Pregenerated sensors for EGFLAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042961Ensembl transcript IDs: ENSMUST00000058593.10, ENSMUST00000096494.5, ENSMUST00000160207.8
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACCCAAGGGGACAGAGGCAGATGTAGGAGTCGGCCTTGATGGCTaGGCAGGTGCCCCCGTGGATGCAGGAGGCTTCGTCACAGATCCC | + |
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Preference number: 1 (lower is better) Translates to: EPKGTEADVGVGLDG*AGAPVDAGGFVTDP Trigger: GGGATCTGTGACGAAGCCTCCTGCATCCACGGGGGCACCTGCGCAGCCATCAAGGCCGACTCCTACATCTGCCTCTGTCCCCTTGGGTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | CGGGACCCAGGGTTCGGACGGTGTTGCTGGGCCAGCTGCGCGGACTaGAGCCGTGAGCATTCATGGCTTTCACAGCAAACTGGTAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: RDPGFGRCCWASCAD*SREHSWLSQQTGSW Trigger: CCAACTACCAGTTTGCTGTGAAAGCCATGAATGCTCACGGCTTCAGTCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCCTGGGTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | GTGACTGCACACAGCCTTGGAAGCCACGGTTTGTCCCTGTTGCTCTaGCCAGCCAGTAAGCACTGGGAGCGCCCCCGAGGTACAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: VTAHSLGSHGLSLLL*PASKHWERPRGTEV Trigger: CACCTCTGTACCTCGGGGGCGCTCCCAGTGCTTACTGGCTGGTCAGAGCAACAGGGACAAACCGTGGCTTCCAAGGCTGTGTGCAGTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | ACTGTAATCTTCCCGGACTGGCCATCCCTGACAGCCTTGACTCGGTaGCACCGGCCATCGCTGAAGGAACCGTTCACCATGATGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: TVIFPDWPSLTALTR*HRPSLKEPFTMMEA Trigger: GGCTTCCATCATGGTGAACGGTTCCTTCAGCGATGGCCGGTGGCACCGAGTCAAGGCTGTCAGGGATGGCCAGTCCGGGAAGATTACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | TCAAGACCTCTGAGTGCAGCATCAGGCAGGGTCTCCGGGCCTCTGTaGTTGCAGGATAGAGGCTATGTCCCTTGGGCAAGGTCAGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: SRPLSAASGRVSGPL*LQDRGYVPWARSAG Trigger: ACCAGCTGACCTTGCCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | AAGATCCCATTCTTCGCTGTGCGAGACACACGTAGGTCATGCCATTaGCCTAGGGTGAGGGGAGCCTCACTCCTGAGAACTCCCGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KIPFFAVRDTRRSCH*PRVRGASLLRTPVP Trigger: TGGGACGGGAGTTCTCAGGAGTGAGGCTCCCCTCACCCTAGGCCAATGGCATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | ACCTGTAAGATCCCATTCTTCGCTGTGCGAGACACACGTAGGTCATaGCATTGGCCTAGGGTGAGGGGAGCCTCACTCCTGAGAACTCCC | + |
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Preference number: 1 (lower is better) Translates to: TCKIPFFAVRDTRRS*HWPRVRGASLLRTP Trigger: GGGAGTTCTCAGGAGTGAGGCTCCCCTCACCCTAGGCCAATGGCATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGATCTTACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | CCACGGCGTCTTCCACGAGGGAAATGTGGTAATCGGTGGACAGTGTaGAATGGGAGATGCAGCCCACAAGGCCTCGCAGGTATTGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PRRLPRGKCGNRWTV*NGRCSPQGLAGIVC Trigger: ACAGACAATACCTGCGAGGCCTTGTGGGCTGCATCTCCCATTTCACACTGTCCACCGATTACCACATTTCCCTCGTGGAAGACGCCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | TGGGAGATGCAGCCCACAAGGCCTCGCAGGTATTGTCTGTTCGTGTaGAGAGCGATTTCCTTCATTCCACCCACGTACAGAGCACCGTTG | + |
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Preference number: 1 (lower is better) Translates to: WEMQPTRPRRYCLFV*RAISFIPPTYRAPL Trigger: CAACGGTGCTCTGTACGTGGGTGGAATGAAGGAAATCGCTCTGCACACGAACAGACAATACCTGCGAGGCCTTGTGGGCTGCATCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | CAGAACCACAGTCGAAGCGGAATTCCACGTGGCCCGCAGCCATATTaGTGGAGAGGAAGTCCTTGCTGCCCGTGTCGTAGCTGTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: QNHSRSGIPRGPQPY*WRGSPCCPCRSCTK Trigger: TTTTGTACAGCTACGACACGGGCAGCAAGGACTTCCTCTCCATCAATATGGCTGCGGGCCACGTGGAATTCCGCTTCGACTGTGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | CACGTACAGAGCACCGTTGATGTTAAGCTGCCGCATCAAGCCCGGTaGCTTGCCTGTTCTGGCTCCGTAGTCATCCACTGTAATCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: HVQSTVDVKLPHQAR*LACSGSVVIHCNLP Trigger: GGGAAGATTACAGTGGATGACTACGGAGCCAGAACAGGCAAGTCACCGGGCTTGATGCGGCAGCTTAACATCAACGGTGCTCTGTACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | CTTGTGGGGACCAGCCAGGGAGCCAGCTGTCTGCAGTCATGTGTATaGATAGCACAGGGCACAGCTGAACCATGGTACAGAAGAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LVGTSQGASCLQSCV*IAQGTAEPWYRRRK Trigger: CTTTCTTCTTCTGTACCATGGTTCAGCTGTGCCCTGTGCTATGCATACACATGACTGCAGACAGCTGGCTCCCTGGCTGGTCCCCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR GCA 90 bp | CACTTCAGAATCGGAAACCACAAGGACATGTGGCTGTTGGGGTGCTaGAGGGGGCAGGCAGGAATCTTGAGACAAAGTGGTCACATGTCG | + |
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Preference number: 1 (lower is better) Translates to: HFRIGNHKDMWLLGC*RGQAGILRQSGHMS Trigger: CGACATGTGACCACTTTGTCTCAAGATTCCTGCCTGCCCCCTGCAGCACCCCAACAGCCACATGTCCTTGTGGTTTCCGATTCTGAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | CCTGGCTTCAAATCTCCAATCACTTCCTCAGTGATTAGGGTATCCTaGCCAACCGGGACGTTGTGTGACCGCTCCCGCAGGGACTTATCT | + |
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Preference number: 1 (lower is better) Translates to: PGFKSPITSSVIRVS*PTGTLCDRSRRDLS Trigger: AGATAAGTCCCTGCGGGAGCGGTCACACAACGTCCCGGTTGGCCAGGATACCCTAATCACTGAGGAAGTGATTGGAGATTTGAAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | TCTCCAAGAAAGGGCCACTTCAGAATCGGAAACCACAAGGACATGTaGCTGTTGGGGTGCTGCAGGGGGCAGGCAGGAATCTTGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: SPRKGHFRIGNHKDM*LLGCCRGQAGILRQ Trigger: TTGTCTCAAGATTCCTGCCTGCCCCCTGCAGCACCCCAACAGCCACATGTCCTTGTGGTTTCCGATTCTGAAGTGGCCCTTTCTTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | AGCCAGCTGTCTGCAGTCATGTGTATGCATAGCACAGGGCACAGCTaGACCATGGTACAGAAGAAGAAAGCACCCTTCTCTGTCGGACCC | + |
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Preference number: 1 (lower is better) Translates to: SQLSAVMCMHSTGHS*TMVQKKKAPFSVGP Trigger: GGGTCCGACAGAGAAGGGTGCTTTCTTCTTCTGTACCATGGTTCAGCTGTGCCCTGTGCTATGCATACACATGACTGCAGACAGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR CCA 90 bp | GCTGCCCGTGTCGTAGCTGTACAAAAGGACACCATCCCCCGAGTCTaGCCGAAAGGTGATCTCGAACTCGGTGAAAGAAAGATAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: AARVVAVQKDTIPRV*PKGDLELGERKIML Trigger: CAGCATTATCTTTCTTTCACCGAGTTCGAGATCACCTTTCGGCCAGACTCGGGGGATGGTGTCCTTTTGTACAGCTACGACACGGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | CTAAAAGAGAATGGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTaGTACCGCTCCCCTGACACTACAAATGGCCTGATCACATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LKENGPFSQWPTLVT*YRSPDTTNGLITSP Trigger: TGGAGATGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACCATTCTCTTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | TTAGAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTaGGGACCAGCCAGGGAGCCAGCTGTCTGCAGTCATGTGTATGCA | + |
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Preference number: 1 (lower is better) Translates to: LEGQHSSHLSLSKSL*GPAREPAVCSHVYA Trigger: TGCATACACATGACTGCAGACAGCTGGCTCCCTGGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR GCA 90 bp | CAAGCCATCCTCCGCCTCTGCCCTGAACTCCAGAGTAACCTGAAATaGCTGATAAGAGTTCTTCAGAGGCTCAAAGGTTACGTAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: QAILRLCPELQSNLK*LIRVLQRLKGYVGV Trigger: CACTCCTACGTAACCTTTGAGCCTCTGAAGAACTCTTATCAGGCATTTCAGGTTACTCTGGAGTTCAGGGCAGAGGCGGAGGATGGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | GCCGTGAGCATTCATGGCTTTCACAGCAAACTGGTAGTTGGTATCTaGATCAAGGCCTTTGATAACCATGGAGTCCATCTGCAGGCGCTC | + |
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Preference number: 1 (lower is better) Translates to: AVSIHGFHSKLVVGI*IKAFDNHGVHLQAL Trigger: GAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGATACCAACTACCAGTTTGCTGTGAAAGCCATGAATGCTCACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | ATGTCGAGGGAAGCTAAGCCTCCCCTTGCCAGTCTGACTGTAGGCTaGTACGCTTACTTGATATTCAGTGCCTGGCTTCAAATCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: MSREAKPPLASLTVG*YAYLIFSAWLQISN Trigger: ATTGGAGATTTGAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCCTACAGTCAGACTGGCAAGGGGAGGCTTAGCTTCCCTCGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | AACTGCAGCATCCCATTCAGGCCATCTCTGTACAGTGTCACCGTATaGCAGGCCCCAAGTTTGATTTTGGTCTCACTTATGATGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: NCSIPFRPSLYSVTV*QAPSLILVSLMMMA Trigger: TGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | TTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATaGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAAT | + |
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Preference number: 1 (lower is better) Translates to: LNRQHILKENGPFSQ*PTLVTCYRSPDTTN Trigger: ATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | GATATTTGGGTTGTCATACGTCAGGTAGCTGCGGCCGATGAACTGTaGGATCTCGATGGCTTCTATAATAGTATTGAGGCAGTGGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: DIWVVIRQVAAADEL*DLDGFYNSIEAVVP Trigger: GGGAACCACTGCCTCAATACTATTATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGCAGCTACCTGACGTATGACAACCCAAATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR TCA 90 bp | CAACAGGCCATCCTTGGCGGTTGTCTTAAACCTCATGAACGCATTTaGCCTCGATCCAGACACCCTCTTGAGGATATTTGGGTTGTCATA | + |
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Preference number: 1 (lower is better) Translates to: QQAILGGCLKPHERI*PRSRHPLEDIWVVI Trigger: TATGACAACCCAAATATCCTCAAGAGGGTGTCTGGATCGAGGTCAAATGCGTTCATGAGGTTTAAGACAACCGCCAAGGATGGCCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | GATGGTCCGGTCGTTGAGGATGATCTTCTGAATGCTCCCACTAAATaGATGGAGGATCCCCGAGTTCTTCTTGACATCATCGTAATTTGG | + |
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Preference number: 1 (lower is better) Translates to: DGPVVEDDLLNAPTK*MEDPRVLLDIIVIW Trigger: CCAAATTACGATGATGTCAAGAAGAACTCGGGGATCCTCCATCCATTTAGTGGGAGCATTCAGAAGATCATCCTCAACGACCGGACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | CAGCTCTTGTCAAAATCTAATGAATTCCACAGAGTAGGACTGAATTaGGGCACTTCCTTCATTCTCTCCAGGTCTCCAAGAAAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: QLLSKSNEFHRVGLN*GTSFILSRSPRKGH Trigger: GTGGCCCTTTCTTGGAGACCTGGAGAGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCTGTGGAATTCATTAGATTTTGACAAGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CCA 90 bp | GGATCAAGGCCTTTGATAACCATGGAGTCCATCTGCAGGCGCTCTTaGATTATGGTCCAGCTCTTGTCAAAATCTAATGAATTCCACAGA | + |
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Preference number: 1 (lower is better) Translates to: GSRPLITMESICRRS*IMVQLLSKSNEFHR Trigger: TCTGTGGAATTCATTAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR GCA 90 bp | AAAACTGTGCTCTGCACAAAGCTCAAGTCTCTGCTGAATGGATGCTaGACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: KTVLCTKLKSLLNGC*TNKNRVVPETNYRL Trigger: GAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTTGAGCTTTGTGCAGAGCACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR GCA 90 bp | CTAAAAACTGTGCTCTGCACAAAGCTCAAGTCTCTGCTGAATGGATaGTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATAGG | + |
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Preference number: 1 (lower is better) Translates to: LKTVLCTKLKSLLNG*CTNKNRVVPETNYR Trigger: CCTATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTTGAGCTTTGTGCAGAGCACAGTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR GCA 90 bp | TTTAGCCATCTCTTAGACGTCTTAATATGCCTAAAAACTGTGCTCTaGACAAAGCTCAAGTCTCTGCTGAATGGATGCTGCACAAACAAG | + |
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Preference number: 1 (lower is better) Translates to: FSHLLDVLICLKTVL*TKLKSLLNGCCTNK Trigger: CTTGTTTGTGCAGCATCCATTCAGCAGAGACTTGAGCTTTGTGCAGAGCACAGTTTTTAGGCATATTAAGACGTCTAAGAGATGGCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR TCA 90 bp | GATGTGGCCTCTGCAGGATCAGTCACACCTTCACAAATGACTGAATaGGTTCTTCCTCTTTCCCTTATTCATATTTATTACACACTTTCC | + |
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Preference number: 1 (lower is better) Translates to: DVASAGSVTPSQMTE*VLPLSLIHIYYTLS Trigger: GGAAAGTGTGTAATAAATATGAATAAGGGAAAGAGGAAGAACTCATTCAGTCATTTGTGAAGGTGTGACTGATCCTGCAGAGGCCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR TCA 90 bp | TGCAGATGTGGCCTCTGCAGGATCAGTCACACCTTCACAAATGACTaGATGAGTTCTTCCTCTTTCCCTTATTCATATTTATTACACACT | + |
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Preference number: 1 (lower is better) Translates to: CRCGLCRISHTFTND*MSSSSFPYSYLLHT Trigger: AGTGTGTAATAAATATGAATAAGGGAAAGAGGAAGAACTCATTCAGTCATTTGTGAAGGTGTGACTGATCCTGCAGAGGCCACATCTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR CCA 90 bp | AAATGGATGGAGGATCCCCGAGTTCTTCTTGACATCATCGTAATTTaGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: KWMEDPRVLLDIIVI*DSTNKNVRITLNLG Trigger: ACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCCAAATTACGATGATGTCAAGAAGAACTCGGGGATCCTCCATCCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGTCGCACTCATAACCCTCCTTCCTGGGCCGACAGCTGCCCCCATGGGCACAGGTGCCCCCGTGGATaGAGGAGGCTTCGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: DSRTHNPPSWADSCPHGHRCPRG*RRLRHR Trigger: TCTGTGACGAAGCCTCCTGCATCCACGGGGGCACCT...GTGCCCATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATGAGTGCGACTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGTCGCACTCATAACCCTCCTTCCTGGGCCGACAGCTGCCCCCATGGGCACACCATGGAGTCCATCTaGAGGCGCTCTTGGATTATG | + |
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Preference number: 2 (lower is better) Translates to: DSRTHNPPSWADSCPHGHTMESI*RRSWIM Trigger: CATAATCCAAGAGCGCCTGCAGATGGACTCCATGGT...GTGCCCATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATGAGTGCGACTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGCAGGGCCTTCAGTCTTaGCTCTCACCAGGGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGQGLQS*LSPGCT Trigger: AGTACACCCTGGTGAGAGCCAAGACTGAAGGCCCTG...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGTTCAAGACCTCTGAGTaGAGCATCAGGCAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGFKTSE*SIRQGL Trigger: GAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAA...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGGGACTGGCCTGTCACTaGGGTGCCATTATTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGGLACH*GAIIQL Trigger: CAGTTGAATAATGGCACCCCAGTGACAGGCCAGTCC...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCGCACTCATAACCCTCCTTCCTGGGCCGACAGCTGCCCCCATGGGCACACACTACAAATGGCCTaGTCACATCTCCATTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DSRTHNPPSWADSCPHGHTLQMA*SHLHCE Trigger: CTCACAATGGAGATGTGATCAGGCCATTTGTAGTGT...GTGCCCATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATGAGTGCGACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGTCGCACTCATAACCCTCCTTCCTGGGCCGACAGCTGCCCCCATGGGCACTTTTCCACTGGATGCTaGAAGCTGTACAGTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: DSRTHNPPSWADSCPHGHFSTGC*KLYSSR Trigger: CCTTGAACTGTACAGCTTTCAGCATCCAGTGGAAAA...GTGCCCATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATGAGTGCGACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CAA 90 bp | CCAATCACTTCCTCAGTGATTAGGGTATCCTGGCCAACCGGGACGTaGTGTGACCGCTCCCGCAGGGACTTATCTGAACCAACCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PITSSVIRVSWPTGT*CDRSRRDLSEPTSE Trigger: CTCTGAGGTTGGTTCAGATAAGTCCCTGCGGGAGCGGTCACACAACGTCCCGGTTGGCCAGGATACCCTAATCACTGAGGAAGTGATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGTACTATTTGGAGGGGTaGTCTCTCTGTCTCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGYYLEG*SLCLSV Trigger: GACAGAGAGACAGAGAGACCACCCCTCCAAATAGTA...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGCTGGTGTTACTTAGCCCCACAAGTGTTGATGTTCTTCCCATCCACGGCGGTCCCTTCTCCCAATaGCCCACCCTAGTCACTTGC | + |
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Preference number: 2 (lower is better) Translates to: GQLVLLSPTSVDVLPIHGGPFSQ*PTLVTC Trigger: GCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC...GCCGTGGATGGGAAGAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCAGGTAGCTGCGGCCGATGAACTGTGGGATCTCGATGGCTTCTATAATAGTCATAACCCTCCTTCCTaGGCCGACAGCTGCCCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: RQVAAADELWDLDGFYNSHNPPS*ADSCPH Trigger: ATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATG...ACTATTATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGCAGCTACCTGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 90 bp | TGTCCCTTGGGCAAGGTCAGCTGGTGTTACTTAGCCCCACAAGTGTaGATGTTCTTCCCATCCACGGCGTCTTCCACGAGGGAAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CPLGKVSWCYLAPQV*MFFPSTASSTREMW Trigger: CCACATTTCCCTCGTGGAAGACGCCGTGGATGGGAAGAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGACCTTGCCCAAGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGAGGCTGAGGTAGGTTGGGCGAGTCTGGAGCCCATCACTGAGTTGGAGACAGCTGCTACGCTTACTTaGTATTCAGTGCCTGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: REAEVGWASLEPITELETAATLT*YSVPGF Trigger: GAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGC...TGTCTCCAACTCAGTGATGGGCTCCAGACTCGCCCAACCTACCTCAGCCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTTCCCACACTCTTTCTGGCAGTTCAGGCCTTCGAAGCCCAAGGGACAGTCCCCTCTACCACCTTCTaGTTGTCCACCTGTAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: VVPTLFLAVQAFEAQGTVPSTTF*LSTCKI Trigger: GATCTTACAGGTGGACAAGCAGAAGGTGGTAGAGGG...GACTGTCCCTTGGGCTTCGAAGGCCTGAACTGCCAGAAAGAGTGTGGGAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 90 bp | GGACAGTGTGAAATGGGAGATGCAGCCCACAAGGCCTCGCAGGTATaGTCTGTTCGTGTGCAGAGCGATTTCCTTCATTCCACCCACGTA | + |
|
Preference number: 2 (lower is better) Translates to: GQCEMGDAAHKASQV*SVRVQSDFLHSTHV Trigger: TACGTGGGTGGAATGAAGGAAATCGCTCTGCACACGAACAGACAATACCTGCGAGGCCTTGTGGGCTGCATCTCCCATTTCACACTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCTTGCTACCGCTCCCCTaGCACTACAAATGGCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: EGQHSSHLSLSKSLWGPALLPLP*HYKWPD Trigger: ATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAA...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCCCACTGCTGCACTCCCCAACATCAGCTCCATTGAGGGCTTTTCCTAATCCCAGGCGTAGTCATTaGCACAGAAGCTGTCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: QIPLLHSPTSAPLRAFPNPRRSH*HRSCQL Trigger: CAGCTGACAGCTTCTGTGTCAATGACTACGCCTGGG...ATTAGGAAAAGCCCTCAATGGAGCTGATGTTGGGGAGTGCAGCAGTGGGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGTGAAGCCTCCCTGGCTGTTGGGGTGCTaGAGGGGGCAGGCAGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: GTPPIKMSVLHLIWVKPPWLLGC*RGQAGI Trigger: GATTCCTGCCTGCCCCCTGCAGCACCCCAACAGCCA...GGGAGGCTTCACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCCTCTTCCGTGCTCACTCTCTCCGCAGTAGAGCAGCAAGCCATCCTCCGCTTTGGTGTTTTCCACTaGATGCTGAAAGCTGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: VSSSVLTLSAVEQQAILRFGVFH*MLKAVQ Trigger: CTGTACAGCTTTCAGCATCCAGTGGAAAACACCAAA...GCGGAGGATGGCTTGCTGCTCTACTGCGGAGAGAGTGAGCACGGAAGAGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 90 bp | TACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATaGGGTTCGGTTCACAGGGCGTTAGCAGAGAAGGCCACCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YVEQQSPMLPNHSSP*GSVHRALAEKATQG Trigger: GCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTGAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATGGGTTCGGACGGTGTTaGTGGGCCAGCTGCGCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LISPLLDSIIFIHLNRQHGFGRC*WASCAD Trigger: GTCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCC...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCACGCCACTGCCCAGGTTGTAGCTGAATATCAGGGCTCCATCCCGAAGACCTTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SHATAQVVAEYQGSIPKTFGSRK*FNLLKG Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...GGTCTTCGGGATGGAGCCCTGATATTCAGCTACAACCTGGGCAGTGGCGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTTGACTCGGTGCCACCGGCCATCGCTGAAGGAACCGTTCACCATGATGGACCTCTTGAGGATATTTaGGTTGTCATACGTCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLDSVPPAIAEGTVHHDGPLEDI*VVIRQV Trigger: TACCTGACGTATGACAACCCAAATATCCTCAAGAGG...TCCATCATGGTGAACGGTTCCTTCAGCGATGGCCGGTGGCACCGAGTCAAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTACTTAGCCCCACAAGTGTTGATGTTCTTCCCATCCACGGCGTCTTCCACGTGACTTGCCTGTTCTaGCTCCGTAGTCATCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: VLLSPTSVDVLPIHGVFHVTCLF*LRSHPL Trigger: CAGTGGATGACTACGGAGCCAGAACAGGCAAGTCAC...GTGGAAGACGCCGTGGATGGGAAGAACATCAACACTTGTGGGGCTAAGTAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 90 bp | TGTCAGCTGAACAGAGAGTTTCATCACAGGACATGTCAAAGAGCCTaGACATCATGGCCACACTGTTCTTCCCCTTCCGTTGGGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CQLNREFHHRTCQRA*TSWPHCSSPSVGLV Trigger: CACCAGCCCAACGGAAGGGGAAGAACAGTGTGGCCATGATGTCAAGGCTCTTTGACATGTCCTGTGATGAAACTCTCTGTTCAGCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGTGAAGCCTCCCTTCGTGGAGAGAGGCTaGGGTAGGTTGGGCGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: GTPPIKMSVLHLIWVKPPFVERG*GRLGES Trigger: AGACTCGCCCAACCTACCTCAGCCTCTCTCCACGAA...GGGAGGCTTCACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGGCTGAGGTAGGTTGGGCGAGTCTGGAGCCCATCACTGAGTTGGAGACATCCATAGACCGAGATTaGAAGTATGAAGTTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: REAEVGWASLEPITELETSIDRD*KYEVQG Trigger: ACCCTGAACTTCATACTTCCAATCTCGGTCTATGGA...TGTCTCCAACTCAGTGATGGGCTCCAGACTCGCCCAACCTACCTCAGCCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTCATTCCACCCACGTACAGAGCACCGTTGATGTTAAGCTGCCGCATCAAGTTCCCACACTCTTTCTaGCAGTTCAGGCCTTCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFIPPTYRAPLMLSCRIKFPHSF*QFRPSK Trigger: CTTCGAAGGCCTGAACTGCCAGAAAGAGTGTGGGAA...CTTGATGCGGCAGCTTAACATCAACGGTGCTCTGTACGTGGGTGGAATGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCTCTCCAGGTCTCCAAGAAAGGGCCACTTCAGAATCGGAAACCACAAGGACACAACAGAGCCATTaGGCTACAGCAGAGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFSPGLQERATSESETTRTQQSH*ATAESS Trigger: GGAACTCTCTGCTGTAGCTCAATGGCTCTGTTGTGT...CCTTGTGGTTTCCGATTCTGAAGTGGCCCTTTCTTGGAGACCTGGAGAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTCAGGTAGCTGCGGCCGATGAACTGTGGGATCTCGATGGCTTCTATAATAGTTCCCCGAGTTCTTCTTaGCATCATCGTAATTTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RQVAAADELWDLDGFYNSSPSSS*HHRNLG Trigger: TCCCAAATTACGATGATGTCAAGAAGAACTCGGGGA...ACTATTATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGCAGCTACCTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTCTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTTTCAAGACCTCTGAGTaGAGCATCAGGCAGGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSLLNGCCTNKNRVVPETFKTSE*SIRQGL Trigger: GAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAA...AGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCTATAATAGTATTGAGGCAGTGGTTCCCACACTCTTTCTGGCAGTTCAGTTCAAGACCTCTGAGTaGAGCATCAGGCAGGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GFYNSIEAVVPTLFLAVQFKTSE*SIRQGL Trigger: GAGACCCTGCCTGATGCTGCACTCAGAGGTCTTGAA...CTGAACTGCCAGAAAGAGTGTGGGAACCACTGCCTCAATACTATTATAGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCTCCATAGACCGAGATTaGAAGTATGAAGTTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: EGQHSSHLSLSKSLWGPASIDRD*KYEVQG Trigger: ACCCTGAACTTCATACTTCCAATCTCGGTCTATGGA...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCCTCTGCCCTGAACTCCAGAGTAACCTGAAATGCCTGATAAGAGTTCTTGCTACCAGAACGCTTTaGTGTTTTCCACTGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LRLCPELQSNLKCLIRVLATRTL*CFPLDA Trigger: AGCATCCAGTGGAAAACACCAAAGCGTTCTGGTAGC...AAGAACTCTTATCAGGCATTTCAGGTTACTCTGGAGTTCAGGGCAGAGGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR CAA 90 bp | TTCTCATCCAGTCTGGCTCTCACTCTTGTTAACACAACAGAGCCATaGAGCTACAGCAGAGAGTTCCCAGAGCTTGCACTGACGTATCAT | + |
|
Preference number: 2 (lower is better) Translates to: FSSSLALTLVNTTEP*SYSREFPELALTYH Trigger: ATGATACGTCAGTGCAAGCTCTGGGAACTCTCTGCTGTAGCTCAATGGCTCTGTTGTGTTAACAAGAGTGAGAGCCAGACTGGATGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CAA 90 bp | TTCAGGCCATCTCTGTACAGTGTCACCGTATGCCAGGCCCCAAGTTaGATTTTGGTCTCACTTATGATGATGGCAATCCCAGTTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: FRPSLYSVTVCQAPS*ILVSLMMMAIPVPQ Trigger: TTGTGGAACTGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTACAGAGATGGCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCACCTTCACAAATGACTaGATGAGTTCTTCCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EGQHSSHLSLSKSLWGPATFTND*MSSSSF Trigger: GAAAGAGGAAGAACTCATTCAGTCATTTGTGAAGGT...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTAACACTGTGTAGCCAATaGTGGAGCTACCAGAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVTLCSQ*WSYQNA Trigger: AGCGTTCTGGTAGCTCCATCATTGGCTACACAGTGT...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGCCATTATTCAACTGCAGCATCCCATTCAGGCCATCTCTGTACAGTGTCAGCTTGGGGGAAGGATaGCACAGTCTGATTATTATT | + |
|
Preference number: 2 (lower is better) Translates to: GVPLFNCSIPFRPSLYSVSLGEG*HSLIII Trigger: AATAATAATCAGACTGTGGCATCCTTCCCCCAAGCT...GACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCACCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGTGAAGCCTCCCTCCCATTCTTCGCTGTaGGAGACACACGTAGGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GTPPIKMSVLHLIWVKPPSHSSL*ETHVGH Trigger: ATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGA...GGGAGGCTTCACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCCTCTGCCCTGAACTCCAGAGTAACCTGAAATGCCTGATAAGAGTTCTTGGCGCTCTTGGATTATaGTCCAGCTCTTGTCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LRLCPELQSNLKCLIRVLGALGL*SSSCQN Trigger: ATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCC...AAGAACTCTTATCAGGCATTTCAGGTTACTCTGGAGTTCAGGGCAGAGGCGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTACACAACAGAGCCATTaGGCTACAGCAGAGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NRVVPETNYRLFQELDRITQQSH*ATAESS Trigger: GGAACTCTCTGCTGTAGCTCAATGGCTCTGTTGTGT...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCTATAATAGTATTGAGGCAGTGGTTCCCACACTCTTTCTGGCAGTTCAGCCGCAGGGACTTATCTaGACCAACCTCAGAGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GFYNSIEAVVPTLFLAVQPQGLI*TNLRVK Trigger: TTTTACTCTGAGGTTGGTTCAGATAAGTCCCTGCGG...CTGAACTGCCAGAAAGAGTGTGGGAACCACTGCCTCAATACTATTATAGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAAAAAGAGAGAATATTTaGATTAGAGGAAAGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PTLVTCYRSPDTTNGLITKRENI*IRGKLG Trigger: CCCAAGCTTTCCTCTAATGCAAATATTCTCTCTTTT...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTACAGGGCCTTCAGTCTTaGCTCTCACCAGGGTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVQGLQS*LSPGCT Trigger: AGTACACCCTGGTGAGAGCCAAGACTGAAGGCCCTG...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CAA 90 bp | CCATCTCTGTACAGTGTCACCGTATGCCAGGCCCCAAGTTTGATTTaGGTCTCACTTATGATGATGGCAATCCCAGTTCCACAATTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSLYSVTVCQAPSLI*VSLMMMAIPVPQLN Trigger: GTTTAATTGTGGAACTGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTACAGAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTCAGGGCCTTCAGTCTTaGCTCTCACCAGGGTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFQGLQS*LSPGCT Trigger: AGTACACCCTGGTGAGAGCCAAGACTGAAGGCCCTG...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGTGAAGCCTCCCAGAGTAGGACTGAATTaGGGCACTTCCTTCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GTPPIKMSVLHLIWVKPPRVGLN*GTSFIL Trigger: GAGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCT...GGGAGGCTTCACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 90 bp | ACAGAAGTCTTCTTGGACTCCACTGAGAACTTCTTATTCCCAACTTaGGTAGCAGGAAGTGGTTTAACCTCCTCAAAGGATACATCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TEVFLDSTENFLFPT*VAGSGLTSSKDTSR Trigger: CCTGGATGTATCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAAGTTGGGAATAAGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATACACTACAAATGGCCTaGTCACATCTCCATTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NKNRVVPETNYRLFQELDTLQMA*SHLHCE Trigger: CTCACAATGGAGATGTGATCAGGCCATTTGTAGTGT...ATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCTCTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAGCTTGGGGGAAGGATaGCACAGTCTGATTATTATT | + |
|
Preference number: 2 (lower is better) Translates to: KSLLNGCCTNKNRVVPETSLGEG*HSLIII Trigger: AATAATAATCAGACTGTGGCATCCTTCCCCCAAGCT...AGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATTACTATTTGGAGGGGTaGTCTCTCTGTCTCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLNGCCTNKNRVVPETNYYYLEG*SLCLSV Trigger: GACAGAGAGACAGAGAGACCACCCCTCCAAATAGTA...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCAGGCCCCAAGTTTGATTTTGGTCTCACTTATGATGATGGCAATCCCAGTAGACAGAAGTCTTCTTaGACTCCACTGAGAACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: MPGPKFDFGLTYDDGNPSRQKSS*TPLRTS Trigger: AGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCT...ACTGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTACACAACAGAGCCATTaGGCTACAGCAGAGAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFTQQSH*ATAESS Trigger: GGAACTCTCTGCTGTAGCTCAATGGCTCTGTTGTGT...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCAGGCCCCAAGTTTGATTTTGGTCTCACTTATGATGATGGCAATCCCAGTTTACTTGATATTCAGTaGCTGGCTTCAAATCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: MPGPKFDFGLTYDDGNPSLLDIQ*LASNLQ Trigger: TTGGAGATTTGAAGCCAGGCACTGAATATCAAGTAA...ACTGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATATTTTAATACTATTTaGAGGGGTGGTCTCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVYFNTI*RGGLSV Trigger: GACAGAGAGACCACCCCTCCAAATAGTATTAAAATA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTCCATAGACCGAGATTaGAAGTATGAAGTTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LISPLLDSIIFIHLNRQHSIDRD*KYEVQG Trigger: ACCCTGAACTTCATACTTCCAATCTCGGTCTATGGA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATCTGGTAGTTGGTATCTaGATCAAGGCCTTTGATAAC | + |
|
Preference number: 2 (lower is better) Translates to: LISPLLDSIIFIHLNRQHLVVGI*IKAFDN Trigger: GTTATCAAAGGCCTTGATCCAGATACCAACTACCAG...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTATTTTAATACTATTTaGAGGGGTGGTCTCTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LISPLLDSIIFIHLNRQHYFNTI*RGGLSV Trigger: GACAGAGAGACCACCCCTCCAAATAGTATTAAAATA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | CACAGCCTTGGAAGCCACGGTTTGTCCCTGTTGCTCTaGCCAGCCAGTAAGCACTGGGAGCGCCCCCGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HSLGSHGLSLLL*PASKHWERPRG Trigger: ACCTCGGGGGCGCTCCCAGTGCTTACTGGCTGGTCAGAGCAACAGGGACAAACCGTGGCTTCCAAGGCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | CTGCACACAGCCTTGGAAGCCACGGTTTGTCCCTGTTaGTCTGACCAGCCAGTAAGCACTGGGAGCGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHTALEATVCPC*SDQPVSTGSAP Trigger: GGGGGCGCTCCCAGTGCTTACTGGCTGGTCAGAGCAACAGGGACAAACCGTGGCTTCCAAGGCTGTGTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | TGGGCTGGTGTGGGTGGGATGGCCACTGTAGTTTCGTaGAGAGAGGCTGAGGTAGGTTGGGCGAGTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WAGVGGMATVVS*REAEVGWASLE Trigger: CTCCAGACTCGCCCAACCTACCTCAGCCTCTCTCCACGAAACTACAGTGGCCATCCCACCCACACCAGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTCCCATCCACGGCGTCTTCCACGAGGGAAATGTGGTAATCGGTGGACAAGGGTTCGGACGGTGTaGCTGGGCCAGCTGCGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: CSSHPRRLPRGKCGNRWTRVRTV*LGQLRG Trigger: TCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCCT...TGTCCACCGATTACCACATTTCCCTCGTGGAAGACGCCGTGGATGGGAAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | ACCCTTCTCTGTCGGACCCAGATCCTCAGACCCTGCTaGGGACATGGCCCTAGGTCCCACACAACATCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLCRTQILRPC*GHGPRSHTTSD Trigger: GTCGGATGTTGTGTGGGACCTAGGGCCATGTCCTCAGCAGGGTCTGAGGATCTGGGTCCGACAGAGAAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR TCA 72 bp | GGGTTCGGACGGTGTTGCTGGGCCAGCTGCGCGGACTaGAGCCGTGAGCATTCATGGCTTTCACAGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GFGRCCWASCAD*SREHSWLSQQT Trigger: AGTTTGCTGTGAAAGCCATGAATGCTCACGGCTTCAGTCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | GTGCAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTaGAGGATAGAGGCTATGTCCCTTGGGCAAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VQHQAGSPGLCD*RIEAMSLGQGQ Trigger: CTGACCTTGCCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTCGCACTCATAACCCTCCTTCCTGGGCCGACAGCTGCCCCCATGGGCACCCAACATCAGCTCCATaGAGGGCTTTTCCTAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: DSRTHNPPSWADSCPHGHPTSAP*RAFPNG Trigger: GCCATTAGGAAAAGCCCTCAATGGAGCTGATGTTGG...GTGCCCATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATGAGTGCGACTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | AGTCGAAGCGGAATTCCACGTGGCCCGCAGCCATATTaGTGGAGAGGAAGTCCTTGCTGCCCGTGTCGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRSGIPRGPQPY*WRGSPCCPCRS Trigger: GCTACGACACGGGCAGCAAGGACTTCCTCTCCATCAATATGGCTGCGGGCCACGTGGAATTCCGCTTCGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | ATCCCATTCTTCGCTGTGCGAGACACACGTAGGTCATaGCATTGGCCTAGGGTGAGGGGAGCCTCACTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPFFAVRDTRRS*HWPRVRGASLL Trigger: CAGGAGTGAGGCTCCCCTCACCCTAGGCCAATGGCATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | CATCATGGCCACACTGTTCTTCCCCTTCCGTTGGGCTaGTGTGGGTGGGATGGCCACTGTAGTTTCGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HHGHTVLPLPLG*CGWDGHCSFVE Trigger: CTCCACGAAACTACAGTGGCCATCCCACCCACACCAGCCCAACGGAAGGGGAAGAACAGTGTGGCCATGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTGGCTGCTACGCTTACTaGATATTCAGTGCCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTGCYAY*IFSAWL Trigger: AAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCC...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACGCCACTGCCCAGGTTGTAGCTGAATATCAGGGCTCCATCCCGAAGACCGGGCAGGCAGGAATCTaGAGACAAAGTGGTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: SHATAQVVAEYQGSIPKTGQAGI*RQSGHM Trigger: CATGTGACCACTTTGTCTCAAGATTCCTGCCTGCCC...GGTCTTCGGGATGGAGCCCTGATATTCAGCTACAACCTGGGCAGTGGCGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | GCCAGGGTGTGGCAGCATAGGACCTCAGCGACTCTCTaGACTGAGGGATGGTCAGGGCAAAAGCATCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ARVWQHRTSATL*TEGWSGQKHLH Trigger: GTGAAGATGCTTTTGCCCTGACCATCCCTCAGTTCAGAGAGTCGCTGAGGTCCTATGCTGCCACACCCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | TTCTTCGCTGTGCGAGACACACGTAGGTCATGCCATTaGCCTAGGGTGAGGGGAGCCTCACTCCTGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: FFAVRDTRRSCH*PRVRGASLLRT Trigger: AGTTCTCAGGAGTGAGGCTCCCCTCACCCTAGGCCAATGGCATGACCTACGTGTGTCTCGCACAGCGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTGTCTGGCTCTCACTCTaGTTAACACAACAGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTVWLSL*LTQQSH Trigger: ATGGCTCTGTTGTGTTAACAAGAGTGAGAGCCAGAC...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | AGCACCGTTGATGTTAAGCTGCCGCATCAAGCCCGGTaGCTTGCCTGTTCTGGCTCCGTAGTCATCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: STVDVKLPHQAR*LACSGSVVIHC Trigger: ACAGTGGATGACTACGGAGCCAGAACAGGCAAGTCACCGGGCTTGATGCGGCAGCTTAACATCAACGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | CTTCCACGAGGGAAATGTGGTAATCGGTGGACAGTGTaGAATGGGAGATGCAGCCCACAAGGCCTCGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPRGKCGNRWTV*NGRCSPQGLAG Trigger: ACCTGCGAGGCCTTGTGGGCTGCATCTCCCATTTCACACTGTCCACCGATTACCACATTTCCCTCGTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | AATGGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTaGTACCGCTCCCCTGACACTACAAATGGCCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: NGPFSQWPTLVT*YRSPDTTNGLI Trigger: GATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | ATTCCACCCACGTACAGAGCACCGTTGATGTTAAGCTaGCGCATCAAGCCCGGTGACTTGCCTGTTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IPPTYRAPLMLS*RIKPGDLPVLA Trigger: AGCCAGAACAGGCAAGTCACCGGGCTTGATGCGGCAGCTTAACATCAACGGTGCTCTGTACGTGGGTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | AAATCTCCAATCACTTCCTCAGTGATTAGGGTATCCTaGCCAACCGGGACGTTGTGTGACCGCTCCCGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPITSSVIRVS*PTGTLCDRSRR Trigger: CCTGCGGGAGCGGTCACACAACGTCCCGGTTGGCCAGGATACCCTAATCACTGAGGAAGTGATTGGAGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | TGGGACTGGCCTGTCACTGGGGTGCCATTATTCAACTaGAGCATCCCATTCAGGCCATCTCTGTACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WDWPVTGVPLFN*SIPFRPSLYSV Trigger: GACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCACCCCAGTGACAGGCCAGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | TACTGTACTGACCCTGGGACTGGCCTGTCACTGGGGTaGCATTATTCAACTGCAGCATCCCATTCAGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: YCTDPGTGLSLG*HYSTAASHSGH Trigger: ATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCACCCCAGTGACAGGCCAGTCCCAGGGTCAGTACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | TCTGCTTGTCCACCTGTAAGATCCCATTCTTCGCTGTaGGAGACACACGTAGGTCATGCCATTGGCCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SACPPVRSHSSL*ETHVGHAIGLG Trigger: CCCTAGGCCAATGGCATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGATCTTACAGGTGGACAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | CAGCCCACAAGGCCTCGCAGGTATTGTCTGTTCGTGTaGAGAGCGATTTCCTTCATTCCACCCACGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QPTRPRRYCLFV*RAISFIPPTYR Trigger: TCTGTACGTGGGTGGAATGAAGGAAATCGCTCTGCACACGAACAGACAATACCTGCGAGGCCTTGTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTTCCCACACTCTTTCTGGCAGTTCAGGCCTTCGAAGCCCAAGGGACAGTCGAGACAGAAGTCTTCTaGGACTCCACTGAGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVPTLFLAVQAFEAQGTVETEVF*DSTENF Trigger: GAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTC...GACTGTCCCTTGGGCTTCGAAGGCCTGAACTGCCAGAAAGAGTGTGGGAACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAGCTGGTGTTACTTAGCCCCACAAGTGTTGATGTTCTTCCCATCCACGGCACGTACAGAGCACCGTaGATGTTAAGCTGCCGCATC | + |
|
Preference number: 3 (lower is better) Translates to: GQLVLLSPTSVDVLPIHGTYRAP*MLSCRI Trigger: GATGCGGCAGCTTAACATCAACGGTGCTCTGTACGT...GCCGTGGATGGGAAGAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | GCTGCGTTCTCCACATTCACGCCCGATGTAAAGTCATaGTTCACATGGATGGTCCGGTCGTTGAGGATGATC | + |
|
Preference number: 3 (lower is better) Translates to: AAFSTFTPDVKS*FTWMVRSLRMI Trigger: GATCATCCTCAACGACCGGACCATCCATGTGAAGCATGACTTTACATCGGGCGTGAATGTGGAGAACGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | GTCGTAGCTGTACAAAAGGACACCATCCCCCGAGTCTaGCCGAAAGGTGATCTCGAACTCGGTGAAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVAVQKDTIPRV*PKGDLELGERK Trigger: CTTTCTTTCACCGAGTTCGAGATCACCTTTCGGCCAGACTCGGGGGATGGTGTCCTTTTGTACAGCTACGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACTCCACCAATAAAAATGTCCGTATTACACTTAATCTGGGTGAAGCCTCCCGTTCTTCCCCTTCCGTaGGGCTGGTGTGGGTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GTPPIKMSVLHLIWVKPPVLPLP*GWCGWD Trigger: ATCCCACCCACACCAGCCCAACGGAAGGGGAAGAAC...GGGAGGCTTCACCCAGATTAAGTGTAATACGGACATTTTTATTGGTGGAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTCCCATCCACGGCGTCTTCCACGAGGGAAATGTGGTAATCGGTGGACAGTCTGGCTCTCACTCTaGTTAACACAACAGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSSHPRRLPRGKCGNRWTVWLSL*LTQQSH Trigger: ATGGCTCTGTTGTGTTAACAAGAGTGAGAGCCAGAC...TGTCCACCGATTACCACATTTCCCTCGTGGAAGACGCCGTGGATGGGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCGCCTCTGCCCTGAACTCCAGAGTAACCTGAAATGCCTGATAAGAGTTCTTGCATTAGAGGAAAGCTaGGGGGAAGGATGCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LRLCPELQSNLKCLIRVLALEES*GEGCHS Trigger: ACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAATGC...AAGAACTCTTATCAGGCATTTCAGGTTACTCTGGAGTTCAGGGCAGAGGCGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGTTAATCTCTCCACTTTaGGACAGCATCATATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGLISPL*DSIIFI Trigger: GATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAATTAAACCTGAAGTGGAGGGACCGCCGGATGAGAGCCAGGGACATGAATCTGGATCAAGGCCTTaGATAACCATGGAGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: STIKPEVEGPPDESQGHESGSRP*ITMESI Trigger: GATGGACTCCATGGTTATCAAAGGCCTTGATCCAGA...TTCATGTCCCTGGCTCTCATCCGGCGGTCCCTCCACTTCAGGTTTAATTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTCCCATCCACGGCGTCTTCCACGAGGGAAATGTGGTAATCGGTGGACAGATCCAGACACCCTCTaGAGGATATTTGGGTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSSHPRRLPRGKCGNRWTDPDTL*RIFGLS Trigger: TGACAACCCAAATATCCTCAAGAGGGTGTCTGGATC...TGTCCACCGATTACCACATTTCCCTCGTGGAAGACGCCGTGGATGGGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | TTCACATGGATGGTCCGGTCGTTGAGGATGATCTTCTaGATGCTCCCACTAAATGGATGGAGGATCCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FTWMVRSLRMIF*MLPLNGWRIPE Trigger: CTCGGGGATCCTCCATCCATTTAGTGGGAGCATTCAGAAGATCATCCTCAACGACCGGACCATCCATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | GAAGCTAAGCCTCCCCTTGCCAGTCTGACTGTAGGCTaGTACGCTTACTTGATATTCAGTGCCTGGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EAKPPLASLTVG*YAYLIFSAWLQ Trigger: TTGAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCCTACAGTCAGACTGGCAAGGGGAGGCTTAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | TTCTTCCCATTAACAGAAAGTGACTGCACACAGCCTTaGAAGCCACGGTTTGTCCCTGTTGCTCTGACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FFPLTESDCTQP*KPRFVPVALTS Trigger: GCTGGTCAGAGCAACAGGGACAAACCGTGGCTTCCAAGGCTGTGTGCAGTCACTTTCTGTTAATGGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACGCCACTGCCCAGGTTGTAGCTGAATATCAGGGCTCCATCCCGAAGACCATCATATTCATCCACTaGAACCGTCAGCATATACTA | + |
|
Preference number: 3 (lower is better) Translates to: SHATAQVVAEYQGSIPKTIIFIH*NRQHIL Trigger: TAGTATATGCTGACGGTTCAAGTGGATGAATATGAT...GGTCTTCGGGATGGAGCCCTGATATTCAGCTACAACCTGGGCAGTGGCGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCATTATTCAACTGCAGCATCCCATTCAGGCCATCTCTGTACAGTGTCACCGAGCCCATCACTGAGTaGGAGACAGAAGTCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VPLFNCSIPFRPSLYSVTEPITE*ETEVFL Trigger: CAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTC...GGTGACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | CCCCCAGGCGTAGTCATTGACACAGAAGCTGTCAGCTaGACAGAGAGTTTCATCACAGGACATGTCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PPGVVIDTEAVS*TESFITGHVKE Trigger: CTCTTTGACATGTCCTGTGATGAAACTCTCTGTTCAGCTGACAGCTTCTGTGTCAATGACTACGCCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | TCTGGATCAAGGCCTTTGATAACCATGGAGTCCATCTaGAGGCGCTCTTGGATTATGGTCCAGCTCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SGSRPLITMESI*RRSWIMVQLLS Trigger: TGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | CTCCGCCTCTGCCCTGAACTCCAGAGTAACCTGAAATaGCTGATAAGAGTTCTTCAGAGGCTCAAAGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRLCPELQSNLK*LIRVLQRLKGY Trigger: GTAACCTTTGAGCCTCTGAAGAACTCTTATCAGGCATTTCAGGTTACTCTGGAGTTCAGGGCAGAGGCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | TCATGTGTATGCATAGCACAGGGCACAGCTGAACCATaGTACAGAAGAAGAAAGCACCCTTCTCTGTCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCVCIAQGTAEP*YRRRKHPSLSD Trigger: GTCCGACAGAGAAGGGTGCTTTCTTCTTCTGTACCATGGTTCAGCTGTGCCCTGTGCTATGCATACACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR CCA 72 bp | ATGATGGAGCTACCAGAACGCTTTGGTGTTTTCCACTaGATGCTGAAAGCTGTACAGTTCAAGGCTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MMELPERFGVFH*MLKAVQFKAPS Trigger: GCTGGGAGCCTTGAACTGTACAGCTTTCAGCATCCAGTGGAAAACACCAAAGCGTTCTGGTAGCTCCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | GGGATCTCGATGGCTTCTATAATAGTATTGAGGCAGTaGTTCCCACACTCTTTCTGGCAGTTCAGGCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: GISMASIIVLRQ*FPHSFWQFRPS Trigger: CGAAGGCCTGAACTGCCAGAAAGAGTGTGGGAACCACTGCCTCAATACTATTATAGAAGCCATCGAGATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCATTATTCAACTGCAGCATCCCATTCAGGCCATCTCTGTACAGTGTCACCCAGAGTAGGACTGAATaGGGGCACTTCCTTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: VPLFNCSIPFRPSLYSVTQSRTE*GHFLHS Trigger: AGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCTG...GGTGACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | TCTGCAGTCATGTGTATGCATAGCACAGGGCACAGCTaGACCATGGTACAGAAGAAGAAAGCACCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAVMCMHSTGHS*TMVQKKKAPFS Trigger: AGAGAAGGGTGCTTTCTTCTTCTGTACCATGGTTCAGCTGTGCCCTGTGCTATGCATACACATGACTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR TCA 72 bp | ACAGAGAGTTTCATCACAGGACATGTCAAAGAGCCTTaGCATCATGGCCACACTGTTCTTCCCCTTCCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TESFITGHVKEP*HHGHTVLPLPL Trigger: CAACGGAAGGGGAAGAACAGTGTGGCCATGATGTCAAGGCTCTTTGACATGTCCTGTGATGAAACTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | ATCCCATTCAGGCCATCTCTGTACAGTGTCACCGTATaGCAGGCCCCAAGTTTGATTTTGGTCTCACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: IPFRPSLYSVTV*QAPSLILVSLM Trigger: CATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTACAGAGATGGCCTGAATGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | GTTGTCATACGTCAGGTAGCTGCGGCCGATGAACTGTaGGATCTCGATGGCTTCTATAATAGTATTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVIRQVAAADEL*DLDGFYNSIEA Trigger: TGCCTCAATACTATTATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGCAGCTACCTGACGTATGACAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGCATTAGAGGAAAGCTaGGGGGAAGGATGCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: HPLEPSAYTKREWSLLPMALEES*GEGCHS Trigger: ACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAATGC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGCCATTATTCAACTGCAGCATCCCATTCAGGCCATCTCTGTACAGTGTCTTCTTATTCCCAACTTaGGTAGCAGGAAGTGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GVPLFNCSIPFRPSLYSVFLFPT*VAGSGL Trigger: TAAACCACTTCCTGCTACCAAAGTTGGGAATAAGAA...GACACTGTACAGAGATGGCCTGAATGGGATGCTGCAGTTGAATAATGGCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | ATCCTTGGCGGTTGTCTTAAACCTCATGAACGCATTTaGCCTCGATCCAGACACCCTCTTGAGGATATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ILGGCLKPHERI*PRSRHPLEDIW Trigger: CCAAATATCCTCAAGAGGGTGTCTGGATCGAGGTCAAATGCGTTCATGAGGTTTAAGACAACCGCCAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | TGGAGCCCATCACTGAGTTGGAGACAGAAGTCTTCTTaGACTCCACTGAGAACTTCTTATTCCCAACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WSPSLSWRQKSS*TPLRTSYSQLW Trigger: CCAAAGTTGGGAATAAGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGTCTGGCTCTCACTCTaGTTAACACAACAGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HPLEPSAYTKREWSLLPMVWLSL*LTQQSH Trigger: ATGGCTCTGTTGTGTTAACAAGAGTGAGAGCCAGAC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | CTGAACCAACCTCAGAGTAAAACACTGTGTAGCCAATaGTGGAGCTACCAGAACGCTTTGGTGTTTTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LNQPQSKTLCSQ*WSYQNALVFST Trigger: AGTGGAAAACACCAAAGCGTTCTGGTAGCTCCATCATTGGCTACACAGTGTTTTACTCTGAGGTTGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR TCA 72 bp | TTAATCTACACAATCCATAGACCGAGATTGGAAGTATaGAGTTCAGGGTTGCCCAGTCTTCCTGCTAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LIYTIHRPRLEV*SSGLPSLPASV Trigger: GACACTAGCAGGAAGACTGGGCAACCCTGAACTTCATACTTCCAATCTCGGTCTATGGATTGTGTAGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR CCA 72 bp | ATTCATGGCTTTCACAGCAAACTGGTAGTTGGTATCTaGATCAAGGCCTTTGATAACCATGGAGTCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: IHGFHSKLVVGI*IKAFDNHGVHL Trigger: CAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAGATACCAACTACCAGTTTGCTGTGAAAGCCATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCTCTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTATCATATTCATCCACTaGAACCGTCAGCATATACTA | + |
|
Preference number: 3 (lower is better) Translates to: KSLLNGCCTNKNRVVPETIIFIH*NRQHIL Trigger: TAGTATATGCTGACGGTTCAAGTGGATGAATATGAT...AGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR CCA 72 bp | GAGGATCCCCGAGTTCTTCTTGACATCATCGTAATTTaGGACTCCACCAATAAAAATGTCCGTATTACACTT | + |
|
Preference number: 3 (lower is better) Translates to: EDPRVLLDIIVI*DSTNKNVRITL Trigger: AAGTGTAATACGGACATTTTTATTGGTGGAGTCCCAAATTACGATGATGTCAAGAAGAACTCGGGGATCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR GCA 72 bp | TCTGGTTTATTTAGCCATCTCTTAGACGTCTTAATATaGCTAAAAACTGTGCTCTGCACAAAGCTCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGLFSHLLDVLI*LKTVLCTKLKS Trigger: AGACTTGAGCTTTGTGCAGAGCACAGTTTTTAGGCATATTAAGACGTCTAAGAGATGGCTAAATAAACCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTGCGCAGGTGCCCCCGTaGATGCAGGAGGCTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTAQVPP*MQEASS Trigger: TGACGAAGCCTCCTGCATCCACGGGGGCACCTGCGC...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACATCCTGGGCCGACAGCTaGCCCCATGGGCACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITSWADS*PHGHRG Trigger: CCCCCTGTGCCCATGGGGGCAGCTGTCGGCCCAGGA...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCAAGGTGCCCCCGTGGATaGAGGAGGCTTCGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPRCPRG*RRLRHR Trigger: TCTGTGACGAAGCCTCCTGCATCCACGGGGGCACCT...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGGCCCCTACACAGGGGTaGGCTGCGTTCTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGAPTQG*AAFSTF Trigger: GAATGTGGAGAACGCAGCCCACCCCTGTGTAGGGGC...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCGGTAGCTGCGGCCGATaGACTGTGGGATCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSGSCGR*TVGSRW Trigger: CCATCGAGATCCCACAGTTCATCGGCCGCAGCTACC...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCATACACAGGGGTGGGCTaGGTTCTCCACATTCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPYTGVG*VLHIHA Trigger: GGCGTGAATGTGGAGAACGCAGCCCACCCCTGTGTA...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCATTGTCCCTGTTGCTCTaGCCAGCCAGTAAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPLSLLL*PASKHW Trigger: CCAGTGCTTACTGGCTGGTCAGAGCAACAGGGACAA...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCGGCCCGCAGCCATATTaGTGGAGAGGAAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSGPQPY*WRGSPC Trigger: GCAAGGACTTCCTCTCCATCAATATGGCTGCGGGCC...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGGGGAGCCTCACTCCTaGGAACTCCCGTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITGEPHS*ELPSQN Trigger: GTTCTGGGACGGGAGTTCTCAGGAGTGAGGCTCCCC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACACGCCGGGTGGGAGGCTaGAGGCCAGGAGCAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITRRVGG*RPGARN Trigger: ATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCG...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| CDS-3UTR GCA 90 bp | AGATATCTTCTGAGCAGGCCTCGCCTCCTTTGCCCAGGTTGCAATGGCATCGTGCGCCGGGTGGGAGGCTaGAGGCCAGGAGCAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RYLLSRPRLLCPGCNGIVRRVGG*RPGARN Trigger: ATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCG...CACGATGCCATTGCAACCTGGGCAAAGGAGGCGAGGCCTGCTCAGAAGATATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACATGGCTGTTGGGGTGCTaGAGGGGGCAGGCAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITWLLGC*RGQAGI Trigger: GATTCCTGCCTGCCCCCTGCAGCACCCCAACAGCCA...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTGGTGAAGCCTCCCTCTaGCATTCCCTCTACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTGEASL*HSLYHL Trigger: AAGGTGGTAGAGGGAATGGCAGAGGGAGGCTTCACC...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTCCGTTGATGTTAAGCTaGCGCATCAAGCCCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTPLMLS*RIKPGD Trigger: GTCACCGGGCTTGATGCGGCAGCTTAACATCAACGG...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCGGGGAGCCTCACTCCTaGGAACTCCCGTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGQHSSHLSLSKSLWGPAGEPHS*ELPSQN Trigger: GTTCTGGGACGGGAGTTCTCAGGAGTGAGGCTCCCC...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCAGTGACTTGCCTGTTCTaGCTCCGTAGTCATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPVTCLF*LRSHPL Trigger: CAGTGGATGACTACGGAGCCAGAACAGGCAAGTCAC...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGGTGGACAGTGTGAAATaGGAGATGCAGCCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGVDSVK*EMQPTR Trigger: CCTTGTGGGCTGCATCTCCCATTTCACACTGTCCAC...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACACTGTGTAGCCAATaGTGGAGCTACCAGAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTTLCSQ*WSYQNA Trigger: AGCGTTCTGGTAGCTCCATCATTGGCTACACAGTGT...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCACGGTTTGTCCCTGTTaGTCTGACCAGCCAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSTVCPC*SDQPVS Trigger: GCTTACTGGCTGGTCAGAGCAACAGGGACAAACCGT...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCGCGGCCGATGAACTGTaGGATCTCGATGGCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSAADEL*DLDGFY Trigger: ATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGC...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCTCTGGAGCCCATCACTaGGTTGGAGACAGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSSGAHH*VGDRSL Trigger: AAGACTTCTGTCTCCAACTCAGTGATGGGCTCCAGA...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGGTGAAGCCTCCCTCTaGCATTCCCTCTACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITGEASL*HSLYHL Trigger: AAGGTGGTAGAGGGAATGGCAGAGGGAGGCTTCACC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCCCGATGTAAAGTCATaGTTCACATGGATGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSPDVKS*FTWMVR Trigger: CCGGACCATCCATGTGAAGCATGACTTTACATCGGG...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCAAATGCTCCCACTAAATaGATGGAGGATCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPNAPTK*MEDPRV Trigger: AACTCGGGGATCCTCCATCCATTTAGTGGGAGCATT...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCAAGTCATGCTTCACATaGATGGTCCGGTCGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSKSCFT*MVRSLR Trigger: CCTCAACGACCGGACCATCCATGTGAAGCATGACTT...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| 3UTR CAA 72 bp | GGCAAGGTCAGCTGGTGTTACTTAGCCCCACAAGTGTaGATGTTCTTCCCATCCACGGCGTCTTCCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVSWCYLAPQV*MFFPSTASSTR Trigger: CCTCGTGGAAGACGCCGTGGATGGGAAGAACATCAACACTTGTGGGGCTAAGTAACACCAGCTGACCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGAATAAAGATATCTTCTaGGCAGGCCTCGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGNKDIF*AGLASF Trigger: AAAGGAGGCGAGGCCTGCTCAGAAGATATCTTTATT...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCGGGTTCGGACGGTGTTaGTGGGCCAGCTGCGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFGFGRC*WASCAD Trigger: GTCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCC...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTCAGCAAACTGGTAGTTaGTATCTGGATCAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTQQTGS*YLDQGL Trigger: AAGGCCTTGATCCAGATACCAACTACCAGTTTGCTG...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGCAGCAAACTGGTAGTTaGTATCTGGATCAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGQQTGS*YLDQGL Trigger: AAGGCCTTGATCCAGATACCAACTACCAGTTTGCTG...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGGACTGGCCTGTCACTaGGGTGCCATTATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITGLACH*GAIIQL Trigger: CAGTTGAATAATGGCACCCCAGTGACAGGCCAGTCC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTAGCGCAGGTGCCCCCGTaGATGCAGGAGGCTTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVAQVPP*MQEASS Trigger: TGACGAAGCCTCCTGCATCCACGGGGGCACCTGCGC...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGCGGCCGATGAACTGTaGGATCTCGATGGCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITAADEL*DLDGFY Trigger: ATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCAATAGTATTGAGGCAGTaGTTCCCACACTCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRALAEKATQGLQSWLSPIVLRQ*FPHSFW Trigger: CCAGAAAGAGTGTGGGAACCACTGCCTCAATACTAT...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096494.5 |
||
| 3UTR CAA 72 bp | GAGGTAGGTTGGGCGAGTCTGGAGCCCATCACTGAGTaGGAGACAGAAGTCTTCTTGGACTCCACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVGWASLEPITE*ETEVFLDSTEN Trigger: GTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTCCAGACTCGCCCAACCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 72 bp | GCGATTTCCTTCATTCCACCCACGTACAGAGCACCGTaGATGTTAAGCTGCCGCATCAAGCCCGGTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AISFIPPTYRAP*MLSCRIKPGDL Trigger: CAAGTCACCGGGCTTGATGCGGCAGCTTAACATCAACGGTGCTCTGTACGTGGGTGGAATGAAGGAAATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTTGTAGGAGTCGGCCTTaGTGGCTGCGCAGGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRICRSRP*WLRRCP Trigger: GGGGCACCTGCGCAGCCATCAAGGCCGACTCCTACA...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTTTGAGGATGATCTTCTaGATGCTCCCACTAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTLRMIF*MLPLNG Trigger: TCCATTTAGTGGGAGCATTCAGAAGATCATCCTCAA...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACACCCTCTACCACCTTCTaGTTGTCCACCTGTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITPSTTF*LSTCKI Trigger: GATCTTACAGGTGGACAAGCAGAAGGTGGTAGAGGG...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CCA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTTTTGGTGTTTTCCACTaGATGCTGAAAGCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTFGVFH*MLKAVQ Trigger: CTGTACAGCTTTCAGCATCCAGTGGAAAACACCAAA...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| 3UTR CAA 72 bp | GAAATGGGAGATGCAGCCCACAAGGCCTCGCAGGTATaGTCTGTTCGTGTGCAGAGCGATTTCCTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMGDAAHKASQV*SVRVQSDFLHS Trigger: GGAATGAAGGAAATCGCTCTGCACACGAACAGACAATACCTGCGAGGCCTTGTGGGCTGCATCTCCCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCAGGGCTGCTACGCTTACTTaGTATTCAGTGCCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQHSSHLSLSKSLWGPARAATLT*YSVPGF Trigger: GAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGC...CCTGGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTCCGCATCAAGCCCGGTaGCTTGCCTGTTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRIPHQAR*LACSGS Trigger: GGAGCCAGAACAGGCAAGTCACCGGGCTTGATGCGG...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR TCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCCCGCATCAAGCCCGGTaGCTTGCCTGTTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFPHQAR*LACSGS Trigger: GGAGCCAGAACAGGCAAGTCACCGGGCTTGATGCGG...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTTCCTGGGCCGACAGCTaGCCCCATGGGCACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFSWADS*PHGHRG Trigger: CCCCCTGTGCCCATGGGGGCAGCTGTCGGCCCAGGA...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGTATTACACTTAATCTaGGTGAAGCCTCCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITVLHLI*VKPPSA Trigger: GGCAGAGGGAGGCTTCACCCAGATTAAGTGTAATAC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCAAGTCATGCTTCACATaGATGGTCCGGTCGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGQHSSHLSLSKSLWGPAKSCFT*MVRSLR Trigger: CCTCAACGACCGGACCATCCATGTGAAGCATGACTT...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR TCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACATTTTCCACTGGATGCTaGAAGCTGTACAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITFSTGC*KLYSSR Trigger: CCTTGAACTGTACAGCTTTCAGCATCCAGTGGAAAA...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATTCGTGGAGAGAGGCTaGGGTAGGTTGGGCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVFVERG*GRLGES Trigger: AGACTCGCCCAACCTACCTCAGCCTCTCTCCACGAA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAACAGAAGCTGTCAGCTaGACAGAGAGTTTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITTEAVS*TESFIT Trigger: TGTGATGAAACTCTCTGTTCAGCTGACAGCTTCTGT...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR TCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTGTAGGAGTCGGCCTTaGTGGCTGCGCAGGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHCRSRP*WLRRCP Trigger: GGGGCACCTGCGCAGCCATCAAGGCCGACTCCTACA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR TCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTCACAGTGTCGACCTCTaGACCCAAGGGGACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRIHSVDL*TQGDRG Trigger: GCCTCTGTCCCCTTGGGTTCAGAGGTCGACACTGTG...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR GCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATGGCTGTTGGGGTGCTaGAGGGGGCAGGCAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPWLLGC*RGQAGI Trigger: GATTCCTGCCTGCCCCCTGCAGCACCCCAACAGCCA...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATACACAGGGGTGGGCTaGGTTCTCCACATTCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVYTGVG*VLHIHA Trigger: GGCGTGAATGTGGAGAACGCAGCCCACCCCTGTGTA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CCA 90 bp | GGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCAGGGCTACCAGAACGCTTTaGTGTTTTCCACTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQHSSHLSLSKSLWGPARATRTL*CFPLDA Trigger: AGCATCCAGTGGAAAACACCAAAGCGTTCTGGTAGC...CCTGGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR CCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTGCCCCTACACAGGGGTaGGCTGCGTTCTCCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRIAPTQG*AAFSTF Trigger: GAATGTGGAGAACGCAGCCCACCCCTGTGTAGGGGC...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR CCA 90 bp | AACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCATAACCCTCCTTCCTaGGCCGACAGCTGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKNRVVPETNYRLFQELDHNPPS*ADSCPH Trigger: ATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATG...ATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR CCA 90 bp | TTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCAGGGAGCCAGCTGTCTGCAGTCCCTCTTGAGGATATTTaGGTTGTCATACGTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVSPCGDQPGSQLSAVPLEDI*VVIRQV Trigger: TACCTGACGTATGACAACCCAAATATCCTCAAGAGG...GACTGCAGACAGCTGGCTCCCTGGCTGGTCCCCACAAGGACTTACTAAGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR CAA 72 bp | CAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATaGGGTTCGGTTCACAGGGCGTTAGCAGAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQSPMLPNHSSP*GSVHRALAEKA Trigger: GGCCTTCTCTGCTAACGCCCTGTGAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| 3UTR CAA 72 bp | AGGTCCCACACAACATCCGACTCTCTAGTAACCTTGTaGTCCCTTTGCAGATGTGGCCTCTGCAGGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSHTTSDSLVTL*SLCRCGLCRIS Trigger: ACTGATCCTGCAGAGGCCACATCTGCAAAGGGACAACAAGGTTACTAGAGAGTCGGATGTTGTGTGGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS-3UTR TCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCCTTCTTGGACTCCACTaGGAACTTCTTATTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGQHSSHLSLSKSLWGPALLGLH*ELLIPN Trigger: GTTGGGAATAAGAAGTTCTCAGTGGAGTCCAAGAAG...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCACACAGTGTCGACCTCTaGACCCAAGGGGACAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPHSVDL*TQGDRG Trigger: GCCTCTGTCCCCTTGGGTTCAGAGGTCGACACTGTG...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCACCTCAGCGACTCTCTaGACTGAGGGATGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFTSATL*TEGWSG Trigger: CCCTGACCATCCCTCAGTTCAGAGAGTCGCTGAGGT...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTACGCCGGGTGGGAGGCTaGAGGCCAGGAGCAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVRRVGG*RPGARN Trigger: ATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCG...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR CAA 72 bp | AGTCTGGCTCTCACTCTTGTTAACACAACAGAGCCATaGAGCTACAGCAGAGAGTTCCCAGAGCTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLALTLVNTTEP*SYSREFPELAL Trigger: CAGTGCAAGCTCTGGGAACTCTCTGCTGTAGCTCAATGGCTCTGTTGTGTTAACAAGAGTGAGAGCCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| 3UTR CAA 72 bp | CACAACATCCGACTCTCTAGTAACCTTGTTGTCCCTTaGCAGATGTGGCCTCTGCAGGATCAGTCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HNIRLSSNLVVP*QMWPLQDQSHL Trigger: AAGGTGTGACTGATCCTGCAGAGGCCACATCTGCAAAGGGACAACAAGGTTACTAGAGAGTCGGATGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR CAA 72 bp | CCCCTTGCCAGTCTGACTGTAGGCTGCTACGCTTACTaGATATTCAGTGCCTGGCTTCAAATCTCCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLASLTVGCYAY*IFSAWLQISNH Trigger: GTGATTGGAGATTTGAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCCTACAGTCAGACTGGCAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATTCAAGGCTCCCAGCTTaGTGTCAAGAGGAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKNRVVPETNYRLFQELDSRLPA*CQEEVP Trigger: TGGGACCTCCTCTTGACATCAAGCTGGGAGCCTTGA...ATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTCGTGGAGAGAGGCTaGGGTAGGTTGGGCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPFVERG*GRLGES Trigger: AGACTCGCCCAACCTACCTCAGCCTCTCTCCACGAA...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATGGTAGCTGCGGCCGATaGACTGTGGGATCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHGSCGR*TVGSRW Trigger: CCATCGAGATCCCACAGTTCATCGGCCGCAGCTACC...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTAAATCGGTGGACAGTGTaGAATGGGAGATGCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVNRWTV*NGRCSP Trigger: TGGGCTGCATCTCCCATTTCACACTGTCCACCGATT...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACACAGAGTAACCTGAAATaGCTGATAAGAGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITQSNLK*LIRVLQ Trigger: CTGAAGAACTCTTATCAGGCATTTCAGGTTACTCTG...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGCACAGATCCCACTGCTaGACTCCCCAACATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMHRSHC*TPQHQL Trigger: GAGCTGATGTTGGGGAGTGCAGCAGTGGGATCTGTG...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCAACATTCATCTCACCTTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCTTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGQHSSHLSLSKSLWGPAFGSRK*FNLLKG Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...GGCTGGTCCCCACAAGGACTTACTAAGGGAAAGGTGAGATGAATGTTGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTAGGACTGGCCTGTCACTaGGGTGCCATTATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVGLACH*GAIIQL Trigger: CAGTTGAATAATGGCACCCCAGTGACAGGCCAGTCC...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATCATAACCCTCCTTCCTaGGCCGACAGCTGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHHNPPS*ADSCPH Trigger: ATGGGGGCAGCTGTCGGCCCAGGAAGGAGGGTTATG...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGTCCCTGTTGCTCTaGCCAGCCAGTAAGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPLSLLL*PASKHW Trigger: CCAGTGCTTACTGGCTGGTCAGAGCAACAGGGACAA...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTACAACATCAGCTCCATTaGGGGCTTTTCCTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVQHQLH*GLFLMA Trigger: GGCCATTAGGAAAAGCCCTCAATGGAGCTGATGTTG...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGGCCTGTCACTGGGGTaGCATTATTCAACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMGLSLG*HYSTAA Trigger: TGCTGCAGTTGAATAATGGCACCCCAGTGACAGGCC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATCACAGATCCCACTGCTaGACTCCCCAACATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYHRSHC*TPQHQL Trigger: GAGCTGATGTTGGGGAGTGCAGCAGTGGGATCTGTG...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTAGGTGCCCCCGTGGATaGAGGAGGCTTCGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFRCPRG*RRLRHR Trigger: TCTGTGACGAAGCCTCCTGCATCCACGGGGGCACCT...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATCCCAGGCGTAGTCATTaGCACAGAAGCTGTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHPRRSH*HRSCQL Trigger: CAGCTGACAGCTTCTGTGTCAATGACTACGCCTGGG...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCCAACATCAGCTCCATTaGGGGCTTTTCCTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFQHQLH*GLFLMA Trigger: GGCCATTAGGAAAAGCCCTCAATGGAGCTGATGTTG...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTACCTCAGCGACTCTCTaGACTGAGGGATGGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFTSATL*TEGWSG Trigger: CCCTGACCATCCCTCAGTTCAGAGAGTCGCTGAGGT...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTGGCCCGCAGCCATATTaGTGGAGAGGAAGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFGPQPY*WRGSPC Trigger: GCAAGGACTTCCTCTCCATCAATATGGCTGCGGGCC...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAGGCCTGTCACTGGGGTaGCATTATTCAACTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPGLSLG*HYSTAA Trigger: TGCTGCAGTTGAATAATGGCACCCCAGTGACAGGCC...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTTCCCATTCTTCGCTGTaGGAGACACACGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRISHSSL*ETHVGH Trigger: ATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGA...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATGACTGCACACAGCCTTaGAAGCCACGGTTTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHDCTQP*KPRFVP Trigger: AGGGACAAACCGTGGCTTCCAAGGCTGTGTGCAGTC...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGACATCATCGTAATTTaGGACTCCACCAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTLVTCYRSPDTTNGLITDIIVI*DSTNKN Trigger: ATTTTTATTGGTGGAGTCCCAAATTACGATGATGTC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATGTGACTTGCCTGTTCTaGCTCCGTAGTCATCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYVTCLF*LRSHPL Trigger: CAGTGGATGACTACGGAGCCAGAACAGGCAAGTCAC...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATGTGGACAGTGTGAAATaGGAGATGCAGCCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYVDSVK*EMQPTR Trigger: CCTTGTGGGCTGCATCTCCCATTTCACACTGTCCAC...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCTTCCCACACTCTTTCTaGCAGTTCAGGCCTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFFPHSF*QFRPSK Trigger: CTTCGAAGGCCTGAACTGCCAGAAAGAGTGTGGGAA...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096494.5 |
||
| 3UTR CAA 72 bp | CTGGAGCCCATCACTGAGTTGGAGACAGAAGTCTTCTaGGACTCCACTGAGAACTTCTTATTCCCAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEPITELETEVF*DSTENFLFPTL Trigger: CAAAGTTGGGAATAAGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 72 bp | TACAGTGTCACCGTATGCCAGGCCCCAAGTTTGATTTaGGTCTCACTTATGATGATGGCAATCCCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSVTVCQAPSLI*VSLMMMAIPVP Trigger: TGGAACTGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| 3UTR CAA 72 bp | TCTCTGTACAGTGTCACCGTATGCCAGGCCCCAAGTTaGATTTTGGTCTCACTTATGATGATGGCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLYSVTVCQAPS*ILVSLMMMAIP Trigger: TGGGATTGCCATCATCATAAGTGAGACCAAAATCAAACTTGGGGCCTGGCATACGGTGACACTGTACAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTTCAAGGCTCCCAGCTTaGTGTCAAGAGGAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCSRLPA*CQEEVP Trigger: TGGGACCTCCTCTTGACATCAAGCTGGGAGCCTTGA...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAACGGTTTGTCCCTGTTaGTCTGACCAGCCAGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVTVCPC*SDQPVS Trigger: GCTTACTGGCTGGTCAGAGCAACAGGGACAAACCGT...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATCCCGATGTAAAGTCATaGTTCACATGGATGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYPDVKS*FTWMVR Trigger: CCGGACCATCCATGTGAAGCATGACTTTACATCGGG...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR GCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTCCGTTGATGTTAAGCTaGCGCATCAAGCCCGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSPLMLS*RIKPGD Trigger: GTCACCGGGCTTGATGCGGCAGCTTAACATCAACGG...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCTCTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAGAGTAGGACTGAATTaGGGCACTTCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLLNGCCTNKNRVVPETRVGLN*GTSFIL Trigger: GAGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCT...AGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTAGGCGCTCTTGGATTATaGTCCAGCTCTTGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVGALGL*SSSCQN Trigger: ATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCC...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATAGCCGTGAGCATTCATaGCTTTCACAGCAAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKNRVVPETNYRLFQELDSREHS*LSQQTG Trigger: ACCAGTTTGCTGTGAAAGCCATGAATGCTCACGGCT...ATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTGACTGCACACAGCCTTaGAAGCCACGGTTTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCDCTQP*KPRFVP Trigger: AGGGACAAACCGTGGCTTCCAAGGCTGTGTGCAGTC...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCGTATTACACTTAATCTaGGTGAAGCCTCCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFVLHLI*VKPPSA Trigger: GGCAGAGGGAGGCTTCACCCAGATTAAGTGTAATAC...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGAATGCTCCCACTAAATaGATGGAGGATCCCCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMNAPTK*MEDPRV Trigger: AACTCGGGGATCCTCCATCCATTTAGTGGGAGCATT...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| 3UTR CAA 72 bp | TCCATCTGCAGGCGCTCTTGGATTATGGTCCAGCTCTaGTCAAAATCTAATGAATTCCACAGAGTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SICRRSWIMVQL*SKSNEFHRVGL Trigger: CAGTCCTACTCTGTGGAATTCATTAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCTTTTCCACTGGATGCTaGAAGCTGTACAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFFSTGC*KLYSSR Trigger: CCTTGAACTGTACAGCTTTCAGCATCCAGTGGAAAA...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCACCGCAGGGACTTATCTaGACCAACCTCAGAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPPQGLI*TNLRVK Trigger: TTTTACTCTGAGGTTGGTTCAGATAAGTCCCTGCGG...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGCTGCTACGCTTACTTaGTATTCAGTGCCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVAATLT*YSVPGF Trigger: GAAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGC...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATCATGTCAAAGAGCCTTaGCATCATGGCCACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYHVKEP*HHGHTV Trigger: AACAGTGTGGCCATGATGTCAAGGCTCTTTGACATG...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGACAGAAGCTGTCAGCTaGACAGAGAGTTTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMTEAVS*TESFIT Trigger: TGTGATGAAACTCTCTGTTCAGCTGACAGCTTCTGT...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAACCATGGAGTCCATCTaGAGGCGCTCTTGGATTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVTMESI*RRSWIM Trigger: CATAATCCAAGAGCGCCTGCAGATGGACTCCATGGT...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATTTGGTGTTTTCCACTaGATGCTGAAAGCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVFGVFH*MLKAVQ Trigger: CTGTACAGCTTTCAGCATCCAGTGGAAAACACCAAA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCAGAGTAGGACTGAATTaGGGCACTTCCTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFRVGLN*GTSFIL Trigger: GAGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCT...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTGGCGCTCTTGGATTATaGTCCAGCTCTTGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVVPETNYRLFQELDRIGALGL*SSSCQN Trigger: ATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCC...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAAGCCGTGAGCATTCATaGCTTTCACAGCAAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPSREHS*LSQQTG Trigger: ACCAGTTTGCTGTGAAAGCCATGAATGCTCACGGCT...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATAATAAAGATATCTTCTaGGCAGGCCTCGCCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYNKDIF*AGLASF Trigger: AAAGGAGGCGAGGCCTGCTCAGAAGATATCTTTATT...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTACCCATTAACAGAAAGTaGCTGCACACAGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVPINRK*LHTALE Trigger: TTCCAAGGCTGTGTGCAGTCACTTTCTGTTAATGGG...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAATGGATGCTGCACAAACAAGAATAGAGTCGTGCCTGAGACTAATTATTCCCCGAGTTCTTCTTaGCATCATCGTAATTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLNGCCTNKNRVVPETNYSPSSS*HHRNLG Trigger: TCCCAAATTACGATGATGTCAAGAAGAACTCGGGGA...ATAATTAGTCTCAGGCACGACTCTATTCTTGTTTGTGCAGCATCCATTCAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR GCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTACCATGGAGTCCATCTaGAGGCGCTCTTGGATTATG | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSTMESI*RRSWIM Trigger: CATAATCCAAGAGCGCCTGCAGATGGACTCCATGGT...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTTCCCATTCTTCGCTGTaGGAGACACACGTAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSSHSSL*ETHVGH Trigger: ATGACCTACGTGTGTCTCGCACAGCGAAGAATGGGA...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCCCTCTACCACCTTCTaGTTGTCCACCTGTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCPSTTF*LSTCKI Trigger: GATCTTACAGGTGGACAAGCAGAAGGTGGTAGAGGG...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATGCTACCAGAACGCTTTaGTGTTTTCCACTGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHATRTL*CFPLDA Trigger: AGCATCCAGTGGAAAACACCAAAGCGTTCTGGTAGC...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATTGATATTCAGTGCCTaGCTTCAAATCTCCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVLIFSA*LQISNH Trigger: GTGATTGGAGATTTGAAGCCAGGCACTGAATATCAA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCAGACAGAAGTCTTCTTaGACTCCACTGAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFRQKSS*TPLRTS Trigger: AGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCT...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTCCGCAGGGACTTATCTaGACCAACCTCAGAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSPQGLI*TNLRVK Trigger: TTTTACTCTGAGGTTGGTTCAGATAAGTCCCTGCGG...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTCATGTCAAAGAGCCTTaGCATCATGGCCACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFHVKEP*HHGHTV Trigger: AACAGTGTGGCCATGATGTCAAGGCTCTTTGACATG...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCCCATTAACAGAAAGTaGCTGCACACAGCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCPINRK*LHTALE Trigger: TTCCAAGGCTGTGTGCAGTCACTTTCTGTTAATGGG...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTCCCCGAGTTCTTCTTaGCATCATCGTAATTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHSPSSS*HHRNLG Trigger: TCCCAAATTACGATGATGTCAAGAAGAACTCGGGGA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGTATTGTCTGTTCGTGTaGAGAGCGATTTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMYCLFV*RAISFI Trigger: AATGAAGGAAATCGCTCTGCACACGAACAGACAATA...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAAGACAGAAGTCTTCTTaGACTCCACTGAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPRQKSS*TPLRTS Trigger: AGAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCT...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATCTATAATAGCTTTCTaGCAGTTCAGGCCTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPSIIAF*QFRPSK Trigger: CTTCGAAGGCCTGAACTGCCAGAAAGCTATTATAGA...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| 3UTR CAA 72 bp | ATCTCTCCACTTTTGGACAGCATCATATTCATCCACTaGAACCGTCAGCATATACTAAAAGAGAATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPLLDSIIFIH*NRQHILKENGP Trigger: GGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTTCTTGGACTCCACTaGGAACTTCTTATTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCLLGLH*ELLIPN Trigger: GTTGGGAATAAGAAGTTCTCAGTGGAGTCCAAGAAG...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGCTCTTGTCAAAATCTaGTCTAATGAATTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPLEPSAYTKREWSLLPMALVKI*SNEFHR Trigger: TCTGTGGAATTCATTAGACCAGATTTTGACAAGAGC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTACTGGTAGTTGGTATCTaGATCAAGGCCTTTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVLVVGI*IKAFDN Trigger: GTTATCAAAGGCCTTGATCCAGATACCAACTACCAG...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTATTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVFGSRK*FNLLKG Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTTTGAGGATGATCTTCTaGATGCTCCCACTAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFLRMIF*MLPLNG Trigger: TCCATTTAGTGGGAGCATTCAGAAGATCATCCTCAA...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTATTGTCTGTTCGTGTaGAGAGCGATTTCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LISPLLDSIIFIHLNRQHYCLFV*RAISFI Trigger: AATGAAGGAAATCGCTCTGCACACGAACAGACAATA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAGCTCTTGTCAAAATCTaGTCTAATGAATTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPALVKI*SNEFHR Trigger: TCTGTGGAATTCATTAGACCAGATTTTGACAAGAGC...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTGGTAGTTGGTATCTaGATCAAGGCCTTTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSRNILILFGGVVSLSLCLVVGI*IKAFDN Trigger: GTTATCAAAGGCCTTGATCCAGATACCAACTACCAG...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CCA 90 bp | AACAAGAATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATGACATCATCGTAATTTaGGACTCCACCAATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKNRVVPETNYRLFQELDDIIVI*DSTNKN Trigger: ATTTTTATTGGTGGAGTCCCAAATTACGATGATGTC...ATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATTCTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTCCTCTTGAGGATATTTaGGTTGTCATACGTCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSPLEDI*VVIRQV Trigger: TACCTGACGTATGACAACCCAAATATCCTCAAGAGG...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTATTACTTGATATTCAGTaGCTGGCTTCAAATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVLLDIQ*LASNLQ Trigger: TTGGAGATTTGAAGCCAGGCACTGAATATCAAGTAA...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTCAGAGTAACCTGAAATaGCTGATAAGAGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFQSNLK*LIRVLQ Trigger: CTGAAGAACTCTTATCAGGCATTTCAGGTTACTCTG...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR GCA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTTTACTTGATATTCAGTaGCTGGCTTCAAATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNILILFGGVVSLSLCLSLLDIQ*LASNLQ Trigger: TTGGAGATTTGAAGCCAGGCACTGAATATCAAGTAA...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTAGGGTTCGGACGGTGTaGCTGGGCCAGCTGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTRVRTV*LGQLRG Trigger: TCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCCT...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCAGGGTTCGGACGGTGTaGCTGGGCCAGCTGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSRVRTV*LGQLRG Trigger: TCCGCGCAGCTGGCCCAGCAACACCGTCCGAACCCT...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCCTCCTTTGCCCAGGTaGCAATGGCATCGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSPPLPR*QWHREP Trigger: GGGCTCACGATGCCATTGCAACCTGGGCAAAGGAGG...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | GGTCCCTTCTCCCAATGGCCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTTCTACCACCTTCTGCTaGTCCACCTGTAAGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPFSQWPTLVTCYRSPDTSTTFC*STCKIP Trigger: TGGGATCTTACAGGTGGACAAGCAGAAGGTGGTAGA...AGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGGCCATTGGGAGAAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCGTTAGCAGAGAAGGCCACCCAGGGCCTTCAGTCTTGGCTCTCACCATTAGCCCCACAAGTGTaGATGTTCTTCCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: HRALAEKATQGLQSWLSPLAPQV*MFFPST Trigger: CGTGGATGGGAAGAACATCAACACTTGTGGGGCTAA...TGGTGAGAGCCAAGACTGAAGGCCCTGGGTGGCCTTCTCTGCTAACGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACATTCAAGGCTCCCAGCTaGATGTCAAGAGGAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PTLVTCYRSPDTTNGLITFKAPS*MSRGGP Trigger: GGGACCTCCTCTTGACATCAAGCTGGGAGCCTTGAA...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCCTTGGGCAGAGTAGGACTGAATaGGGGCACTTCCTTCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAGSPGLCDCRIEAMSLGQSRTE*GHFLHS Trigger: AGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCTG...CCCAAGGGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | CAGCATCAGGCAGGGTCTCCGGGCCTCTGTGATTGCAGGATAGAGGCTATGTCCTTAGCCCCACAAGTGTaGATGTTCTTCCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: QHQAGSPGLCDCRIEAMSLAPQV*MFFPST Trigger: CGTGGATGGGAAGAACATCAACACTTGTGGGGCTAA...GGACATAGCCTCTATCCTGCAATCACAGAGGCCCGGAGACCCTGCCTGATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTTAGTAAGTCCTTGTGGGGACCAGCCAGGGAGCCAGCTGTCTGCAGTCCCAACATCAGCTCCATaGAGGGCTTTTCCTAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPLVSPCGDQPGSQLSAVPTSAP*RAFPNG Trigger: GCCATTAGGAAAAGCCCTCAATGGAGCTGATGTTGG...GACTGCAGACAGCTGGCTCCCTGGCTGGTCCCCACAAGGACTTACTAAGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CAA 90 bp | CCCACCCTAGTCACTTGCTACCGCTCCCCTGACACTACAAATGGCCTGATCACAGATCCAGACACCCTCTaGAGGATATTTGGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTLVTCYRSPDTTNGLITDPDTL*RIFGLS Trigger: TGACAACCCAAATATCCTCAAGAGGGTGTCTGGATC...TGTGATCAGGCCATTTGTAGTGTCAGGGGAGCGGTAGCAAGTGACTAGGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCCCTCCTTTGCCCAGGTaGCAATGGCATCGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFPPLPR*QWHREP Trigger: GGGCTCACGATGCCATTGCAACCTGGGCAAAGGAGG...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS CCA 90 bp | CATCTGCAGGCGCTCTTGGATTATGGTCCAGCTCTTGTCAAAATCTaGTCTAATGAATTCCACAGAGTAGGACTGAATTGGGGCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLQALLDYGPALVKI*SNEFHRVGLNWGTS Trigger: GGAAGTGCCCCAATTCAGTCCTACTCTGTGGAATTCATTAGACCAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | AATAGAGTCGTGCCTGAGACTAATTATAGGCTCTTCCAGGAGCTGGATCGTATTGGGCAGGCAGGAATCTaGAGACAAAGTGGTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: NRVVPETNYRLFQELDRIGQAGI*RQSGHM Trigger: CATGTGACCACTTTGTCTCAAGATTCCTGCCTGCCC...AATACGATCCAGCTCCTGGAAGAGCCTATAATTAGTCTCAGGCACGACTCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
||
| CDS-3UTR CAA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTGTTCTTCCCCTTCCGTaGGGCTGGTGTGGGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFVLPLP*GWCGWD Trigger: ATCCCACCCACACCAGCCCAACGGAAGGGGAAGAAC...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTGTTCTTCCCCTTCCGTaGGGCTGGTGTGGGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSRNILILFGGVVSLSLCVLPLP*GWCGWD Trigger: ATCCCACCCACACCAGCCCAACGGAAGGGGAAGAAC...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS CCA 90 bp | CTTGTCAAAATCTGGTCTAATGAATTCCACAGAGTAGGACTGAATTaGGGCACTTCCTTCATTCTCTCCAGGTCTCCAAGAAAGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LVKIWSNEFHRVGLN*GTSFILSRSPRKGH Trigger: GTGGCCCTTTCTTGGAGACCTGGAGAGAATGAAGGAAGTGCCCCAATTCAGTCCTACTCTGTGGAATTCATTAGACCAGATTTTGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS CCA 90 bp | GGATCAAGGCCTTTGATAACCATGGAGTCCATCTGCAGGCGCTCTTaGATTATGGTCCAGCTCTTGTCAAAATCTGGTCTAATGAATTCC | + |
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Preference number: 5 (lower is better) Translates to: GSRPLITMESICRRS*IMVQLLSKSGLMNS Trigger: GGAATTCATTAGACCAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGGCTGCTACGCTTACTaGATATTCAGTGCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: HPLEPSAYTKREWSLLPMGCYAY*IFSAWL Trigger: AAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CATCCACTTGAACCGTCAGCATATACTAAAAGAGAATGGTCCCTTCTCCCAATGGAGCCCATCACTGAGTaGGAGACAGAAGTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: HPLEPSAYTKREWSLLPMEPITE*ETEVFL Trigger: CAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTC...CATTGGGAGAAGGGACCATTCTCTTTTAGTATATGCTGACGGTTCAAGTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAACGTACAGAGCACCGTaGATGTTAAGCTGCCGCATC | + |
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Preference number: 5 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPTYRAP*MLSCRI Trigger: GATGCGGCAGCTTAACATCAACGGTGCTCTGTACGT...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTTTCAAGGCTCCCAGCTaGATGTCAAGAGGAGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFFKAPS*MSRGGP Trigger: GGGACCTCCTCTTGACATCAAGCTGGGAGCCTTGAA...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | TTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATTGGGTTCGGTTCGAGACAGAAGTCTTCTaGGACTCCACTGAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LNNKVQCFLTTVVHWVRFETEVF*DSTENF Trigger: GAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTC...GAACCGAACCCAATGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAGAGCCCATCACTGAGTaGGAGACAGAAGTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPEPITE*ETEVFL Trigger: CAAGAAGACTTCTGTCTCCAACTCAGTGATGGGCTC...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCATCTGGATCAAGGCCTTaGATAACCATGGAGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPSGSRP*ITMESI Trigger: GATGGACTCCATGGTTATCAAAGGCCTTGATCCAGA...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | CAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGTCCAGAGACAGAAGTCTTCTaGGACTCCACTGAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: QTLYVEQQSPMLPNHSSPETEVF*DSTENF Trigger: GAAGTTCTCAGTGGAGTCCAAGAAGACTTCTGTCTC...TGGACTACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATCCAACATCAGCTCCATaGAGGGCTTTTCCTAATGGC | + |
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Preference number: 5 (lower is better) Translates to: LISPLLDSIIFIHLNRQHPTSAP*RAFPNG Trigger: GCCATTAGGAAAAGCCCTCAATGGAGCTGATGTTGG...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTACGTACAGAGCACCGTaGATGTTAAGCTGCCGCATC | + |
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Preference number: 5 (lower is better) Translates to: KSRNILILFGGVVSLSLCTYRAP*MLSCRI Trigger: GATGCGGCAGCTTAACATCAACGGTGCTCTGTACGT...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTGGCTGCTACGCTTACTaGATATTCAGTGCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RNILILFGGVVSLSLCLSGCYAY*IFSAWL Trigger: AAGCCAGGCACTGAATATCAAGTAAGCGTAGCAGCC...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | TTAATCTCTCCACTTTTGGACAGCATCATATTCATCCACTTGAACCGTCAGCATTCTGGATCAAGGCCTTaGATAACCATGGAGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LISPLLDSIIFIHLNRQHSGSRP*ITMESI Trigger: GATGGACTCCATGGTTATCAAAGGCCTTGATCCAGA...ATGCTGACGGTTCAAGTGGATGAATATGATGCTGTCCAAAAGTGGAGAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | AGCAGGGCATGGAAGGGGTTAATCTACACAATCCATAGACCGAGATTGGAAGTATTCTTATTCCCAACTTaGGTAGCAGGAAGTGGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SRAWKGLIYTIHRPRLEVFLFPT*VAGSGL Trigger: TAAACCACTTCCTGCTACCAAAGTTGGGAATAAGAA...TACTTCCAATCTCGGTCTATGGATTGTGTAGATTAACCCCTTCCATGCCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | ATTAGAGGAAAGCTTGGGGGAAGGATGCCACAGTCTGATTATTATTCTATGTTTTCTACCACCTTCTGCTaGTCCACCTGTAAGATCCCA | + |
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Preference number: 5 (lower is better) Translates to: IRGKLGGRMPQSDYYSMFSTTFC*STCKIP Trigger: TGGGATCTTACAGGTGGACAAGCAGAAGGTGGTAGA...AAACATAGAATAATAATCAGACTGTGGCATCCTTCCCCCAAGCTTTCCTCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | TCTCTCAGACTCTATACGTTGAACAACAAAGTCCAATGCTTCCTAACCACAGTAGCCCCAAGTTTGATTTaGGTCTCACTTATGATGATG | + |
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Preference number: 5 (lower is better) Translates to: SLRLYTLNNKVQCFLTTVAPSLI*VSLMMM Trigger: CATCATCATAAGTGAGACCAAAATCAAACTTGGGGC...TACTGTGGTTAGGAAGCATTGGACTTTGTTGTTCAACGTATAGAGTCTGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | AGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTCTCTCTGCCCCAAGTTTGATTTaGGTCTCACTTATGATGATG | + |
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Preference number: 5 (lower is better) Translates to: RNILILFGGVVSLSLCLSAPSLI*VSLMMM Trigger: CATCATCATAAGTGAGACCAAAATCAAACTTGGGGC...AGAGAGACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS-3UTR CAA 90 bp | AAGAGCAGAAATATTTTAATACTATTTGGAGGGGTGGTCTCTCTGTCTCTCTGTTTCTTATTCCCAACTTaGGTAGCAGGAAGTGGTTTA | + |
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Preference number: 5 (lower is better) Translates to: KSRNILILFGGVVSLSLCFLFPT*VAGSGL Trigger: TAAACCACTTCCTGCTACCAAAGTTGGGAATAAGAA...ACAGAGAGACAGAGAGACCACCCCTCCAAATAGTATTAAAATATTTCTGCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS GCA 72 bp | GAGCCGTTCGGAGTGACACAGCGCCGGGTGGGAGGCTaGAGGCCAGGAGCAAGAAATGGAGCGAGAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: EPFGVTQRRVGG*RPGARNGARRL Trigger: CAACCTTCTCGCTCCATTTCTTGCTCCTGGCCTGCAGCCTCCCACCCGGCGCTGTGTCACTCCGAACGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 ENSMUST00000160207.8 |
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| CDS CAA 90 bp | GTACAGTTCAAGGCTCCCAGCTTGATGTCAAGAGGAGGTCCCACCTaGCCTGATTTTCGCAGAGCCGTTCGGAGTGACACAGCGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: VQFKAPSLMSRGGPT*PDFRRAVRSDTAPG Trigger: ACCCGGCGCTGTGTCACTCCGAACGGCTCTGCGAAAATCAGGCAAGGTGGGACCTCCTCTTGACATCAAGCTGGGAGCCTTGAACTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS CAA 72 bp | AAGGCTCCCAGCTTGATGTCAAGAGGAGGTCCCACCTaGCCTGATTTTCGCAGAGCCGTTCGGAGTGACACA | + |
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Preference number: 6 (lower is better) Translates to: KAPSLMSRGGPT*PDFRRAVRSDT Trigger: TGTGTCACTCCGAACGGCTCTGCGAAAATCAGGCAAGGTGGGACCTCCTCTTGACATCAAGCTGGGAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS CCA 72 bp | GTTGTCATACGTCAGGTAGCTGCGGCCGATGAACTGTaGGATCTCGATGGCTTCTATAATAGCTTTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VVIRQVAAADEL*DLDGFYNSFLA Trigger: TGCCAGAAAGCTATTATAGAAGCCATCGAGATCCCACAGTTCATCGGCCGCAGCTACCTGACGTATGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058593.10 |
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| CDS CAA 72 bp | GCCTTTGATAACCATGGAGTCCATCTGCAGGCGCTCTaGGATTATGGTCCAGCTCTTGTCAAAATCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: AFDNHGVHLQAL*DYGPALVKIWS Trigger: AGACCAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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| CDS CAA 90 bp | TGGATCAAGGCCTTTGATAACCATGGAGTCCATCTGCAGGCGCTCTaGGATTATGGTCCAGCTCTTGTCAAAATCTGGTCTAATGAATTC | + |
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Preference number: 6 (lower is better) Translates to: WIKAFDNHGVHLQAL*DYGPALVKIWSNEF Trigger: GAATTCATTAGACCAGATTTTGACAAGAGCTGGACCATAATCCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058593.10 ENSMUST00000096494.5 |
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