAACGGGCAGACCAAGCCGTTGCCCGCGTTGAAGCTGGCTCTGGAGTACAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CAA 72 bp | TCACTCTTCTGGCTGACCAGCTGCCCGTCCGTGAACTaGCCGGTGTCGTGCAGGGCGCGCACCTCATCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLFWLTSCPSVN*PVSCRARTSSP Trigger: CGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTTCACGGACGGGCAGCTGGTCAGCCAGAAGAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS TCA 72 bp | CGCTGCAGTGGCGGATCAGGTCGTCCATGCTGCTCATaGGCAGGCCGATGGTTTCGCAGCCGGGCTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSGGSGRPCCS*AGRWFRSRALC Trigger: GCAAAGAGCCCGGCTGCGAAACCATCGGCCTGCTCATGAGCAGCATGGACGACCTGATCCGCCACTGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CAA 90 bp | TTGGAAGAGTCACTCTTCTGGCTGACCAGCTGCCCGTCCGTGAACTaGCCGGTGTCGTGCAGGGCGCGCACCTCATCGCCGATCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEESLFWLTSCPSVN*PVSCRARTSSPICC Trigger: GCAGCAGATCGGCGATGAGGTGCGCGCCCTGCACGACACCGGCAAGTTCACGGACGGGCAGCTGGTCAGCCAGAAGAGTGACTCTTCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
||
| CDS GCA 72 bp | ATGTCCTTGGAAGAGTCACTCTTCTGGCTGACCAGCTaGCCGTCCGTGAACTTGCCGGTGTCGTGCAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: MSLEESLFWLTS*PSVNLPVSCRA Trigger: CGCCCTGCACGACACCGGCAAGTTCACGGACGGGCAGCTGGTCAGCCAGAAGAGTGACTCTTCCAAGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS GCA 72 bp | CAACCATGGCTTTCGTTCGGCCGTTTATCCTGTAGTTaGCCAGCTTCCCGCTGCAGTGGCGGATCAGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QPWLSFGRLSCS*PASRCSGGSGR Trigger: ACGACCTGATCCGCCACTGCAGCGGGAAGCTGGGCAACTACAGGATAAACGGCCGAACGAAAGCCATGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
||
| CDS GCA 72 bp | TTGGGTTATCAACGTGACGGACATAGCCTGTTCCGTTaGCTGGGTAACAAGCAACCATGGCTTTCGTTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LGYQRDGHSLFR*LGNKQPWLSFG Trigger: GCCGAACGAAAGCCATGGTTGCTTGTTACCCAGGCAACGGAACAGGCTATGTCCGTCACGTTGATAACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 72 bp | GTTATCAACGTGACGGACATAGCCTGTTCCGTTGCCTaGGTAACAAGCAACCATGGCTTTCGTTCGGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: VINVTDIACSVA*VTSNHGFRSAV Trigger: AACGGCCGAACGAAAGCCATGGTTGCTTGTTACCCAGGCAACGGAACAGGCTATGTCCGTCACGTTGATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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| CDS CCA 72 bp | ATAATATATACATGTCACGCATCTTCCATCTCCATTTaGGTTATCAACGTGACGGACATAGCCTGTTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: IIYTCHASSISI*VINVTDIACSV Trigger: AACGGAACAGGCTATGTCCGTCACGTTGATAACCCAAATGGAGATGGAAGATGCGTGACATGTATATATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034469.7 |
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